Rroxscaffold_1G00036670

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0017741
Physical Location & Seq
Reverse (-)
53500914 .. 53503402
2489 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00036670.1

Sequence Viewer

Length: 1953 bp
ATGACAGTCACCGCAGTCTCTCCCTTAATGCTTGTCACCCAAACCCTCCCATTGTTAGAGAAATGCAAAACCATAACTGAACTGCGCCAGCTTCACGCCCACATAGTCAAAACAAACCTCGTCAACCATACATCCACCATAACCAAACTCATTTCCCTTTGCTCCCACCATGGTGCCCTAGACCATGCTCTTTCAGTCTTTCATCGAATCCCGGACCCCAACCCCTTCATCTTTTTCTCACTCATAAAGCAAATGTCCGAGAGTTCAAGTCCAACAGAAGCTGTACTCTTCTATGCTCACATGCTCTCTTCTTTGGAAAATTTGAACGGGGTCGAGTTTTTGCTCCCTGCATTGCTCAAAGCGTGCAGCAAGTCACGTTCTTTTGAGGAGGGGAGGCAAGTTCATGGCCAGATATTGAAAACCCAGATGTTGTTTGATCCGTATGTTGCGAATGCATTGATTAGGTTGTACTCGGAGCTGGGATGTATTGGATTGGCACACAGGGTGTTTGATAAAATGGCTCAGAGAGACCAAGTTTCTTGGAATTCACTGATTACTGGTTATTTGAGGGTAGGGGAGGTTGAGTTGGCTCGTGCGATTTTTAATGAGATTCCGGAGAGGGACTTGGTTTCGTGTAATGCAATGATTGATGGGTATGGGAAGAGTGGCAAGTGTGAGCTTGCTGAGGAGGTTTTTAGGACAATGCATGGTAAAGATGTGGTTACTTGGACGTCAATGGTTTCAGGGTATGTATTCAATCACCGTCCGAAGGAAGCAATGGGTTTGTTTAGGGAAATGTTGAGTCAGGGCATTCGGCCTGATGCCCCTTCTCTTGTTAGTGTTCTCTCAGCCATTGCCGACTTGGGTTTCGTTGAGGAAGGCAAATGGGTGCATGCTTATATTTGTACGAATAAGATTAGGTTGAATTCAGGGTTTATTGGATCAGCTCTTATAGATATGTATGCTAAATGTGGGCATATAGAGAATGCTTACCATGTCTTTCAAAACATAGCTCATTATAGGAACATTGGGGACTGGAATTGCATGATCTCTGGCCTTGCTATGCATGGCCTAGGTCATGAAGTGCTGGACATTTTCCTTGACATGAAAATGAAAGAAATTGAGCCTGATGAGATCACTTTCTTGGGACTTCTTACTGCTTGTAACCATGGAGGTCTAGTTGATGAGGGTAGATACTGTTTTGAACTCATGCAGGAGAAGTACGGACTTGTTCCTAAGATTCAGCATTATGGATGCATTATTGATCTTTTAGGTAGAGCAGGGCACTTGGAGGAGGCAGTTGACGTTATACAGAATATGCCAATAGAGGCGGATGCTATAGTTTGGAAGGCAATTCTCAGCGCATGCACGATTCATGGTAATGTTGCAATTGGGGAAAGTGCTGCCCTCAAGGCAATAGATTTGGCTCCGGATGACTCAAGTTGTTACATTCTCCTCTCGAATCTTTATGCCAAAGTAGGGAGATGGGATGATGTGGGCAATGTTAGATTGATGATGAAACAGAGGGGAGTTCGAAAGATTCCAGGGTCAAGTTCAGTACTTGTGAATGGAAAGGTTCATGAATTCCTTGTGGGGAAGGAAATGAATGTTAAATACAGTGTTGAGGTTCGTACCAAGATAGAGGAGGTCGTCTCTAGGTTGAAATTGGAAGGATACAAACCTGATTTGTCTCAAGTCCTTTTGGATATTGGAGAGGAGAGCAAAGAGGACTCACTTATTCTACACAGCGAGAAGATGGCCCTTGCATTTGGACTAATAAACACAAGCAAGGGTTCTCCTATTCACATAGTGAAGAACTTAAGGATTTGTTGTGATTGCCATTCATTTATCAAGCTGGTTTCTGGAGTTTATAATTGTCGAATTGTTGTGAGAGACCAAAACCGTTTCCATCAATTTGAGAATGGTTCCTGTTCCTGCAAAAACTTCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

650

Amino Acids

72.59

Weight (kDa)

6.46

Isoelectric Point (pI)

40.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 210 - 239 4.5e-07 PPR repeat
PPR_2 PF13041 238 - 283 3.5e-09 PPR repeat family
PPR PF01535 241 - 271 1.5e-07 PPR repeat
PPR_2 PF13041 346 - 388 2e-08 PPR repeat family
E_motif PF20431 459 - 520 4.1e-17 E motif
DYW_deaminase PF14432 558 - 650 4.9e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017741)

Species Orthologous Gene IDs
malus_domestica MD11G1163700.v1.1
pyrus_communis pycom11g13520
rosa_chinensis RchiOBHm_Chr5g0044291
rosa_laevigata RLG00000034263
rosa_multiflora Rmu_sc0015666.1_g000004
rosa_roxburghii Rroxscaffold_1G00036670
rosa_rugosa Rorug05G0212900
rosa_samantha Rh5AG297500 Rh5BG304800 Rh5CG331700 Rh5DG314000
rosa_wichuraiana Rw5G027530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1872
AatII GACGTC 1 cut(s) 734
AccB1I GGYRCC 1 cut(s) 173
AccIII TCCGGA 2 cut(s) 613, 1429
AciI CCGC 2 cut(s) 12, 1331
AclWI GGATC 2 cut(s) 431, 949
AcoI YGGCCR 1 cut(s) 406
AcsI RAATTY 4 cut(s) 319, 544, 925, 1583
AcyI GRCGYC 1 cut(s) 731
AdeI CACNNNGTG 2 cut(s) 505, 1810
AfaI GTAC 6 cut(s) 285, 470, 907, 1223, 1560, 1633
AfiI CCNNNNNNNGG 2 cut(s) 769, 1479
AflII CTTAAG 1 cut(s) 1819
AgsI TTSAA 8 cut(s) 267, 325, 418, 757, 925, 1004, 1205, 1663
AjnI CCWGG 1 cut(s) 1543
AleI CACNNNNGTG 1 cut(s) 171
AluBI AGCT 7 cut(s) 91, 281, 478, 679, 947, 1013, 1855
AluI AGCT 7 cut(s) 91, 281, 478, 679, 947, 1013, 1855
Alw26I GTCTC 5 cut(s) 22, 522, 1657, 1695, 1887
AlwI GGATC 2 cut(s) 431, 949
AlwNI CAGNNNCTG 1 cut(s) 281
Aor13HI TCCGGA 2 cut(s) 613, 1429
AoxI GGCC 5 cut(s) 406, 815, 1054, 1069, 1758
ApeKI GCWGC 2 cut(s) 366, 1403
ApoI RAATTY 4 cut(s) 319, 544, 925, 1583
ArsI GACNNNNNNTTYG 2 cut(s) 851, 883
AspA2I CCTAGG 1 cut(s) 1072
AspLEI GCGC 2 cut(s) 87, 1364
AspS9I GGNCC 2 cut(s) 214, 1759
AsuC2I CCSGG 1 cut(s) 212
AsuHPI GGTGA 2 cut(s) 28, 752
AsuII TTCGAA 1 cut(s) 1534
AvaII GGWCC 1 cut(s) 214
AvrII CCTAGG 1 cut(s) 1072
BaeGI GKGCMC 2 cut(s) 178, 1287
BalI TGGCCA 1 cut(s) 408
BanI GGYRCC 1 cut(s) 173
BauI CACGAG 1 cut(s) 591
BbvCI CCTCAGC 1 cut(s) 684
BbvI GCAGC 2 cut(s) 378, 1390
BccI CCATC 4 cut(s) 644, 1479, 1750, 1917
BciT130I CCWGG 1 cut(s) 1545
BciVI GTATCC 1 cut(s) 1667
BcnI CCSGG 1 cut(s) 212
BcoDI GTCTC 5 cut(s) 22, 522, 1657, 1695, 1887
BfaI CTAG 4 cut(s) 179, 1073, 1178, 1656
BfmI CTRYAG 1 cut(s) 1338
BfrI CTTAAG 1 cut(s) 1819
BfuI GTATCC 1 cut(s) 1667
BglI GCCNNNNNGGC 1 cut(s) 1412
BisI GCNGC 2 cut(s) 367, 1404
BlnI CCTAGG 1 cut(s) 1072
BlsI GCNGC 2 cut(s) 368, 1405
BmcAI AGTACT 1 cut(s) 1560
Bme1390I CCNGG 2 cut(s) 212, 1545
Bme18I GGWCC 1 cut(s) 214
BmgT120I GGNCC 2 cut(s) 214, 1759
BmiI GGNNCC 4 cut(s) 175, 216, 1428, 1927
BmrFI CCNGG 2 cut(s) 212, 1545
BmsI GCATC 3 cut(s) 811, 1244, 1324
BplI GAGNNNNNCTC 2 cut(s) 1637, 1669
BpmI CTGGAG 1 cut(s) 1884
Bpu10I CCTNAGC 1 cut(s) 684
Bpu14I TTCGAA 1 cut(s) 1534
BpuEI CTTGAG 3 cut(s) 1394, 1423, 1677
BpuMI CCSGG 1 cut(s) 212
BsaHI GRCGYC 1 cut(s) 731
BsaI GGTCTC 2 cut(s) 522, 1887
BsaJI CCNNGG 4 cut(s) 169, 1072, 1168, 1544
BsaWI WCCGGW 2 cut(s) 613, 1429
BsaXI ACNNNNNCTCC 4 cut(s) 569, 599, 1164, 1194
Bsc4I CCNNNNNNNGG 2 cut(s) 769, 1479
Bse1I ACTGG 2 cut(s) 562, 1040
Bse3DI GCAATG 5 cut(s) 350, 648, 783, 852, 1507
BseAI TCCGGA 2 cut(s) 613, 1429
BseBI CCWGG 1 cut(s) 1545
BseDI CCNNGG 4 cut(s) 169, 1072, 1168, 1544
BseGI GGATG 6 cut(s) 131, 488, 1259, 1339, 1438, 1495
BseLI CCNNNNNNNGG 2 cut(s) 769, 1479
BseMI GCAATG 5 cut(s) 350, 648, 783, 852, 1507
BseMII CTCAG 4 cut(s) 536, 675, 861, 1372
BseNI ACTGG 2 cut(s) 562, 1040
BseRI GAGGAG 6 cut(s) 401, 701, 1307, 1445, 1658, 1730
BseSI GKGCMC 2 cut(s) 178, 1287
BseXI GCAGC 2 cut(s) 378, 1390
BseYI CCCAGC 1 cut(s) 478
BsgI GTGCAG 1 cut(s) 385
BshFI GGCC 5 cut(s) 408, 817, 1056, 1071, 1760
BshNI GGYRCC 1 cut(s) 173
BsiSI CCGG 3 cut(s) 212, 614, 1430
BslFI GGGAC 3 cut(s) 635, 1046, 1161
BslI CCNNNNNNNGG 2 cut(s) 769, 1479
BsmAI GTCTC 5 cut(s) 22, 522, 1657, 1695, 1887
BsmBI CGTCTC 1 cut(s) 1657
BsmFI GGGAC 3 cut(s) 635, 1046, 1161
BsmI GAATGC 3 cut(s) 457, 810, 991
BsnI GGCC 5 cut(s) 408, 817, 1056, 1071, 1760
Bso31I GGTCTC 2 cut(s) 522, 1887
Bsp119I TTCGAA 1 cut(s) 1534
Bsp1286I GDGCHC 2 cut(s) 178, 1287
Bsp13I TCCGGA 2 cut(s) 613, 1429
Bsp143I GATC 5 cut(s) 436, 941, 1047, 1134, 1264
Bsp19I CCATGG 2 cut(s) 169, 1168
BspACI CCGC 2 cut(s) 12, 1331
BspANI GGCC 5 cut(s) 408, 817, 1056, 1071, 1760
BspCNI CTCAG 4 cut(s) 535, 676, 860, 1371
BspEI TCCGGA 2 cut(s) 613, 1429
BspHI TCATGA 2 cut(s) 1078, 1579
BspLI GGNNCC 4 cut(s) 175, 216, 1428, 1927
BspPI GGATC 2 cut(s) 431, 949
BspT104I TTCGAA 1 cut(s) 1534
BspT107I GGYRCC 1 cut(s) 173
BspTI CTTAAG 1 cut(s) 1819
BspTNI GGTCTC 2 cut(s) 522, 1887
BsrDI GCAATG 5 cut(s) 350, 648, 783, 852, 1507
BsrI ACTGG 2 cut(s) 562, 1040
BssECI CCNNGG 4 cut(s) 169, 1072, 1168, 1544
BssMI GATC 5 cut(s) 436, 941, 1047, 1134, 1264
BssNI GRCGYC 1 cut(s) 731
BssSI CACGAG 1 cut(s) 591
BssT1I CCWWGG 3 cut(s) 169, 1072, 1168
Bst2BI CACGAG 1 cut(s) 591
Bst2UI CCWGG 1 cut(s) 1545
Bst4CI ACNGT 5 cut(s) 7, 764, 1199, 1619, 1904
Bst6I CTCTTC 3 cut(s) 293, 313, 656
BstACI GRCGYC 1 cut(s) 731
BstAFI CTTAAG 1 cut(s) 1819
BstBI TTCGAA 1 cut(s) 1534
BstC8I GCNNGC 5 cut(s) 89, 364, 681, 894, 1366
BstDEI CTNAG 5 cut(s) 522, 684, 847, 1236, 1358
BstDSI CCRYGG 2 cut(s) 169, 1168
BstF5I GGATG 6 cut(s) 131, 488, 1259, 1339, 1438, 1495
BstHHI GCGC 2 cut(s) 87, 1364
BstKTI GATC 5 cut(s) 439, 944, 1050, 1137, 1267
BstMAI GTCTC 5 cut(s) 22, 522, 1657, 1695, 1887
BstMBI GATC 5 cut(s) 436, 941, 1047, 1134, 1264
BstMWI GCNNNNNNNGC 1 cut(s) 1412
BstNI CCWGG 1 cut(s) 1545
BstNSI RCATGY 3 cut(s) 304, 896, 1368
BstSCI CCNGG 2 cut(s) 210, 1543
BstSFI CTRYAG 1 cut(s) 1338
BstSLI GKGCMC 2 cut(s) 178, 1287
BstV1I GCAGC 2 cut(s) 378, 1390
BsuI GTATCC 1 cut(s) 1667
BsuRI GGCC 5 cut(s) 408, 817, 1056, 1071, 1760
BtgI CCRYGG 2 cut(s) 169, 1168
BtsCI GGATG 6 cut(s) 131, 488, 1259, 1339, 1438, 1495
BtsIMutI CAGTG 2 cut(s) 548, 1624
Cac8I GCNNGC 5 cut(s) 89, 364, 681, 894, 1366
CaiI CAGNNNCTG 1 cut(s) 281
CciI TCATGA 2 cut(s) 1078, 1579
CfoI GCGC 2 cut(s) 87, 1364
Cfr13I GGNCC 2 cut(s) 214, 1759
Csp6I GTAC 6 cut(s) 284, 469, 906, 1222, 1559, 1632
CviQI GTAC 6 cut(s) 284, 469, 906, 1222, 1559, 1632
DdeI CTNAG 5 cut(s) 522, 684, 847, 1236, 1358
DpnI GATC 5 cut(s) 438, 943, 1049, 1136, 1266
DpnII GATC 5 cut(s) 436, 941, 1047, 1134, 1264
DraIII CACNNNGTG 2 cut(s) 505, 1810
EaeI YGGCCR 1 cut(s) 406
Eam1104I CTCTTC 3 cut(s) 293, 313, 656
EarI CTCTTC 3 cut(s) 293, 313, 656
EciI GGCGGA 1 cut(s) 1346
Eco130I CCWWGG 3 cut(s) 169, 1072, 1168
Eco31I GGTCTC 2 cut(s) 522, 1887
Eco47I GGWCC 1 cut(s) 214
EcoRI GAATTC 3 cut(s) 544, 925, 1583
EcoRII CCWGG 1 cut(s) 1543
EcoT14I CCWWGG 3 cut(s) 169, 1072, 1168
EcoT22I ATGCAT 4 cut(s) 457, 708, 1068, 1259
ErhI CCWWGG 3 cut(s) 169, 1072, 1168
Esp3I CGTCTC 1 cut(s) 1657
FaqI GGGAC 3 cut(s) 635, 1046, 1161
Fnu4HI GCNGC 2 cut(s) 367, 1404
FokI GGATG 6 cut(s) 118, 495, 1266, 1346, 1445, 1502
Fsp4HI GCNGC 2 cut(s) 367, 1404
FspBI CTAG 4 cut(s) 179, 1073, 1178, 1656
GlaI GCGC 2 cut(s) 86, 1363
GluI GCNGC 2 cut(s) 367, 1404
GsaI CCCAGC 1 cut(s) 482
GsuI CTGGAG 1 cut(s) 1884
HaeIII GGCC 5 cut(s) 408, 817, 1056, 1071, 1760
HapII CCGG 3 cut(s) 212, 614, 1430
HhaI GCGC 2 cut(s) 87, 1364
Hin1I GRCGYC 1 cut(s) 731
Hin6I GCGC 2 cut(s) 85, 1362
HinP1I GCGC 2 cut(s) 85, 1362
HincII GTYRAC 2 cut(s) 124, 1303
HindII GTYRAC 2 cut(s) 124, 1303
HinfI GANTC 9 cut(s) 207, 610, 802, 1240, 1372, 1436, 1462, 1540, 1730
HpaII CCGG 3 cut(s) 212, 614, 1430
HphI GGTGA 2 cut(s) 28, 752
Hpy166II GTNNAC 2 cut(s) 124, 1303
Hpy188I TCNGA 4 cut(s) 259, 475, 525, 768
Hpy188III TCNNGA 6 cut(s) 614, 1079, 1430, 1459, 1580, 1863
Hpy8I GTNNAC 2 cut(s) 124, 1303
HpyAV CCTTC 7 cut(s) 235, 763, 837, 872, 1342, 1591, 1664
HpyCH4III ACNGT 5 cut(s) 7, 764, 1199, 1619, 1904
HpyCH4IV ACGT 3 cut(s) 376, 731, 1305
HpyF10VI GCNNNNNNNGC 1 cut(s) 1412
HpyF3I CTNAG 5 cut(s) 522, 684, 847, 1236, 1358
HpySE526I ACGT 3 cut(s) 376, 731, 1305
Hsp92I GRCGYC 1 cut(s) 731
HspAI GCGC 2 cut(s) 85, 1362
Kpn2I TCCGGA 2 cut(s) 613, 1429
Kzo9I GATC 5 cut(s) 436, 941, 1047, 1134, 1264
LmnI GCTCC 4 cut(s) 167, 348, 475, 1432
Lsp1109I GCAGC 2 cut(s) 378, 1390
LweI GCATC 3 cut(s) 811, 1244, 1324
MaeI CTAG 4 cut(s) 179, 1073, 1178, 1656
MaeII ACGT 3 cut(s) 376, 731, 1305
MaeIII GTNAC 6 cut(s) 7, 34, 372, 721, 1163, 1445
MalI GATC 5 cut(s) 438, 943, 1049, 1136, 1266
MboI GATC 5 cut(s) 436, 941, 1047, 1134, 1264
MboII GAAGA 5 cut(s) 280, 300, 673, 1765, 1825
MfeI CAATTG 1 cut(s) 1389
MhlI GDGCHC 2 cut(s) 178, 1287
MlsI TGGCCA 1 cut(s) 408
MluNI TGGCCA 1 cut(s) 408
MlyI GAGTC 3 cut(s) 811, 1430, 1724
MmeI TCCRAC 1 cut(s) 296
Mox20I TGGCCA 1 cut(s) 408
Mph1103I ATGCAT 4 cut(s) 457, 708, 1068, 1259
MroI TCCGGA 2 cut(s) 613, 1429
MscI TGGCCA 1 cut(s) 408
MseI TTAA 4 cut(s) 26, 603, 1611, 1820
MslI CAYNNNNRTG 3 cut(s) 171, 1109, 1380
Msp20I TGGCCA 1 cut(s) 408
MspCI CTTAAG 1 cut(s) 1819
MspI CCGG 3 cut(s) 212, 614, 1430
MspR9I CCNGG 2 cut(s) 212, 1545
MunI CAATTG 1 cut(s) 1389
Mva1269I GAATGC 3 cut(s) 457, 810, 991
MvaI CCWGG 1 cut(s) 1545
MwoI GCNNNNNNNGC 1 cut(s) 1412
NciI CCSGG 1 cut(s) 212
NcoI CCATGG 2 cut(s) 169, 1168
NdeII GATC 5 cut(s) 436, 941, 1047, 1134, 1264
NlaIV GGNNCC 4 cut(s) 175, 216, 1428, 1927
NmuCI GTSAC 3 cut(s) 7, 34, 372
NsiI ATGCAT 4 cut(s) 457, 708, 1068, 1259
NspI RCATGY 3 cut(s) 304, 896, 1368
NspV TTCGAA 1 cut(s) 1534
OliI CACNNNNGTG 1 cut(s) 171
PaeI GCATGC 2 cut(s) 896, 1368
PagI TCATGA 2 cut(s) 1078, 1579
PctI GAATGC 3 cut(s) 457, 810, 991
PfeI GAWTC 6 cut(s) 207, 610, 1240, 1372, 1462, 1540
PfoI TCCNGGA 1 cut(s) 210
PkrI GCNGC 2 cut(s) 368, 1405
PleI GAGTC 3 cut(s) 810, 1430, 1724
PpsI GAGTC 3 cut(s) 810, 1430, 1724
PsiI TTATAA 1 cut(s) 1872
Psp6I CCWGG 1 cut(s) 1543
PspFI CCCAGC 1 cut(s) 478
PspGI CCWGG 1 cut(s) 1543
PspN4I GGNNCC 4 cut(s) 175, 216, 1428, 1927
PspPI GGNCC 2 cut(s) 214, 1759
PstNI CAGNNNCTG 1 cut(s) 281
RsaI GTAC 6 cut(s) 285, 470, 907, 1223, 1560, 1633
RsaNI GTAC 6 cut(s) 284, 469, 906, 1222, 1559, 1632
RseI CAYNNNNRTG 3 cut(s) 171, 1109, 1380
SaqAI TTAA 4 cut(s) 26, 603, 1611, 1820
SatI GCNGC 2 cut(s) 367, 1404
Sau3AI GATC 5 cut(s) 436, 941, 1047, 1134, 1264
Sau96I GGNCC 2 cut(s) 214, 1759
ScaI AGTACT 1 cut(s) 1560
SchI GAGTC 3 cut(s) 811, 1430, 1724
ScrFI CCNGG 2 cut(s) 212, 1545
SduI GDGCHC 2 cut(s) 178, 1287
SfaNI GCATC 3 cut(s) 811, 1244, 1324
SfcI CTRYAG 1 cut(s) 1338
SfuI TTCGAA 1 cut(s) 1534
SinI GGWCC 1 cut(s) 214
SmiMI CAYNNNNRTG 3 cut(s) 171, 1109, 1380
SmlI CTYRAG 4 cut(s) 1409, 1438, 1692, 1819
SmoI CTYRAG 4 cut(s) 1409, 1438, 1692, 1819
SphI GCATGC 2 cut(s) 896, 1368
SsiI CCGC 2 cut(s) 12, 1331
SspMI CTAG 4 cut(s) 179, 1073, 1178, 1656
StyD4I CCNGG 2 cut(s) 210, 1543
StyI CCWWGG 3 cut(s) 169, 1072, 1168
TaaI ACNGT 5 cut(s) 7, 764, 1199, 1619, 1904
TaiI ACGT 3 cut(s) 379, 734, 1308
TaqI TCGA 5 cut(s) 205, 333, 1460, 1534, 1879
TatI WGTACW 3 cut(s) 283, 468, 1558
TfiI GAWTC 6 cut(s) 207, 610, 1240, 1372, 1462, 1540
Tru1I TTAA 4 cut(s) 26, 603, 1611, 1820
Tru9I TTAA 4 cut(s) 26, 603, 1611, 1820
TscAI CASTG 2 cut(s) 555, 1624
TseFI GTSAC 3 cut(s) 7, 34, 372
TseI GCWGC 2 cut(s) 366, 1403
Tsp45I GTSAC 3 cut(s) 7, 34, 372
TspGWI ACGGA 2 cut(s) 429, 1239
TspRI CASTG 2 cut(s) 555, 1624
Vha464I CTTAAG 1 cut(s) 1819
VpaK11BI GGWCC 1 cut(s) 214
XapI RAATTY 4 cut(s) 319, 544, 925, 1583
XceI RCATGY 3 cut(s) 304, 896, 1368
XcmI CCANNNNNNNNNTGG 1 cut(s) 859
XmaJI CCTAGG 1 cut(s) 1072
XspI CTAG 4 cut(s) 179, 1073, 1178, 1656
ZraI GACGTC 1 cut(s) 732
ZrmI AGTACT 1 cut(s) 1560
Zsp2I ATGCAT 4 cut(s) 457, 708, 1068, 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.