Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0019054.1

Orthogroup ID

OG0015055

Physical Location & Seq

Genomic Coordinates Reverse (-)

11499 .. 18134

Gene Structure 6636 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0019054.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

atggaggacagaggaactagatttgtgttctctttcctccaacacccacttctggtcaccactgtgactcacctccaccatcacggacctcaccaacctccgacgattggtttcaattctgacgaaaccgaagatcttcggtcggaaagcagaggcccacgacccgctgcccacaccctacgctcctcacacccagccgccgaatctggcccttccaagaaacgcccgccacagctttatcagtctggcggcctccccaggcaagagaccatggtaaccatcacgccgcccaccaaagctacgagcgactgcacttgttgcactagactggtgctgcaagaacgaacccgaggcctcaatcggcgatccgaccgtcgatctctagcaggaattcgccgacctcgctcctcctctagttccgaaatcgtgacgtcaatctcctcctcgtcaaacccgattccaccaaatcaaacgcctatctctgttgcaaaaccactaagggtctgtacttcgcctcgttcctctgaccaaaccagcctccaaacgcaagaaggagatgaagcccttatcctcttaccgcttgcaatgccggagcaccctattgcagatcgaagccaagaagcgccgccgcactgctggcgaaacttaggtttaggtttcgaagaagaggaacaagaagagggaattactgaagaggaaaatggaaaggcagagaaaagacttaacaaacccattaaagttagagagatgaagagtagtagtcaaaggcgttcgatcaataggcaggtttctctagagactggtttttcggtgcttcaaaaagagtccaagagggctaaagatgagaacattggtgttaatcttcccagaagtggaagaagtttaggaggttttgattccattaacaggtttggcatggaaggaaggaaaggagacttcagcatcttcaagaccaaatcatcaaaccccagtaggcaaaactctttgttgccatcaaaaaaggaaagatcagagatggagtctcagaagactgatggagcaggacttgatgagtctgttgatacaagtgttcctgctggtagatactttgcagcacttagagggcctgaacttgaccaagtcaaggatgatgaagatattctcctcccaaaagatgagcaatggccctttctcctcagatttccaattggatgctttggtatttgccttggccttagcagccaagcagtcttatggcatgctcttgcgacaagcccagccactgagtttcttcacatcccactcttcataaaccttgccctctggcttttagcattagcagtcctattttgtgtctccttcacctatattctcaaaattctcttctactttgaagcagtcaaaagagagtacttccaccctgtgagagtcaacttcttctttgctccttgggttgtatgcatgttcttagcccttggtgcaccaccaactttgttccctaataaactccaacctgcaatttggtgcaccttcatgttaccctactttcttctggaactcaagatctatggacagtggctttcgggtgggaagaggcgtctttgtaaggtggccaatccatcttctcatctctcagtggttggaaactttgttggggcaattttggctgccaaggttgggtggaaggagcctgccaagttcttgtgggcagtaggctttgcacattactttgtggtctttgttactttgtatcagagattgccaacaagtgaagcgttgccgagggagctccatccggtgtattccatgtttattgctgccccgtcagccgcaagtatggcttggcaggacatttatggtgatttcaatgaggtgtcgaggacctgctacttcatcgcactgtttctctatatttcactggttgtgaggatcaaattcttcacagggtttagattttcggtggcttggtgggcatacacctttccaatgacaacattctcagttgccaccattaagtatgcagaagaagtaccgtcagttctaaccaagagcctcgcagttactctttctttcatgtcatcaacaacggtgtctgtactgtttgtgtccactcttcttcatgcctttgtttggcacacattgtttcctaatgatcttgccatagccataacaaaccgaagacttggcaagttcaaaaaggcctatgatataaagcgctggacaaagcaggctctaaccaagaacaacatagcagcaaaggttggagggaaagaagagagcttatatccatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005253 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006873 GO:0006950 GO:0006979 GO:0008150 GO:0008308 GO:0008509 GO:0009270 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0010037 GO:0010118 GO:0010119 GO:0010193 GO:0015075 GO:0015103 GO:0015267 GO:0015318 GO:0015698 GO:0015711 GO:0016020 GO:0016021 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019902 GO:0019903 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0030104 GO:0031224 GO:0032501 GO:0033993 GO:0034220 GO:0042221 GO:0042493 GO:0042592 GO:0044425 GO:0044464 GO:0046677 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050878 GO:0050891 GO:0050896 GO:0051179 GO:0051234 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071702 GO:0071944 GO:0072347 GO:0090332 GO:0097305 GO:0098656 GO:1901700 GO:1902456

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SLAC1

Protein Analysis

756

Amino Acids

84.87

Weight (kDa)

9.36

Isoelectric Point (pI)

60.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12480
fragaria_vesca	FvH4_5g01000
malus_domestica	MD04G1076000.v1.1
prunus_persica	Prupe.5G083800_v2.0.a1
pyrus_communis	pycom04g06690
rosa_chinensis	RchiOBHm_Chr7g0200381
rosa_laevigata	RLG00000003731
rosa_multiflora	Rmu_sc0005211.1_g000002 Rmu_sc0019054.1_g000003
rosa_roxburghii	Rroxscaffold_3G00256050
rosa_rugosa	Rorug07G0059900
rosa_samantha	Rh7AG185100 Rh7BG188200 Rh7CG195400 Rh7DG189200
rosa_wichuraiana	Rw7G016220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	434
Acc36I	ACCTGC	3 cut(s)	775, 1501, 1871
AciI	CCGC	9 cut(s)	165, 198, 227, 249, 287, 578, 626, 629, 1809
AclWI	GGATC	2 cut(s)	360, 1916
AcoI	YGGCCR	1 cut(s)	1590
AcsI	RAATTY	3 cut(s)	390, 1356, 1913
AcuI	CTGAAG	2 cut(s)	711, 922
AcyI	GRCGYC	2 cut(s)	431, 1576
AdeI	CACNNNGTG	1 cut(s)	1402
AfaI	GTAC	4 cut(s)	508, 1391, 2010, 2076
AfeI	AGCGCT	1 cut(s)	2195
AfiI	CCNNNNNNNGG	7 cut(s)	52, 107, 872, 906, 1123, 1656, 2109
AgsI	TTSAA	6 cut(s)	115, 818, 949, 1373, 1846, 2173
AjnI	CCWGG	1 cut(s)	257
AjuI	GAANNNNNNNTTGG	2 cut(s)	33, 65
AleI	CACNNNNGTG	1 cut(s)	62
AluBI	AGCT	4 cut(s)	235, 299, 1768, 2259
AluI	AGCT	4 cut(s)	235, 299, 1768, 2259
Alw21I	GWGCWC	4 cut(s)	597, 1462, 1508, 1770
Alw26I	GTCTC	5 cut(s)	260, 791, 927, 1026, 1339
Alw44I	GTGCAC	2 cut(s)	1458, 1504
AlwI	GGATC	2 cut(s)	360, 1916
AlwNI	CAGNNNCTG	1 cut(s)	1262
Ama87I	CYCGRG	1 cut(s)	348
Aor51HI	AGCGCT	1 cut(s)	2195
AoxI	GGCC	9 cut(s)	154, 208, 250, 352, 1103, 1163, 1210, 1590, 2178
ApaLI	GTGCAC	2 cut(s)	1458, 1504
ApeKI	GCWGC	7 cut(s)	167, 334, 1091, 1218, 1646, 1796, 2231
ApoI	RAATTY	3 cut(s)	390, 1356, 1913
ArsI	GACNNNNNNTTYG	2 cut(s)	790, 822
Asp700I	GAANNNNTTC	2 cut(s)	135, 1137
AspLEI	GCGC	2 cut(s)	625, 2196
AspS9I	GGNCC	6 cut(s)	86, 155, 209, 1103, 1164, 1860
AsuHPI	GGTGA	5 cut(s)	49, 62, 83, 1333, 1850
AsuII	TTCGAA	1 cut(s)	660
AvaI	CYCGRG	1 cut(s)	348
AvaII	GGWCC	2 cut(s)	86, 1860
BaeGI	GKGCMC	2 cut(s)	1462, 1508
BaeI	ACNNNNGTAYC	2 cut(s)	1053, 1086
BalI	TGGCCA	1 cut(s)	1592
BanII	GRGCYC	1 cut(s)	1770
BbsI	GAAGAC	2 cut(s)	1034, 2164
Bbv12I	GWGCWC	4 cut(s)	597, 1462, 1508, 1770
BbvI	GCAGC	7 cut(s)	154, 321, 1103, 1230, 1633, 1783, 2243
BccI	CCATC	7 cut(s)	87, 287, 1000, 1009, 1028, 1606, 1779
BciT130I	CCWGG	1 cut(s)	259
BcoDI	GTCTC	5 cut(s)	260, 791, 927, 1026, 1339
BfaI	CTAG	5 cut(s)	18, 324, 383, 414, 794
BfoI	RGCGCY	2 cut(s)	626, 2197
BfuAI	ACCTGC	3 cut(s)	775, 1501, 1871
BglII	AGATCT	2 cut(s)	133, 1542
BmcAI	AGTACT	1 cut(s)	1391
Bme1390I	CCNGG	1 cut(s)	259
Bme18I	GGWCC	2 cut(s)	86, 1860
BmeT110I	CYCGRG	1 cut(s)	348
BmgT120I	GGNCC	6 cut(s)	86, 155, 209, 1103, 1164, 1860
BmiI	GGNNCC	1 cut(s)	1668
BmrFI	CCNGG	1 cut(s)	259
BmrI	ACTGGG	1 cut(s)	963
BmsI	GCATC	2 cut(s)	951, 1181
BmuI	ACTGGG	1 cut(s)	963
BpiI	GAAGAC	2 cut(s)	1034, 2164
Bpu10I	CCTNAGC	1 cut(s)	1214
Bpu14I	TTCGAA	1 cut(s)	660
BpuEI	CTTGAG	1 cut(s)	1523
BsaHI	GRCGYC	2 cut(s)	431, 1576
BsaI	GGTCTC	1 cut(s)	260
BsaJI	CCNNGG	8 cut(s)	257, 270, 349, 1207, 1427, 1453, 1650, 1760
BsaWI	WCCGGW	1 cut(s)	1774
Bsc4I	CCNNNNNNNGG	7 cut(s)	52, 107, 872, 906, 1123, 1656, 2109
Bse1I	ACTGG	4 cut(s)	333, 805, 969, 1902
Bse3DI	GCAATG	2 cut(s)	591, 1166
BseBI	CCWGG	1 cut(s)	259
BseDI	CCNNGG	8 cut(s)	257, 270, 349, 1207, 1427, 1453, 1650, 1760
BseGI	GGATG	4 cut(s)	1132, 1196, 1275, 1771
BseLI	CCNNNNNNNGG	7 cut(s)	52, 107, 872, 906, 1123, 1656, 2109
BseMI	GCAATG	2 cut(s)	591, 1166
BseMII	CTCAG	5 cut(s)	1037, 1189, 1254, 1626, 1992
BseNI	ACTGG	4 cut(s)	333, 805, 969, 1902
BseRI	GAGGAG	7 cut(s)	175, 397, 400, 430, 433, 1133, 1163
BseSI	GKGCMC	2 cut(s)	1462, 1508
BseXI	GCAGC	7 cut(s)	154, 321, 1103, 1230, 1633, 1783, 2243
BseYI	CCCAGC	2 cut(s)	193, 1255
BsgI	GTGCAG	1 cut(s)	295
Bsh1285I	CGRYCG	2 cut(s)	143, 373
BshFI	GGCC	9 cut(s)	156, 210, 252, 354, 1105, 1165, 1212, 1592, 2180
BsiEI	CGRYCG	2 cut(s)	143, 373
BsiHKAI	GWGCWC	4 cut(s)	597, 1462, 1508, 1770
BsiHKCI	CYCGRG	1 cut(s)	348
BsiSI	CCGG	2 cut(s)	590, 1775
BslI	CCNNNNNNNGG	7 cut(s)	52, 107, 872, 906, 1123, 1656, 2109
BsmAI	GTCTC	5 cut(s)	260, 791, 927, 1026, 1339
BsnI	GGCC	9 cut(s)	156, 210, 252, 354, 1105, 1165, 1212, 1592, 2180
Bso31I	GGTCTC	1 cut(s)	260
BsoBI	CYCGRG	1 cut(s)	348
Bsp119I	TTCGAA	1 cut(s)	660
Bsp1286I	GDGCHC	4 cut(s)	597, 1462, 1508, 1770
Bsp143I	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
Bsp19I	CCATGG	1 cut(s)	270
BspACI	CCGC	9 cut(s)	165, 198, 227, 249, 287, 578, 626, 629, 1809
BspANI	GGCC	9 cut(s)	156, 210, 252, 354, 1105, 1165, 1212, 1592, 2180
BspCNI	CTCAG	5 cut(s)	1036, 1188, 1255, 1625, 1991
BspLI	GGNNCC	1 cut(s)	1668
BspMI	ACCTGC	3 cut(s)	775, 1501, 1871
BspPI	GGATC	2 cut(s)	360, 1916
BspT104I	TTCGAA	1 cut(s)	660
BspTNI	GGTCTC	1 cut(s)	260
BsrDI	GCAATG	2 cut(s)	591, 1166
BsrI	ACTGG	4 cut(s)	333, 805, 969, 1902
BssECI	CCNNGG	8 cut(s)	257, 270, 349, 1207, 1427, 1453, 1650, 1760
BssMI	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
BssNI	GRCGYC	2 cut(s)	431, 1576
BssT1I	CCWWGG	5 cut(s)	270, 1207, 1427, 1453, 1650
Bst2UI	CCWGG	1 cut(s)	259
Bst4CI	ACNGT	7 cut(s)	64, 374, 1554, 1881, 2013, 2068, 2079
Bst6I	CTCTTC	9 cut(s)	660, 672, 687, 746, 1289, 1367, 1565, 2097, 2247
BstACI	GRCGYC	2 cut(s)	431, 1576
BstAPI	GCANNNNNTGC	1 cut(s)	318
BstBI	TTCGAA	1 cut(s)	660
BstC8I	GCNNGC	6 cut(s)	227, 582, 638, 1239, 1671, 2208
BstDSI	CCRYGG	1 cut(s)	270
BstEII	GGTNACC	2 cut(s)	55, 274
BstF5I	GGATG	4 cut(s)	1132, 1196, 1275, 1771
BstH2I	RGCGCY	2 cut(s)	626, 2197
BstHHI	GCGC	2 cut(s)	625, 2196
BstKTI	GATC	9 cut(s)	136, 368, 380, 610, 777, 1010, 1545, 1911, 2134
BstMAI	GTCTC	5 cut(s)	260, 791, 927, 1026, 1339
BstMBI	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
BstMCI	CGRYCG	2 cut(s)	143, 373
BstNI	CCWGG	1 cut(s)	259
BstNSI	RCATGY	2 cut(s)	1241, 1444
BstPI	GGTNACC	2 cut(s)	55, 274
BstSCI	CCNGG	1 cut(s)	257
BstSLI	GKGCMC	2 cut(s)	1462, 1508
BstV1I	GCAGC	7 cut(s)	154, 321, 1103, 1230, 1633, 1783, 2243
BstV2I	GAAGAC	2 cut(s)	1034, 2164
BstX2I	RGATCY	2 cut(s)	133, 1542
BstYI	RGATCY	2 cut(s)	133, 1542
BsuRI	GGCC	9 cut(s)	156, 210, 252, 354, 1105, 1165, 1212, 1592, 2180
BtgI	CCRYGG	1 cut(s)	270
BtgZI	GCGATG	1 cut(s)	1858
BtsCI	GGATG	4 cut(s)	1132, 1196, 1275, 1771
BtsI	GCAGTG	1 cut(s)	631
BtsIMutI	CAGTG	7 cut(s)	60, 631, 1260, 1559, 1620, 1877, 1895
BveI	ACCTGC	3 cut(s)	775, 1501, 1871
Cac8I	GCNNGC	6 cut(s)	227, 582, 638, 1239, 1671, 2208
CaiI	CAGNNNCTG	1 cut(s)	1262
CfoI	GCGC	2 cut(s)	625, 2196
Cfr13I	GGNCC	6 cut(s)	86, 155, 209, 1103, 1164, 1860
CseI	GACGC	1 cut(s)	1565
Csp6I	GTAC	4 cut(s)	507, 1390, 2009, 2075
CspCI	CAANNNNNGTGG	2 cut(s)	1452, 1487
CviAII	CATG	8 cut(s)	271, 916, 1238, 1441, 1513, 1786, 2053, 2099
CviQI	GTAC	4 cut(s)	507, 1390, 2009, 2075
DpnI	GATC	9 cut(s)	135, 367, 379, 609, 776, 1009, 1544, 1910, 2133
DpnII	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
DraIII	CACNNNGTG	1 cut(s)	1402
EaeI	YGGCCR	1 cut(s)	1590
Eam1104I	CTCTTC	9 cut(s)	660, 672, 687, 746, 1289, 1367, 1565, 2097, 2247
EarI	CTCTTC	9 cut(s)	660, 672, 687, 746, 1289, 1367, 1565, 2097, 2247
Ecl136II	GAGCTC	1 cut(s)	1768
Eco130I	CCWWGG	5 cut(s)	270, 1207, 1427, 1453, 1650
Eco147I	AGGCCT	2 cut(s)	354, 2180
Eco24I	GRGCYC	1 cut(s)	1770
Eco31I	GGTCTC	1 cut(s)	260
Eco47I	GGWCC	2 cut(s)	86, 1860
Eco47III	AGCGCT	1 cut(s)	2195
Eco53kI	GAGCTC	1 cut(s)	1768
Eco57I	CTGAAG	2 cut(s)	711, 922
Eco88I	CYCGRG	1 cut(s)	348
Eco91I	GGTNACC	2 cut(s)	55, 274
EcoICRI	GAGCTC	1 cut(s)	1768
EcoO109I	RGGNCCY	2 cut(s)	1103, 1860
EcoO65I	GGTNACC	2 cut(s)	55, 274
EcoRI	GAATTC	1 cut(s)	390
EcoRII	CCWGG	1 cut(s)	257
EcoT14I	CCWWGG	5 cut(s)	270, 1207, 1427, 1453, 1650
EcoT22I	ATGCAT	1 cut(s)	1442
EcoT38I	GRGCYC	1 cut(s)	1770
ErhI	CCWWGG	5 cut(s)	270, 1207, 1427, 1453, 1650
FaeI	CATG	8 cut(s)	274, 919, 1241, 1444, 1516, 1789, 2056, 2102
FalI	AAGNNNNNCTT	2 cut(s)	1804, 1836
FatI	CATG	8 cut(s)	270, 915, 1237, 1440, 1512, 1785, 2052, 2098
FauI	CCCGC	2 cut(s)	172, 234
FokI	GGATG	4 cut(s)	1139, 1203, 1262, 1758
FriOI	GRGCYC	1 cut(s)	1770
FspBI	CTAG	5 cut(s)	18, 324, 383, 414, 794
GlaI	GCGC	2 cut(s)	624, 2195
GsaI	CCCAGC	2 cut(s)	197, 1259
HaeII	RGCGCY	2 cut(s)	626, 2197
HaeIII	GGCC	9 cut(s)	156, 210, 252, 354, 1105, 1165, 1212, 1592, 2180
HapII	CCGG	2 cut(s)	590, 1775
HgaI	GACGC	1 cut(s)	1565
HhaI	GCGC	2 cut(s)	625, 2196
Hin1I	GRCGYC	2 cut(s)	431, 1576
Hin1II	CATG	8 cut(s)	274, 919, 1241, 1444, 1516, 1789, 2056, 2102
Hin6I	GCGC	2 cut(s)	623, 2194
HinP1I	GCGC	2 cut(s)	623, 2194
HincII	GTYRAC	1 cut(s)	1411
HindII	GTYRAC	1 cut(s)	1411
HinfI	GANTC	8 cut(s)	67, 203, 457, 824, 896, 1019, 1052, 1407
HpaII	CCGG	2 cut(s)	590, 1775
HphI	GGTGA	5 cut(s)	49, 62, 83, 1333, 1850
Hpy166II	GTNNAC	4 cut(s)	1411, 1460, 1506, 2088
Hpy188III	TCNNGA	5 cut(s)	427, 794, 949, 1532, 1540
Hpy8I	GTNNAC	4 cut(s)	1411, 1460, 1506, 2088
Hpy99I	CGWCG	2 cut(s)	106, 378
HpyAV	CCTTC	7 cut(s)	222, 545, 914, 918, 1348, 1519, 1657
HpyCH4III	ACNGT	7 cut(s)	64, 374, 1554, 1881, 2013, 2068, 2079
HpyCH4IV	ACGT	1 cut(s)	431
HpySE526I	ACGT	1 cut(s)	431
Hsp92I	GRCGYC	2 cut(s)	431, 1576
Hsp92II	CATG	8 cut(s)	274, 919, 1241, 1444, 1516, 1789, 2056, 2102
HspAI	GCGC	2 cut(s)	623, 2194
Kzo9I	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
LmnI	GCTCC	8 cut(s)	188, 410, 592, 1037, 1429, 1666, 1765, 1773
Lsp1109I	GCAGC	7 cut(s)	154, 321, 1103, 1230, 1633, 1783, 2243
LweI	GCATC	2 cut(s)	951, 1181
MaeI	CTAG	5 cut(s)	18, 324, 383, 414, 794
MaeII	ACGT	1 cut(s)	431
MaeIII	GTNAC	7 cut(s)	55, 64, 274, 427, 1515, 1720, 2038
MalI	GATC	9 cut(s)	135, 367, 379, 609, 776, 1009, 1544, 1910, 2133
MboI	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
MfeI	CAATTG	1 cut(s)	1185
MflI	RGATCY	2 cut(s)	133, 1542
MhlI	GDGCHC	4 cut(s)	597, 1462, 1508, 1770
MlsI	TGGCCA	1 cut(s)	1592
MluCI	AATT	8 cut(s)	115, 390, 684, 1185, 1356, 1497, 1638, 1913
MluNI	TGGCCA	1 cut(s)	1592
MlyI	GAGTC	5 cut(s)	61, 833, 1028, 1061, 1416
MmeI	TCCRAC	7 cut(s)	64, 123, 125, 393, 1513, 1600, 2221
Mox20I	TGGCCA	1 cut(s)	1592
Mph1103I	ATGCAT	1 cut(s)	1442
MroXI	GAANNNNTTC	2 cut(s)	135, 1137
MscI	TGGCCA	1 cut(s)	1592
MseI	TTAA	5 cut(s)	723, 735, 858, 903, 1992
MslI	CAYNNNNRTG	2 cut(s)	62, 1511
Msp20I	TGGCCA	1 cut(s)	1592
MspA1I	CMGCKG	1 cut(s)	167
MspI	CCGG	2 cut(s)	590, 1775
MspR9I	CCNGG	1 cut(s)	259
MunI	CAATTG	1 cut(s)	1185
MvaI	CCWGG	1 cut(s)	259
NcoI	CCATGG	1 cut(s)	270
NdeII	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
NlaIII	CATG	8 cut(s)	274, 919, 1241, 1444, 1516, 1789, 2056, 2102
NlaIV	GGNNCC	1 cut(s)	1668
NmeAIII	GCCGAG	1 cut(s)	1785
NmuCI	GTSAC	3 cut(s)	55, 64, 427
NsiI	ATGCAT	1 cut(s)	1442
NspI	RCATGY	2 cut(s)	1241, 1444
NspV	TTCGAA	1 cut(s)	660
OliI	CACNNNNGTG	1 cut(s)	62
PaeI	GCATGC	1 cut(s)	1241
PceI	AGGCCT	2 cut(s)	354, 2180
PcsI	WCGNNNNNNNCGW	1 cut(s)	452
PdmI	GAANNNNTTC	2 cut(s)	135, 1137
PfeI	GAWTC	3 cut(s)	203, 457, 896
PflFI	GACNNNGTC	1 cut(s)	1118
PleI	GAGTC	5 cut(s)	61, 832, 1027, 1060, 1415
PpsI	GAGTC	5 cut(s)	61, 832, 1027, 1060, 1415
PpuMI	RGGWCCY	1 cut(s)	1860
Psp124BI	GAGCTC	1 cut(s)	1770
Psp5II	RGGWCCY	1 cut(s)	1860
Psp6I	CCWGG	1 cut(s)	257
PspEI	GGTNACC	2 cut(s)	55, 274
PspFI	CCCAGC	2 cut(s)	193, 1255
PspGI	CCWGG	1 cut(s)	257
PspN4I	GGNNCC	1 cut(s)	1668
PspPI	GGNCC	6 cut(s)	86, 155, 209, 1103, 1164, 1860
PspPPI	RGGWCCY	1 cut(s)	1860
PsrI	GAACNNNNNNTAC	2 cut(s)	2001, 2033
PstNI	CAGNNNCTG	1 cut(s)	1262
PsuI	RGATCY	2 cut(s)	133, 1542
PsyI	GACNNNGTC	1 cut(s)	1118
RsaI	GTAC	4 cut(s)	508, 1391, 2010, 2076
RsaNI	GTAC	4 cut(s)	507, 1390, 2009, 2075
RseI	CAYNNNNRTG	2 cut(s)	62, 1511
SacI	GAGCTC	1 cut(s)	1770
SaqAI	TTAA	5 cut(s)	723, 735, 858, 903, 1992
Sau3AI	GATC	9 cut(s)	133, 365, 377, 607, 774, 1007, 1542, 1908, 2131
Sau96I	GGNCC	6 cut(s)	86, 155, 209, 1103, 1164, 1860
ScaI	AGTACT	1 cut(s)	1391
SchI	GAGTC	5 cut(s)	61, 833, 1028, 1061, 1416
ScrFI	CCNGG	1 cut(s)	259
SduI	GDGCHC	4 cut(s)	597, 1462, 1508, 1770
SfaNI	GCATC	2 cut(s)	951, 1181
SfuI	TTCGAA	1 cut(s)	660
SinI	GGWCC	2 cut(s)	86, 1860
SmiMI	CAYNNNNRTG	2 cut(s)	62, 1511
SmlI	CTYRAG	1 cut(s)	1538
SmoI	CTYRAG	1 cut(s)	1538
SphI	GCATGC	1 cut(s)	1241
Sse9I	AATT	8 cut(s)	115, 390, 684, 1185, 1356, 1497, 1638, 1913
SseBI	AGGCCT	2 cut(s)	354, 2180
SsiI	CCGC	9 cut(s)	165, 198, 227, 249, 287, 578, 626, 629, 1809
SspMI	CTAG	5 cut(s)	18, 324, 383, 414, 794
SstI	GAGCTC	1 cut(s)	1770
StuI	AGGCCT	2 cut(s)	354, 2180
StyD4I	CCNGG	1 cut(s)	257
StyI	CCWWGG	5 cut(s)	270, 1207, 1427, 1453, 1650
TaaI	ACNGT	7 cut(s)	64, 374, 1554, 1881, 2013, 2068, 2079
TaiI	ACGT	1 cut(s)	434
TaqI	TCGA	5 cut(s)	376, 610, 660, 773, 1856
TaqII	GACCGA	1 cut(s)	129
TasI	AATT	8 cut(s)	115, 390, 684, 1185, 1356, 1497, 1638, 1913
TatI	WGTACW	3 cut(s)	506, 1389, 2074
TauI	GCSGC	6 cut(s)	200, 252, 289, 628, 631, 1811
TfiI	GAWTC	3 cut(s)	203, 457, 896
Tru1I	TTAA	5 cut(s)	723, 735, 858, 903, 1992
Tru9I	TTAA	5 cut(s)	723, 735, 858, 903, 1992
TscAI	CASTG	7 cut(s)	67, 638, 1267, 1559, 1620, 1884, 1902
TseFI	GTSAC	3 cut(s)	55, 64, 427
TseI	GCWGC	7 cut(s)	167, 334, 1091, 1218, 1646, 1796, 2231
Tsp45I	GTSAC	3 cut(s)	55, 64, 427
TspDTI	ATGAA	8 cut(s)	573, 764, 1146, 1276, 1501, 1861, 2041, 2087
TspGWI	ACGGA	1 cut(s)	99
TspRI	CASTG	7 cut(s)	67, 638, 1267, 1559, 1620, 1884, 1902
Tth111I	GACNNNGTC	1 cut(s)	1118
VneI	GTGCAC	2 cut(s)	1458, 1504
VpaK11BI	GGWCC	2 cut(s)	86, 1860
XapI	RAATTY	3 cut(s)	390, 1356, 1913
XbaI	TCTAGA	1 cut(s)	793
XceI	RCATGY	2 cut(s)	1241, 1444
XmnI	GAANNNNTTC	2 cut(s)	135, 1137
XspI	CTAG	5 cut(s)	18, 324, 383, 414, 794
ZraI	GACGTC	1 cut(s)	432
ZrmI	AGTACT	1 cut(s)	1391
Zsp2I	ATGCAT	1 cut(s)	1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.