Rmu_sc0031732.1_g000001

Ferric reduction oxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0031732.1
OG0017311
Physical Location & Seq
Forward (+)
1 .. 4796
4796 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0031732.1_g000001.1.cds

Sequence Viewer

Length: 1569 bp
gtagtagagtggaaaagtgatggtggtgcaaacttggcgggaattatttgctatggaatctttctgttgatttgggtgacaacacttcctcctgtgagaaagcgatattttgagcttttttactatacccatcaactctatgttttgtttgtcatcttcttggccttgcatattggtggcgtcaatttcagccaagctgctggaggaatatttctttttatgctggatcgctttctaaggttctgccaatcacgaaagacggtcaacatagtttcagcaacatgctttccatgtggaactgtcaagttggtgcttccaaaacctgcaaacttgcactacaatgcgcttggtttcatctttcttcaagtgaagagtatatcttcactgcaatggcatcctttcagcgtctcatccagtcctctgaatggtaaatatcatctggaagtcctcataaagaccgttggggaatggaccacaaagctaagggaaacagtctccaagacttctgcagaggactcagatatacaacttccacacactcctgctcatcagattatggcttctgttgaggggccttatggccatgaatcaccgtactacttgaggtatgaaaaacttgtcttggtagcaggaggcagtgggatctcaccattcttagctatcttgagtgatattctccatcgaattaagatgaacaaaccttgtctaccgcaacatgtattgcttgtttgggctatcaaaacgtcaaatgagctctctcttctttccacagttgacatggggtctatggatttttctgatagattggatattgaaatccaggcctatgtcacacgtgaatcagaatgtccagtggaagatggtagattttacaacgctcctagttcttctgttttctccgtctccaagggagcaaccatgtcagttttgactggcacaggaaacaagatatgggccggaacttatgttattgcatctacaattgggtttgttattgttttgagcttgttagacgtattctacataaacccttacagcatagacgcttggtggtatttagggcttctttttgtgatatgtatggttgcaagtgttcttatatttggaggtctcacaattggattatggcatctttgggaaagaaaaacctcattccaagagagtttggaaaatgggaatactgaaatagtgcagagtaatggaagatcaacagacacaaatgaataccagaaaactctgatcagtgcagccacagttcggtatggccgcagaccagacttctcagaaattttcggatctttagcacaacattcggctcaagttaatgttggtgtcttcgtgtgtggtcccacaactctacagtccagtgttgctaaagaattttcctcgtgcaaccagcctgagaagaaccaccttggatccgacctccacagcccatctgccccaccatttcgtactgccagaactgagcctcacccaccccgccaccgcgaacactcctgcaacctgatactaacacccccgatccggagcaagaaaaccccgcttgagggacctttgattgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

522

Amino Acids

58.02

Weight (kDa)

8.25

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017311)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g27140
rosa_chinensis RchiOBHm_Chr7g0218141
rosa_laevigata RLG00000002396
rosa_multiflora Rmu_co8413095.1_g000001 Rmu_sc0003627.1_g000011 Rmu_sc0031732.1_g000001
rosa_roxburghii Rroxscaffold_3G00241270
rosa_rugosa Rorug07G0174500
rosa_samantha Rh7AG317000 Rh7BG308100 Rh7CG333800 Rh7DG315800
rosa_wichuraiana Rw7G026820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 331
AccI GTMKAC 1 cut(s) 706
AccII CGCG 1 cut(s) 1491
AccIII TCCGGA 1 cut(s) 1527
AciI CCGC 6 cut(s) 38, 710, 1267, 1483, 1489, 1544
AclWI GGATC 6 cut(s) 234, 650, 1303, 1413, 1426, 1519
AcoI YGGCCR 2 cut(s) 580, 1264
AcsI RAATTY 2 cut(s) 1287, 1379
AcvI CACGTG 1 cut(s) 836
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 2 cut(s) 596, 1456
AfiI CCNNNNNNNGG 5 cut(s) 425, 1257, 1527, 1549, 1550
AflIII ACRYGT 2 cut(s) 715, 833
AgsI TTSAA 2 cut(s) 365, 815
AhdI GACNNNNNGTC 1 cut(s) 781
AjnI CCWGG 1 cut(s) 819
AluBI AGCT 6 cut(s) 115, 197, 481, 659, 754, 1005
AluI AGCT 6 cut(s) 115, 197, 481, 659, 754, 1005
Alw21I GWGCWC 1 cut(s) 756
Alw26I GTCTC 4 cut(s) 412, 499, 907, 1115
AlwI GGATC 6 cut(s) 234, 650, 1303, 1413, 1426, 1519
Aor13HI TCCGGA 1 cut(s) 1527
AoxI GGCC 6 cut(s) 162, 572, 580, 822, 954, 1264
ApeKI GCWGC 2 cut(s) 197, 1247
ApoI RAATTY 2 cut(s) 1287, 1379
AspLEI GCGC 1 cut(s) 346
AspS9I GGNCC 5 cut(s) 471, 572, 954, 1346, 1553
AsuHPI GGTGA 4 cut(s) 88, 582, 639, 1466
AvaII GGWCC 3 cut(s) 471, 1346, 1553
BalI TGGCCA 1 cut(s) 582
BamHI GGATCC 1 cut(s) 1418
BanII GRGCYC 1 cut(s) 756
BauI CACGAG 1 cut(s) 1387
BbrPI CACGTG 1 cut(s) 836
BbsI GAAGAC 1 cut(s) 1327
Bbv12I GWGCWC 1 cut(s) 756
BbvI GCAGC 2 cut(s) 184, 1259
BccI CCATC 5 cut(s) 14, 138, 687, 854, 1444
BcgI CGANNNNNNTGC 2 cut(s) 1293, 1327
BciT130I CCWGG 1 cut(s) 821
BclI TGATCA 1 cut(s) 1239
BcoDI GTCTC 4 cut(s) 412, 499, 907, 1115
BfaI CTAG 1 cut(s) 882
BfmI CTRYAG 2 cut(s) 507, 1358
BfuAI ACCTGC 1 cut(s) 331
BisI GCNGC 3 cut(s) 198, 1248, 1267
BlsI GCNGC 3 cut(s) 199, 1249, 1268
Bme1390I CCNGG 1 cut(s) 821
Bme18I GGWCC 3 cut(s) 471, 1346, 1553
BmeRI GACNNNNNGTC 1 cut(s) 781
BmgT120I GGNCC 5 cut(s) 471, 572, 954, 1346, 1553
BmiI GGNNCC 4 cut(s) 573, 1348, 1420, 1554
BmrFI CCNGG 1 cut(s) 821
BmsI GCATC 3 cut(s) 403, 983, 1138
BpiI GAAGAC 1 cut(s) 1327
BpmI CTGGAG 1 cut(s) 222
Bpu10I CCTNAGC 1 cut(s) 482
BpuEI CTTGAG 4 cut(s) 622, 685, 1302, 1568
BsaAI YACGTR 1 cut(s) 836
BsaHI GRCGYC 1 cut(s) 180
BsaI GGTCTC 1 cut(s) 1115
BsaJI CCNNGG 2 cut(s) 906, 1414
BsaWI WCCGGW 1 cut(s) 1527
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 5 cut(s) 425, 1257, 1527, 1549, 1550
Bse1I ACTGG 4 cut(s) 414, 851, 937, 1365
Bse3DI GCAATG 1 cut(s) 395
BseAI TCCGGA 1 cut(s) 1527
BseBI CCWGG 1 cut(s) 821
BseDI CCNNGG 2 cut(s) 906, 1414
BseGI GGATG 2 cut(s) 394, 410
BseLI CCNNNNNNNGG 5 cut(s) 425, 1257, 1527, 1549, 1550
BseMI GCAATG 1 cut(s) 395
BseMII CTCAG 4 cut(s) 531, 1296, 1392, 1458
BseNI ACTGG 4 cut(s) 414, 851, 937, 1365
BseXI GCAGC 2 cut(s) 184, 1259
BsgI GTGCAG 2 cut(s) 1211, 1266
Bsh1236I CGCG 1 cut(s) 1491
BshFI GGCC 6 cut(s) 164, 574, 582, 824, 956, 1266
BsiHKAI GWGCWC 1 cut(s) 756
BsiSI CCGG 2 cut(s) 957, 1528
BslFI GGGAC 1 cut(s) 1332
BslI CCNNNNNNNGG 5 cut(s) 425, 1257, 1527, 1549, 1550
BsmAI GTCTC 4 cut(s) 412, 499, 907, 1115
BsmBI CGTCTC 2 cut(s) 412, 907
BsmFI GGGAC 1 cut(s) 1332
BsnI GGCC 6 cut(s) 164, 574, 582, 824, 956, 1266
Bso31I GGTCTC 1 cut(s) 1115
Bsp1286I GDGCHC 1 cut(s) 756
Bsp13I TCCGGA 1 cut(s) 1527
Bsp143I GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
BspACI CCGC 6 cut(s) 38, 710, 1267, 1483, 1489, 1544
BspANI GGCC 6 cut(s) 164, 574, 582, 824, 956, 1266
BspCNI CTCAG 4 cut(s) 530, 1295, 1393, 1459
BspEI TCCGGA 1 cut(s) 1527
BspFNI CGCG 1 cut(s) 1491
BspLI GGNNCC 4 cut(s) 573, 1348, 1420, 1554
BspMAI CTGCAG 1 cut(s) 511
BspMI ACCTGC 1 cut(s) 331
BspPI GGATC 6 cut(s) 234, 650, 1303, 1413, 1426, 1519
BspTNI GGTCTC 1 cut(s) 1115
BsrDI GCAATG 1 cut(s) 395
BsrI ACTGG 4 cut(s) 414, 851, 937, 1365
BssECI CCNNGG 2 cut(s) 906, 1414
BssMI GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
BssNI GRCGYC 1 cut(s) 180
BssSI CACGAG 1 cut(s) 1387
BssT1I CCWWGG 2 cut(s) 906, 1414
Bst2BI CACGAG 1 cut(s) 1387
Bst2UI CCWGG 1 cut(s) 821
Bst4CI ACNGT 8 cut(s) 262, 301, 460, 493, 594, 772, 1255, 1362
Bst6I CTCTTC 2 cut(s) 365, 765
BstACI GRCGYC 1 cut(s) 180
BstBAI YACGTR 1 cut(s) 836
BstDEI CTNAG 7 cut(s) 236, 482, 517, 655, 1282, 1401, 1467
BstF5I GGATG 2 cut(s) 394, 410
BstFNI CGCG 1 cut(s) 1491
BstHHI GCGC 1 cut(s) 346
BstKTI GATC 7 cut(s) 229, 645, 1208, 1242, 1298, 1421, 1527
BstMAI GTCTC 4 cut(s) 412, 499, 907, 1115
BstMBI GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
BstMWI GCNNNNNNNGC 1 cut(s) 35
BstNI CCWGG 1 cut(s) 821
BstNSI RCATGY 2 cut(s) 285, 719
BstSCI CCNGG 1 cut(s) 819
BstSFI CTRYAG 2 cut(s) 507, 1358
BstUI CGCG 1 cut(s) 1491
BstV1I GCAGC 2 cut(s) 184, 1259
BstV2I GAAGAC 1 cut(s) 1327
BstX2I RGATCY 3 cut(s) 642, 1295, 1418
BstXI CCANNNNNNTGG 1 cut(s) 200
BstYI RGATCY 3 cut(s) 642, 1295, 1418
BsuRI GGCC 6 cut(s) 164, 574, 582, 824, 956, 1266
BtsCI GGATG 2 cut(s) 394, 410
BtsI GCAGTG 2 cut(s) 383, 643
BtsIMutI CAGTG 5 cut(s) 383, 643, 858, 1249, 1372
BveI ACCTGC 1 cut(s) 331
CfoI GCGC 1 cut(s) 346
Cfr13I GGNCC 5 cut(s) 471, 572, 954, 1346, 1553
CseI GACGC 3 cut(s) 169, 394, 1052
Csp6I GTAC 2 cut(s) 595, 1455
CviAII CATG 6 cut(s) 282, 291, 584, 716, 778, 919
CviQI GTAC 2 cut(s) 595, 1455
DdeI CTNAG 7 cut(s) 236, 482, 517, 655, 1282, 1401, 1467
DpnI GATC 7 cut(s) 228, 644, 1207, 1241, 1297, 1420, 1526
DpnII GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
DriI GACNNNNNGTC 1 cut(s) 781
EaeI YGGCCR 2 cut(s) 580, 1264
Eam1104I CTCTTC 2 cut(s) 365, 765
Eam1105I GACNNNNNGTC 1 cut(s) 781
EarI CTCTTC 2 cut(s) 365, 765
Ecl136II GAGCTC 1 cut(s) 754
Eco130I CCWWGG 2 cut(s) 906, 1414
Eco147I AGGCCT 1 cut(s) 824
Eco24I GRGCYC 1 cut(s) 756
Eco31I GGTCTC 1 cut(s) 1115
Eco47I GGWCC 3 cut(s) 471, 1346, 1553
Eco53kI GAGCTC 1 cut(s) 754
Eco72I CACGTG 1 cut(s) 836
EcoICRI GAGCTC 1 cut(s) 754
EcoO109I RGGNCCY 2 cut(s) 572, 1553
EcoRII CCWGG 1 cut(s) 819
EcoT14I CCWWGG 2 cut(s) 906, 1414
EcoT38I GRGCYC 1 cut(s) 756
ErhI CCWWGG 2 cut(s) 906, 1414
Esp3I CGTCTC 2 cut(s) 412, 907
FaeI CATG 6 cut(s) 285, 294, 587, 719, 781, 922
FaqI GGGAC 1 cut(s) 1332
FatI CATG 6 cut(s) 281, 290, 583, 715, 777, 918
FauI CCCGC 3 cut(s) 31, 1490, 1551
FbaI TGATCA 1 cut(s) 1239
FblI GTMKAC 1 cut(s) 706
Fnu4HI GCNGC 3 cut(s) 198, 1248, 1267
FokI GGATG 2 cut(s) 381, 397
FriOI GRGCYC 1 cut(s) 756
Fsp4HI GCNGC 3 cut(s) 198, 1248, 1267
FspBI CTAG 1 cut(s) 882
GlaI GCGC 1 cut(s) 345
GluI GCNGC 3 cut(s) 198, 1248, 1267
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 6 cut(s) 164, 574, 582, 824, 956, 1266
HapII CCGG 2 cut(s) 957, 1528
HgaI GACGC 3 cut(s) 169, 394, 1052
HhaI GCGC 1 cut(s) 346
Hin1I GRCGYC 1 cut(s) 180
Hin1II CATG 6 cut(s) 285, 294, 587, 719, 781, 922
Hin6I GCGC 1 cut(s) 344
HinP1I GCGC 1 cut(s) 344
HincII GTYRAC 2 cut(s) 265, 775
HindII GTYRAC 2 cut(s) 265, 775
HinfI GANTC 4 cut(s) 57, 515, 587, 839
HpaII CCGG 2 cut(s) 957, 1528
HphI GGTGA 4 cut(s) 88, 582, 639, 1466
Hpy166II GTNNAC 3 cut(s) 265, 707, 775
Hpy188I TCNGA 9 cut(s) 423, 520, 552, 799, 844, 1239, 1285, 1295, 1423
Hpy188III TCNNGA 4 cut(s) 252, 440, 664, 1528
Hpy8I GTNNAC 3 cut(s) 265, 707, 775
HpyCH4III ACNGT 8 cut(s) 262, 301, 460, 493, 594, 772, 1255, 1362
HpyCH4IV ACGT 3 cut(s) 743, 835, 1014
HpyF10VI GCNNNNNNNGC 1 cut(s) 35
HpyF3I CTNAG 7 cut(s) 236, 482, 517, 655, 1282, 1401, 1467
HpySE526I ACGT 3 cut(s) 743, 835, 1014
Hsp92I GRCGYC 1 cut(s) 180
Hsp92II CATG 6 cut(s) 285, 294, 587, 719, 781, 922
HspAI GCGC 1 cut(s) 344
Kpn2I TCCGGA 1 cut(s) 1527
Ksp22I TGATCA 1 cut(s) 1239
Kzo9I GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
LmnI GCTCC 3 cut(s) 883, 911, 1530
Lsp1109I GCAGC 2 cut(s) 184, 1259
LweI GCATC 3 cut(s) 403, 983, 1138
MaeI CTAG 1 cut(s) 882
MaeII ACGT 3 cut(s) 743, 835, 1014
MaeIII GTNAC 2 cut(s) 76, 829
MalI GATC 7 cut(s) 228, 644, 1207, 1241, 1297, 1420, 1526
MboI GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
MfeI CAATTG 2 cut(s) 981, 1116
MflI RGATCY 3 cut(s) 642, 1295, 1418
MhlI GDGCHC 1 cut(s) 756
MlsI TGGCCA 1 cut(s) 582
MluCI AATT 7 cut(s) 42, 184, 684, 981, 1116, 1287, 1379
MluNI TGGCCA 1 cut(s) 582
MlyI GAGTC 1 cut(s) 509
MmeI TCCRAC 1 cut(s) 1446
Mox20I TGGCCA 1 cut(s) 582
MroI TCCGGA 1 cut(s) 1527
MscI TGGCCA 1 cut(s) 582
MseI TTAA 3 cut(s) 687, 1323, 1567
MslI CAYNNNNRTG 3 cut(s) 174, 339, 388
Msp20I TGGCCA 1 cut(s) 582
MspI CCGG 2 cut(s) 957, 1528
MspR9I CCNGG 1 cut(s) 821
MunI CAATTG 2 cut(s) 981, 1116
MvaI CCWGG 1 cut(s) 821
MvnI CGCG 1 cut(s) 1491
MwoI GCNNNNNNNGC 1 cut(s) 35
NdeII GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
NlaIII CATG 6 cut(s) 285, 294, 587, 719, 781, 922
NlaIV GGNNCC 4 cut(s) 573, 1348, 1420, 1554
NmuCI GTSAC 2 cut(s) 76, 829
NspI RCATGY 2 cut(s) 285, 719
PceI AGGCCT 1 cut(s) 824
PciI ACATGT 1 cut(s) 715
PfeI GAWTC 3 cut(s) 57, 587, 839
PkrI GCNGC 3 cut(s) 199, 1249, 1268
PleI GAGTC 1 cut(s) 509
PmaCI CACGTG 1 cut(s) 836
PmlI CACGTG 1 cut(s) 836
PpsI GAGTC 1 cut(s) 509
Ppu21I YACGTR 1 cut(s) 836
PpuMI RGGWCCY 1 cut(s) 1553
PscI ACATGT 1 cut(s) 715
Psp124BI GAGCTC 1 cut(s) 756
Psp5II RGGWCCY 1 cut(s) 1553
Psp6I CCWGG 1 cut(s) 819
PspCI CACGTG 1 cut(s) 836
PspGI CCWGG 1 cut(s) 819
PspN4I GGNNCC 4 cut(s) 573, 1348, 1420, 1554
PspPI GGNCC 5 cut(s) 471, 572, 954, 1346, 1553
PspPPI RGGWCCY 1 cut(s) 1553
PstI CTGCAG 1 cut(s) 511
PsuI RGATCY 3 cut(s) 642, 1295, 1418
RsaI GTAC 2 cut(s) 596, 1456
RsaNI GTAC 2 cut(s) 595, 1455
RseI CAYNNNNRTG 3 cut(s) 174, 339, 388
SacI GAGCTC 1 cut(s) 756
SaqAI TTAA 3 cut(s) 687, 1323, 1567
SatI GCNGC 3 cut(s) 198, 1248, 1267
Sau3AI GATC 7 cut(s) 226, 642, 1205, 1239, 1295, 1418, 1524
Sau96I GGNCC 5 cut(s) 471, 572, 954, 1346, 1553
SchI GAGTC 1 cut(s) 509
ScrFI CCNGG 1 cut(s) 821
SduI GDGCHC 1 cut(s) 756
SfaNI GCATC 3 cut(s) 403, 983, 1138
SfcI CTRYAG 2 cut(s) 507, 1358
SinI GGWCC 3 cut(s) 471, 1346, 1553
SmiMI CAYNNNNRTG 3 cut(s) 174, 339, 388
SmlI CTYRAG 4 cut(s) 601, 664, 1317, 1547
SmoI CTYRAG 4 cut(s) 601, 664, 1317, 1547
Sse9I AATT 7 cut(s) 42, 184, 684, 981, 1116, 1287, 1379
SseBI AGGCCT 1 cut(s) 824
SsiI CCGC 6 cut(s) 38, 710, 1267, 1483, 1489, 1544
SspI AATATT 1 cut(s) 210
SspMI CTAG 1 cut(s) 882
SstI GAGCTC 1 cut(s) 756
StuI AGGCCT 1 cut(s) 824
StyD4I CCNGG 1 cut(s) 819
StyI CCWWGG 2 cut(s) 906, 1414
TaaI ACNGT 8 cut(s) 262, 301, 460, 493, 594, 772, 1255, 1362
TaiI ACGT 3 cut(s) 746, 838, 1017
TaqI TCGA 1 cut(s) 682
TasI AATT 7 cut(s) 42, 184, 684, 981, 1116, 1287, 1379
TauI GCSGC 1 cut(s) 1269
TfiI GAWTC 3 cut(s) 57, 587, 839
Tru1I TTAA 3 cut(s) 687, 1323, 1567
Tru9I TTAA 3 cut(s) 687, 1323, 1567
TscAI CASTG 5 cut(s) 390, 643, 858, 1249, 1372
TseFI GTSAC 2 cut(s) 76, 829
TseI GCWGC 2 cut(s) 197, 1247
Tsp45I GTSAC 2 cut(s) 76, 829
TspDTI ATGAA 5 cut(s) 343, 600, 624, 707, 1236
TspGWI ACGGA 1 cut(s) 889
TspRI CASTG 5 cut(s) 390, 643, 858, 1249, 1372
VpaK11BI GGWCC 3 cut(s) 471, 1346, 1553
XapI RAATTY 2 cut(s) 1287, 1379
XceI RCATGY 2 cut(s) 285, 719
XcmI CCANNNNNNNNNTGG 1 cut(s) 775
XmiI GTMKAC 1 cut(s) 706
XspI CTAG 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.