Rh7DG315800

Ferric reduction oxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0017311
Physical Location & Seq
Reverse (-)
37068247 .. 37072466
4220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG315800.1

Sequence Viewer

Length: 2226 bp
ATGGCCGTGGACGATTTACACTCTGCTCTTATTTCCAATGGCGCCGGAGGTTATGCCAAGCAGACCCAGCAGAGGAGCTTCCTTTTTTCACTGGCCAAATGGGTTCTCAAATCTGCAATGTGGCTCATATTCGTTGCCTGGATTGTTCTCTTCTTCATTATACCTTCCGACTTCGGCTCCACTTTCTATACTGATTGGGTTGCTGCCACCGATGGGACTCTGTTTGGAGAGAGTGGGAGTGTGTTGATGTTATACAGTGCTCCGATTATCGCTATTGCTTTTCTTGCTGTTCCCTATATCATCTTTTTCGAGGAAGATGAAGAAGAGTATCAAGAGAAGAAGAAGGCGAAGTTCAGCCTATGGACCTTTCCTGTTCTGGTGGATGGACCACTTGGAGTTGTTTCCGCCGCGGAAATGATTGGCATTATTCTCTTTATTGTGTTTGTTCTCTCGGCGCTGTATTTTTACACTGTATCCAACTTCGAGATGTTACCTGACTATGGTGATGATTTGACCGATGGAGAGAAAAGGGTTTTTATGTTGCAAATGTCAGCTTATTGCTTTGGTTTGATAGTCTTGTCTTGCCTGGCATTCCTGTTTCTCCCAATTACAAGGGGATCAATTCTTCTCCGCCTTATTGATATACCATTCGAGCATGCGACCAGATATCATGTATGGTTGGGGAATCTCATATTCTTCCTTGTTACTATGCATGGACTCTGCTATATGATTGTGTGGGCGATACGAGGCATCATTCCATCTGAAGTAGTAGAGTGGAAAAGTGATGGTGGTGCAAACTTGGCGGGAATTATTTGCTATGGAATCTTTCTGTTGATTTGGGTGACAACACTTCCTCCTGTGAGAAAGCGATATTTTGAGCTTTTTTACTATACCCATCAACTCTATGTTTTGTTTGTCATCTTCTTGGCCTTGCATATTGGTGGCGTCAATTTCAGCCAAGCTGCTGGAGGAATATTTCTTTTTATGCTGGATCGCTTTCTAAGGTTCTGCCAATCACGAAAGACGGTCAACATAGTTTCAGCAACATGCTTTCCATGTGGAACTGTCAAGTTGGTGCTTCCAAAACCTGCAAACTTGCACTACAATGCGCTTGGTTTCATCTTTCTTCAAGTGAAGAGTATATCTTCACTGCAATGGCATCCTTTCAGCGTCTCATCCAGTCCTCTGAATGGTAAATATCATCTTGAAGTCCTCATAAAGACTGTTGGGGAATGGACCACAAAGCTAAGGGAAACAGTCTCCAAGACTTCTGCAGAGGACTCAGATATACAGCTTCCACACACTCCTGCTCATCAGATTATGGCTTCTGTTGAGGGGCCTTATGGCCATGAATCACCGTACTACTTGAGGTATGAAAAACTTGTCTTGGTAGCAGGAGGCAGTGGGATCTCACCATTCTTAGCTATCTTGAGTGATATTCTCCATCGAATTAAGATGAACAAACCTTGTCGACCGCAACATGTATTGCTTGTTTGGGCTATCAAAACGTCAAATGAGCTCTCTCTTCTTTCCACAGTTGACATGGGGTCTATGGATTTTTCTGATAGATTGAATATTGAAATCCAGGCCTATGTCACACGTGAATCAGAATGTCCAGTGGAAGATGGTAGATTTTACAACGCTCCTAGTTCTTCTGTTTTCTCCGTCTCCAAGGGAGCAACCATGTCAGTTTTGACTGGCACAGGAAACAAGATATGGGCCGGAACTTATGTTATTGCATCTACAATTGGGTTTGTTATTGTTTTGAGCTTGTTGGACGTATTCTACATAAACCCTTACAGCATAGACGCTTGGTGGTATTTAGGGCTTCTTTTTGTGATATGTATGGTTGCAAGTGTTCTTATATTTGGAGGTCTCACAATTGGATTATGGCATCTTTGGGAAAGAAAAACCTCATTCCAAGAGAGTTCGGAAAATGGGAATACTGAAATAGTGCAGAGTAATGGAAGACCGACAGACACAAATGAATACCAGAAAACTCTGATCAGTGCAGCCACAGTTCGGTATGGCCGCAGACCAGACTTCTCAGAAATTTTCGGATCTTTAGCACAACATTCGGCTCAAGTTAATGTTGGTGTCTTCGTGTGTGGTCCCACAACTCTACAGTCCAGTGTTGCTAAAGAATGTAGGTCACAGAATCTAGGAAGAAGAAGAAAAGGCAACAGCCCAGTATTCCATTACAACAGCCATAGTTTTGATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

741

Amino Acids

83.01

Weight (kDa)

6.53

Isoelectric Point (pI)

42.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferric_reduct PF01794 188 - 309 1.8e-22 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 342 - 451 3.2e-18 FAD-binding domain
NAD_binding_6 PF08030 458 - 716 3.6e-23 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017311)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g27140
rosa_chinensis RchiOBHm_Chr7g0218141
rosa_laevigata RLG00000002396
rosa_multiflora Rmu_co8413095.1_g000001 Rmu_sc0003627.1_g000011 Rmu_sc0031732.1_g000001
rosa_roxburghii Rroxscaffold_3G00241270
rosa_rugosa Rorug07G0174500
rosa_samantha Rh7AG317000 Rh7BG308100 Rh7CG333800 Rh7DG315800
rosa_wichuraiana Rw7G026820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1096
AccB1I GGYRCC 1 cut(s) 41
AccI GTMKAC 1 cut(s) 1471
AccII CGCG 1 cut(s) 410
AciI CCGC 7 cut(s) 405, 408, 410, 631, 803, 1475, 2032
AclWI GGATC 4 cut(s) 625, 999, 1415, 2068
AcoI YGGCCR 4 cut(s) 3, 93, 1345, 2029
AcsI RAATTY 1 cut(s) 2052
AcuI CTGAAG 1 cut(s) 783
AcvI CACGTG 1 cut(s) 1601
AcyI GRCGYC 2 cut(s) 42, 945
AfaI GTAC 1 cut(s) 1361
AfiI CCNNNNNNNGG 5 cut(s) 72, 213, 500, 1190, 2022
AflIII ACRYGT 2 cut(s) 1480, 1598
AgsI TTSAA 4 cut(s) 1130, 1208, 1573, 1580
AhdI GACNNNNNGTC 1 cut(s) 1546
AjnI CCWGG 3 cut(s) 137, 585, 1584
AluBI AGCT 9 cut(s) 78, 554, 880, 962, 1246, 1294, 1424, 1519, 1770
AluI AGCT 9 cut(s) 78, 554, 880, 962, 1246, 1294, 1424, 1519, 1770
Alw21I GWGCWC 2 cut(s) 262, 1521
Alw26I GTCTC 4 cut(s) 1177, 1264, 1672, 1880
AlwI GGATC 4 cut(s) 625, 999, 1415, 2068
AoxI GGCC 8 cut(s) 3, 93, 927, 1337, 1345, 1587, 1719, 2029
ApeKI GCWGC 3 cut(s) 203, 962, 2012
ApoI RAATTY 1 cut(s) 2052
AspLEI GCGC 3 cut(s) 44, 457, 1111
AspS9I GGNCC 6 cut(s) 363, 386, 1236, 1337, 1719, 2111
AsuHPI GGTGA 4 cut(s) 515, 853, 1347, 1404
AvaII GGWCC 4 cut(s) 363, 386, 1236, 2111
BalI TGGCCA 2 cut(s) 95, 1347
BanI GGYRCC 1 cut(s) 41
BanII GRGCYC 1 cut(s) 1521
BbrPI CACGTG 1 cut(s) 1601
BbsI GAAGAC 2 cut(s) 1975, 2092
Bbv12I GWGCWC 2 cut(s) 262, 1521
BbvI GCAGC 3 cut(s) 190, 949, 2024
BccI CCATC 8 cut(s) 206, 377, 512, 766, 779, 903, 1452, 1619
BcgI CGANNNNNNTGC 2 cut(s) 2058, 2092
BciT130I CCWGG 3 cut(s) 139, 587, 1586
BciVI GTATCC 1 cut(s) 484
BclI TGATCA 1 cut(s) 2004
BcoDI GTCTC 4 cut(s) 1177, 1264, 1672, 1880
BfaI CTAG 2 cut(s) 1647, 2162
BfmI CTRYAG 2 cut(s) 1272, 2123
BfoI RGCGCY 2 cut(s) 45, 458
BfuAI ACCTGC 1 cut(s) 1096
BfuI GTATCC 1 cut(s) 484
BisI GCNGC 5 cut(s) 204, 408, 963, 2013, 2032
BlsI GCNGC 5 cut(s) 205, 409, 964, 2014, 2033
Bme1390I CCNGG 3 cut(s) 139, 587, 1586
Bme18I GGWCC 4 cut(s) 363, 386, 1236, 2111
BmeRI GACNNNNNGTC 1 cut(s) 1546
BmgT120I GGNCC 6 cut(s) 363, 386, 1236, 1337, 1719, 2111
BmiI GGNNCC 4 cut(s) 43, 178, 1338, 2113
BmrFI CCNGG 3 cut(s) 139, 587, 1586
BmrI ACTGGG 1 cut(s) 2183
BmsI GCATC 4 cut(s) 759, 1168, 1748, 1903
BmuI ACTGGG 1 cut(s) 2183
BpiI GAAGAC 2 cut(s) 1975, 2092
BpmI CTGGAG 1 cut(s) 987
Bpu10I CCTNAGC 1 cut(s) 1247
BpuEI CTTGAG 3 cut(s) 1387, 1450, 2067
BsaAI YACGTR 1 cut(s) 1601
BsaHI GRCGYC 2 cut(s) 42, 945
BsaI GGTCTC 1 cut(s) 1880
BsaJI CCNNGG 3 cut(s) 6, 408, 1671
BsaXI ACNNNNNCTCC 4 cut(s) 161, 191, 838, 868
Bsc4I CCNNNNNNNGG 5 cut(s) 72, 213, 500, 1190, 2022
Bse1I ACTGG 6 cut(s) 96, 1179, 1616, 1702, 2130, 2189
Bse3DI GCAATG 2 cut(s) 123, 1160
BseBI CCWGG 3 cut(s) 139, 587, 1586
BseDI CCNNGG 3 cut(s) 6, 408, 1671
BseGI GGATG 3 cut(s) 388, 1159, 1175
BseLI CCNNNNNNNGG 5 cut(s) 72, 213, 500, 1190, 2022
BseMI GCAATG 2 cut(s) 123, 1160
BseMII CTCAG 2 cut(s) 1296, 2061
BseNI ACTGG 6 cut(s) 96, 1179, 1616, 1702, 2130, 2189
BseRI GAGGAG 1 cut(s) 88
BseXI GCAGC 3 cut(s) 190, 949, 2024
BseYI CCCAGC 1 cut(s) 66
BsgI GTGCAG 2 cut(s) 1976, 2031
Bsh1236I CGCG 1 cut(s) 410
Bsh1285I CGRYCG 1 cut(s) 1475
BshFI GGCC 8 cut(s) 5, 95, 929, 1339, 1347, 1589, 1721, 2031
BshNI GGYRCC 1 cut(s) 41
BsiEI CGRYCG 1 cut(s) 1475
BsiHKAI GWGCWC 2 cut(s) 262, 1521
BsiSI CCGG 2 cut(s) 45, 1722
BslFI GGGAC 2 cut(s) 229, 2097
BslI CCNNNNNNNGG 5 cut(s) 72, 213, 500, 1190, 2022
BsmAI GTCTC 4 cut(s) 1177, 1264, 1672, 1880
BsmBI CGTCTC 2 cut(s) 1177, 1672
BsmFI GGGAC 2 cut(s) 229, 2097
BsmI GAATGC 1 cut(s) 590
BsnI GGCC 8 cut(s) 5, 95, 929, 1339, 1347, 1589, 1721, 2031
Bso31I GGTCTC 1 cut(s) 1880
Bsp1286I GDGCHC 2 cut(s) 262, 1521
Bsp143I GATC 5 cut(s) 617, 991, 1407, 2004, 2060
BspACI CCGC 7 cut(s) 405, 408, 410, 631, 803, 1475, 2032
BspANI GGCC 8 cut(s) 5, 95, 929, 1339, 1347, 1589, 1721, 2031
BspCNI CTCAG 2 cut(s) 1295, 2060
BspFNI CGCG 1 cut(s) 410
BspLI GGNNCC 4 cut(s) 43, 178, 1338, 2113
BspMAI CTGCAG 1 cut(s) 1276
BspMI ACCTGC 1 cut(s) 1096
BspPI GGATC 4 cut(s) 625, 999, 1415, 2068
BspT107I GGYRCC 1 cut(s) 41
BspTNI GGTCTC 1 cut(s) 1880
BsrDI GCAATG 2 cut(s) 123, 1160
BsrI ACTGG 6 cut(s) 96, 1179, 1616, 1702, 2130, 2189
BssECI CCNNGG 3 cut(s) 6, 408, 1671
BssMI GATC 5 cut(s) 617, 991, 1407, 2004, 2060
BssNI GRCGYC 2 cut(s) 42, 945
BssT1I CCWWGG 1 cut(s) 1671
Bst2UI CCWGG 3 cut(s) 139, 587, 1586
Bst6I CTCTTC 4 cut(s) 155, 318, 1130, 1530
BstACI GRCGYC 2 cut(s) 42, 945
BstBAI YACGTR 1 cut(s) 1601
BstC8I GCNNGC 1 cut(s) 657
BstDEI CTNAG 5 cut(s) 1001, 1247, 1282, 1420, 2047
BstDSI CCRYGG 2 cut(s) 6, 408
BstF5I GGATG 3 cut(s) 388, 1159, 1175
BstFNI CGCG 1 cut(s) 410
BstH2I RGCGCY 2 cut(s) 45, 458
BstHHI GCGC 3 cut(s) 44, 457, 1111
BstKTI GATC 5 cut(s) 620, 994, 1410, 2007, 2063
BstMAI GTCTC 4 cut(s) 1177, 1264, 1672, 1880
BstMBI GATC 5 cut(s) 617, 991, 1407, 2004, 2060
BstMCI CGRYCG 1 cut(s) 1475
BstMWI GCNNNNNNNGC 3 cut(s) 67, 284, 800
BstNI CCWGG 3 cut(s) 139, 587, 1586
BstNSI RCATGY 3 cut(s) 659, 1050, 1484
BstSCI CCNGG 3 cut(s) 137, 585, 1584
BstSFI CTRYAG 2 cut(s) 1272, 2123
BstUI CGCG 1 cut(s) 410
BstV1I GCAGC 3 cut(s) 190, 949, 2024
BstV2I GAAGAC 2 cut(s) 1975, 2092
BstX2I RGATCY 2 cut(s) 1407, 2060
BstXI CCANNNNNNTGG 1 cut(s) 965
BstYI RGATCY 2 cut(s) 1407, 2060
BsuI GTATCC 1 cut(s) 484
BsuRI GGCC 8 cut(s) 5, 95, 929, 1339, 1347, 1589, 1721, 2031
BtgI CCRYGG 2 cut(s) 6, 408
BtsCI GGATG 3 cut(s) 388, 1159, 1175
BtsI GCAGTG 2 cut(s) 1148, 1408
BtsIMutI CAGTG 8 cut(s) 89, 262, 468, 1148, 1408, 1623, 2014, 2137
BveI ACCTGC 1 cut(s) 1096
Cac8I GCNNGC 1 cut(s) 657
CfoI GCGC 3 cut(s) 44, 457, 1111
Cfr13I GGNCC 6 cut(s) 363, 386, 1236, 1337, 1719, 2111
Cfr42I CCGCGG 1 cut(s) 411
CseI GACGC 3 cut(s) 934, 1159, 1817
Csp6I GTAC 1 cut(s) 1360
CviAII CATG 9 cut(s) 656, 671, 713, 1047, 1056, 1349, 1481, 1543, 1684
CviQI GTAC 1 cut(s) 1360
DdeI CTNAG 5 cut(s) 1001, 1247, 1282, 1420, 2047
DinI GGCGCC 1 cut(s) 43
DpnI GATC 5 cut(s) 619, 993, 1409, 2006, 2062
DpnII GATC 5 cut(s) 617, 991, 1407, 2004, 2060
DriI GACNNNNNGTC 1 cut(s) 1546
EaeI YGGCCR 4 cut(s) 3, 93, 1345, 2029
Eam1104I CTCTTC 4 cut(s) 155, 318, 1130, 1530
Eam1105I GACNNNNNGTC 1 cut(s) 1546
EarI CTCTTC 4 cut(s) 155, 318, 1130, 1530
EciI GGCGGA 2 cut(s) 394, 620
Ecl136II GAGCTC 1 cut(s) 1519
Eco130I CCWWGG 1 cut(s) 1671
Eco147I AGGCCT 1 cut(s) 1589
Eco24I GRGCYC 1 cut(s) 1521
Eco31I GGTCTC 1 cut(s) 1880
Eco32I GATATC 1 cut(s) 668
Eco47I GGWCC 4 cut(s) 363, 386, 1236, 2111
Eco53kI GAGCTC 1 cut(s) 1519
Eco57I CTGAAG 1 cut(s) 783
Eco72I CACGTG 1 cut(s) 1601
EcoICRI GAGCTC 1 cut(s) 1519
EcoO109I RGGNCCY 1 cut(s) 1337
EcoRII CCWGG 3 cut(s) 137, 585, 1584
EcoRV GATATC 1 cut(s) 668
EcoT14I CCWWGG 1 cut(s) 1671
EcoT22I ATGCAT 1 cut(s) 714
EcoT38I GRGCYC 1 cut(s) 1521
EgeI GGCGCC 1 cut(s) 43
EheI GGCGCC 1 cut(s) 43
ErhI CCWWGG 1 cut(s) 1671
Esp3I CGTCTC 2 cut(s) 1177, 1672
FaeI CATG 9 cut(s) 659, 674, 716, 1050, 1059, 1352, 1484, 1546, 1687
FaqI GGGAC 2 cut(s) 229, 2097
FatI CATG 9 cut(s) 655, 670, 712, 1046, 1055, 1348, 1480, 1542, 1683
FauI CCCGC 1 cut(s) 796
FbaI TGATCA 1 cut(s) 2004
FblI GTMKAC 1 cut(s) 1471
Fnu4HI GCNGC 5 cut(s) 204, 408, 963, 2013, 2032
FokI GGATG 3 cut(s) 395, 1146, 1162
FriOI GRGCYC 1 cut(s) 1521
Fsp4HI GCNGC 5 cut(s) 204, 408, 963, 2013, 2032
FspBI CTAG 2 cut(s) 1647, 2162
GlaI GCGC 3 cut(s) 43, 456, 1110
GluI GCNGC 5 cut(s) 204, 408, 963, 2013, 2032
GsaI CCCAGC 1 cut(s) 70
GsuI CTGGAG 1 cut(s) 987
HaeII RGCGCY 2 cut(s) 45, 458
HaeIII GGCC 8 cut(s) 5, 95, 929, 1339, 1347, 1589, 1721, 2031
HapII CCGG 2 cut(s) 45, 1722
HgaI GACGC 3 cut(s) 934, 1159, 1817
HhaI GCGC 3 cut(s) 44, 457, 1111
Hin1I GRCGYC 2 cut(s) 42, 945
Hin1II CATG 9 cut(s) 659, 674, 716, 1050, 1059, 1352, 1484, 1546, 1687
Hin6I GCGC 3 cut(s) 42, 455, 1109
HinP1I GCGC 3 cut(s) 42, 455, 1109
HincII GTYRAC 3 cut(s) 1030, 1472, 1540
HindII GTYRAC 3 cut(s) 1030, 1472, 1540
HinfI GANTC 8 cut(s) 217, 685, 717, 822, 1280, 1352, 1604, 2158
HpaII CCGG 2 cut(s) 45, 1722
HphI GGTGA 4 cut(s) 515, 853, 1347, 1404
Hpy166II GTNNAC 4 cut(s) 10, 1030, 1472, 1540
Hpy188III TCNNGA 5 cut(s) 332, 484, 1017, 1205, 1429
Hpy8I GTNNAC 4 cut(s) 10, 1030, 1472, 1540
HpyAV CCTTC 2 cut(s) 174, 337
HpyCH4IV ACGT 3 cut(s) 1508, 1600, 1779
HpyF10VI GCNNNNNNNGC 3 cut(s) 67, 284, 800
HpyF3I CTNAG 5 cut(s) 1001, 1247, 1282, 1420, 2047
HpySE526I ACGT 3 cut(s) 1508, 1600, 1779
Hsp92I GRCGYC 2 cut(s) 42, 945
Hsp92II CATG 9 cut(s) 659, 674, 716, 1050, 1059, 1352, 1484, 1546, 1687
HspAI GCGC 3 cut(s) 42, 455, 1109
KasI GGCGCC 1 cut(s) 41
Ksp22I TGATCA 1 cut(s) 2004
KspI CCGCGG 1 cut(s) 411
Kzo9I GATC 5 cut(s) 617, 991, 1407, 2004, 2060
LmnI GCTCC 5 cut(s) 75, 182, 265, 1648, 1676
Lsp1109I GCAGC 3 cut(s) 190, 949, 2024
LweI GCATC 4 cut(s) 759, 1168, 1748, 1903
MaeI CTAG 2 cut(s) 1647, 2162
MaeII ACGT 3 cut(s) 1508, 1600, 1779
MaeIII GTNAC 5 cut(s) 489, 703, 841, 1594, 2151
MalI GATC 5 cut(s) 619, 993, 1409, 2006, 2062
MboI GATC 5 cut(s) 617, 991, 1407, 2004, 2060
MfeI CAATTG 2 cut(s) 1746, 1881
MflI RGATCY 2 cut(s) 1407, 2060
MhlI GDGCHC 2 cut(s) 262, 1521
MlsI TGGCCA 2 cut(s) 95, 1347
MluCI AATT 8 cut(s) 606, 621, 807, 949, 1449, 1746, 1881, 2052
MluNI TGGCCA 2 cut(s) 95, 1347
Mly113I GGCGCC 1 cut(s) 42
MlyI GAGTC 3 cut(s) 211, 711, 1274
MmeI TCCRAC 3 cut(s) 192, 501, 1755
Mox20I TGGCCA 2 cut(s) 95, 1347
Mph1103I ATGCAT 1 cut(s) 714
MscI TGGCCA 2 cut(s) 95, 1347
MseI TTAA 2 cut(s) 1452, 2088
MslI CAYNNNNRTG 3 cut(s) 939, 1104, 1153
Msp20I TGGCCA 2 cut(s) 95, 1347
MspA1I CMGCKG 1 cut(s) 410
MspI CCGG 2 cut(s) 45, 1722
MspR9I CCNGG 3 cut(s) 139, 587, 1586
MunI CAATTG 2 cut(s) 1746, 1881
Mva1269I GAATGC 1 cut(s) 590
MvaI CCWGG 3 cut(s) 139, 587, 1586
MvnI CGCG 1 cut(s) 410
MwoI GCNNNNNNNGC 3 cut(s) 67, 284, 800
NarI GGCGCC 1 cut(s) 42
NdeII GATC 5 cut(s) 617, 991, 1407, 2004, 2060
NlaIII CATG 9 cut(s) 659, 674, 716, 1050, 1059, 1352, 1484, 1546, 1687
NlaIV GGNNCC 4 cut(s) 43, 178, 1338, 2113
NmeAIII GCCGAG 1 cut(s) 431
NmuCI GTSAC 3 cut(s) 841, 1594, 2151
NsiI ATGCAT 1 cut(s) 714
NspI RCATGY 3 cut(s) 659, 1050, 1484
PaeI GCATGC 1 cut(s) 659
PceI AGGCCT 1 cut(s) 1589
PciI ACATGT 1 cut(s) 1480
PctI GAATGC 1 cut(s) 590
PfeI GAWTC 5 cut(s) 685, 822, 1352, 1604, 2158
PkrI GCNGC 5 cut(s) 205, 409, 964, 2014, 2033
PleI GAGTC 3 cut(s) 211, 711, 1274
PluTI GGCGCC 1 cut(s) 45
PmaCI CACGTG 1 cut(s) 1601
PmlI CACGTG 1 cut(s) 1601
PpsI GAGTC 3 cut(s) 211, 711, 1274
Ppu21I YACGTR 1 cut(s) 1601
PscI ACATGT 1 cut(s) 1480
Psp124BI GAGCTC 1 cut(s) 1521
Psp6I CCWGG 3 cut(s) 137, 585, 1584
PspCI CACGTG 1 cut(s) 1601
PspFI CCCAGC 1 cut(s) 66
PspGI CCWGG 3 cut(s) 137, 585, 1584
PspN4I GGNNCC 4 cut(s) 43, 178, 1338, 2113
PspPI GGNCC 6 cut(s) 363, 386, 1236, 1337, 1719, 2111
PstI CTGCAG 1 cut(s) 1276
PsuI RGATCY 2 cut(s) 1407, 2060
RsaI GTAC 1 cut(s) 1361
RsaNI GTAC 1 cut(s) 1360
RseI CAYNNNNRTG 3 cut(s) 939, 1104, 1153
SacI GAGCTC 1 cut(s) 1521
SacII CCGCGG 1 cut(s) 411
SalI GTCGAC 1 cut(s) 1470
SaqAI TTAA 2 cut(s) 1452, 2088
SatI GCNGC 5 cut(s) 204, 408, 963, 2013, 2032
Sau3AI GATC 5 cut(s) 617, 991, 1407, 2004, 2060
Sau96I GGNCC 6 cut(s) 363, 386, 1236, 1337, 1719, 2111
SchI GAGTC 3 cut(s) 211, 711, 1274
ScrFI CCNGG 3 cut(s) 139, 587, 1586
SduI GDGCHC 2 cut(s) 262, 1521
SfaNI GCATC 4 cut(s) 759, 1168, 1748, 1903
SfcI CTRYAG 2 cut(s) 1272, 2123
SfoI GGCGCC 1 cut(s) 43
Sfr303I CCGCGG 1 cut(s) 411
SgrBI CCGCGG 1 cut(s) 411
SinI GGWCC 4 cut(s) 363, 386, 1236, 2111
SmiMI CAYNNNNRTG 3 cut(s) 939, 1104, 1153
SmlI CTYRAG 3 cut(s) 1366, 1429, 2082
SmoI CTYRAG 3 cut(s) 1366, 1429, 2082
SphI GCATGC 1 cut(s) 659
Sse9I AATT 8 cut(s) 606, 621, 807, 949, 1449, 1746, 1881, 2052
SseBI AGGCCT 1 cut(s) 1589
SsiI CCGC 7 cut(s) 405, 408, 410, 631, 803, 1475, 2032
SspDI GGCGCC 1 cut(s) 41
SspI AATATT 2 cut(s) 975, 1576
SspMI CTAG 2 cut(s) 1647, 2162
SstI GAGCTC 1 cut(s) 1521
StuI AGGCCT 1 cut(s) 1589
StyD4I CCNGG 3 cut(s) 137, 585, 1584
StyI CCWWGG 1 cut(s) 1671
TaiI ACGT 3 cut(s) 1511, 1603, 1782
TaqI TCGA 5 cut(s) 309, 483, 651, 1447, 1471
TaqII GACCGA 2 cut(s) 530, 1987
TasI AATT 8 cut(s) 606, 621, 807, 949, 1449, 1746, 1881, 2052
TauI GCSGC 2 cut(s) 410, 2034
TfiI GAWTC 5 cut(s) 685, 822, 1352, 1604, 2158
Tru1I TTAA 2 cut(s) 1452, 2088
Tru9I TTAA 2 cut(s) 1452, 2088
TscAI CASTG 8 cut(s) 96, 262, 475, 1155, 1408, 1623, 2014, 2137
TseFI GTSAC 3 cut(s) 841, 1594, 2151
TseI GCWGC 3 cut(s) 203, 962, 2012
Tsp45I GTSAC 3 cut(s) 841, 1594, 2151
TspDTI ATGAA 7 cut(s) 145, 333, 1108, 1365, 1389, 1472, 2001
TspGWI ACGGA 1 cut(s) 1654
TspRI CASTG 8 cut(s) 96, 262, 475, 1155, 1408, 1623, 2014, 2137
VpaK11BI GGWCC 4 cut(s) 363, 386, 1236, 2111
XapI RAATTY 1 cut(s) 2052
XceI RCATGY 3 cut(s) 659, 1050, 1484
XcmI CCANNNNNNNNNTGG 1 cut(s) 1540
XmiI GTMKAC 1 cut(s) 1471
XspI CTAG 2 cut(s) 1647, 2162
Zsp2I ATGCAT 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.