Rorug07G0174500

Ferric reduction oxidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
14338423 .. 14338767
345 bp
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UTR
Exon/CDS
Intron
Rorug07G0174500.1

Sequence Viewer

Length: 330 bp
ATGTTTCTCTTCGACTGGTTCTACGGTGTGCTCGCTTCCCTCGGTGTGTGGCAGAAGGAGGCCAAGATCTTGTTCCTAGGGCTCGATAATGTCGGCAAGACCACCTTGCTTCACATGCTCAAAGATGAAAGGCTGGTGCATCATCAACCTACGCAATATCCCACATCCGAGGAGTTGAGTATTGGCAAAATCAAGTTCAAGGCCTTTGATTTGGGAGGTCATCAGATTGCTCGCAGGGTTTGGAAGGATTACTACGCAAAGGTAGATGCTGTGGTGTACCTTGTGGATGCCTACAATGGTTTTAAGTGGCTCTCTCAATACATTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

109

Amino Acids

12.76

Weight (kDa)

9.1

Isoelectric Point (pI)

19.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arf PF00025 8 - 99 3.2e-35 ADP-ribosylation factor family
Roc PF08477 22 - 98 1e-06 Ras of Complex, Roc, domain of DAPkinase
MMR_HSR1 PF01926 22 - 102 3.2e-06 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017311)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 278
AgsI TTSAA 1 cut(s) 199
AjuI GAANNNNNNNTTGG 2 cut(s) 56, 88
Alw21I GWGCWC 1 cut(s) 33
AoxI GGCC 2 cut(s) 60, 201
AspA2I CCTAGG 1 cut(s) 76
AvrII CCTAGG 1 cut(s) 76
BanII GRGCYC 1 cut(s) 84
BarI GAAGNNNNNNTAC 2 cut(s) 236, 268
Bbv12I GWGCWC 1 cut(s) 33
BfaI CTAG 1 cut(s) 77
BglII AGATCT 1 cut(s) 66
BlnI CCTAGG 1 cut(s) 76
BmsI GCATC 3 cut(s) 148, 256, 277
BsaJI CCNNGG 3 cut(s) 40, 76, 168
Bse1I ACTGG 1 cut(s) 20
BseDI CCNNGG 3 cut(s) 40, 76, 168
BseGI GGATG 2 cut(s) 164, 292
BseNI ACTGG 1 cut(s) 20
BseRI GAGGAG 1 cut(s) 185
BshFI GGCC 2 cut(s) 62, 203
BsiHKAI GWGCWC 1 cut(s) 33
BsnI GGCC 2 cut(s) 62, 203
Bsp1286I GDGCHC 2 cut(s) 33, 84
Bsp143I GATC 1 cut(s) 66
BspANI GGCC 2 cut(s) 62, 203
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 3 cut(s) 40, 76, 168
BssMI GATC 1 cut(s) 66
BssT1I CCWWGG 1 cut(s) 76
Bst4CI ACNGT 1 cut(s) 26
Bst6I CTCTTC 1 cut(s) 14
BstC8I GCNNGC 2 cut(s) 33, 232
BstF5I GGATG 2 cut(s) 164, 292
BstKTI GATC 1 cut(s) 69
BstMBI GATC 1 cut(s) 66
BstMWI GCNNNNNNNGC 1 cut(s) 115
BstNSI RCATGY 1 cut(s) 118
BstX2I RGATCY 1 cut(s) 66
BstYI RGATCY 1 cut(s) 66
BsuRI GGCC 2 cut(s) 62, 203
BtsCI GGATG 2 cut(s) 164, 292
Cac8I GCNNGC 2 cut(s) 33, 232
Csp6I GTAC 1 cut(s) 277
CviAII CATG 1 cut(s) 115
CviJI RGCY 5 cut(s) 62, 82, 133, 203, 310
CviKI_1 RGCY 5 cut(s) 62, 82, 133, 203, 310
CviQI GTAC 1 cut(s) 277
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 76
Eco147I AGGCCT 1 cut(s) 203
Eco24I GRGCYC 1 cut(s) 84
EcoT14I CCWWGG 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 84
ErhI CCWWGG 1 cut(s) 76
FaeI CATG 1 cut(s) 118
FaiI YATR 1 cut(s) 116
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FatI CATG 1 cut(s) 114
FokI GGATG 2 cut(s) 151, 299
FriOI GRGCYC 1 cut(s) 84
FspBI CTAG 1 cut(s) 77
HaeIII GGCC 2 cut(s) 62, 203
Hin1II CATG 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 277
Hpy188I TCNGA 2 cut(s) 169, 225
Hpy8I GTNNAC 1 cut(s) 277
HpyAV CCTTC 2 cut(s) 49, 238
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4V TGCA 1 cut(s) 139
HpyF10VI GCNNNNNNNGC 1 cut(s) 115
Hsp92II CATG 1 cut(s) 118
Kzo9I GATC 1 cut(s) 66
LpnPI CCDG 2 cut(s) 119, 220
LweI GCATC 3 cut(s) 148, 256, 277
MaeI CTAG 1 cut(s) 77
MalI GATC 1 cut(s) 68
MboI GATC 1 cut(s) 66
MflI RGATCY 1 cut(s) 66
MhlI GDGCHC 2 cut(s) 33, 84
MnlI CCTC 4 cut(s) 50, 52, 163, 209
MseI TTAA 2 cut(s) 303, 324
MwoI GCNNNNNNNGC 1 cut(s) 115
NdeII GATC 1 cut(s) 66
NlaIII CATG 1 cut(s) 118
NspI RCATGY 1 cut(s) 118
PceI AGGCCT 1 cut(s) 203
PsuI RGATCY 1 cut(s) 66
RsaI GTAC 1 cut(s) 278
RsaNI GTAC 1 cut(s) 277
SaqAI TTAA 2 cut(s) 303, 324
Sau3AI GATC 1 cut(s) 66
SduI GDGCHC 2 cut(s) 33, 84
SetI ASST 5 cut(s) 107, 151, 220, 264, 282
SfaNI GCATC 3 cut(s) 148, 256, 277
SseBI AGGCCT 1 cut(s) 203
SspMI CTAG 1 cut(s) 77
StuI AGGCCT 1 cut(s) 203
StyI CCWWGG 1 cut(s) 76
TaaI ACNGT 1 cut(s) 26
TaqI TCGA 2 cut(s) 12, 84
Tru1I TTAA 2 cut(s) 303, 324
Tru9I TTAA 2 cut(s) 303, 324
TspDTI ATGAA 1 cut(s) 141
XceI RCATGY 1 cut(s) 118
XmaJI CCTAGG 1 cut(s) 76
XspI CTAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.