Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000218.1

Orthogroup ID

OG0004504

Physical Location & Seq

Genomic Coordinates Forward (+)

169462 .. 175558

Gene Structure 6097 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

atggagaagaagttccttacggtggcgcctttcgagtgcgcttggcgaaatgatttgaagttccgggaagctgggaggggctgcgtggcttttgaagcgtttgctcacaatgatgtcacgctcgtgttccgggagaacgtgggaagtcagcactatcattacaagaaagataattgtcctcactatactgttattttgggtagtcataggaataggcggttgaaaattgaggtggatgggaaaactgtggtggatgtggagggtgttggtctttgctcttcctctgcatttcagagctattggatcagtatctgtgatggtttgatcagtgttggcaagggaagatacccttttcagaatcttgtctttcagtggctagattcaaatcccaattgtagtgttcgttatgttgggcttagtagttgggataaacatgttgggtataggaatgtcagtgtattacccttaactcaaaaccatatatccttgtggaagaatttggactgcaaggagtacatgcatgaggaagctggcgaagaggagttgcaggatgaacgaaccggttatgagaaatgggggcttgaaaattttcttgagagctgggagctatctgatgttgttttcgttgttggtccagaagaaaggcatgtaccagctcacaagcctattttggcagcatctgggaatttccctatatcatcagaagaccttctccagctaaaggggataacttatccccttctccatgctctacttgaatatatttacacaggtcgaacccaggtataccatcctcttatctcagatacttgtgtatgctcttacagggaaagaaatactattgagatctcaaaattggacagccttcccgtttggagtcatggccttattgcccagtcgcataaaattattctcagtttatggagtctcccatttgcaaagatgttcacaaatggaatgtgtgaaacaatttcctcagaggttcttttgagagacatatcaccagaagcgtttcaagctttgcttgagttcatgtatagtggggagctcaatttagaagctaccatggattctggtgccttgttactccaactttttctgttggctgatcaatttggagtcactcttcttcatcaggaatgctgcaaaatgcttttagaatgcctatcagaggactcggtctgtctgatgcttcaagtgatttcatcaattccctcatgtcaacttattgaagaaacttgtgagacgaacttttccatgcactttgactattgcacaactgcaagcattgacttcgttttgttagatgatgcaacctttagaaatatcattcagcatccagatttgactgtaacatctgaagagaaggttctcaatgcaatcttaatgtggggtgcgaaagcaaaggaagtgtgtggatgggaggtggtggatgagatgatgacatattcaaccgcagaagctctttttggggataggctgcagacagtaaatgaccttctaccacttgttcgatttttgctgctgcctttgtccttgcttgagaagttacagaagagcaacattagcaggcatatgtctatgtttaataatcttgtcaaggaggccatcaattgtatcgagcatggattgacaagaccggaaaacgagcacaacctgagaatccaacataggcgatctagttataaggagctccagtacatatgtgatggggacagcaatggagtcctgtactttgcaggtacatcatatggagaacatcagtgggttaatcctgttctggcgaagagaattacaattacagctagcagtcccccttctaggttcactgatcccaaggttttggtctcaagatcttaccagggaacatccttcgctgggccacaaattgaagatgggcggaataacacctggtggatggtcgacattggtgcagatcatcagctgatttgcaactactacaccttgagacatgatggctcgaggatttttaatcaaaacctgagaatccaacataggcgatctagttataaggagctccagtacatatgtgatggggacagcaatggagtcctgtactttgcaggtacatcatatggagaacatcagtgggttaatcctgttctggcgaagagaattacaattacagctagcagtcccccttctaggttcactgatcccaaggttttggtctcaagatcttaccagggaacatccttcgctgggccacagattgaagatgggcggaataacacctggtggatggtcgacattggtgcagatcatcagctgatttgcaactactacaccttgagacatgatggctccagagcatacatgagatattggaatttccagggatctctggatgggaagacgtggacaaatctgagagtacacgagaatgaccaaactatatgcaagccggggcagttcgcatcatggccagttacaggaccaaatgctctactgccgttcagattctttagggttgttctgactggacctacaatggatgcttcaaacccttggaatttctgcatttgctttttagaactctatggctacttccactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BACK BTB F5_F8_type_C Methyltransf_FA

Protein Analysis

858

Amino Acids

98.02

Weight (kDa)

5.72

Isoelectric Point (pI)

44.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_FA	PF12248	11 - 151	1.1e-30	Farnesoic acid 0-methyl transferase
BTB	PF00651	194 - 262	5.3e-07	BTB/POZ domain
BTB	PF00651	299 - 387	4.9e-15	BTB/POZ domain
BTB_KLHL33	PF21536	315 - 353	1.6e-06	Kelch-like protein 33-like, BTB/POZ domain
BACK	PF07707	395 - 470	2.4e-06	BTB And C-terminal Kelch
F5_F8_type_C	PF00754	715 - 804	5e-07	F5/8 type C domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600
fragaria_vesca	FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320
malus_domestica	MD08G1002100.v1.1
prunus_persica	Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1
pyrus_communis	pycom08g00140
rosa_chinensis	RchiOBHm_Chr6g0304381
rosa_laevigata	RLG00000010985
rosa_multiflora	Rmu_ssc0000218.1_g000043
rosa_roxburghii	Rroxscaffold_7G00163790
rosa_rugosa	Rorug06G0330900 Rorug06G0331000
rosa_samantha	Rh6AG443900 Rh6BG458500 Rh6CG456700 Rh6DG443400
rosa_wichuraiana	Rw6G038530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1686, 2031
Acc36I	ACCTGC	2 cut(s)	1730, 2075
AccB1I	GGYRCC	2 cut(s)	25, 1076
AccI	GTMKAC	3 cut(s)	786, 1923, 2268
AciI	CCGC	4 cut(s)	217, 1455, 1900, 2245
AclWI	GGATC	4 cut(s)	311, 1826, 2171, 2368
AcoI	YGGCCR	1 cut(s)	2444
AcsI	RAATTY	5 cut(s)	496, 586, 685, 2350, 2533
AcuI	CTGAAG	1 cut(s)	1380
AcyI	GRCGYC	1 cut(s)	26
AdeI	CACNNNGTG	2 cut(s)	1914, 2259
AfaI	GTAC	9 cut(s)	515, 651, 1700, 1733, 1744, 2045, 2078, 2089, 2397
AfiI	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
AflIII	ACRYGT	1 cut(s)	433
AgeI	ACCGGT	1 cut(s)	560
AjiI	CACGTC	1 cut(s)	2379
AjnI	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
AjuI	GAANNNNNNNTTGG	2 cut(s)	1452, 1484
AleI	CACNNNNGTG	1 cut(s)	122
AloI	GAACNNNNNNTCC	1 cut(s)	28
Alw21I	GWGCWC	4 cut(s)	1050, 1653, 1695, 2040
Alw26I	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
AlwI	GGATC	4 cut(s)	311, 1826, 2171, 2368
AlwNI	CAGNNNCTG	2 cut(s)	312, 680
Ama87I	CYCGRG	1 cut(s)	1981
AoxI	GGCC	5 cut(s)	883, 1605, 1880, 2225, 2444
ApeKI	GCWGC	6 cut(s)	81, 674, 1143, 1480, 1522, 1525
ApoI	RAATTY	5 cut(s)	496, 586, 685, 2350, 2533
AsiGI	ACCGGT	1 cut(s)	560
Asp700I	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
AspLEI	GCGC	2 cut(s)	28, 41
AspS9I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
AsuC2I	CCSGG	3 cut(s)	65, 131, 2427
AsuHPI	GGTGA	1 cut(s)	993
AsuNHI	GCTAGC	2 cut(s)	1805, 2150
AvaI	CYCGRG	1 cut(s)	1981
AvaII	GGWCC	3 cut(s)	632, 2456, 2504
BaeI	ACNNNNGTAYC	2 cut(s)	798, 831
BalI	TGGCCA	1 cut(s)	2446
BanI	GGYRCC	2 cut(s)	25, 1076
BanII	GRGCYC	3 cut(s)	1050, 1695, 2040
BarI	GAAGNNNNNNTAC	2 cut(s)	1482, 1514
BauI	CACGAG	2 cut(s)	122, 2399
BbsI	GAAGAC	2 cut(s)	711, 2381
Bbv12I	GWGCWC	4 cut(s)	1050, 1653, 1695, 2040
BbvI	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
BceAI	ACGGC	1 cut(s)	2458
BcgI	CGANNNNNNTGC	6 cut(s)	1276, 1310, 1913, 1947, 2258, 2292
BciT130I	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
BclI	TGATCA	2 cut(s)	324, 1108
BcnI	CCSGG	3 cut(s)	65, 131, 2427
BcoDI	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
BfaI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
BfmI	CTRYAG	1 cut(s)	1481
BfoI	RGCGCY	1 cut(s)	29
BfuAI	ACCTGC	2 cut(s)	1730, 2075
BglII	AGATCT	3 cut(s)	846, 1853, 2198
BisI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
BlsI	GCNGC	6 cut(s)	83, 676, 1145, 1482, 1524, 1527
Bme1390I	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
Bme18I	GGWCC	3 cut(s)	632, 2456, 2504
BmeT110I	CYCGRG	1 cut(s)	1981
BmgBI	CACGTC	1 cut(s)	2379
BmgT120I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
BmiI	GGNNCC	3 cut(s)	27, 1078, 2326
BmrFI	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
BmrI	ACTGGG	1 cut(s)	889
BmsI	GCATC	6 cut(s)	686, 1179, 1300, 1345, 2447, 2506
BmtI	GCTAGC	2 cut(s)	1809, 2154
BmuI	ACTGGG	1 cut(s)	889
BpiI	GAAGAC	2 cut(s)	711, 2381
BpmI	CTGGAG	4 cut(s)	698, 1679, 2024, 2311
BpuEI	CTTGAG	7 cut(s)	614, 1046, 1562, 1834, 1987, 2179, 2332
BpuMI	CCSGG	3 cut(s)	65, 131, 2427
BsaBI	GATNNNNATC	2 cut(s)	308, 384
BsaHI	GRCGYC	1 cut(s)	26
BsaI	GGTCTC	2 cut(s)	1852, 2197
BsaJI	CCNNGG	9 cut(s)	780, 1065, 1836, 1861, 2181, 2206, 2356, 2426, 2528
BsaWI	WCCGGW	2 cut(s)	560, 1639
BsaXI	ACNNNNNCTCC	5 cut(s)	26, 1682, 1712, 2027, 2057
Bsc4I	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	5 cut(s)	895, 1696, 2041, 2447, 2506
Bse3DI	GCAATG	2 cut(s)	1726, 2071
Bse8I	GATNNNNATC	2 cut(s)	308, 384
BseBI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
BseDI	CCNNGG	9 cut(s)	780, 1065, 1836, 1861, 2181, 2206, 2356, 2426, 2528
BseJI	GATNNNNATC	2 cut(s)	308, 384
BseLI	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
BseMI	GCAATG	2 cut(s)	1726, 2071
BseMII	CTCAG	6 cut(s)	816, 928, 990, 1649, 1994, 2381
BseNI	ACTGG	5 cut(s)	895, 1696, 2041, 2447, 2506
BseRI	GAGGAG	1 cut(s)	554
BseXI	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
BseYI	CCCAGC	4 cut(s)	71, 600, 1877, 2222
BsgI	GTGCAG	2 cut(s)	1953, 2298
BshFI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
BshNI	GGYRCC	2 cut(s)	25, 1076
BshTI	ACCGGT	1 cut(s)	560
BsiHKAI	GWGCWC	4 cut(s)	1050, 1653, 1695, 2040
BsiHKCI	CYCGRG	1 cut(s)	1981
BsiSI	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
BslFI	GGGAC	4 cut(s)	1727, 1797, 2072, 2142
BslI	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
BsmAI	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
BsmBI	CGTCTC	1 cut(s)	1238
BsmFI	GGGAC	4 cut(s)	1727, 1797, 2072, 2142
BsmI	GAATGC	2 cut(s)	1145, 1166
BsnI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
Bso31I	GGTCTC	2 cut(s)	1852, 2197
BsoBI	CYCGRG	1 cut(s)	1981
Bsp1286I	GDGCHC	4 cut(s)	1050, 1653, 1695, 2040
Bsp19I	CCATGG	1 cut(s)	1065
BspACI	CCGC	4 cut(s)	217, 1455, 1900, 2245
BspANI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
BspCNI	CTCAG	6 cut(s)	815, 927, 989, 1650, 1995, 2382
BspLI	GGNNCC	3 cut(s)	27, 1078, 2326
BspMAI	CTGCAG	1 cut(s)	1485
BspMI	ACCTGC	2 cut(s)	1730, 2075
BspOI	GCTAGC	2 cut(s)	1809, 2154
BspPI	GGATC	4 cut(s)	311, 1826, 2171, 2368
BspQI	GCTCTTC	2 cut(s)	283, 1550
BspT107I	GGYRCC	2 cut(s)	25, 1076
BspTNI	GGTCTC	2 cut(s)	1852, 2197
BsrDI	GCAATG	2 cut(s)	1726, 2071
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	5 cut(s)	895, 1696, 2041, 2447, 2506
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	9 cut(s)	780, 1065, 1836, 1861, 2181, 2206, 2356, 2426, 2528
BssNAI	GTATAC	1 cut(s)	787
BssNI	GRCGYC	1 cut(s)	26
BssSI	CACGAG	2 cut(s)	122, 2399
BssT1I	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
Bst1107I	GTATAC	1 cut(s)	787
Bst2BI	CACGAG	2 cut(s)	122, 2399
Bst2UI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
Bst4CI	ACNGT	5 cut(s)	22, 190, 247, 1351, 1489
Bst6I	CTCTTC	7 cut(s)	283, 531, 1131, 1356, 1550, 1781, 2126
BstACI	GRCGYC	1 cut(s)	26
BstC8I	GCNNGC	6 cut(s)	532, 1285, 1571, 1807, 2152, 2423
BstDEI	CTNAG	7 cut(s)	416, 802, 914, 976, 1658, 2003, 2390
BstDSI	CCRYGG	1 cut(s)	1065
BstENI	CCTNNNNNAGG	1 cut(s)	1169
BstH2I	RGCGCY	1 cut(s)	29
BstHHI	GCGC	2 cut(s)	28, 41
BstMAI	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
BstMWI	GCNNNNNNNGC	3 cut(s)	95, 1016, 1566
BstNI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
BstNSI	RCATGY	3 cut(s)	437, 520, 650
BstSCI	CCNGG	9 cut(s)	63, 129, 780, 1860, 1910, 2205, 2255, 2355, 2425
BstSFI	CTRYAG	1 cut(s)	1481
BstV1I	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
BstV2I	GAAGAC	2 cut(s)	711, 2381
BstX2I	RGATCY	4 cut(s)	846, 1853, 2198, 2360
BstXI	CCANNNNNNTGG	2 cut(s)	1843, 2188
BstYI	RGATCY	4 cut(s)	846, 1853, 2198, 2360
BstZ17I	GTATAC	1 cut(s)	787
BsuRI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
BtgI	CCRYGG	1 cut(s)	1065
BtrI	CACGTC	1 cut(s)	2379
BtsIMutI	CAGTG	7 cut(s)	334, 377, 460, 1769, 1827, 2114, 2172
BveI	ACCTGC	2 cut(s)	1730, 2075
Cac8I	GCNNGC	6 cut(s)	532, 1285, 1571, 1807, 2152, 2423
CaiI	CAGNNNCTG	2 cut(s)	312, 680
CfoI	GCGC	2 cut(s)	28, 41
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
CsiI	ACCWGGT	2 cut(s)	1910, 2255
Csp6I	GTAC	9 cut(s)	514, 650, 1699, 1732, 1743, 2044, 2077, 2088, 2396
CspAI	ACCGGT	1 cut(s)	560
CviQI	GTAC	9 cut(s)	514, 650, 1699, 1732, 1743, 2044, 2077, 2088, 2396
DdeI	CTNAG	7 cut(s)	416, 802, 914, 976, 1658, 2003, 2390
DinI	GGCGCC	1 cut(s)	27
DraIII	CACNNNGTG	2 cut(s)	1914, 2259
EaeI	YGGCCR	1 cut(s)	2444
Eam1104I	CTCTTC	7 cut(s)	283, 531, 1131, 1356, 1550, 1781, 2126
EarI	CTCTTC	7 cut(s)	283, 531, 1131, 1356, 1550, 1781, 2126
EciI	GGCGGA	2 cut(s)	1915, 2260
Ecl136II	GAGCTC	3 cut(s)	1048, 1693, 2038
Eco130I	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
Eco24I	GRGCYC	3 cut(s)	1050, 1695, 2040
Eco31I	GGTCTC	2 cut(s)	1852, 2197
Eco47I	GGWCC	3 cut(s)	632, 2456, 2504
Eco53kI	GAGCTC	3 cut(s)	1048, 1693, 2038
Eco57I	CTGAAG	1 cut(s)	1380
Eco88I	CYCGRG	1 cut(s)	1981
EcoICRI	GAGCTC	3 cut(s)	1048, 1693, 2038
EcoNI	CCTNNNNNAGG	1 cut(s)	1169
EcoRII	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
EcoT14I	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
EcoT22I	ATGCAT	1 cut(s)	522
EcoT38I	GRGCYC	3 cut(s)	1050, 1695, 2040
EgeI	GGCGCC	1 cut(s)	27
EheI	GGCGCC	1 cut(s)	27
ErhI	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
Esp3I	CGTCTC	1 cut(s)	1238
FalI	AAGNNNNNCTT	4 cut(s)	334, 366, 1008, 1040
FaqI	GGGAC	4 cut(s)	1727, 1797, 2072, 2142
FauNDI	CATATG	5 cut(s)	1575, 1703, 1750, 2048, 2095
FbaI	TGATCA	2 cut(s)	324, 1108
FblI	GTMKAC	3 cut(s)	786, 1923, 2268
Fnu4HI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
FriOI	GRGCYC	3 cut(s)	1050, 1695, 2040
Fsp4HI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
FspBI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
GlaI	GCGC	2 cut(s)	27, 40
GluI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
GsaI	CCCAGC	4 cut(s)	75, 604, 1881, 2226
GsuI	CTGGAG	4 cut(s)	698, 1679, 2024, 2311
HaeII	RGCGCY	1 cut(s)	29
HaeIII	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
HapII	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
HhaI	GCGC	2 cut(s)	28, 41
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	2 cut(s)	26, 39
HinP1I	GCGC	2 cut(s)	26, 39
HincII	GTYRAC	3 cut(s)	1223, 1924, 2269
HindII	GTYRAC	3 cut(s)	1223, 1924, 2269
HindIII	AAGCTT	1 cut(s)	1017
HpaII	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
HphI	GGTGA	1 cut(s)	993
Hpy166II	GTNNAC	9 cut(s)	787, 948, 1223, 1827, 1924, 2172, 2269, 2382, 2398
Hpy188III	TCNNGA	8 cut(s)	593, 635, 1136, 1340, 1851, 2196, 2328, 2366
Hpy8I	GTNNAC	9 cut(s)	787, 948, 1223, 1827, 1924, 2172, 2269, 2382, 2398
HpyAV	CCTTC	9 cut(s)	719, 749, 875, 1360, 1508, 1827, 1882, 2172, 2227
HpyCH4III	ACNGT	5 cut(s)	22, 190, 247, 1351, 1489
HpyCH4IV	ACGT	2 cut(s)	138, 2378
HpyF10VI	GCNNNNNNNGC	3 cut(s)	95, 1016, 1566
HpyF3I	CTNAG	7 cut(s)	416, 802, 914, 976, 1658, 2003, 2390
HpySE526I	ACGT	2 cut(s)	138, 2378
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	2 cut(s)	26, 39
KasI	GGCGCC	1 cut(s)	25
Ksp22I	TGATCA	2 cut(s)	324, 1108
LguI	GCTCTTC	2 cut(s)	283, 1550
LmnI	GCTCC	7 cut(s)	604, 1045, 1690, 1698, 2035, 2043, 2330
Lsp1109I	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
LweI	GCATC	6 cut(s)	686, 1179, 1300, 1345, 2447, 2506
MabI	ACCWGGT	2 cut(s)	1910, 2255
MaeI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
MaeII	ACGT	2 cut(s)	138, 2378
MaeIII	GTNAC	6 cut(s)	115, 1083, 1120, 1351, 1548, 2449
MfeI	CAATTG	2 cut(s)	391, 1612
MflI	RGATCY	4 cut(s)	846, 1853, 2198, 2360
MhlI	GDGCHC	4 cut(s)	1050, 1653, 1695, 2040
MlsI	TGGCCA	1 cut(s)	2446
MluNI	TGGCCA	1 cut(s)	2446
Mly113I	GGCGCC	1 cut(s)	26
MlyI	GAGTC	6 cut(s)	886, 934, 1128, 1169, 1734, 2079
MmeI	TCCRAC	3 cut(s)	1114, 1690, 2035
Mox20I	TGGCCA	1 cut(s)	2446
Mph1103I	ATGCAT	1 cut(s)	522
MroXI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
MscI	TGGCCA	1 cut(s)	2446
MseI	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
MslI	CAYNNNNRTG	3 cut(s)	111, 122, 2403
Msp20I	TGGCCA	1 cut(s)	2446
MspA1I	CMGCKG	2 cut(s)	1945, 2290
MspI	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
MspR9I	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
MunI	CAATTG	2 cut(s)	391, 1612
Mva1269I	GAATGC	2 cut(s)	1145, 1166
MvaI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
MwoI	GCNNNNNNNGC	3 cut(s)	95, 1016, 1566
NarI	GGCGCC	1 cut(s)	26
NciI	CCSGG	3 cut(s)	65, 131, 2427
NcoI	CCATGG	1 cut(s)	1065
NdeI	CATATG	5 cut(s)	1575, 1703, 1750, 2048, 2095
NheI	GCTAGC	2 cut(s)	1805, 2150
NlaIV	GGNNCC	3 cut(s)	27, 1078, 2326
NmuCI	GTSAC	2 cut(s)	115, 1120
NsiI	ATGCAT	1 cut(s)	522
NspI	RCATGY	3 cut(s)	437, 520, 650
OliI	CACNNNNGTG	1 cut(s)	122
PaeR7I	CTCGAG	1 cut(s)	1981
PciI	ACATGT	1 cut(s)	433
PciSI	GCTCTTC	2 cut(s)	283, 1550
PctI	GAATGC	2 cut(s)	1145, 1166
PdmI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
PfeI	GAWTC	6 cut(s)	358, 380, 1070, 1662, 2007, 2481
PflFI	GACNNNGTC	1 cut(s)	1178
PfoI	TCCNGGA	2 cut(s)	63, 129
PinAI	ACCGGT	1 cut(s)	560
PkrI	GCNGC	6 cut(s)	83, 676, 1145, 1482, 1524, 1527
PleI	GAGTC	6 cut(s)	885, 933, 1127, 1169, 1733, 2078
PluTI	GGCGCC	1 cut(s)	29
PpsI	GAGTC	6 cut(s)	885, 933, 1127, 1169, 1733, 2078
PscI	ACATGT	1 cut(s)	433
PsiI	TTATAA	2 cut(s)	1686, 2031
Psp124BI	GAGCTC	3 cut(s)	1050, 1695, 2040
Psp6I	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
PspFI	CCCAGC	4 cut(s)	71, 600, 1877, 2222
PspGI	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
PspN4I	GGNNCC	3 cut(s)	27, 1078, 2326
PspPI	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
PspXI	VCTCGAGB	1 cut(s)	1981
PstI	CTGCAG	1 cut(s)	1485
PstNI	CAGNNNCTG	2 cut(s)	312, 680
PsuI	RGATCY	4 cut(s)	846, 1853, 2198, 2360
PsyI	GACNNNGTC	1 cut(s)	1178
PvuII	CAGCTG	2 cut(s)	1945, 2290
RsaI	GTAC	9 cut(s)	515, 651, 1700, 1733, 1744, 2045, 2078, 2089, 2397
RsaNI	GTAC	9 cut(s)	514, 650, 1699, 1732, 1743, 2044, 2077, 2088, 2396
RseI	CAYNNNNRTG	3 cut(s)	111, 122, 2403
SacI	GAGCTC	3 cut(s)	1050, 1695, 2040
SalI	GTCGAC	2 cut(s)	1922, 2267
SapI	GCTCTTC	2 cut(s)	283, 1550
SaqAI	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
SatI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
Sau96I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
SchI	GAGTC	6 cut(s)	886, 934, 1128, 1169, 1734, 2079
ScrFI	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
SduI	GDGCHC	4 cut(s)	1050, 1653, 1695, 2040
SexAI	ACCWGGT	2 cut(s)	1910, 2255
SfaNI	GCATC	6 cut(s)	686, 1179, 1300, 1345, 2447, 2506
SfcI	CTRYAG	1 cut(s)	1481
SfoI	GGCGCC	1 cut(s)	27
Sfr274I	CTCGAG	1 cut(s)	1981
SinI	GGWCC	3 cut(s)	632, 2456, 2504
SlaI	CTCGAG	1 cut(s)	1981
SmiMI	CAYNNNNRTG	3 cut(s)	111, 122, 2403
SmlI	CTYRAG	8 cut(s)	593, 1025, 1541, 1849, 1966, 1981, 2194, 2311
SmoI	CTYRAG	8 cut(s)	593, 1025, 1541, 1849, 1966, 1981, 2194, 2311
SsiI	CCGC	4 cut(s)	217, 1455, 1900, 2245
SspDI	GGCGCC	1 cut(s)	25
SspMI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
SstI	GAGCTC	3 cut(s)	1050, 1695, 2040
StyD4I	CCNGG	9 cut(s)	63, 129, 780, 1860, 1910, 2205, 2255, 2355, 2425
StyI	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
TaaI	ACNGT	5 cut(s)	22, 190, 247, 1351, 1489
TaiI	ACGT	2 cut(s)	141, 2381
TaqI	TCGA	7 cut(s)	33, 775, 1513, 1620, 1923, 1982, 2268
TaqII	GACCGA	1 cut(s)	1168
TatI	WGTACW	6 cut(s)	513, 1698, 1731, 2043, 2076, 2395
TfiI	GAWTC	6 cut(s)	358, 380, 1070, 1662, 2007, 2481
Tru1I	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
Tru9I	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
TscAI	CASTG	7 cut(s)	334, 377, 460, 1769, 1834, 2114, 2179
TseFI	GTSAC	2 cut(s)	115, 1120
TseI	GCWGC	6 cut(s)	81, 674, 1143, 1480, 1522, 1525
Tsp45I	GTSAC	2 cut(s)	115, 1120
TspDTI	ATGAA	4 cut(s)	567, 1021, 1121, 1194
TspRI	CASTG	7 cut(s)	334, 377, 460, 1769, 1834, 2114, 2179
Tth111I	GACNNNGTC	1 cut(s)	1178
VpaK11BI	GGWCC	3 cut(s)	632, 2456, 2504
XagI	CCTNNNNNAGG	1 cut(s)	1169
XapI	RAATTY	5 cut(s)	496, 586, 685, 2350, 2533
XceI	RCATGY	3 cut(s)	437, 520, 650
XhoI	CTCGAG	1 cut(s)	1981
XmiI	GTMKAC	3 cut(s)	786, 1923, 2268
XmnI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
XspI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
Zsp2I	ATGCAT	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.