Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000412.1

Orthogroup ID

OG0006494

Physical Location & Seq

Genomic Coordinates Reverse (-)

48959 .. 53010

Gene Structure 4052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000412.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

atggctaaattcactgcagaagaagtaaattctctccaggcagggggaaatgaggtgagcatgaatactgtcggtaatattggtagactcagggattttatcaaacatgtgtatgttgaaagaaaatacactggtgagaagggtgtccagaagctcccaaagctgcgattgagtgaggagcctgatgaaagcaggagggttggtgcatatcacggtggatccagaggcttccatgatgaggagaagaaatttggtgcatatcatggtggatttaggagcttcagtgatgccccttatgttggacgtaggagttttcctgatgaggacaggaaagttgctgcaccttatggtggatctaggagttttcgtgaagaggactggaaggttgctgtaccttctggtggatctaggagttttcgtgacgaggactggaaggttgctgccccttatggtggatctaggagttttcatgatcatgagaaaaggttcgaaaggcattatagtcaaggatctagtcctaatgtaagaggtgctgaccaaaatgtagtaaaatattactatgatgaacgaagaagtccacgatcttacgaagaaaattcaagaatcggcggtaccgggttcaggagaaatcctgtccgttttgaggttgttgataacaggattcgggatgatagaaaagcacgcagtgggctcacacctcccaagtcccaaaacaggtcacctgaaaataagaacatggatagcttctcttcccctgctgttcgctctgttcaagagaaacaaagggagaatatgcttcctccaatgtttcgtgaaactactataacaaatgatcagaagcatgctgatggttctgctcataatcagaaaatgaaatcttcaagtccccatgatgggaatgcagtggaacatataaaagaaaagttggaaagcttgattgatttcaatactgatcctgagcgatcagatgatgtagtaaagtcacaacaacagcaaactcctccacccgataatggtaacaactgggcctcatttgactcatctacaaaggagaaggcacctccggtcccaaagccagacactttggaggctttgctacttgaattaactcccgcatccgtacctgatactgcatctgaggctccaagaaatgatgacgctccttcaactgcttgtccaaacaacatgcctgcaggtggtgctgcgcctgatgcccctgcaggtggtgctgcccctggtgcgcctgcagagcagatgctatttgataccgttagtgcttgtacatctgcatcaactagtaccagtgtgccagtacagccttctgatgcagatcctttgcaagctgtacctactagtgttggtgacgcctcggtaacagttactgatgcgctgcagtcaccaagtaggcagcaagatcagtcgtctataagctttgctgcagatagcggctctccttcacaacatgccattattcctgttgaagcttcaaataatttgtacatgaaggctctagttgcccttctcttatctagatgcatggtttttcaccctattgcttcatgcacacatctgcagtcaaggacatcatcactcgcaccaaacacacaaggatctctctgtgtttctgctgaagaaccatctcaatctatgttgcgaacccaatctcttccggtggaaacaaaatctagtaagagagaagagcttccagtggacctctttgctgcacattactcatcaataccttcacaagattcagtttggcaccctggtccacctcatggaatgggattcaacatgcagtattatcctaacatagcgcctgctcctgcatttccgggttcagggaaatcggcaaacccgtttgatattaatgatgacaaaactttaggacattccacacattttccatccatgtcatcgttagaagacgctctacataatgtgtcagtacctccaagcttgatgcatacttccagccttgattctttttcttcgcatttgaagccgcctcaattaccaaatcatgaatctgtgatgccttcacaatcactgccttcctattcagctttctctcctagtccatacatgggacagcaattacataacaatgcacaatttttgagactgcaaggaatcggtggatttagcagggatgaagctgctgcatttggcaccttgagctcaagtcagcaatcatttcagcaaccaagcatcagatgcccaccacccagcaactcagaaaccttttcttcgatgggaggtaacccatttggatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArfGap

Protein Analysis

758

Amino Acids

82.43

Weight (kDa)

6.07

Isoelectric Point (pI)

75.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32630 AT4G32630 AT4G32630 AT4G32630 AT4G32630 AT4G32630
fragaria_vesca	FvH4_2g30220 FvH4_2g30220
malus_domestica	MD08G1135500.v1.1 MD15G1114500.v1.1
prunus_persica	Prupe.1G466000_v2.0.a1 Prupe.1G466000_v2.0.a1 Prupe.1G466000_v2.0.a1
pyrus_communis	pycom08g11450
rosa_chinensis	RchiOBHm_Chr6g0312661
rosa_laevigata	RLG00000010306
rosa_multiflora	Rmu_sc0002859.1_g000002 Rmu_ssc0000412.1_g000008
rosa_roxburghii	Rroxscaffold_7G00156590
rosa_rugosa	Rorug06G0398200
rosa_samantha	Rh4DG050300 Rh6AG515500 Rh6BG526800 Rh6CG531700 Rh6DG517800
rosa_wichuraiana	Rw6G044790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1184, 1211
Acc36I	ACCTGC	2 cut(s)	1184, 1211
Acc65I	GGTACC	1 cut(s)	611
AccB1I	GGYRCC	4 cut(s)	611, 1057, 1761, 2171
AccB7I	CCANNNNNTGG	1 cut(s)	1778
AccI	GTMKAC	1 cut(s)	85
AciI	CCGC	4 cut(s)	609, 1113, 1446, 2006
AclWI	GGATC	9 cut(s)	213, 226, 361, 412, 463, 517, 947, 1325, 1618
AcsI	RAATTY	4 cut(s)	8, 28, 248, 595
AcuI	CTGAAG	2 cut(s)	265, 1650
AcyI	GRCGYC	1 cut(s)	1365
AdeI	CACNNNGTG	1 cut(s)	686
AfaI	GTAC	9 cut(s)	393, 613, 1122, 1282, 1300, 1314, 1347, 1499, 1950
AflIII	ACRYGT	1 cut(s)	106
AhlI	ACTAGT	2 cut(s)	1295, 1352
AjnI	CCWGG	3 cut(s)	36, 1234, 1765
Alw21I	GWGCWC	1 cut(s)	2183
Alw26I	GTCTC	1 cut(s)	2116
AlwI	GGATC	9 cut(s)	213, 226, 361, 412, 463, 517, 947, 1325, 1618
AlwNI	CAGNNNCTG	1 cut(s)	1382
AoxI	GGCC	1 cut(s)	1026
ApoI	RAATTY	4 cut(s)	8, 28, 248, 595
AseI	ATTAAT	1 cut(s)	1869
Asp700I	GAANNNNTTC	2 cut(s)	485, 1701
Asp718I	GGTACC	1 cut(s)	611
AspLEI	GCGC	4 cut(s)	1207, 1243, 1390, 1819
AspS9I	GGNCC	4 cut(s)	1026, 1066, 1711, 1769
AsuC2I	CCSGG	2 cut(s)	616, 1836
AsuHPI	GGTGA	6 cut(s)	67, 146, 711, 1373, 1389, 1538
AsuII	TTCGAA	1 cut(s)	489
AvaII	GGWCC	3 cut(s)	1066, 1711, 1769
BamHI	GGATCC	1 cut(s)	218
BanI	GGYRCC	4 cut(s)	611, 1057, 1761, 2171
BanII	GRGCYC	2 cut(s)	693, 2183
BarI	GAAGNNNNNNTAC	2 cut(s)	1917, 1949
BbsI	GAAGAC	1 cut(s)	1932
Bbv12I	GWGCWC	1 cut(s)	2183
BccI	CCATC	5 cut(s)	842, 887, 1645, 1915, 2248
BciT130I	CCWGG	3 cut(s)	38, 1236, 1767
BclI	TGATCA	2 cut(s)	472, 832
BcnI	CCSGG	2 cut(s)	616, 1836
BcoDI	GTCTC	1 cut(s)	2116
BcuI	ACTAGT	2 cut(s)	1295, 1352
BfmI	CTRYAG	7 cut(s)	15, 1191, 1218, 1245, 1391, 1437, 1571
BfoI	RGCGCY	1 cut(s)	1820
BfuAI	ACCTGC	2 cut(s)	1184, 1211
Bme1390I	CCNGG	5 cut(s)	38, 616, 1236, 1767, 1836
Bme18I	GGWCC	3 cut(s)	1066, 1711, 1769
BmgT120I	GGNCC	4 cut(s)	1026, 1066, 1711, 1769
BmiI	GGNNCC	8 cut(s)	180, 220, 613, 1059, 1068, 1143, 1763, 2173
BmrFI	CCNGG	5 cut(s)	38, 616, 1236, 1767, 1836
BmrI	ACTGGG	1 cut(s)	1033
BmuI	ACTGGG	1 cut(s)	1033
BpiI	GAAGAC	1 cut(s)	1932
BpmI	CTGGAG	1 cut(s)	20
Bpu10I	CCTNAGC	1 cut(s)	957
Bpu14I	TTCGAA	1 cut(s)	489
BpuEI	CTTGAG	2 cut(s)	2167, 2197
BpuMI	CCSGG	2 cut(s)	616, 1836
BsaBI	GATNNNNATC	1 cut(s)	1329
BsaHI	GRCGYC	1 cut(s)	1365
BsaJI	CCNNGG	3 cut(s)	1234, 1368, 1765
BsaWI	WCCGGW	2 cut(s)	1063, 1669
BsaXI	ACNNNNNCTCC	8 cut(s)	187, 217, 268, 298, 352, 382, 403, 433
Bse1I	ACTGG	7 cut(s)	136, 383, 434, 1028, 1302, 1310, 1706
Bse8I	GATNNNNATC	1 cut(s)	1329
BseBI	CCWGG	3 cut(s)	38, 1236, 1767
BseDI	CCNNGG	3 cut(s)	1234, 1368, 1765
BseGI	GGATG	4 cut(s)	673, 1115, 1907, 2158
BseJI	GATNNNNATC	1 cut(s)	1329
BseMII	CTCAG	4 cut(s)	103, 948, 1128, 2250
BseNI	ACTGG	7 cut(s)	136, 383, 434, 1028, 1302, 1310, 1706
BseRI	GAGGAG	3 cut(s)	191, 254, 990
BseYI	CCCAGC	1 cut(s)	2228
BsgI	GTGCAG	2 cut(s)	324, 1707
BshFI	GGCC	1 cut(s)	1028
BshNI	GGYRCC	4 cut(s)	611, 1057, 1761, 2171
BsiHKAI	GWGCWC	1 cut(s)	2183
BsiSI	CCGG	4 cut(s)	615, 1064, 1670, 1835
BslFI	GGGAC	4 cut(s)	691, 870, 1052, 2103
BsmAI	GTCTC	1 cut(s)	2116
BsmFI	GGGAC	4 cut(s)	691, 870, 1052, 2103
BsmI	GAATGC	1 cut(s)	904
BsnI	GGCC	1 cut(s)	1028
Bsp119I	TTCGAA	1 cut(s)	489
Bsp1286I	GDGCHC	2 cut(s)	693, 2183
Bsp1407I	TGTACA	2 cut(s)	1280, 1497
BspACI	CCGC	4 cut(s)	609, 1113, 1446, 2006
BspANI	GGCC	1 cut(s)	1028
BspCNI	CTCAG	4 cut(s)	102, 949, 1129, 2249
BspHI	TCATGA	3 cut(s)	469, 475, 2023
BspLI	GGNNCC	8 cut(s)	180, 220, 613, 1059, 1068, 1143, 1763, 2173
BspMAI	CTGCAG	7 cut(s)	19, 1195, 1222, 1249, 1395, 1441, 1575
BspMI	ACCTGC	2 cut(s)	1184, 1211
BspPI	GGATC	9 cut(s)	213, 226, 361, 412, 463, 517, 947, 1325, 1618
BspQI	GCTCTTC	1 cut(s)	1692
BspT104I	TTCGAA	1 cut(s)	489
BspT107I	GGYRCC	4 cut(s)	611, 1057, 1761, 2171
BsrGI	TGTACA	2 cut(s)	1280, 1497
BsrI	ACTGG	7 cut(s)	136, 383, 434, 1028, 1302, 1310, 1706
BssECI	CCNNGG	3 cut(s)	1234, 1368, 1765
BssNI	GRCGYC	1 cut(s)	1365
Bst2UI	CCWGG	3 cut(s)	38, 1236, 1767
Bst4CI	ACNGT	4 cut(s)	70, 215, 1270, 1378
Bst6I	CTCTTC	4 cut(s)	366, 754, 1671, 1692
BstACI	GRCGYC	1 cut(s)	1365
BstAPI	GCANNNNNTGC	3 cut(s)	1199, 1226, 2217
BstAUI	TGTACA	2 cut(s)	1280, 1497
BstBI	TTCGAA	1 cut(s)	489
BstC8I	GCNNGC	6 cut(s)	682, 843, 1191, 1245, 1341, 1821
BstDEI	CTNAG	4 cut(s)	89, 957, 1137, 2236
BstEII	GGTNACC	2 cut(s)	717, 2261
BstF5I	GGATG	4 cut(s)	673, 1115, 1907, 2158
BstH2I	RGCGCY	1 cut(s)	1820
BstHHI	GCGC	4 cut(s)	1207, 1243, 1390, 1819
BstMAI	GTCTC	1 cut(s)	2116
BstNI	CCWGG	3 cut(s)	38, 1236, 1767
BstNSI	RCATGY	5 cut(s)	110, 845, 1189, 1466, 1798
BstPI	GGTNACC	2 cut(s)	717, 2261
BstSCI	CCNGG	5 cut(s)	36, 614, 1234, 1765, 1834
BstSFI	CTRYAG	7 cut(s)	15, 1191, 1218, 1245, 1391, 1437, 1571
BstV2I	GAAGAC	1 cut(s)	1932
BstX2I	RGATCY	7 cut(s)	218, 353, 404, 455, 509, 1330, 1610
BstYI	RGATCY	7 cut(s)	218, 353, 404, 455, 509, 1330, 1610
BsuRI	GGCC	1 cut(s)	1028
BtsCI	GGATG	4 cut(s)	673, 1115, 1907, 2158
BtsI	GCAGTG	4 cut(s)	12, 691, 909, 2048
BtsIMutI	CAGTG	8 cut(s)	12, 129, 289, 691, 909, 1309, 1713, 2048
BveI	ACCTGC	2 cut(s)	1184, 1211
Cac8I	GCNNGC	6 cut(s)	682, 843, 1191, 1245, 1341, 1821
CaiI	CAGNNNCTG	1 cut(s)	1382
CciI	TCATGA	3 cut(s)	469, 475, 2023
CfoI	GCGC	4 cut(s)	1207, 1243, 1390, 1819
Cfr13I	GGNCC	4 cut(s)	1026, 1066, 1711, 1769
CseI	GACGC	3 cut(s)	1166, 1373, 1937
Csp6I	GTAC	9 cut(s)	392, 612, 1121, 1281, 1299, 1313, 1346, 1498, 1949
CviQI	GTAC	9 cut(s)	392, 612, 1121, 1281, 1299, 1313, 1346, 1498, 1949
DdeI	CTNAG	4 cut(s)	89, 957, 1137, 2236
DraIII	CACNNNGTG	1 cut(s)	686
Eam1104I	CTCTTC	4 cut(s)	366, 754, 1671, 1692
EarI	CTCTTC	4 cut(s)	366, 754, 1671, 1692
Ecl136II	GAGCTC	1 cut(s)	2181
Eco24I	GRGCYC	2 cut(s)	693, 2183
Eco47I	GGWCC	3 cut(s)	1066, 1711, 1769
Eco53kI	GAGCTC	1 cut(s)	2181
Eco57I	CTGAAG	2 cut(s)	265, 1650
Eco91I	GGTNACC	2 cut(s)	717, 2261
EcoICRI	GAGCTC	1 cut(s)	2181
EcoO65I	GGTNACC	2 cut(s)	717, 2261
EcoRII	CCWGG	3 cut(s)	36, 1234, 1765
EcoT22I	ATGCAT	2 cut(s)	1538, 1968
EcoT38I	GRGCYC	2 cut(s)	693, 2183
FaqI	GGGAC	4 cut(s)	691, 870, 1052, 2103
FauI	CCCGC	1 cut(s)	1120
FbaI	TGATCA	2 cut(s)	472, 832
FblI	GTMKAC	1 cut(s)	85
FokI	GGATG	4 cut(s)	680, 1102, 1894, 2165
FriOI	GRGCYC	2 cut(s)	693, 2183
GlaI	GCGC	4 cut(s)	1206, 1242, 1389, 1818
GsaI	CCCAGC	1 cut(s)	2232
GsuI	CTGGAG	1 cut(s)	20
HaeII	RGCGCY	1 cut(s)	1820
HaeIII	GGCC	1 cut(s)	1028
HapII	CCGG	4 cut(s)	615, 1064, 1670, 1835
HgaI	GACGC	3 cut(s)	1166, 1373, 1937
HhaI	GCGC	4 cut(s)	1207, 1243, 1390, 1819
Hin1I	GRCGYC	1 cut(s)	1365
Hin6I	GCGC	4 cut(s)	1205, 1241, 1388, 1817
HinP1I	GCGC	4 cut(s)	1205, 1241, 1388, 1817
HindIII	AAGCTT	4 cut(s)	931, 1429, 1482, 1957
HinfI	GANTC	9 cut(s)	87, 603, 661, 1037, 1751, 1788, 1982, 2027, 2133
HpaII	CCGG	4 cut(s)	615, 1064, 1670, 1835
HphI	GGTGA	6 cut(s)	67, 146, 711, 1373, 1389, 1538
Hpy166II	GTNNAC	4 cut(s)	86, 578, 1711, 1772
Hpy188I	TCNGA	7 cut(s)	837, 867, 967, 1138, 1324, 2216, 2239
Hpy8I	GTNNAC	4 cut(s)	86, 578, 1711, 1772
HpyCH4III	ACNGT	4 cut(s)	70, 215, 1270, 1378
HpyCH4IV	ACGT	1 cut(s)	304
HpyF3I	CTNAG	4 cut(s)	89, 957, 1137, 2236
HpySE526I	ACGT	1 cut(s)	304
Hsp92I	GRCGYC	1 cut(s)	1365
HspAI	GCGC	4 cut(s)	1205, 1241, 1388, 1817
KpnI	GGTACC	1 cut(s)	615
Ksp22I	TGATCA	2 cut(s)	472, 832
LguI	GCTCTTC	1 cut(s)	1692
LmnI	GCTCC	6 cut(s)	159, 178, 276, 1147, 1165, 1828
MaeII	ACGT	1 cut(s)	304
MaeIII	GTNAC	9 cut(s)	419, 717, 981, 1016, 1361, 1372, 1378, 1395, 2261
MflI	RGATCY	7 cut(s)	218, 353, 404, 455, 509, 1330, 1610
MhlI	GDGCHC	2 cut(s)	693, 2183
MluCI	AATT	9 cut(s)	8, 28, 248, 595, 1103, 1492, 2012, 2096, 2114
MlyI	GAGTC	2 cut(s)	81, 1031
MmeI	TCCRAC	2 cut(s)	280, 906
Mph1103I	ATGCAT	2 cut(s)	1538, 1968
MroXI	GAANNNNTTC	2 cut(s)	485, 1701
MseI	TTAA	2 cut(s)	1106, 1869
MslI	CAYNNNNRTG	4 cut(s)	111, 474, 846, 2106
MspI	CCGG	4 cut(s)	615, 1064, 1670, 1835
MspR9I	CCNGG	5 cut(s)	38, 616, 1236, 1767, 1836
Mva1269I	GAATGC	1 cut(s)	904
MvaI	CCWGG	3 cut(s)	38, 1236, 1767
NciI	CCSGG	2 cut(s)	616, 1836
NlaIV	GGNNCC	8 cut(s)	180, 220, 613, 1059, 1068, 1143, 1763, 2173
NmuCI	GTSAC	5 cut(s)	419, 717, 981, 1361, 1395
NsiI	ATGCAT	2 cut(s)	1538, 1968
NspI	RCATGY	5 cut(s)	110, 845, 1189, 1466, 1798
NspV	TTCGAA	1 cut(s)	489
PaeI	GCATGC	1 cut(s)	845
PagI	TCATGA	3 cut(s)	469, 475, 2023
PaqCI	CACCTGC	2 cut(s)	1184, 1211
PciI	ACATGT	1 cut(s)	106
PciSI	GCTCTTC	1 cut(s)	1692
PcsI	WCGNNNNNNNCGW	1 cut(s)	1856
PctI	GAATGC	1 cut(s)	904
PdmI	GAANNNNTTC	2 cut(s)	485, 1701
PfeI	GAWTC	7 cut(s)	603, 661, 1751, 1788, 1982, 2027, 2133
PflMI	CCANNNNNTGG	1 cut(s)	1778
PleI	GAGTC	2 cut(s)	81, 1031
PpsI	GAGTC	2 cut(s)	81, 1031
PscI	ACATGT	1 cut(s)	106
PshBI	ATTAAT	1 cut(s)	1869
Psp124BI	GAGCTC	1 cut(s)	2183
Psp6I	CCWGG	3 cut(s)	36, 1234, 1765
PspEI	GGTNACC	2 cut(s)	717, 2261
PspFI	CCCAGC	1 cut(s)	2228
PspGI	CCWGG	3 cut(s)	36, 1234, 1765
PspN4I	GGNNCC	8 cut(s)	180, 220, 613, 1059, 1068, 1143, 1763, 2173
PspPI	GGNCC	4 cut(s)	1026, 1066, 1711, 1769
PstI	CTGCAG	7 cut(s)	19, 1195, 1222, 1249, 1395, 1441, 1575
PstNI	CAGNNNCTG	1 cut(s)	1382
PsuI	RGATCY	7 cut(s)	218, 353, 404, 455, 509, 1330, 1610
RsaI	GTAC	9 cut(s)	393, 613, 1122, 1282, 1300, 1314, 1347, 1499, 1950
RsaNI	GTAC	9 cut(s)	392, 612, 1121, 1281, 1299, 1313, 1346, 1498, 1949
RseI	CAYNNNNRTG	4 cut(s)	111, 474, 846, 2106
SacI	GAGCTC	1 cut(s)	2183
SapI	GCTCTTC	1 cut(s)	1692
SaqAI	TTAA	2 cut(s)	1106, 1869
Sau96I	GGNCC	4 cut(s)	1026, 1066, 1711, 1769
SbfI	CCTGCAGG	2 cut(s)	1195, 1222
SchI	GAGTC	2 cut(s)	81, 1031
ScrFI	CCNGG	5 cut(s)	38, 616, 1236, 1767, 1836
SdaI	CCTGCAGG	2 cut(s)	1195, 1222
SduI	GDGCHC	2 cut(s)	693, 2183
SfcI	CTRYAG	7 cut(s)	15, 1191, 1218, 1245, 1391, 1437, 1571
SfuI	TTCGAA	1 cut(s)	489
SinI	GGWCC	3 cut(s)	1066, 1711, 1769
SmiMI	CAYNNNNRTG	4 cut(s)	111, 474, 846, 2106
SmlI	CTYRAG	2 cut(s)	2176, 2182
SmoI	CTYRAG	2 cut(s)	2176, 2182
SpeI	ACTAGT	2 cut(s)	1295, 1352
SphI	GCATGC	1 cut(s)	845
Sse8387I	CCTGCAGG	2 cut(s)	1195, 1222
Sse9I	AATT	9 cut(s)	8, 28, 248, 595, 1103, 1492, 2012, 2096, 2114
SsiI	CCGC	4 cut(s)	609, 1113, 1446, 2006
SspI	AATATT	2 cut(s)	79, 554
SstI	GAGCTC	1 cut(s)	2183
StyD4I	CCNGG	5 cut(s)	36, 614, 1234, 1765, 1834
TaaI	ACNGT	4 cut(s)	70, 215, 1270, 1378
TaiI	ACGT	1 cut(s)	307
TaqI	TCGA	2 cut(s)	489, 2252
TasI	AATT	9 cut(s)	8, 28, 248, 595, 1103, 1492, 2012, 2096, 2114
TatI	WGTACW	3 cut(s)	1280, 1312, 1497
TauI	GCSGC	2 cut(s)	1449, 2008
TfiI	GAWTC	7 cut(s)	603, 661, 1751, 1788, 1982, 2027, 2133
Tru1I	TTAA	2 cut(s)	1106, 1869
Tru9I	TTAA	2 cut(s)	1106, 1869
TscAI	CASTG	8 cut(s)	19, 136, 289, 691, 909, 1309, 1713, 2055
TseFI	GTSAC	5 cut(s)	419, 717, 981, 1361, 1395
Tsp45I	GTSAC	5 cut(s)	419, 717, 981, 1361, 1395
TspDTI	ATGAA	9 cut(s)	77, 201, 458, 579, 887, 1517, 1548, 2040, 2169
TspGWI	ACGGA	2 cut(s)	626, 1108
TspRI	CASTG	8 cut(s)	19, 136, 289, 691, 909, 1309, 1713, 2055
Van91I	CCANNNNNTGG	1 cut(s)	1778
VpaK11BI	GGWCC	3 cut(s)	1066, 1711, 1769
VspI	ATTAAT	1 cut(s)	1869
XapI	RAATTY	4 cut(s)	8, 28, 248, 595
XbaI	TCTAGA	1 cut(s)	1529
XceI	RCATGY	5 cut(s)	110, 845, 1189, 1466, 1798
XmiI	GTMKAC	1 cut(s)	85
XmnI	GAANNNNTTC	2 cut(s)	485, 1701
Zsp2I	ATGCAT	2 cut(s)	1538, 1968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.