Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0013863

Physical Location & Seq

Genomic Coordinates Forward (+)

45513205 .. 45519681

Gene Structure 6477 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00032020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGCCCCACTACCAGTGGTGGTACAGAGCAATGGCATCCCAGTCCCACATTGTTGGTTATCCCCGCATAGGACCCAAGAGAGAGCTCAAGTTTGCTTTGGAATCATTCTGGGATGGGAAGACTAGTGCCGACGAATTACAGGCCGTGGCTGCAGGTATCAGGTCAACCGTTTGGAAGAAGCTGGCCGACGCCAGTATTAAGTATATTCCAAGTAACTCCTTCTCATACTATGATCAGATGCTAGACACCACCGCTATGCTTGGGGCTGTACCCCCTAGATTTGGTTGGCAACGTGACGAGGTTGGATTTGAGACTTACTTTTCCATGGCTAGGGGAAATGCCAATGTTCCTGCTATGGAAATGACCAAATGGTTCGACACCAACTACCATTACATTGTACCTGAACTAGGCCCTCATATGAGGTTCTCTTATGCGTCTCACAAGGCAGTGGATGAATTCAAAGAGGCCAAAGCTCTTGGAGTGGATACCGTACCTGTCCTTATAGGACCTGTGTCGTACTTGTTGCTATCAAAACCAGCTAGAGGAATTGAACAATCATGCAGGGAGGTTGTGGCTGAACTGAAGGCAGCTGGTGCTAAATGGGTCCAGTTTGATGAGCCCACCCTTGTATGGGATCTTGATGCCGACCAATTGCAAGCATTTACGCATGCCTACTCAGAGCTAGAGTCATCTTTATCTGGTTTGAATGTTCTGATTGAGACATACTTTGCTGATGTTACAGCTGACAACTACAGGACACTCACCTCTTTGAAGGGTGTTACTGGTTATGGCTTTGACCTGGTTCGTGGAGCAAAGACCCTTGACTTGATTAAGGATGGATTCCCTTCTGGAAAACAACTCTTTGCTGGAGTGGTTGATGGAAGGAATATATGGGCCAATGATCTTGCATCTTCCCTTGGTACCTTGCAGGACCTTGAGGACATTGTTGGAAAAGATAAGATTGTGGTCTCTACATCCTGCTCTCTTCTCCACACTGCAGTTGATCTAGTGAATGAGACTAAGTTAGATAAAGATATTAAATCATGGCTTGCATTTGCAGCCCAAAAAGTTGATGAAGTAAATGCCTTGGCTAATGCATTATCCGGACAAAAGGATGAGGCACTTTTCTCTGCCAATGCTGCAGCTCAAGCTTCAAGAAAATCCTCTCCAATGGTGATGAATGAGGCTGTCCAGAAGGCTGCTGCTGCTCTGAATGGCTCTGAGCAGCGTCGGGGCACAGATGTGGGTGGCAGGCTGGACACTCAGCGAAAGAAGCTGAACCTTCCTATTCTTCCAACAACCACCATCGGATCTTTCCCTCAGACGATGGATATTAGAAGAGTGCGCCGGGAGTACAAGGATAAGAAACTCTCGCTGGAAGATTATGTCAATGCAATCAAGGAGGAAATTAACAAAGTTGTCAAGCTCCAGGAAGAGCTGGACATTGATGTGTTGGTACATGGAGAACCCGAGAGGAATGACATGGTTGAGTATTTTGGAGAGCAATTATCTGGTTTTGCCTTCACTTCCAATGGGTGGGTCCAATCCTATGGTTCCCGTTATGTCAAGCCACCTATTATATATGGTGATGTGAGCCGACCCAAACCCATGACAGTTTTCTGGTCTTCACTGGCTCAGGGTATGACAAAGAAACCGATGAAGGGAATGCTCACTGGACCAGTTACAATTATGAATTGGTCTTTTGTCAGAAACGACCAACCCCGATTTGAGACCTGCTATCAGATTGCTTTGGCCATGAAGGATGAGGTTCAGGATCTTGAGAAAGCCGGTATTACTGTGATCCAAATTGATGAACCTGCTCTAAGAGAAGGTTTGCCTTTGAGGAAGGCGGAGCAAGCTTTCTATCTAGATTGGGCCGTCCGCTCCTTCAGGATAACTAACTGTACTGTTCAAGACACTACGCAGATACACACCCACATGTGCTACTCAAATTTCAATGACATCATTCACTCTATCATTGACATGGATGCCGATGTGATCACGATTGAGAACTCCAAATCAGATGAGAAGCTGCTATCAGTCCTCCCTGAGGGAGTACAATTTGGTTCTGGCATTGGTCCTGGTGTTTATGATGTTCACTCACCAAGGATCCCATCTGACAAAGAAATTCGTGACAAGATTAAGAATATCGTTAAGGTCCTTGAAAACAACAATGTCTGGGTTAACCCAGACTGCGGTCTCAAGACACGCAAGTACTCTGAAGTACTGCCTGCGCTCAGCAATATGGTTGCTGCTGCCAAGTACAATCGGGAGATGTTGACAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0003871 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006555 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008172 GO:0008652 GO:0008705 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016740 GO:0016741 GO:0019752 GO:0032259 GO:0042084 GO:0042085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050667 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00450 ko01100 ko01110 ko01230 map00270 map00450 map01100 map01110 map01230

Pfam Domains

Protein Families

Meth_synt_1 Meth_synt_2

Protein Analysis

762

Amino Acids

85.19

Weight (kDa)

5.8

Isoelectric Point (pI)

30.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Meth_synt_1	PF08267	15 - 315	1.8e-110	Cobalamin-independent synthase, N-terminal domain
Meth_synt_2	PF01717	431 - 754	8.5e-157	Cobalamin-independent synthase, Catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013863)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20980 AT5G20980
fragaria_vesca	FvH4_3g27060 FvH4_3g27060 FvH4_3g27060 FvH4_3g27060 FvH4_3g27060
malus_domestica	MD11G1179000.v1.1
prunus_persica	Prupe.6G151800_v2.0.a1
pyrus_communis	pycom11g15450
rosa_chinensis	RchiOBHm_Chr5g0049641
rosa_laevigata	RLG00000034629
rosa_multiflora	Rmu_sc0013777.1_g000007
rosa_roxburghii	Rroxscaffold_1G00032020
rosa_rugosa	Rorug05G0249400
rosa_samantha	Rh5AG325900
rosa_wichuraiana	Rw5G030800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	143, 1742, 1825
Acc65I	GGTACC	1 cut(s)	920
AccB1I	GGYRCC	1 cut(s)	920
AccB7I	CCANNNNNTGG	1 cut(s)	1536
AccBSI	CCGCTC	1 cut(s)	1884
AccIII	TCCGGA	1 cut(s)	1103
AciI	CCGC	5 cut(s)	64, 252, 1850, 1882, 2196
AclWI	GGATC	6 cut(s)	642, 1318, 1782, 1795, 2104, 2117
AcoI	YGGCCR	2 cut(s)	183, 1752
AcsI	RAATTY	3 cut(s)	455, 1951, 2127
AcuI	CTGAAG	3 cut(s)	602, 1873, 2241
AcyI	GRCGYC	1 cut(s)	189
AflIII	ACRYGT	1 cut(s)	1938
AgsI	TTSAA	8 cut(s)	460, 551, 706, 772, 1155, 1913, 1957, 2165
AhlI	ACTAGT	1 cut(s)	122
AjnI	CCWGG	3 cut(s)	798, 1428, 2080
AleI	CACNNNNGTG	1 cut(s)	1241
Alw21I	GWGCWC	1 cut(s)	87
Alw26I	GTCTC	7 cut(s)	305, 441, 713, 973, 1010, 1724, 2204
AlwI	GGATC	6 cut(s)	642, 1318, 1782, 1795, 2104, 2117
Ama87I	CYCGRG	1 cut(s)	1469
Aor13HI	TCCGGA	1 cut(s)	1103
AoxI	GGCC	7 cut(s)	141, 183, 409, 465, 894, 1752, 1875
ApoI	RAATTY	3 cut(s)	455, 1951, 2127
Asp718I	GGTACC	1 cut(s)	920
AspLEI	GCGC	2 cut(s)	1347, 2236
AsuC2I	CCSGG	1 cut(s)	1349
AsuHPI	GGTGA	4 cut(s)	754, 1186, 1598, 2094
AvaI	CYCGRG	1 cut(s)	1469
AvaII	GGWCC	8 cut(s)	71, 506, 604, 931, 1540, 1676, 2078, 2158
AxyI	CCTNAGG	1 cut(s)	2049
BaeGI	GKGCMC	1 cut(s)	1238
BalI	TGGCCA	1 cut(s)	1754
BamHI	GGATCC	1 cut(s)	2109
BanI	GGYRCC	1 cut(s)	920
BanII	GRGCYC	2 cut(s)	87, 621
BbsI	GAAGAC	2 cut(s)	125, 1617
Bbv12I	GWGCWC	1 cut(s)	87
BccI	CCATC	6 cut(s)	107, 830, 872, 1313, 1321, 2122
BceAI	ACGGC	2 cut(s)	128, 1862
BciT130I	CCWGG	3 cut(s)	800, 1430, 2082
BciVI	GTATCC	1 cut(s)	478
BclI	TGATCA	2 cut(s)	232, 1998
BcnI	CCSGG	1 cut(s)	1349
BcoDI	GTCTC	7 cut(s)	305, 441, 713, 973, 1010, 1724, 2204
BcuI	ACTAGT	1 cut(s)	122
BfaI	CTAG	9 cut(s)	123, 242, 276, 330, 407, 540, 683, 1007, 1868
BfmI	CTRYAG	4 cut(s)	150, 751, 996, 1140
BfuAI	ACCTGC	3 cut(s)	143, 1742, 1825
BfuI	GTATCC	1 cut(s)	478
BlpI	GCTNAGC	1 cut(s)	2237
BmcAI	AGTACT	2 cut(s)	2216, 2226
Bme1390I	CCNGG	4 cut(s)	800, 1349, 1430, 2082
Bme18I	GGWCC	8 cut(s)	71, 506, 604, 931, 1540, 1676, 2078, 2158
BmeT110I	CYCGRG	1 cut(s)	1469
BmiI	GGNNCC	6 cut(s)	73, 605, 922, 1541, 1555, 2111
BmrFI	CCNGG	4 cut(s)	800, 1349, 1430, 2082
BmrI	ACTGGG	1 cut(s)	34
BmsI	GCATC	5 cut(s)	44, 228, 631, 917, 1978
BmuI	ACTGGG	1 cut(s)	34
BoxI	GACNNNNGTC	2 cut(s)	511, 2196
BpiI	GAAGAC	2 cut(s)	125, 1617
BpmI	CTGGAG	2 cut(s)	888, 1412
Bpu10I	CCTNAGC	1 cut(s)	1635
Bpu1102I	GCTNAGC	1 cut(s)	2237
BpuEI	CTTGAG	5 cut(s)	71, 956, 1131, 1799, 2186
BpuMI	CCSGG	1 cut(s)	1349
BsaHI	GRCGYC	1 cut(s)	189
BsaI	GGTCTC	3 cut(s)	973, 1724, 2204
BsaJI	CCNNGG	5 cut(s)	144, 324, 916, 1086, 2105
BsaWI	WCCGGW	1 cut(s)	1103
Bse118I	RCCGGY	1 cut(s)	1787
Bse1I	ACTGG	8 cut(s)	13, 40, 192, 607, 787, 1635, 1678, 1679
Bse21I	CCTNAGG	1 cut(s)	2049
Bse3DI	GCAATG	1 cut(s)	36
BseAI	TCCGGA	1 cut(s)	1103
BseBI	CCWGG	3 cut(s)	800, 1430, 2082
BseDI	CCNNGG	5 cut(s)	144, 324, 916, 1086, 2105
BseGI	GGATG	8 cut(s)	35, 118, 457, 841, 974, 1120, 1768, 1993
BseMI	GCAATG	1 cut(s)	36
BseMII	CTCAG	7 cut(s)	690, 1212, 1277, 1334, 1649, 2040, 2251
BseNI	ACTGG	8 cut(s)	13, 40, 192, 607, 787, 1635, 1678, 1679
BseSI	GKGCMC	1 cut(s)	1238
BshFI	GGCC	7 cut(s)	143, 185, 411, 467, 896, 1754, 1877
BshNI	GGYRCC	1 cut(s)	920
BsiHKAI	GWGCWC	1 cut(s)	87
BsiHKCI	CYCGRG	1 cut(s)	1469
BsiSI	CCGG	3 cut(s)	1104, 1348, 1788
BslFI	GGGAC	1 cut(s)	28
BsmAI	GTCTC	7 cut(s)	305, 441, 713, 973, 1010, 1724, 2204
BsmBI	CGTCTC	1 cut(s)	441
BsmFI	GGGAC	1 cut(s)	28
BsmI	GAATGC	1 cut(s)	1671
BsnI	GGCC	7 cut(s)	143, 185, 411, 467, 896, 1754, 1877
Bso31I	GGTCTC	3 cut(s)	973, 1724, 2204
BsoBI	CYCGRG	1 cut(s)	1469
Bsp1286I	GDGCHC	3 cut(s)	87, 621, 1238
Bsp13I	TCCGGA	1 cut(s)	1103
Bsp143I	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
Bsp1720I	GCTNAGC	1 cut(s)	2237
Bsp19I	CCATGG	1 cut(s)	324
BspACI	CCGC	5 cut(s)	64, 252, 1850, 1882, 2196
BspANI	GGCC	7 cut(s)	143, 185, 411, 467, 896, 1754, 1877
BspCNI	CTCAG	7 cut(s)	689, 1213, 1276, 1333, 1648, 2041, 2250
BspEI	TCCGGA	1 cut(s)	1103
BspLI	GGNNCC	6 cut(s)	73, 605, 922, 1541, 1555, 2111
BspMAI	CTGCAG	3 cut(s)	154, 1000, 1144
BspMI	ACCTGC	3 cut(s)	143, 1742, 1825
BspPI	GGATC	6 cut(s)	642, 1318, 1782, 1795, 2104, 2117
BspQI	GCTCTTC	1 cut(s)	1428
BspT107I	GGYRCC	1 cut(s)	920
BspTNI	GGTCTC	3 cut(s)	973, 1724, 2204
BsrBI	CCGCTC	1 cut(s)	1884
BsrDI	GCAATG	1 cut(s)	36
BsrFI	RCCGGY	1 cut(s)	1787
BsrI	ACTGG	8 cut(s)	13, 40, 192, 607, 787, 1635, 1678, 1679
BssAI	RCCGGY	1 cut(s)	1787
BssECI	CCNNGG	5 cut(s)	144, 324, 916, 1086, 2105
BssMI	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	4 cut(s)	324, 916, 1086, 2105
Bst2UI	CCWGG	3 cut(s)	800, 1430, 2082
Bst4CI	ACNGT	6 cut(s)	169, 490, 1615, 1798, 1904, 1909
Bst6I	CTCTTC	3 cut(s)	990, 1333, 1428
BstACI	GRCGYC	1 cut(s)	189
BstAPI	GCANNNNNTGC	1 cut(s)	593
BstC8I	GCNNGC	7 cut(s)	183, 657, 669, 1050, 1253, 1857, 2232
BstDEI	CTNAG	9 cut(s)	676, 1020, 1221, 1263, 1320, 1635, 1823, 2049, 2237
BstDSI	CCRYGG	2 cut(s)	144, 324
BstENI	CCTNNNNNAGG	2 cut(s)	405, 2048
BstF5I	GGATG	8 cut(s)	35, 118, 457, 841, 974, 1120, 1768, 1993
BstHHI	GCGC	2 cut(s)	1347, 2236
BstKTI	GATC	9 cut(s)	235, 637, 904, 1006, 1313, 1777, 1803, 2001, 2112
BstMAI	GTCTC	7 cut(s)	305, 441, 713, 973, 1010, 1724, 2204
BstMBI	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
BstMWI	GCNNNNNNNGC	8 cut(s)	149, 593, 1058, 1139, 1148, 1205, 1273, 1856
BstNI	CCWGG	3 cut(s)	800, 1430, 2082
BstNSI	RCATGY	2 cut(s)	671, 1942
BstPAI	GACNNNNGTC	2 cut(s)	511, 2196
BstSCI	CCNGG	4 cut(s)	798, 1347, 1428, 2080
BstSFI	CTRYAG	4 cut(s)	150, 751, 996, 1140
BstSLI	GKGCMC	1 cut(s)	1238
BstV2I	GAAGAC	2 cut(s)	125, 1617
BstX2I	RGATCY	4 cut(s)	634, 1310, 1774, 2109
BstXI	CCANNNNNNTGG	2 cut(s)	53, 1550
BstYI	RGATCY	4 cut(s)	634, 1310, 1774, 2109
Bsu36I	CCTNAGG	1 cut(s)	2049
BsuI	GTATCC	1 cut(s)	478
BsuRI	GGCC	7 cut(s)	143, 185, 411, 467, 896, 1754, 1877
BtgI	CCRYGG	2 cut(s)	144, 324
BtsCI	GGATG	8 cut(s)	35, 118, 457, 841, 974, 1120, 1768, 1993
BtsI	GCAGTG	2 cut(s)	453, 993
BtsIMutI	CAGTG	5 cut(s)	20, 453, 993, 1628, 1671
BveI	ACCTGC	3 cut(s)	143, 1742, 1825
Cac8I	GCNNGC	7 cut(s)	183, 657, 669, 1050, 1253, 1857, 2232
CfoI	GCGC	2 cut(s)	1347, 2236
Cfr10I	RCCGGY	1 cut(s)	1787
CseI	GACGC	3 cut(s)	197, 423, 1217
CsiI	ACCWGGT	1 cut(s)	798
DdeI	CTNAG	9 cut(s)	676, 1020, 1221, 1263, 1320, 1635, 1823, 2049, 2237
DpnI	GATC	9 cut(s)	234, 636, 903, 1005, 1312, 1776, 1802, 2000, 2111
DpnII	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
EaeI	YGGCCR	2 cut(s)	183, 1752
Eam1104I	CTCTTC	3 cut(s)	990, 1333, 1428
EarI	CTCTTC	3 cut(s)	990, 1333, 1428
EciI	GGCGGA	1 cut(s)	1865
Ecl136II	GAGCTC	1 cut(s)	85
Eco130I	CCWWGG	4 cut(s)	324, 916, 1086, 2105
Eco24I	GRGCYC	2 cut(s)	87, 621
Eco31I	GGTCTC	3 cut(s)	973, 1724, 2204
Eco47I	GGWCC	8 cut(s)	71, 506, 604, 931, 1540, 1676, 2078, 2158
Eco53kI	GAGCTC	1 cut(s)	85
Eco57I	CTGAAG	3 cut(s)	602, 1873, 2241
Eco81I	CCTNAGG	1 cut(s)	2049
Eco88I	CYCGRG	1 cut(s)	1469
EcoICRI	GAGCTC	1 cut(s)	85
EcoNI	CCTNNNNNAGG	2 cut(s)	405, 2048
EcoO109I	RGGNCCY	5 cut(s)	71, 410, 506, 931, 2158
EcoRI	GAATTC	1 cut(s)	455
EcoRII	CCWGG	3 cut(s)	798, 1428, 2080
EcoT14I	CCWWGG	4 cut(s)	324, 916, 1086, 2105
EcoT22I	ATGCAT	1 cut(s)	1099
EcoT38I	GRGCYC	2 cut(s)	87, 621
ErhI	CCWWGG	4 cut(s)	324, 916, 1086, 2105
Esp3I	CGTCTC	1 cut(s)	441
FaqI	GGGAC	1 cut(s)	28
FauI	CCCGC	1 cut(s)	71
FauNDI	CATATG	1 cut(s)	417
FbaI	TGATCA	2 cut(s)	232, 1998
FokI	GGATG	8 cut(s)	22, 125, 464, 848, 961, 1127, 1775, 2000
FriOI	GRGCYC	2 cut(s)	87, 621
FspBI	CTAG	9 cut(s)	123, 242, 276, 330, 407, 540, 683, 1007, 1868
GlaI	GCGC	2 cut(s)	1346, 2235
GsuI	CTGGAG	2 cut(s)	888, 1412
HaeIII	GGCC	7 cut(s)	143, 185, 411, 467, 896, 1754, 1877
HapII	CCGG	3 cut(s)	1104, 1348, 1788
HgaI	GACGC	3 cut(s)	197, 423, 1217
HhaI	GCGC	2 cut(s)	1347, 2236
Hin1I	GRCGYC	1 cut(s)	189
Hin6I	GCGC	2 cut(s)	1345, 2234
HinP1I	GCGC	2 cut(s)	1345, 2234
HincII	GTYRAC	3 cut(s)	165, 2185, 2280
HindII	GTYRAC	3 cut(s)	165, 2185, 2280
HindIII	AAGCTT	2 cut(s)	1149, 1857
HinfI	GANTC	3 cut(s)	101, 686, 840
HpaI	GTTAAC	1 cut(s)	2185
HpaII	CCGG	3 cut(s)	1104, 1348, 1788
HphI	GGTGA	4 cut(s)	754, 1186, 1598, 2094
Hpy166II	GTNNAC	4 cut(s)	165, 2098, 2185, 2280
Hpy8I	GTNNAC	4 cut(s)	165, 2098, 2185, 2280
Hpy99I	CGWCG	3 cut(s)	134, 191, 1233
HpyCH4III	ACNGT	6 cut(s)	169, 490, 1615, 1798, 1904, 1909
HpyCH4IV	ACGT	1 cut(s)	292
HpyF10VI	GCNNNNNNNGC	8 cut(s)	149, 593, 1058, 1139, 1148, 1205, 1273, 1856
HpyF3I	CTNAG	9 cut(s)	676, 1020, 1221, 1263, 1320, 1635, 1823, 2049, 2237
HpySE526I	ACGT	1 cut(s)	292
Hsp92I	GRCGYC	1 cut(s)	189
HspAI	GCGC	2 cut(s)	1345, 2234
Kpn2I	TCCGGA	1 cut(s)	1103
KpnI	GGTACC	1 cut(s)	924
Ksp22I	TGATCA	2 cut(s)	232, 1998
KspAI	GTTAAC	1 cut(s)	2185
Kzo9I	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
LguI	GCTCTTC	1 cut(s)	1428
LmnI	GCTCC	4 cut(s)	809, 1431, 1852, 1889
LweI	GCATC	5 cut(s)	44, 228, 631, 917, 1978
MabI	ACCWGGT	1 cut(s)	798
MaeI	CTAG	9 cut(s)	123, 242, 276, 330, 407, 540, 683, 1007, 1868
MaeII	ACGT	1 cut(s)	292
MaeIII	GTNAC	6 cut(s)	212, 293, 736, 778, 1681, 2132
MalI	GATC	9 cut(s)	234, 636, 903, 1005, 1312, 1776, 1802, 2000, 2111
MbiI	CCGCTC	1 cut(s)	1884
MboI	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
MboII	GAAGA	9 cut(s)	130, 187, 903, 977, 1283, 1350, 1391, 1445, 1617
MfeI	CAATTG	1 cut(s)	650
MflI	RGATCY	4 cut(s)	634, 1310, 1774, 2109
MhlI	GDGCHC	3 cut(s)	87, 621, 1238
MlsI	TGGCCA	1 cut(s)	1754
MluNI	TGGCCA	1 cut(s)	1754
MlyI	GAGTC	1 cut(s)	695
MmeI	TCCRAC	3 cut(s)	283, 928, 1319
Mox20I	TGGCCA	1 cut(s)	1754
Mph1103I	ATGCAT	1 cut(s)	1099
MroI	TCCGGA	1 cut(s)	1103
MscI	TGGCCA	1 cut(s)	1754
MseI	TTAA	7 cut(s)	198, 831, 1038, 1410, 2142, 2154, 2184
MslI	CAYNNNNRTG	5 cut(s)	254, 1241, 1448, 1937, 1982
Msp20I	TGGCCA	1 cut(s)	1754
MspA1I	CMGCKG	2 cut(s)	590, 743
MspI	CCGG	3 cut(s)	1104, 1348, 1788
MspR9I	CCNGG	4 cut(s)	800, 1349, 1430, 2082
MunI	CAATTG	1 cut(s)	650
Mva1269I	GAATGC	1 cut(s)	1671
MvaI	CCWGG	3 cut(s)	800, 1430, 2082
MwoI	GCNNNNNNNGC	8 cut(s)	149, 593, 1058, 1139, 1148, 1205, 1273, 1856
NciI	CCSGG	1 cut(s)	1349
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	1 cut(s)	417
NdeII	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
NlaIV	GGNNCC	6 cut(s)	73, 605, 922, 1541, 1555, 2111
NmuCI	GTSAC	2 cut(s)	293, 2132
NsiI	ATGCAT	1 cut(s)	1099
NspI	RCATGY	2 cut(s)	671, 1942
OliI	CACNNNNGTG	1 cut(s)	1241
PaeI	GCATGC	1 cut(s)	671
PciI	ACATGT	1 cut(s)	1938
PciSI	GCTCTTC	1 cut(s)	1428
PctI	GAATGC	1 cut(s)	1671
PfeI	GAWTC	2 cut(s)	101, 840
PflMI	CCANNNNNTGG	1 cut(s)	1536
PfoI	TCCNGGA	1 cut(s)	1428
PleI	GAGTC	1 cut(s)	694
PpsI	GAGTC	1 cut(s)	694
PpuMI	RGGWCCY	4 cut(s)	71, 506, 931, 2158
PscI	ACATGT	1 cut(s)	1938
PshAI	GACNNNNGTC	2 cut(s)	511, 2196
Psp124BI	GAGCTC	1 cut(s)	87
Psp5II	RGGWCCY	4 cut(s)	71, 506, 931, 2158
Psp6I	CCWGG	3 cut(s)	798, 1428, 2080
PspGI	CCWGG	3 cut(s)	798, 1428, 2080
PspN4I	GGNNCC	6 cut(s)	73, 605, 922, 1541, 1555, 2111
PspPPI	RGGWCCY	4 cut(s)	71, 506, 931, 2158
PstI	CTGCAG	3 cut(s)	154, 1000, 1144
PsuI	RGATCY	4 cut(s)	634, 1310, 1774, 2109
PvuII	CAGCTG	2 cut(s)	590, 743
RseI	CAYNNNNRTG	5 cut(s)	254, 1241, 1448, 1937, 1982
SacI	GAGCTC	1 cut(s)	87
SapI	GCTCTTC	1 cut(s)	1428
SaqAI	TTAA	7 cut(s)	198, 831, 1038, 1410, 2142, 2154, 2184
Sau3AI	GATC	9 cut(s)	232, 634, 901, 1003, 1310, 1774, 1800, 1998, 2109
ScaI	AGTACT	2 cut(s)	2216, 2226
SchI	GAGTC	1 cut(s)	695
ScrFI	CCNGG	4 cut(s)	800, 1349, 1430, 2082
SduI	GDGCHC	3 cut(s)	87, 621, 1238
SexAI	ACCWGGT	1 cut(s)	798
SfaNI	GCATC	5 cut(s)	44, 228, 631, 917, 1978
SfcI	CTRYAG	4 cut(s)	150, 751, 996, 1140
SinI	GGWCC	8 cut(s)	71, 506, 604, 931, 1540, 1676, 2078, 2158
SmiMI	CAYNNNNRTG	5 cut(s)	254, 1241, 1448, 1937, 1982
SmlI	CTYRAG	5 cut(s)	86, 935, 1146, 1778, 2201
SmoI	CTYRAG	5 cut(s)	86, 935, 1146, 1778, 2201
SpeI	ACTAGT	1 cut(s)	122
SphI	GCATGC	1 cut(s)	671
SsiI	CCGC	5 cut(s)	64, 252, 1850, 1882, 2196
SspMI	CTAG	9 cut(s)	123, 242, 276, 330, 407, 540, 683, 1007, 1868
SstI	GAGCTC	1 cut(s)	87
StyD4I	CCNGG	4 cut(s)	798, 1347, 1428, 2080
StyI	CCWWGG	4 cut(s)	324, 916, 1086, 2105
TaaI	ACNGT	6 cut(s)	169, 490, 1615, 1798, 1904, 1909
TaiI	ACGT	1 cut(s)	295
TaqI	TCGA	1 cut(s)	375
TatI	WGTACW	6 cut(s)	1353, 1904, 2056, 2214, 2224, 2262
TfiI	GAWTC	2 cut(s)	101, 840
Tru1I	TTAA	7 cut(s)	198, 831, 1038, 1410, 2142, 2154, 2184
Tru9I	TTAA	7 cut(s)	198, 831, 1038, 1410, 2142, 2154, 2184
TscAI	CASTG	5 cut(s)	20, 453, 1000, 1635, 1678
TseFI	GTSAC	2 cut(s)	293, 2132
Tsp45I	GTSAC	2 cut(s)	293, 2132
TspDTI	ATGAA	7 cut(s)	468, 1089, 1193, 1673, 1706, 1772, 1827
TspRI	CASTG	5 cut(s)	20, 453, 1000, 1635, 1678
Van91I	CCANNNNNTGG	1 cut(s)	1536
VpaK11BI	GGWCC	8 cut(s)	71, 506, 604, 931, 1540, 1676, 2078, 2158
XagI	CCTNNNNNAGG	2 cut(s)	405, 2048
XapI	RAATTY	3 cut(s)	455, 1951, 2127
XbaI	TCTAGA	1 cut(s)	1867
XceI	RCATGY	2 cut(s)	671, 1942
XspI	CTAG	9 cut(s)	123, 242, 276, 330, 407, 540, 683, 1007, 1868
ZrmI	AGTACT	2 cut(s)	2216, 2226
Zsp2I	ATGCAT	1 cut(s)	1099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.