Mitogen-activated protein kinase kinase kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0213001 |
| rosa_laevigata | RLG00000000742 RLG00000013416 |
| rosa_roxburghii | Rroxscaffold_1G00037660 Rroxscaffold_6G00423820 |
| rosa_rugosa | Rorug02G0211600 Rorug03G0217800 Rorug03G0226500 Rorug03G0226500 |
| rosa_samantha | Rh1CG074800 Rh7CG425200 |
| rosa_wichuraiana | Rw6G011880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 278 |
| AcsI | RAATTY | 1 cut(s) | 145 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 54, 70 |
| AgsI | TTSAA | 3 cut(s) | 11, 24, 251 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 21, 53 |
| AluBI | AGCT | 2 cut(s) | 70, 281 |
| AluI | AGCT | 2 cut(s) | 70, 281 |
| AlwI | GGATC | 1 cut(s) | 278 |
| Ama87I | CYCGRG | 1 cut(s) | 65 |
| AoxI | GGCC | 2 cut(s) | 44, 60 |
| ApeKI | GCWGC | 1 cut(s) | 74 |
| ApoI | RAATTY | 1 cut(s) | 145 |
| AspS9I | GGNCC | 2 cut(s) | 45, 61 |
| AvaI | CYCGRG | 1 cut(s) | 65 |
| BbvI | GCAGC | 1 cut(s) | 61 |
| BccI | CCATC | 3 cut(s) | 36, 52, 184 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 56, 90 |
| BfaI | CTAG | 1 cut(s) | 206 |
| BfmI | CTRYAG | 1 cut(s) | 256 |
| BisI | GCNGC | 1 cut(s) | 75 |
| BlsI | GCNGC | 1 cut(s) | 76 |
| BmeT110I | CYCGRG | 1 cut(s) | 65 |
| BmgT120I | GGNCC | 2 cut(s) | 45, 61 |
| BmiI | GGNNCC | 3 cut(s) | 47, 63, 173 |
| BmsI | GCATC | 1 cut(s) | 127 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 54, 70 |
| Bse3DI | GCAATG | 1 cut(s) | 173 |
| BseGI | GGATG | 2 cut(s) | 47, 63 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 54, 70 |
| BseMI | GCAATG | 1 cut(s) | 173 |
| BseMII | CTCAG | 1 cut(s) | 171 |
| BseXI | GCAGC | 1 cut(s) | 61 |
| BshFI | GGCC | 2 cut(s) | 46, 62 |
| BsiHKCI | CYCGRG | 1 cut(s) | 65 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 54, 70 |
| BsnI | GGCC | 2 cut(s) | 46, 62 |
| BsoBI | CYCGRG | 1 cut(s) | 65 |
| Bsp143I | GATC | 1 cut(s) | 283 |
| BspANI | GGCC | 2 cut(s) | 46, 62 |
| BspCNI | CTCAG | 1 cut(s) | 172 |
| BspLI | GGNNCC | 3 cut(s) | 47, 63, 173 |
| BspPI | GGATC | 1 cut(s) | 278 |
| BsrDI | GCAATG | 1 cut(s) | 173 |
| BssMI | GATC | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 4 cut(s) | 72, 164, 186, 279 |
| BstDEI | CTNAG | 2 cut(s) | 180, 288 |
| BstF5I | GGATG | 2 cut(s) | 47, 63 |
| BstKTI | GATC | 1 cut(s) | 286 |
| BstMBI | GATC | 1 cut(s) | 283 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 163 |
| BstSFI | CTRYAG | 1 cut(s) | 256 |
| BstV1I | GCAGC | 1 cut(s) | 61 |
| BsuRI | GGCC | 2 cut(s) | 46, 62 |
| BtsCI | GGATG | 2 cut(s) | 47, 63 |
| Cac8I | GCNNGC | 4 cut(s) | 72, 164, 186, 279 |
| Cfr13I | GGNCC | 2 cut(s) | 45, 61 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviJI | RGCY | 6 cut(s) | 46, 62, 70, 74, 157, 281 |
| CviKI_1 | RGCY | 6 cut(s) | 46, 62, 70, 74, 157, 281 |
| DdeI | CTNAG | 2 cut(s) | 180, 288 |
| DpnI | GATC | 1 cut(s) | 285 |
| DpnII | GATC | 1 cut(s) | 283 |
| Eco88I | CYCGRG | 1 cut(s) | 65 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 5 cut(s) | 107, 135, 160, 258, 272 |
| FatI | CATG | 1 cut(s) | 133 |
| Fnu4HI | GCNGC | 1 cut(s) | 75 |
| FokI | GGATG | 2 cut(s) | 54, 70 |
| Fsp4HI | GCNGC | 1 cut(s) | 75 |
| FspBI | CTAG | 1 cut(s) | 206 |
| GluI | GCNGC | 1 cut(s) | 75 |
| HaeIII | GGCC | 2 cut(s) | 46, 62 |
| Hin1II | CATG | 1 cut(s) | 137 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| HpyAV | CCTTC | 1 cut(s) | 225 |
| HpyCH4V | TGCA | 3 cut(s) | 77, 140, 166 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 163 |
| HpyF3I | CTNAG | 2 cut(s) | 180, 288 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| Kzo9I | GATC | 1 cut(s) | 283 |
| LpnPI | CCDG | 3 cut(s) | 56, 123, 132 |
| Lsp1109I | GCAGC | 1 cut(s) | 61 |
| LweI | GCATC | 1 cut(s) | 127 |
| MaeI | CTAG | 1 cut(s) | 206 |
| MalI | GATC | 1 cut(s) | 285 |
| MboI | GATC | 1 cut(s) | 283 |
| MluCI | AATT | 1 cut(s) | 145 |
| MnlI | CCTC | 1 cut(s) | 147 |
| MseI | TTAA | 1 cut(s) | 84 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 163 |
| NdeII | GATC | 1 cut(s) | 283 |
| NlaIII | CATG | 1 cut(s) | 137 |
| NlaIV | GGNNCC | 3 cut(s) | 47, 63, 173 |
| PkrI | GCNGC | 1 cut(s) | 76 |
| PspN4I | GGNNCC | 3 cut(s) | 47, 63, 173 |
| PspPI | GGNCC | 2 cut(s) | 45, 61 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| SatI | GCNGC | 1 cut(s) | 75 |
| Sau3AI | GATC | 1 cut(s) | 283 |
| Sau96I | GGNCC | 2 cut(s) | 45, 61 |
| SetI | ASST | 4 cut(s) | 72, 106, 263, 283 |
| SfaNI | GCATC | 1 cut(s) | 127 |
| SfcI | CTRYAG | 1 cut(s) | 256 |
| Sse9I | AATT | 1 cut(s) | 145 |
| SspI | AATATT | 1 cut(s) | 81 |
| SspMI | CTAG | 1 cut(s) | 206 |
| TasI | AATT | 1 cut(s) | 145 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TseI | GCWGC | 1 cut(s) | 74 |
| TspDTI | ATGAA | 1 cut(s) | 287 |
| XapI | RAATTY | 1 cut(s) | 145 |
| XspI | CTAG | 1 cut(s) | 206 |