Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003969

Physical Location & Seq

Genomic Coordinates Reverse (-)

19834390 .. 19840122

Gene Structure 5733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0217800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 951 bp

ATGGCTATGCAAACTGTTTATTTCAAAGAACATGAAGGACTTGGGCAGTTGTCATCAGTGTTACCTTGGTGGGGTACTGCCTTTGGATCTCAACAAGTTTATGGCGAATCCTGTGGCCAGTCGAAACCTTTTACCATGGAGCTTCCCAATAATGGAGACCAACTCACTGCCACTAAGCAACCCGGGCGGGGCACTGAACAAGGACTGGATAAAGGGAACACAAATCAGTTCACTATCTTCCCTGGGGATGGGCAAAAATCTCAGCCAGCGATCTCTCTGCAATCATCCCCACCAAAATATCGTGGTCATTTTGAGCTGGGATTCAGCCAGCCTATGATTTGTGGAAAATATCCATACATGGATCAATGTTATGGACTCTTCTCAACATATGGACCTCAAGTTCCGGGACGCATTATGCTGCCACTGAATTTGACTACAGATGAAGGACCGATTTATGTCAATGCTAAGCAATACCACGGAATCATCCGGCGCCGACAATCCCGTGCAAAGGCAGTCATGGAGAACAGAGCAGCTAGACACCGTAAGCCCTATATGCATGAATCACGCCATCTTCATGCCATGCGCCGACCAAGGGGATGTGGTGGTCGTTTTCTGAATACCAAGACTTCAAACAATGGGAAAGGTAGAAATGAAATGAAGCAAGTTGGTGAAGTGCAGCTGTTTAGGCACTCCGGTTCTCAGAGCTCTGAAGTGCTGCAATCCGAGAGTGGGACTTTGAACTCATCAAAAACAAATGGCAGCAGTTCCAACATATCAGGCTCAGAGGTGACCAGTACGTACTCTAGGGGAGATCTTGATCGTTTTTCAATGAATCATCATCATCTCGGGCCCTCAGTGCATTCTCTGTCAGACATGATGGATGGTCGTGGCATGGTTATGCCCACAAAATGGATTGCAGCAGTGGATAACTGCTGCAACCTCAAAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000186 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko04010 ko04540 ko04912 map04010 map04540 map04912

Pfam Domains

Protein Families

Pkinase

Protein Analysis

316

Amino Acids

35.06

Weight (kDa)

9.49

Isoelectric Point (pI)

46.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBFB_NFYA	PF02045	150 - 204	8.9e-26	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003969)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0458311 RchiOBHm_Chr3g0479821 RchiOBHm_Chr5g0058211 RchiOBHm_Chr7g0218771
rosa_laevigata	RLG00000002203 RLG00000002741 RLG00000010568 RLG00000030396 RLG00000032185
rosa_multiflora	Rmu_sc0020639.1_g000001 Rmu_ssc0000183.1_g000020
rosa_roxburghii	Rroxscaffold_1G00004630 Rroxscaffold_3G00275310
rosa_rugosa	Rorug02G0651800 Rorug03G0217800 Rorug03G0241500
rosa_samantha	Rh1AG036900 Rh1AG340400 Rh2AG308600 Rh2BG290700 Rh3AG229500 Rh3CG308300 Rh5CG223900 Rh5CG415900 Rh6BG135900 Rh6CG134300 Rh6DG000600 Rh6DG120600 Rh7CG365200 Rh7CG433800
rosa_wichuraiana	Rw1G020130 Rw2G005810 Rw2G007320 Rw2G017470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	489
AccB7I	CCANNNNNTGG	1 cut(s)	909
AciI	CCGC	1 cut(s)	187
AclWI	GGATC	2 cut(s)	94, 369
AcoI	YGGCCR	1 cut(s)	115
AcsI	RAATTY	1 cut(s)	427
AcuI	CTGAAG	1 cut(s)	729
AcyI	GRCGYC	1 cut(s)	490
AfaI	GTAC	3 cut(s)	76, 796, 800
AfiI	CCNNNNNNNGG	8 cut(s)	71, 152, 188, 248, 508, 592, 729, 909
AgsI	TTSAA	4 cut(s)	25, 630, 739, 828
AjnI	CCWGG	1 cut(s)	241
AloI	GAACNNNNNNTCC	2 cut(s)	384, 416
AluBI	AGCT	5 cut(s)	142, 316, 533, 679, 705
AluI	AGCT	5 cut(s)	142, 316, 533, 679, 705
Alw21I	GWGCWC	1 cut(s)	707
Alw26I	GTCTC	1 cut(s)	150
AlwI	GGATC	2 cut(s)	94, 369
Ama87I	CYCGRG	2 cut(s)	182, 845
AoxI	GGCC	2 cut(s)	115, 848
ApaI	GGGCCC	1 cut(s)	852
ApeKI	GCWGC	7 cut(s)	418, 530, 676, 715, 759, 917, 933
ApoI	RAATTY	1 cut(s)	427
AspLEI	GCGC	2 cut(s)	492, 585
AspS9I	GGNCC	4 cut(s)	392, 446, 848, 849
AsuC2I	CCSGG	3 cut(s)	183, 184, 405
AsuHPI	GGTGA	2 cut(s)	680, 799
AvaI	CYCGRG	2 cut(s)	182, 845
AvaII	GGWCC	2 cut(s)	392, 446
BaeGI	GKGCMC	2 cut(s)	194, 852
BalI	TGGCCA	1 cut(s)	117
BanI	GGYRCC	1 cut(s)	489
BanII	GRGCYC	2 cut(s)	707, 852
Bbv12I	GWGCWC	1 cut(s)	707
BbvI	GCAGC	7 cut(s)	405, 542, 688, 702, 771, 920, 929
BccI	CCATC	4 cut(s)	242, 576, 871, 875
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	1 cut(s)	243
BcnI	CCSGG	3 cut(s)	183, 184, 405
BcoDI	GTCTC	1 cut(s)	150
BfaI	CTAG	2 cut(s)	534, 804
BfmI	CTRYAG	1 cut(s)	435
BfoI	RGCGCY	1 cut(s)	493
BglII	AGATCT	1 cut(s)	811
BisI	GCNGC	7 cut(s)	419, 531, 677, 716, 760, 918, 934
BlpI	GCTNAGC	1 cut(s)	465
BlsI	GCNGC	7 cut(s)	420, 532, 678, 717, 761, 919, 935
Bme1390I	CCNGG	4 cut(s)	183, 184, 243, 405
Bme18I	GGWCC	2 cut(s)	392, 446
BmeT110I	CYCGRG	2 cut(s)	182, 845
BmgT120I	GGNCC	4 cut(s)	392, 446, 848, 849
BmiI	GGNNCC	2 cut(s)	491, 850
BmrFI	CCNGG	4 cut(s)	183, 184, 243, 405
BplI	GAGNNNNNCTC	2 cut(s)	147, 179
Bpu1102I	GCTNAGC	1 cut(s)	465
BpuEI	CTTGAG	1 cut(s)	381
BpuMI	CCSGG	3 cut(s)	183, 184, 405
BsaAI	YACGTR	1 cut(s)	798
BsaBI	GATNNNNATC	1 cut(s)	816
BsaHI	GRCGYC	1 cut(s)	490
BsaI	GGTCTC	1 cut(s)	150
BsaJI	CCNNGG	7 cut(s)	65, 135, 182, 241, 242, 475, 590
BsaWI	WCCGGW	1 cut(s)	692
Bsc4I	CCNNNNNNNGG	8 cut(s)	71, 152, 188, 248, 508, 592, 729, 909
Bse1I	ACTGG	3 cut(s)	118, 210, 792
Bse8I	GATNNNNATC	1 cut(s)	816
BseBI	CCWGG	1 cut(s)	243
BseDI	CCNNGG	7 cut(s)	65, 135, 182, 241, 242, 475, 590
BseGI	GGATG	5 cut(s)	253, 284, 483, 602, 886
BseJI	GATNNNNATC	1 cut(s)	816
BseLI	CCNNNNNNNGG	8 cut(s)	71, 152, 188, 248, 508, 592, 729, 909
BseMII	CTCAG	4 cut(s)	275, 713, 795, 867
BseNI	ACTGG	3 cut(s)	118, 210, 792
BseSI	GKGCMC	2 cut(s)	194, 852
BseXI	GCAGC	7 cut(s)	405, 542, 688, 702, 771, 920, 929
BseYI	CCCAGC	1 cut(s)	316
BsgI	GTGCAG	1 cut(s)	695
BshFI	GGCC	2 cut(s)	117, 850
BshNI	GGYRCC	1 cut(s)	489
BsiHKAI	GWGCWC	1 cut(s)	707
BsiHKCI	CYCGRG	2 cut(s)	182, 845
BsiSI	CCGG	4 cut(s)	183, 404, 487, 693
BslFI	GGGAC	2 cut(s)	420, 745
BslI	CCNNNNNNNGG	8 cut(s)	71, 152, 188, 248, 508, 592, 729, 909
BsmAI	GTCTC	1 cut(s)	150
BsmFI	GGGAC	2 cut(s)	420, 745
BsmI	GAATGC	1 cut(s)	859
BsnI	GGCC	2 cut(s)	117, 850
Bso31I	GGTCTC	1 cut(s)	150
BsoBI	CYCGRG	2 cut(s)	182, 845
Bsp120I	GGGCCC	1 cut(s)	848
Bsp1286I	GDGCHC	3 cut(s)	194, 707, 852
Bsp143I	GATC	5 cut(s)	86, 270, 361, 811, 817
Bsp1720I	GCTNAGC	1 cut(s)	465
Bsp19I	CCATGG	1 cut(s)	135
BspACI	CCGC	1 cut(s)	187
BspANI	GGCC	2 cut(s)	117, 850
BspCNI	CTCAG	4 cut(s)	274, 712, 794, 866
BspLI	GGNNCC	2 cut(s)	491, 850
BspPI	GGATC	2 cut(s)	94, 369
BspT107I	GGYRCC	1 cut(s)	489
BspTNI	GGTCTC	1 cut(s)	150
BsrI	ACTGG	3 cut(s)	118, 210, 792
BssECI	CCNNGG	7 cut(s)	65, 135, 182, 241, 242, 475, 590
BssMI	GATC	5 cut(s)	86, 270, 361, 811, 817
BssNI	GRCGYC	1 cut(s)	490
BssT1I	CCWWGG	3 cut(s)	65, 135, 590
Bst2UI	CCWGG	1 cut(s)	243
Bst4CI	ACNGT	2 cut(s)	16, 542
Bst6I	CTCTTC	1 cut(s)	383
BstACI	GRCGYC	1 cut(s)	490
BstBAI	YACGTR	1 cut(s)	798
BstC8I	GCNNGC	2 cut(s)	267, 329
BstDEI	CTNAG	6 cut(s)	174, 261, 465, 699, 781, 853
BstDSI	CCRYGG	2 cut(s)	135, 475
BstEII	GGTNACC	1 cut(s)	787
BstF5I	GGATG	5 cut(s)	253, 284, 483, 602, 886
BstH2I	RGCGCY	1 cut(s)	493
BstHHI	GCGC	2 cut(s)	492, 585
BstKTI	GATC	5 cut(s)	89, 273, 364, 814, 820
BstMAI	GTCTC	1 cut(s)	150
BstMBI	GATC	5 cut(s)	86, 270, 361, 811, 817
BstMWI	GCNNNNNNNGC	4 cut(s)	184, 553, 685, 856
BstNI	CCWGG	1 cut(s)	243
BstPI	GGTNACC	1 cut(s)	787
BstSCI	CCNGG	4 cut(s)	181, 182, 241, 403
BstSFI	CTRYAG	1 cut(s)	435
BstSLI	GKGCMC	2 cut(s)	194, 852
BstSNI	TACGTA	1 cut(s)	798
BstV1I	GCAGC	7 cut(s)	405, 542, 688, 702, 771, 920, 929
BstX2I	RGATCY	2 cut(s)	86, 811
BstYI	RGATCY	2 cut(s)	86, 811
BsuRI	GGCC	2 cut(s)	117, 850
BtgI	CCRYGG	2 cut(s)	135, 475
BtsCI	GGATG	5 cut(s)	253, 284, 483, 602, 886
BtsI	GCAGTG	2 cut(s)	165, 927
BtsIMutI	CAGTG	6 cut(s)	63, 165, 192, 422, 861, 927
Cac8I	GCNNGC	2 cut(s)	267, 329
CfoI	GCGC	2 cut(s)	492, 585
Cfr13I	GGNCC	4 cut(s)	392, 446, 848, 849
Cfr9I	CCCGGG	1 cut(s)	182
CseI	GACGC	1 cut(s)	417
Csp6I	GTAC	3 cut(s)	75, 795, 799
CspCI	CAANNNNNGTGG	2 cut(s)	411, 446
CviAII	CATG	9 cut(s)	32, 136, 358, 517, 557, 575, 580, 874, 892
CviQI	GTAC	3 cut(s)	75, 795, 799
DdeI	CTNAG	6 cut(s)	174, 261, 465, 699, 781, 853
DinI	GGCGCC	1 cut(s)	491
DpnI	GATC	5 cut(s)	88, 272, 363, 813, 819
DpnII	GATC	5 cut(s)	86, 270, 361, 811, 817
EaeI	YGGCCR	1 cut(s)	115
Eam1104I	CTCTTC	1 cut(s)	383
EarI	CTCTTC	1 cut(s)	383
Ecl136II	GAGCTC	1 cut(s)	705
Eco105I	TACGTA	1 cut(s)	798
Eco130I	CCWWGG	3 cut(s)	65, 135, 590
Eco24I	GRGCYC	2 cut(s)	707, 852
Eco31I	GGTCTC	1 cut(s)	150
Eco47I	GGWCC	2 cut(s)	392, 446
Eco53kI	GAGCTC	1 cut(s)	705
Eco57I	CTGAAG	1 cut(s)	729
Eco88I	CYCGRG	2 cut(s)	182, 845
Eco91I	GGTNACC	1 cut(s)	787
EcoICRI	GAGCTC	1 cut(s)	705
EcoO109I	RGGNCCY	1 cut(s)	849
EcoO65I	GGTNACC	1 cut(s)	787
EcoRII	CCWGG	1 cut(s)	241
EcoT14I	CCWWGG	3 cut(s)	65, 135, 590
EcoT22I	ATGCAT	1 cut(s)	558
EcoT38I	GRGCYC	2 cut(s)	707, 852
EgeI	GGCGCC	1 cut(s)	491
EheI	GGCGCC	1 cut(s)	491
ErhI	CCWWGG	3 cut(s)	65, 135, 590
FaeI	CATG	9 cut(s)	35, 139, 361, 520, 560, 578, 583, 877, 895
FaqI	GGGAC	2 cut(s)	420, 745
FatI	CATG	9 cut(s)	31, 135, 357, 516, 556, 574, 579, 873, 891
FauI	CCCGC	1 cut(s)	180
FauNDI	CATATG	1 cut(s)	388
Fnu4HI	GCNGC	7 cut(s)	419, 531, 677, 716, 760, 918, 934
FokI	GGATG	5 cut(s)	260, 271, 470, 609, 893
FriOI	GRGCYC	2 cut(s)	707, 852
Fsp4HI	GCNGC	7 cut(s)	419, 531, 677, 716, 760, 918, 934
FspBI	CTAG	2 cut(s)	534, 804
GlaI	GCGC	2 cut(s)	491, 584
GluI	GCNGC	7 cut(s)	419, 531, 677, 716, 760, 918, 934
GsaI	CCCAGC	1 cut(s)	320
HaeII	RGCGCY	1 cut(s)	493
HaeIII	GGCC	2 cut(s)	117, 850
HapII	CCGG	4 cut(s)	183, 404, 487, 693
HgaI	GACGC	1 cut(s)	417
HhaI	GCGC	2 cut(s)	492, 585
Hin1I	GRCGYC	1 cut(s)	490
Hin1II	CATG	9 cut(s)	35, 139, 361, 520, 560, 578, 583, 877, 895
Hin6I	GCGC	2 cut(s)	490, 583
HinP1I	GCGC	2 cut(s)	490, 583
HinfI	GANTC	6 cut(s)	107, 321, 375, 480, 560, 832
HpaII	CCGG	4 cut(s)	183, 404, 487, 693
HphI	GGTGA	2 cut(s)	680, 799
Hpy166II	GTNNAC	1 cut(s)	231
Hpy188I	TCNGA	7 cut(s)	615, 702, 709, 724, 784, 871, 950
Hpy188III	TCNNGA	1 cut(s)	815
Hpy8I	GTNNAC	1 cut(s)	231
HpyAV	CCTTC	2 cut(s)	29, 437
HpyCH4III	ACNGT	2 cut(s)	16, 542
HpyCH4IV	ACGT	1 cut(s)	797
HpyCH4V	TGCA	9 cut(s)	10, 280, 506, 556, 676, 718, 859, 917, 936
HpyF10VI	GCNNNNNNNGC	4 cut(s)	184, 553, 685, 856
HpyF3I	CTNAG	6 cut(s)	174, 261, 465, 699, 781, 853
HpySE526I	ACGT	1 cut(s)	797
Hsp92I	GRCGYC	1 cut(s)	490
Hsp92II	CATG	9 cut(s)	35, 139, 361, 520, 560, 578, 583, 877, 895
HspAI	GCGC	2 cut(s)	490, 583
KasI	GGCGCC	1 cut(s)	489
Kzo9I	GATC	5 cut(s)	86, 270, 361, 811, 817
LmnI	GCTCC	1 cut(s)	139
Lsp1109I	GCAGC	7 cut(s)	405, 542, 688, 702, 771, 920, 929
MaeI	CTAG	2 cut(s)	534, 804
MaeII	ACGT	1 cut(s)	797
MaeIII	GTNAC	2 cut(s)	60, 787
MalI	GATC	5 cut(s)	88, 272, 363, 813, 819
MboI	GATC	5 cut(s)	86, 270, 361, 811, 817
MboII	GAAGA	3 cut(s)	229, 370, 563
MflI	RGATCY	2 cut(s)	86, 811
MhlI	GDGCHC	3 cut(s)	194, 707, 852
MlsI	TGGCCA	1 cut(s)	117
MluCI	AATT	1 cut(s)	427
MluNI	TGGCCA	1 cut(s)	117
Mly113I	GGCGCC	1 cut(s)	490
MlyI	GAGTC	1 cut(s)	369
MmeI	TCCRAC	1 cut(s)	792
MnlI	CCTC	4 cut(s)	405, 778, 862, 950
Mox20I	TGGCCA	1 cut(s)	117
Mph1103I	ATGCAT	1 cut(s)	558
MscI	TGGCCA	1 cut(s)	117
MslI	CAYNNNNRTG	2 cut(s)	573, 896
Msp20I	TGGCCA	1 cut(s)	117
MspA1I	CMGCKG	1 cut(s)	679
MspI	CCGG	4 cut(s)	183, 404, 487, 693
MspR9I	CCNGG	4 cut(s)	183, 184, 243, 405
Mva1269I	GAATGC	1 cut(s)	859
MvaI	CCWGG	1 cut(s)	243
MwoI	GCNNNNNNNGC	4 cut(s)	184, 553, 685, 856
NarI	GGCGCC	1 cut(s)	490
NciI	CCSGG	3 cut(s)	183, 184, 405
NcoI	CCATGG	1 cut(s)	135
NdeI	CATATG	1 cut(s)	388
NdeII	GATC	5 cut(s)	86, 270, 361, 811, 817
NlaIII	CATG	9 cut(s)	35, 139, 361, 520, 560, 578, 583, 877, 895
NlaIV	GGNNCC	2 cut(s)	491, 850
NmuCI	GTSAC	1 cut(s)	787
NsiI	ATGCAT	1 cut(s)	558
PasI	CCCWGGG	1 cut(s)	242
PctI	GAATGC	1 cut(s)	859
PfeI	GAWTC	5 cut(s)	107, 321, 480, 560, 832
PflMI	CCANNNNNTGG	1 cut(s)	909
PfoI	TCCNGGA	1 cut(s)	403
PkrI	GCNGC	7 cut(s)	420, 532, 678, 717, 761, 919, 935
PleI	GAGTC	1 cut(s)	369
PluTI	GGCGCC	1 cut(s)	493
PpsI	GAGTC	1 cut(s)	369
Ppu21I	YACGTR	1 cut(s)	798
Psp124BI	GAGCTC	1 cut(s)	707
Psp6I	CCWGG	1 cut(s)	241
PspEI	GGTNACC	1 cut(s)	787
PspFI	CCCAGC	1 cut(s)	316
PspGI	CCWGG	1 cut(s)	241
PspN4I	GGNNCC	2 cut(s)	491, 850
PspOMI	GGGCCC	1 cut(s)	848
PspPI	GGNCC	4 cut(s)	392, 446, 848, 849
PsuI	RGATCY	2 cut(s)	86, 811
PvuII	CAGCTG	1 cut(s)	679
RsaI	GTAC	3 cut(s)	76, 796, 800
RsaNI	GTAC	3 cut(s)	75, 795, 799
RseI	CAYNNNNRTG	2 cut(s)	573, 896
SacI	GAGCTC	1 cut(s)	707
SatI	GCNGC	7 cut(s)	419, 531, 677, 716, 760, 918, 934
Sau3AI	GATC	5 cut(s)	86, 270, 361, 811, 817
Sau96I	GGNCC	4 cut(s)	392, 446, 848, 849
SchI	GAGTC	1 cut(s)	369
ScrFI	CCNGG	4 cut(s)	183, 184, 243, 405
SduI	GDGCHC	3 cut(s)	194, 707, 852
SfcI	CTRYAG	1 cut(s)	435
SfoI	GGCGCC	1 cut(s)	491
SinI	GGWCC	2 cut(s)	392, 446
SmaI	CCCGGG	1 cut(s)	184
SmiMI	CAYNNNNRTG	2 cut(s)	573, 896
SmlI	CTYRAG	1 cut(s)	396
SmoI	CTYRAG	1 cut(s)	396
SnaBI	TACGTA	1 cut(s)	798
Sse9I	AATT	1 cut(s)	427
SsiI	CCGC	1 cut(s)	187
SspDI	GGCGCC	1 cut(s)	489
SspMI	CTAG	2 cut(s)	534, 804
SstI	GAGCTC	1 cut(s)	707
StyD4I	CCNGG	4 cut(s)	181, 182, 241, 403
StyI	CCWWGG	3 cut(s)	65, 135, 590
TaaI	ACNGT	2 cut(s)	16, 542
TaiI	ACGT	1 cut(s)	800
TaqI	TCGA	1 cut(s)	122
TaqII	GACCGA	1 cut(s)	463
TasI	AATT	1 cut(s)	427
TfiI	GAWTC	5 cut(s)	107, 321, 480, 560, 832
TscAI	CASTG	6 cut(s)	63, 172, 199, 429, 861, 927
TseFI	GTSAC	1 cut(s)	787
TseI	GCWGC	7 cut(s)	418, 530, 676, 715, 759, 917, 933
Tsp45I	GTSAC	1 cut(s)	787
TspDTI	ATGAA	7 cut(s)	48, 456, 563, 573, 666, 671, 845
TspGWI	ACGGA	1 cut(s)	492
TspMI	CCCGGG	1 cut(s)	182
TspRI	CASTG	6 cut(s)	63, 172, 199, 429, 861, 927
Van91I	CCANNNNNTGG	1 cut(s)	909
VpaK11BI	GGWCC	2 cut(s)	392, 446
XapI	RAATTY	1 cut(s)	427
XmaI	CCCGGG	1 cut(s)	182
XspI	CTAG	2 cut(s)	534, 804
Zsp2I	ATGCAT	1 cut(s)	558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.