RLG00000030396

Cell division cycle and apoptosis regulator protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0003969
Physical Location & Seq
Forward (+)
60881819 .. 60883776
1958 bp
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UTR
Exon/CDS
Intron
RLM00000030396

Sequence Viewer

Length: 360 bp
ATGCTGCCCTACCACACAGCCACAGCTTCAACCTTGATGACTTCCATGCTTTCCATCACTTACTGCAGTTACGGTTGGTTTCCAGAAGATGTATCACTTGTCACATCCCTCAACTTGCTGAAGCAGTACTGTGAACTTTGTTTTGCTAGAACTCCAGTCCTTTTCCTTAGTAAGAATGGACTATATGGGCAGGTTGCACTTGCAGCCATGGACTGCCAGTGTCTTGATATTGCAAAGGCTTACTCATCCAGCCTGATAGATGTAGAAAGGGATTATCTTTCAATGGATAAACGATATCCCAGGCTCTTTATACCCTCAAAATTCTGCAAGGCTGTGGCCAAGGGAGAATCTTCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBC1

Protein Analysis

120

Amino Acids

13.31

Weight (kDa)

7.54

Isoelectric Point (pI)

24.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 181
AcoI YGGCCR 1 cut(s) 336
AcsI RAATTY 1 cut(s) 320
AcuI CTGAAG 1 cut(s) 140
AfaI GTAC 1 cut(s) 128
AgsI TTSAA 3 cut(s) 30, 282, 354
AjnI CCWGG 1 cut(s) 299
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
AoxI GGCC 1 cut(s) 336
ApeKI GCWGC 2 cut(s) 4, 203
ApoI RAATTY 1 cut(s) 320
BalI TGGCCA 1 cut(s) 338
BbvI GCAGC 1 cut(s) 215
BccI CCATC 1 cut(s) 62
BciT130I CCWGG 1 cut(s) 301
BfaI CTAG 1 cut(s) 147
BfmI CTRYAG 1 cut(s) 64
BfuAI ACCTGC 1 cut(s) 181
BisI GCNGC 2 cut(s) 5, 204
BlsI GCNGC 2 cut(s) 6, 205
BmcAI AGTACT 1 cut(s) 128
Bme1390I CCNGG 1 cut(s) 301
BmrFI CCNGG 1 cut(s) 301
BpmI CTGGAG 1 cut(s) 138
BsaJI CCNNGG 3 cut(s) 207, 299, 339
Bse1I ACTGG 2 cut(s) 155, 217
BseBI CCWGG 1 cut(s) 301
BseDI CCNNGG 3 cut(s) 207, 299, 339
BseGI GGATG 2 cut(s) 104, 245
BseNI ACTGG 2 cut(s) 155, 217
BseXI GCAGC 1 cut(s) 215
BshFI GGCC 1 cut(s) 338
BsnI GGCC 1 cut(s) 338
Bsp19I CCATGG 1 cut(s) 207
BspANI GGCC 1 cut(s) 338
BspMAI CTGCAG 1 cut(s) 68
BspMI ACCTGC 1 cut(s) 181
BsrI ACTGG 2 cut(s) 155, 217
BssECI CCNNGG 3 cut(s) 207, 299, 339
BssT1I CCWWGG 2 cut(s) 207, 339
Bst2UI CCWGG 1 cut(s) 301
Bst4CI ACNGT 2 cut(s) 74, 131
BstDEI CTNAG 1 cut(s) 167
BstDSI CCRYGG 1 cut(s) 207
BstF5I GGATG 2 cut(s) 104, 245
BstMWI GCNNNNNNNGC 1 cut(s) 203
BstNI CCWGG 1 cut(s) 301
BstSCI CCNGG 1 cut(s) 299
BstSFI CTRYAG 1 cut(s) 64
BstV1I GCAGC 1 cut(s) 215
BsuRI GGCC 1 cut(s) 338
BtgI CCRYGG 1 cut(s) 207
BtsCI GGATG 2 cut(s) 104, 245
BtsIMutI CAGTG 1 cut(s) 224
BveI ACCTGC 1 cut(s) 181
Csp6I GTAC 1 cut(s) 127
CviAII CATG 2 cut(s) 46, 208
CviJI RGCY 8 cut(s) 20, 26, 206, 239, 252, 304, 332, 338
CviKI_1 RGCY 8 cut(s) 20, 26, 206, 239, 252, 304, 332, 338
CviQI GTAC 1 cut(s) 127
DdeI CTNAG 1 cut(s) 167
EaeI YGGCCR 1 cut(s) 336
Eco130I CCWWGG 2 cut(s) 207, 339
Eco32I GATATC 1 cut(s) 296
Eco57I CTGAAG 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 299
EcoRV GATATC 1 cut(s) 296
EcoT14I CCWWGG 2 cut(s) 207, 339
ErhI CCWWGG 2 cut(s) 207, 339
FaeI CATG 2 cut(s) 49, 211
FaiI YATR 5 cut(s) 47, 184, 186, 209, 311
FatI CATG 2 cut(s) 45, 207
Fnu4HI GCNGC 2 cut(s) 5, 204
FokI GGATG 2 cut(s) 91, 232
Fsp4HI GCNGC 2 cut(s) 5, 204
FspBI CTAG 1 cut(s) 147
GluI GCNGC 2 cut(s) 5, 204
GsuI CTGGAG 1 cut(s) 138
HaeIII GGCC 1 cut(s) 338
Hin1II CATG 2 cut(s) 49, 211
HinfI GANTC 1 cut(s) 347
Hpy166II GTNNAC 1 cut(s) 134
Hpy188III TCNNGA 2 cut(s) 83, 224
Hpy8I GTNNAC 1 cut(s) 134
HpyCH4III ACNGT 2 cut(s) 74, 131
HpyCH4V TGCA 5 cut(s) 66, 197, 203, 233, 327
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
HpyF3I CTNAG 1 cut(s) 167
Hsp92II CATG 2 cut(s) 49, 211
LpnPI CCDG 8 cut(s) 96, 168, 176, 230, 262, 266, 286, 313
Lsp1109I GCAGC 1 cut(s) 215
MaeI CTAG 1 cut(s) 147
MaeIII GTNAC 2 cut(s) 68, 100
MboII GAAGA 2 cut(s) 98, 342
MlsI TGGCCA 1 cut(s) 338
MluCI AATT 1 cut(s) 320
MluNI TGGCCA 1 cut(s) 338
MnlI CCTC 2 cut(s) 119, 325
Mox20I TGGCCA 1 cut(s) 338
MscI TGGCCA 1 cut(s) 338
MseI TTAA 1 cut(s) 358
Msp20I TGGCCA 1 cut(s) 338
MspR9I CCNGG 1 cut(s) 301
MvaI CCWGG 1 cut(s) 301
MwoI GCNNNNNNNGC 1 cut(s) 203
NcoI CCATGG 1 cut(s) 207
NlaIII CATG 2 cut(s) 49, 211
NmuCI GTSAC 1 cut(s) 100
PfeI GAWTC 1 cut(s) 347
PkrI GCNGC 2 cut(s) 6, 205
Psp6I CCWGG 1 cut(s) 299
PspGI CCWGG 1 cut(s) 299
PstI CTGCAG 1 cut(s) 68
RsaI GTAC 1 cut(s) 128
RsaNI GTAC 1 cut(s) 127
SaqAI TTAA 1 cut(s) 358
SatI GCNGC 2 cut(s) 5, 204
ScaI AGTACT 1 cut(s) 128
ScrFI CCNGG 1 cut(s) 301
SetI ASST 3 cut(s) 28, 35, 195
SfcI CTRYAG 1 cut(s) 64
Sse9I AATT 1 cut(s) 320
SspMI CTAG 1 cut(s) 147
StyD4I CCNGG 1 cut(s) 299
StyI CCWWGG 2 cut(s) 207, 339
TaaI ACNGT 2 cut(s) 74, 131
TasI AATT 1 cut(s) 320
TatI WGTACW 1 cut(s) 126
TfiI GAWTC 1 cut(s) 347
Tru1I TTAA 1 cut(s) 358
Tru9I TTAA 1 cut(s) 358
TscAI CASTG 1 cut(s) 224
TseFI GTSAC 1 cut(s) 100
TseI GCWGC 2 cut(s) 4, 203
Tsp45I GTSAC 1 cut(s) 100
TspRI CASTG 1 cut(s) 224
XapI RAATTY 1 cut(s) 320
XspI CTAG 1 cut(s) 147
ZrmI AGTACT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.