Rh2BG290700

Cell division cycle and apoptosis regulator protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0003969
Physical Location & Seq
Forward (+)
32465814 .. 32475035
9222 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG290700.1

Sequence Viewer

Length: 372 bp
ATGACGATGGCGGAGCTGAATCTGCTAACCACCTGCACTTTCGTCTTCTTCCTCTCTCGACCCAATTGCGTCTTCTACAGACCAACTCGTTTCCAGAAACGAAGCCCCAATTTGAGTGGTCCATGGAATTCCACTGATGGTGGTGATCCATCAGTTGATGATAGCTCTTTAATTCAAACTGCAATAAGATATGGAAAGGATGTTGCGAAACATGATCTGCATAACCGCAAGAACTGGAATCGTTTTCTTAAGGATGAGCTTGTTGGCAGCTTTACCTTCAACCCTTTGCTGAAAGGATTAATAAATGAATGTCTTCAGTGGTGTGATACCAAGTCTCACAGATTTGATTTTGTACTCATCTTATCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBC1

Protein Analysis

123

Amino Acids

14.19

Weight (kDa)

8.78

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBC1 PF14443 38 - 83 1.2e-11 DBC1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 41
Acc36I ACCTGC 1 cut(s) 41
AciI CCGC 2 cut(s) 11, 226
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 1 cut(s) 127
AcuI CTGAAG 1 cut(s) 299
AfaI GTAC 1 cut(s) 354
AflII CTTAAG 1 cut(s) 248
AgsI TTSAA 2 cut(s) 176, 280
AjuI GAANNNNNNNTTGG 2 cut(s) 56, 88
AluBI AGCT 4 cut(s) 16, 165, 259, 270
AluI AGCT 4 cut(s) 16, 165, 259, 270
Alw26I GTCTC 1 cut(s) 339
AlwI GGATC 1 cut(s) 140
ApeKI GCWGC 1 cut(s) 267
ApoI RAATTY 1 cut(s) 127
AseI ATTAAT 1 cut(s) 299
Asp700I GAANNNNTTC 1 cut(s) 312
AspS9I GGNCC 1 cut(s) 119
AsuHPI GGTGA 1 cut(s) 155
AvaII GGWCC 1 cut(s) 119
BbsI GAAGAC 3 cut(s) 37, 64, 305
BbvI GCAGC 1 cut(s) 279
BccI CCATC 2 cut(s) 131, 157
BcgI CGANNNNNNTGC 2 cut(s) 48, 82
BcoDI GTCTC 1 cut(s) 339
BfmI CTRYAG 1 cut(s) 76
BfrI CTTAAG 1 cut(s) 248
BfuAI ACCTGC 1 cut(s) 41
BisI GCNGC 1 cut(s) 268
BlsI GCNGC 1 cut(s) 269
Bme18I GGWCC 1 cut(s) 119
BmgT120I GGNCC 1 cut(s) 119
BpiI GAAGAC 3 cut(s) 37, 64, 305
BsaJI CCNNGG 1 cut(s) 122
Bse1I ACTGG 1 cut(s) 239
BseDI CCNNGG 1 cut(s) 122
BseGI GGATG 2 cut(s) 205, 259
BseNI ACTGG 1 cut(s) 239
BseXI GCAGC 1 cut(s) 279
BsgI GTGCAG 1 cut(s) 19
BsmAI GTCTC 1 cut(s) 339
Bsp143I GATC 2 cut(s) 145, 214
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 2 cut(s) 11, 226
BspMI ACCTGC 1 cut(s) 41
BspPI GGATC 1 cut(s) 140
BspTI CTTAAG 1 cut(s) 248
BsrI ACTGG 1 cut(s) 239
BssECI CCNNGG 1 cut(s) 122
BssMI GATC 2 cut(s) 145, 214
BssT1I CCWWGG 1 cut(s) 122
BstAFI CTTAAG 1 cut(s) 248
BstDSI CCRYGG 1 cut(s) 122
BstF5I GGATG 2 cut(s) 205, 259
BstKTI GATC 2 cut(s) 148, 217
BstMAI GTCTC 1 cut(s) 339
BstMBI GATC 2 cut(s) 145, 214
BstMWI GCNNNNNNNGC 1 cut(s) 22
BstSFI CTRYAG 1 cut(s) 76
BstV1I GCAGC 1 cut(s) 279
BstV2I GAAGAC 3 cut(s) 37, 64, 305
BtgI CCRYGG 1 cut(s) 122
BtsCI GGATG 2 cut(s) 205, 259
BtsIMutI CAGTG 2 cut(s) 132, 323
BveI ACCTGC 1 cut(s) 41
Cfr13I GGNCC 1 cut(s) 119
CseI GACGC 1 cut(s) 58
Csp6I GTAC 1 cut(s) 353
CspCI CAANNNNNGTGG 2 cut(s) 97, 132
CviAII CATG 2 cut(s) 123, 212
CviJI RGCY 5 cut(s) 16, 105, 165, 259, 270
CviKI_1 RGCY 5 cut(s) 16, 105, 165, 259, 270
CviQI GTAC 1 cut(s) 353
DpnI GATC 2 cut(s) 147, 216
DpnII GATC 2 cut(s) 145, 214
EciI GGCGGA 1 cut(s) 26
Eco130I CCWWGG 1 cut(s) 122
Eco47I GGWCC 1 cut(s) 119
Eco57I CTGAAG 1 cut(s) 299
EcoRI GAATTC 1 cut(s) 127
EcoT14I CCWWGG 1 cut(s) 122
ErhI CCWWGG 1 cut(s) 122
FaeI CATG 2 cut(s) 126, 215
FaiI YATR 4 cut(s) 124, 192, 213, 222
FatI CATG 2 cut(s) 122, 211
Fnu4HI GCNGC 1 cut(s) 268
FokI GGATG 2 cut(s) 212, 266
Fsp4HI GCNGC 1 cut(s) 268
GluI GCNGC 1 cut(s) 268
HgaI GACGC 1 cut(s) 58
Hin1II CATG 2 cut(s) 126, 215
HinfI GANTC 2 cut(s) 19, 238
HphI GGTGA 1 cut(s) 155
Hpy188III TCNNGA 2 cut(s) 57, 94
HpyAV CCTTC 1 cut(s) 286
HpyCH4V TGCA 3 cut(s) 36, 182, 220
HpyF10VI GCNNNNNNNGC 1 cut(s) 22
Hsp92II CATG 2 cut(s) 126, 215
Kzo9I GATC 2 cut(s) 145, 214
LmnI GCTCC 1 cut(s) 13
LpnPI CCDG 3 cut(s) 46, 107, 220
Lsp1109I GCAGC 1 cut(s) 279
MalI GATC 2 cut(s) 147, 216
MboI GATC 2 cut(s) 145, 214
MboII GAAGA 4 cut(s) 37, 40, 64, 305
MfeI CAATTG 1 cut(s) 64
MluCI AATT 4 cut(s) 64, 109, 127, 171
MnlI CCTC 1 cut(s) 62
MroXI GAANNNNTTC 1 cut(s) 312
MseI TTAA 4 cut(s) 170, 249, 299, 370
MspCI CTTAAG 1 cut(s) 248
MunI CAATTG 1 cut(s) 64
MwoI GCNNNNNNNGC 1 cut(s) 22
NcoI CCATGG 1 cut(s) 122
NdeII GATC 2 cut(s) 145, 214
NlaIII CATG 2 cut(s) 126, 215
PaqCI CACCTGC 1 cut(s) 41
PdmI GAANNNNTTC 1 cut(s) 312
PfeI GAWTC 2 cut(s) 19, 238
PkrI GCNGC 1 cut(s) 269
PshBI ATTAAT 1 cut(s) 299
PspPI GGNCC 1 cut(s) 119
RsaI GTAC 1 cut(s) 354
RsaNI GTAC 1 cut(s) 353
SaqAI TTAA 4 cut(s) 170, 249, 299, 370
SatI GCNGC 1 cut(s) 268
Sau3AI GATC 2 cut(s) 145, 214
Sau96I GGNCC 1 cut(s) 119
SetI ASST 6 cut(s) 18, 35, 167, 261, 272, 278
SfcI CTRYAG 1 cut(s) 76
SinI GGWCC 1 cut(s) 119
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
Sse9I AATT 4 cut(s) 64, 109, 127, 171
SsiI CCGC 2 cut(s) 11, 226
StyI CCWWGG 1 cut(s) 122
TaqI TCGA 1 cut(s) 58
TasI AATT 4 cut(s) 64, 109, 127, 171
TatI WGTACW 1 cut(s) 352
TfiI GAWTC 2 cut(s) 19, 238
Tru1I TTAA 4 cut(s) 170, 249, 299, 370
Tru9I TTAA 4 cut(s) 170, 249, 299, 370
TscAI CASTG 2 cut(s) 139, 323
TseI GCWGC 1 cut(s) 267
TspDTI ATGAA 1 cut(s) 321
TspRI CASTG 2 cut(s) 139, 323
Vha464I CTTAAG 1 cut(s) 248
VpaK11BI GGWCC 1 cut(s) 119
VspI ATTAAT 1 cut(s) 299
XapI RAATTY 1 cut(s) 127
XmnI GAANNNNTTC 1 cut(s) 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.