RLG00000002203

Cell division cycle and apoptosis regulator protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0003969
Physical Location & Seq
Reverse (-)
29277472 .. 29278234
763 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002203

Sequence Viewer

Length: 453 bp
ATGAGTGGGATAAGCAAGAATGCTTTAGAGGAGCTGTTATCTGAAAGAAGTTCTGATGATCGCATACCCCTTATATATGCAATATCATTAGGTTTGCCATCCTTCAAACACCGCTCATTCATGACAATTGGTGGTCCATGGAATTCCACTGATGGTGGTGATCCATCAGTTGATGATAGCTCTTTAATTCAAACTGCAATAAGATATGGAAAGGATGTTGCGAGAACTGGAATCATTTTCTTAAGAATTTTAAACCATGAAGGTTTATCCTGCACAAAGGTCGGTGGAAATGAGGATGATATGATGGCTGCTAATGAGTTAAATGCTCACACATCCCTTCAAGATAGTTCAGATGGTATCTACCAGAATCTTGTGACACTCATAAGTGGGTTTGAAACAACAACTGGGGAGCAGGTTTGTTTTTGGAATTTTATATTAAAACTTGGCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBC1

Protein Analysis

151

Amino Acids

16.33

Weight (kDa)

4.68

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBC1 PF14443 36 - 74 6.8e-10 DBC1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 403
AccBSI CCGCTC 1 cut(s) 114
AciI CCGC 1 cut(s) 112
AclWI GGATC 1 cut(s) 155
AcsI RAATTY 3 cut(s) 142, 246, 427
AflII CTTAAG 1 cut(s) 241
AgsI TTSAA 4 cut(s) 106, 191, 341, 395
AluBI AGCT 2 cut(s) 34, 180
AluI AGCT 2 cut(s) 34, 180
AlwI GGATC 1 cut(s) 155
ApeKI GCWGC 1 cut(s) 308
ApoI RAATTY 3 cut(s) 142, 246, 427
AspS9I GGNCC 1 cut(s) 134
AsuHPI GGTGA 1 cut(s) 170
AvaII GGWCC 1 cut(s) 134
BbvI GCAGC 1 cut(s) 295
BccI CCATC 5 cut(s) 106, 146, 172, 298, 347
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BfrI CTTAAG 1 cut(s) 241
BfuAI ACCTGC 1 cut(s) 403
BisI GCNGC 1 cut(s) 309
BlsI GCNGC 1 cut(s) 310
Bme18I GGWCC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 134
BmrI ACTGGG 1 cut(s) 414
BmuI ACTGGG 1 cut(s) 414
BsaJI CCNNGG 1 cut(s) 137
Bse1I ACTGG 2 cut(s) 232, 409
BseDI CCNNGG 1 cut(s) 137
BseGI GGATG 4 cut(s) 98, 220, 301, 332
BseNI ACTGG 2 cut(s) 232, 409
BseRI GAGGAG 1 cut(s) 44
BseXI GCAGC 1 cut(s) 295
BsgI GTGCAG 1 cut(s) 256
BsmI GAATGC 1 cut(s) 25
Bsp143I GATC 2 cut(s) 58, 160
Bsp19I CCATGG 1 cut(s) 137
BspACI CCGC 1 cut(s) 112
BspHI TCATGA 1 cut(s) 120
BspMI ACCTGC 1 cut(s) 403
BspPI GGATC 1 cut(s) 155
BspTI CTTAAG 1 cut(s) 241
BsrBI CCGCTC 1 cut(s) 114
BsrI ACTGG 2 cut(s) 232, 409
BssECI CCNNGG 1 cut(s) 137
BssMI GATC 2 cut(s) 58, 160
BssT1I CCWWGG 1 cut(s) 137
BstAFI CTTAAG 1 cut(s) 241
BstDSI CCRYGG 1 cut(s) 137
BstF5I GGATG 4 cut(s) 98, 220, 301, 332
BstKTI GATC 2 cut(s) 61, 163
BstMBI GATC 2 cut(s) 58, 160
BstV1I GCAGC 1 cut(s) 295
BtgI CCRYGG 1 cut(s) 137
BtsCI GGATG 4 cut(s) 98, 220, 301, 332
BtsIMutI CAGTG 1 cut(s) 147
BveI ACCTGC 1 cut(s) 403
CciI TCATGA 1 cut(s) 120
Cfr13I GGNCC 1 cut(s) 134
CviAII CATG 3 cut(s) 121, 138, 257
CviJI RGCY 3 cut(s) 34, 180, 308
CviKI_1 RGCY 3 cut(s) 34, 180, 308
DpnI GATC 2 cut(s) 60, 162
DpnII GATC 2 cut(s) 58, 160
DraI TTTAAA 1 cut(s) 252
Eco130I CCWWGG 1 cut(s) 137
Eco47I GGWCC 1 cut(s) 134
EcoRI GAATTC 1 cut(s) 142
EcoT14I CCWWGG 1 cut(s) 137
ErhI CCWWGG 1 cut(s) 137
FaeI CATG 3 cut(s) 124, 141, 260
FatI CATG 3 cut(s) 120, 137, 256
Fnu4HI GCNGC 1 cut(s) 309
FokI GGATG 4 cut(s) 85, 227, 308, 319
Fsp4HI GCNGC 1 cut(s) 309
GluI GCNGC 1 cut(s) 309
Hin1II CATG 3 cut(s) 124, 141, 260
HinfI GANTC 2 cut(s) 231, 367
HphI GGTGA 1 cut(s) 170
Hpy188I TCNGA 3 cut(s) 43, 55, 352
Hpy188III TCNNGA 2 cut(s) 121, 341
HpyAV CCTTC 3 cut(s) 112, 254, 347
HpyCH4V TGCA 3 cut(s) 80, 197, 273
Hsp92II CATG 3 cut(s) 124, 141, 260
Kzo9I GATC 2 cut(s) 58, 160
LmnI GCTCC 2 cut(s) 31, 409
LpnPI CCDG 5 cut(s) 213, 283, 377, 390, 398
Lsp1109I GCAGC 1 cut(s) 295
MaeIII GTNAC 1 cut(s) 373
MalI GATC 2 cut(s) 60, 162
MbiI CCGCTC 1 cut(s) 114
MboI GATC 2 cut(s) 58, 160
MfeI CAATTG 1 cut(s) 126
MluCI AATT 5 cut(s) 126, 142, 186, 246, 427
MnlI CCTC 2 cut(s) 22, 286
MseI TTAA 5 cut(s) 185, 242, 251, 320, 437
MspCI CTTAAG 1 cut(s) 241
MunI CAATTG 1 cut(s) 126
Mva1269I GAATGC 1 cut(s) 25
NcoI CCATGG 1 cut(s) 137
NdeII GATC 2 cut(s) 58, 160
NlaIII CATG 3 cut(s) 124, 141, 260
NmuCI GTSAC 1 cut(s) 373
PagI TCATGA 1 cut(s) 120
PctI GAATGC 1 cut(s) 25
PfeI GAWTC 2 cut(s) 231, 367
PkrI GCNGC 1 cut(s) 310
PspPI GGNCC 1 cut(s) 134
SaqAI TTAA 5 cut(s) 185, 242, 251, 320, 437
SatI GCNGC 1 cut(s) 309
Sau3AI GATC 2 cut(s) 58, 160
Sau96I GGNCC 1 cut(s) 134
SetI ASST 6 cut(s) 36, 94, 182, 265, 282, 417
SinI GGWCC 1 cut(s) 134
SmlI CTYRAG 1 cut(s) 241
SmoI CTYRAG 1 cut(s) 241
Sse9I AATT 5 cut(s) 126, 142, 186, 246, 427
SsiI CCGC 1 cut(s) 112
StyI CCWWGG 1 cut(s) 137
TasI AATT 5 cut(s) 126, 142, 186, 246, 427
TfiI GAWTC 2 cut(s) 231, 367
Tru1I TTAA 5 cut(s) 185, 242, 251, 320, 437
Tru9I TTAA 5 cut(s) 185, 242, 251, 320, 437
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 1 cut(s) 373
TseI GCWGC 1 cut(s) 308
Tsp45I GTSAC 1 cut(s) 373
TspDTI ATGAA 2 cut(s) 109, 273
TspRI CASTG 1 cut(s) 154
Vha464I CTTAAG 1 cut(s) 241
VpaK11BI GGWCC 1 cut(s) 134
XapI RAATTY 3 cut(s) 142, 246, 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.