Rh5CG223900

Cell division cycle and apoptosis regulator protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003969
Physical Location & Seq
Forward (+)
22783208 .. 22786238
3031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG223900.1

Sequence Viewer

Length: 561 bp
ATGGGATTGGGCATTTGCTATGCATCAATAGACTTAGAGGGGGTTCTAAGCATCTTCGCGGCAGAGAGATCATGGATCTTTGGGATCAGATTTGCACAAATCTTCGAACCAGTTACTATCAAAGAGCTTGATTACTACACATATCCAATGATCAACAATAGACTCATTAATCCGGCACCATGGGCTGAAGAACCAACAACTAAAATATTGGCTGAAGAACCTGCAATATCAGGAGGTGGGAATATTGTGTGGAATGTGAAGATTATCTTGATGAGTGGGATAAGCAAGAATGTTTCAGAGGAGCTGTCATATGAAAGAAGCTCTGATGATCGCATGCCTCATATCTACAATATCATTAGTGGTCCATGGAATTCCACTGATGTTGGTGATCCATCAGTTGATGATAGCTCTTTAATTCAAACTGCAATAAGATATGGAAAGGATGTTGTGAAACATGATCTGCAGAACTGCAAGAACTGGAATCGTTTTCTTAAGGATGAGCTTGTTGGCAGCTTTACCTTCAACCCTTTGTTGAAAGCATTGATAAATGAATGGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBC1

Protein Analysis

186

Amino Acids

21.02

Weight (kDa)

4.76

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBC1 PF14443 118 - 164 5.4e-12 DBC1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 229
AccB1I GGYRCC 1 cut(s) 175
AccII CGCG 1 cut(s) 59
AciI CCGC 1 cut(s) 59
AclWI GGATC 3 cut(s) 83, 92, 383
AcsI RAATTY 1 cut(s) 370
AcuI CTGAAG 2 cut(s) 207, 234
AflII CTTAAG 1 cut(s) 491
AgsI TTSAA 3 cut(s) 419, 523, 535
AluBI AGCT 6 cut(s) 127, 304, 321, 408, 502, 513
AluI AGCT 6 cut(s) 127, 304, 321, 408, 502, 513
AlwI GGATC 3 cut(s) 83, 92, 383
ApeKI GCWGC 1 cut(s) 510
ApoI RAATTY 1 cut(s) 370
AseI ATTAAT 1 cut(s) 168
AspS9I GGNCC 1 cut(s) 362
AsuHPI GGTGA 1 cut(s) 398
AsuII TTCGAA 1 cut(s) 105
AvaII GGWCC 1 cut(s) 362
BanI GGYRCC 1 cut(s) 175
BbvI GCAGC 1 cut(s) 522
BccI CCATC 1 cut(s) 400
BclI TGATCA 1 cut(s) 150
BfmI CTRYAG 1 cut(s) 461
BfrI CTTAAG 1 cut(s) 491
BfuAI ACCTGC 1 cut(s) 229
BisI GCNGC 2 cut(s) 60, 511
BlsI GCNGC 2 cut(s) 61, 512
Bme18I GGWCC 1 cut(s) 362
BmgT120I GGNCC 1 cut(s) 362
BmiI GGNNCC 1 cut(s) 177
BmsI GCATC 2 cut(s) 32, 60
Bpu14I TTCGAA 1 cut(s) 105
BsaJI CCNNGG 2 cut(s) 179, 365
Bse1I ACTGG 2 cut(s) 110, 482
BseDI CCNNGG 2 cut(s) 179, 365
BseGI GGATG 2 cut(s) 448, 502
BseNI ACTGG 2 cut(s) 110, 482
BseRI GAGGAG 1 cut(s) 314
BseXI GCAGC 1 cut(s) 522
Bsh1236I CGCG 1 cut(s) 59
BshNI GGYRCC 1 cut(s) 175
BsiSI CCGG 1 cut(s) 173
Bsp119I TTCGAA 1 cut(s) 105
Bsp143I GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
Bsp19I CCATGG 2 cut(s) 179, 365
BspACI CCGC 1 cut(s) 59
BspFNI CGCG 1 cut(s) 59
BspLI GGNNCC 1 cut(s) 177
BspMAI CTGCAG 1 cut(s) 465
BspMI ACCTGC 1 cut(s) 229
BspPI GGATC 3 cut(s) 83, 92, 383
BspT104I TTCGAA 1 cut(s) 105
BspT107I GGYRCC 1 cut(s) 175
BspTI CTTAAG 1 cut(s) 491
BsrI ACTGG 2 cut(s) 110, 482
BssECI CCNNGG 2 cut(s) 179, 365
BssMI GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
BssT1I CCWWGG 2 cut(s) 179, 365
BstAFI CTTAAG 1 cut(s) 491
BstBI TTCGAA 1 cut(s) 105
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 2 cut(s) 34, 47
BstDSI CCRYGG 2 cut(s) 179, 365
BstF5I GGATG 2 cut(s) 448, 502
BstFNI CGCG 1 cut(s) 59
BstKTI GATC 7 cut(s) 71, 78, 87, 153, 331, 391, 460
BstMBI GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
BstMWI GCNNNNNNNGC 1 cut(s) 182
BstNSI RCATGY 1 cut(s) 337
BstSFI CTRYAG 1 cut(s) 461
BstUI CGCG 1 cut(s) 59
BstV1I GCAGC 1 cut(s) 522
BstX2I RGATCY 1 cut(s) 75
BstYI RGATCY 1 cut(s) 75
BtgI CCRYGG 2 cut(s) 179, 365
BtsCI GGATG 2 cut(s) 448, 502
BtsIMutI CAGTG 1 cut(s) 375
BveI ACCTGC 1 cut(s) 229
Cac8I GCNNGC 1 cut(s) 335
Cfr13I GGNCC 1 cut(s) 362
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviAII CATG 5 cut(s) 72, 180, 334, 366, 455
CviJI RGCY 9 cut(s) 127, 185, 212, 304, 321, 408, 502, 513, 556
CviKI_1 RGCY 9 cut(s) 127, 185, 212, 304, 321, 408, 502, 513, 556
DdeI CTNAG 2 cut(s) 34, 47
DpnI GATC 7 cut(s) 70, 77, 86, 152, 330, 390, 459
DpnII GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
Eco130I CCWWGG 2 cut(s) 179, 365
Eco47I GGWCC 1 cut(s) 362
Eco57I CTGAAG 2 cut(s) 207, 234
EcoRI GAATTC 1 cut(s) 370
EcoT14I CCWWGG 2 cut(s) 179, 365
EcoT22I ATGCAT 1 cut(s) 25
ErhI CCWWGG 2 cut(s) 179, 365
FaeI CATG 5 cut(s) 75, 183, 337, 369, 458
FalI AAGNNNNNCTT 2 cut(s) 251, 283
FatI CATG 5 cut(s) 71, 179, 333, 365, 454
FauNDI CATATG 1 cut(s) 310
FbaI TGATCA 1 cut(s) 150
Fnu4HI GCNGC 2 cut(s) 60, 511
FokI GGATG 2 cut(s) 455, 509
Fsp4HI GCNGC 2 cut(s) 60, 511
GluI GCNGC 2 cut(s) 60, 511
HapII CCGG 1 cut(s) 173
Hin1II CATG 5 cut(s) 75, 183, 337, 369, 458
HinfI GANTC 2 cut(s) 162, 481
HpaII CCGG 1 cut(s) 173
HphI GGTGA 1 cut(s) 398
Hpy188I TCNGA 3 cut(s) 89, 298, 325
Hpy188III TCNNGA 2 cut(s) 231, 268
HpyAV CCTTC 1 cut(s) 529
HpyCH4V TGCA 6 cut(s) 23, 95, 224, 425, 463, 471
HpyF10VI GCNNNNNNNGC 1 cut(s) 182
HpyF3I CTNAG 2 cut(s) 34, 47
Hsp92II CATG 5 cut(s) 75, 183, 337, 369, 458
Ksp22I TGATCA 1 cut(s) 150
Kzo9I GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
LmnI GCTCC 1 cut(s) 301
LpnPI CCDG 5 cut(s) 123, 186, 216, 234, 463
Lsp1109I GCAGC 1 cut(s) 522
LweI GCATC 2 cut(s) 32, 60
MaeIII GTNAC 1 cut(s) 112
MalI GATC 7 cut(s) 70, 77, 86, 152, 330, 390, 459
MboI GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
MboII GAAGA 5 cut(s) 46, 94, 200, 227, 271
MflI RGATCY 1 cut(s) 75
MluCI AATT 2 cut(s) 370, 414
MlyI GAGTC 1 cut(s) 156
MnlI CCTC 4 cut(s) 31, 227, 292, 348
Mph1103I ATGCAT 1 cut(s) 25
MseI TTAA 3 cut(s) 168, 413, 492
MspCI CTTAAG 1 cut(s) 491
MspI CCGG 1 cut(s) 173
MvnI CGCG 1 cut(s) 59
MwoI GCNNNNNNNGC 1 cut(s) 182
NcoI CCATGG 2 cut(s) 179, 365
NdeI CATATG 1 cut(s) 310
NdeII GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
NlaIII CATG 5 cut(s) 75, 183, 337, 369, 458
NlaIV GGNNCC 1 cut(s) 177
NsiI ATGCAT 1 cut(s) 25
NspI RCATGY 1 cut(s) 337
NspV TTCGAA 1 cut(s) 105
PaeI GCATGC 1 cut(s) 337
PfeI GAWTC 1 cut(s) 481
PkrI GCNGC 2 cut(s) 61, 512
PleI GAGTC 1 cut(s) 156
PpsI GAGTC 1 cut(s) 156
PshBI ATTAAT 1 cut(s) 168
PspN4I GGNNCC 1 cut(s) 177
PspPI GGNCC 1 cut(s) 362
PstI CTGCAG 1 cut(s) 465
PsuI RGATCY 1 cut(s) 75
SaqAI TTAA 3 cut(s) 168, 413, 492
SatI GCNGC 2 cut(s) 60, 511
Sau3AI GATC 7 cut(s) 68, 75, 84, 150, 328, 388, 457
Sau96I GGNCC 1 cut(s) 362
SchI GAGTC 1 cut(s) 156
SetI ASST 9 cut(s) 129, 223, 238, 306, 323, 410, 504, 515, 521
SfaNI GCATC 2 cut(s) 32, 60
SfcI CTRYAG 1 cut(s) 461
SfuI TTCGAA 1 cut(s) 105
SinI GGWCC 1 cut(s) 362
SmlI CTYRAG 1 cut(s) 491
SmoI CTYRAG 1 cut(s) 491
SphI GCATGC 1 cut(s) 337
Sse9I AATT 2 cut(s) 370, 414
SsiI CCGC 1 cut(s) 59
SspI AATATT 2 cut(s) 207, 244
StyI CCWWGG 2 cut(s) 179, 365
TaqI TCGA 1 cut(s) 105
TasI AATT 2 cut(s) 370, 414
TauI GCSGC 1 cut(s) 62
TfiI GAWTC 1 cut(s) 481
Tru1I TTAA 3 cut(s) 168, 413, 492
Tru9I TTAA 3 cut(s) 168, 413, 492
TscAI CASTG 1 cut(s) 382
TseI GCWGC 1 cut(s) 510
TspDTI ATGAA 1 cut(s) 327
TspRI CASTG 1 cut(s) 382
Vha464I CTTAAG 1 cut(s) 491
VpaK11BI GGWCC 1 cut(s) 362
VspI ATTAAT 1 cut(s) 168
XapI RAATTY 1 cut(s) 370
XceI RCATGY 1 cut(s) 337
Zsp2I ATGCAT 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.