No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0458311 RchiOBHm_Chr3g0479821 RchiOBHm_Chr5g0058211 RchiOBHm_Chr7g0218771 |
| rosa_laevigata | RLG00000002203 RLG00000002741 RLG00000010568 RLG00000030396 RLG00000032185 |
| rosa_multiflora | Rmu_sc0020639.1_g000001 Rmu_ssc0000183.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00004630 Rroxscaffold_3G00275310 |
| rosa_rugosa | Rorug02G0651800 Rorug03G0217800 Rorug03G0241500 |
| rosa_samantha | Rh1AG036900 Rh1AG340400 Rh2AG308600 Rh2BG290700 Rh3AG229500 Rh3CG308300 Rh5CG223900 Rh5CG415900 Rh6BG135900 Rh6CG134300 Rh6DG000600 Rh6DG120600 Rh7CG365200 Rh7CG433800 |
| rosa_wichuraiana | Rw1G020130 Rw2G005810 Rw2G007320 Rw2G017470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 124 |
| AclWI | GGATC | 2 cut(s) | 29, 135 |
| AcsI | RAATTY | 1 cut(s) | 30 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 124 |
| AgsI | TTSAA | 1 cut(s) | 160 |
| AluBI | AGCT | 5 cut(s) | 64, 82, 185, 212, 238 |
| AluI | AGCT | 5 cut(s) | 64, 82, 185, 212, 238 |
| Alw21I | GWGCWC | 1 cut(s) | 240 |
| AlwI | GGATC | 2 cut(s) | 29, 135 |
| ApeKI | GCWGC | 4 cut(s) | 185, 200, 209, 272 |
| ApoI | RAATTY | 1 cut(s) | 30 |
| AsuHPI | GGTGA | 1 cut(s) | 232 |
| BanII | GRGCYC | 1 cut(s) | 240 |
| Bbv12I | GWGCWC | 1 cut(s) | 240 |
| BbvI | GCAGC | 4 cut(s) | 172, 187, 221, 259 |
| BccI | CCATC | 1 cut(s) | 118 |
| BfaI | CTAG | 1 cut(s) | 83 |
| BisI | GCNGC | 4 cut(s) | 186, 201, 210, 273 |
| BlsI | GCNGC | 4 cut(s) | 187, 202, 211, 274 |
| BmiI | GGNNCC | 1 cut(s) | 285 |
| BmsI | GCATC | 1 cut(s) | 150 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 227, 259 |
| BsaBI | GATNNNNATC | 1 cut(s) | 140 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 124 |
| Bse8I | GATNNNNATC | 1 cut(s) | 140 |
| BseGI | GGATG | 1 cut(s) | 129 |
| BseJI | GATNNNNATC | 1 cut(s) | 140 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 124 |
| BseXI | GCAGC | 4 cut(s) | 172, 187, 221, 259 |
| BsiHKAI | GWGCWC | 1 cut(s) | 240 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 124 |
| Bsp1286I | GDGCHC | 1 cut(s) | 240 |
| Bsp143I | GATC | 2 cut(s) | 21, 127 |
| BspLI | GGNNCC | 1 cut(s) | 285 |
| BspPI | GGATC | 2 cut(s) | 29, 135 |
| BssMI | GATC | 2 cut(s) | 21, 127 |
| BstC8I | GCNNGC | 1 cut(s) | 226 |
| BstDEI | CTNAG | 1 cut(s) | 246 |
| BstF5I | GGATG | 1 cut(s) | 129 |
| BstKTI | GATC | 2 cut(s) | 24, 130 |
| BstMBI | GATC | 2 cut(s) | 21, 127 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 173, 182, 206, 209, 296 |
| BstV1I | GCAGC | 4 cut(s) | 172, 187, 221, 259 |
| BstX2I | RGATCY | 1 cut(s) | 21 |
| BstYI | RGATCY | 1 cut(s) | 21 |
| BtsCI | GGATG | 1 cut(s) | 129 |
| Cac8I | GCNNGC | 1 cut(s) | 226 |
| DdeI | CTNAG | 1 cut(s) | 246 |
| DpnI | GATC | 2 cut(s) | 23, 129 |
| DpnII | GATC | 2 cut(s) | 21, 127 |
| Ecl136II | GAGCTC | 1 cut(s) | 238 |
| Eco24I | GRGCYC | 1 cut(s) | 240 |
| Eco53kI | GAGCTC | 1 cut(s) | 238 |
| EcoICRI | GAGCTC | 1 cut(s) | 238 |
| EcoT22I | ATGCAT | 1 cut(s) | 143 |
| EcoT38I | GRGCYC | 1 cut(s) | 240 |
| FaiI | YATR | 3 cut(s) | 139, 205, 207 |
| FauNDI | CATATG | 1 cut(s) | 205 |
| Fnu4HI | GCNGC | 4 cut(s) | 186, 201, 210, 273 |
| FokI | GGATG | 1 cut(s) | 136 |
| FriOI | GRGCYC | 1 cut(s) | 240 |
| Fsp4HI | GCNGC | 4 cut(s) | 186, 201, 210, 273 |
| FspBI | CTAG | 1 cut(s) | 83 |
| GluI | GCNGC | 4 cut(s) | 186, 201, 210, 273 |
| HinfI | GANTC | 2 cut(s) | 151, 254 |
| HphI | GGTGA | 1 cut(s) | 232 |
| Hpy188III | TCNNGA | 2 cut(s) | 118, 131 |
| Hpy99I | CGWCG | 1 cut(s) | 173 |
| HpyCH4V | TGCA | 4 cut(s) | 28, 141, 203, 209 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 173, 182, 206, 209, 296 |
| HpyF3I | CTNAG | 1 cut(s) | 246 |
| Kzo9I | GATC | 2 cut(s) | 21, 127 |
| LpnPI | CCDG | 5 cut(s) | 116, 131, 206, 210, 300 |
| Lsp1109I | GCAGC | 4 cut(s) | 172, 187, 221, 259 |
| LweI | GCATC | 1 cut(s) | 150 |
| MaeI | CTAG | 1 cut(s) | 83 |
| MalI | GATC | 2 cut(s) | 23, 129 |
| MboI | GATC | 2 cut(s) | 21, 127 |
| MboII | GAAGA | 1 cut(s) | 62 |
| MflI | RGATCY | 1 cut(s) | 21 |
| MhlI | GDGCHC | 1 cut(s) | 240 |
| MluCI | AATT | 1 cut(s) | 30 |
| MlyI | GAGTC | 1 cut(s) | 263 |
| MmeI | TCCRAC | 1 cut(s) | 231 |
| MnlI | CCTC | 2 cut(s) | 114, 253 |
| Mph1103I | ATGCAT | 1 cut(s) | 143 |
| MseI | TTAA | 2 cut(s) | 6, 71 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 173, 182, 206, 209, 296 |
| NdeI | CATATG | 1 cut(s) | 205 |
| NdeII | GATC | 2 cut(s) | 21, 127 |
| NlaIV | GGNNCC | 1 cut(s) | 285 |
| NsiI | ATGCAT | 1 cut(s) | 143 |
| PfeI | GAWTC | 1 cut(s) | 151 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 124 |
| PkrI | GCNGC | 4 cut(s) | 187, 202, 211, 274 |
| PleI | GAGTC | 1 cut(s) | 262 |
| PpsI | GAGTC | 1 cut(s) | 262 |
| Psp124BI | GAGCTC | 1 cut(s) | 240 |
| PspN4I | GGNNCC | 1 cut(s) | 285 |
| PsuI | RGATCY | 1 cut(s) | 21 |
| SacI | GAGCTC | 1 cut(s) | 240 |
| SaqAI | TTAA | 2 cut(s) | 6, 71 |
| SatI | GCNGC | 4 cut(s) | 186, 201, 210, 273 |
| Sau3AI | GATC | 2 cut(s) | 21, 127 |
| SchI | GAGTC | 1 cut(s) | 263 |
| SduI | GDGCHC | 1 cut(s) | 240 |
| SetI | ASST | 6 cut(s) | 66, 84, 187, 214, 240, 245 |
| SfaNI | GCATC | 1 cut(s) | 150 |
| Sse9I | AATT | 1 cut(s) | 30 |
| SspMI | CTAG | 1 cut(s) | 83 |
| SstI | GAGCTC | 1 cut(s) | 240 |
| TaqI | TCGA | 1 cut(s) | 110 |
| TasI | AATT | 1 cut(s) | 30 |
| TfiI | GAWTC | 1 cut(s) | 151 |
| Tru1I | TTAA | 2 cut(s) | 6, 71 |
| Tru9I | TTAA | 2 cut(s) | 6, 71 |
| TseI | GCWGC | 4 cut(s) | 185, 200, 209, 272 |
| TspDTI | ATGAA | 2 cut(s) | 63, 89 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 124 |
| XapI | RAATTY | 1 cut(s) | 30 |
| XspI | CTAG | 1 cut(s) | 83 |
| Zsp2I | ATGCAT | 1 cut(s) | 143 |