RLG00000010568

Cell division cycle and apoptosis regulator protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0003969
Physical Location & Seq
Reverse (-)
2683265 .. 2685598
2334 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010568

Sequence Viewer

Length: 387 bp
ATGTCTGATTCAGAAATCCCTTCTGCTAGTTCTAAAGGGATTATCTTTCAATGGATAAACGATATCCCAGGCTCTTTATACCCTCAGAATTCTGCAAGGCTGTGGCCAAGGGAGAATCTTCAACTTTCTATCCGGACTCCTGTCAGTTTTGAGCATGATTTTGTGGAAGAAGAGGATGCAACTATAATGAAAGAGCCAACAACTAAAATATTTGCTGAAGAACCTGCAATATCAGGAGGTGGGAATATTGTGTGGAATGTGAAGCGACTTCGTATATGTAATTTTGCTGATGGAGATCTTCAACATCAGTGGTTGTACTGCATGGACATCCAGAGTTTGAGGTTATTGTTTGGAACAAATAAACATTACCGACTGAAAGCACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBC1

Protein Analysis

129

Amino Acids

14.72

Weight (kDa)

5.76

Isoelectric Point (pI)

57.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 232
AccIII TCCGGA 1 cut(s) 132
AcoI YGGCCR 1 cut(s) 104
AcsI RAATTY 1 cut(s) 88
AcuI CTGAAG 1 cut(s) 237
AfaI GTAC 1 cut(s) 317
AgsI TTSAA 3 cut(s) 50, 122, 302
AjnI CCWGG 1 cut(s) 67
Aor13HI TCCGGA 1 cut(s) 132
AoxI GGCC 1 cut(s) 104
ApoI RAATTY 1 cut(s) 88
BalI TGGCCA 1 cut(s) 106
BccI CCATC 1 cut(s) 284
BciT130I CCWGG 1 cut(s) 69
BfaI CTAG 2 cut(s) 27, 385
BfuAI ACCTGC 1 cut(s) 232
BglII AGATCT 1 cut(s) 295
Bme1390I CCNGG 1 cut(s) 69
BmrFI CCNGG 1 cut(s) 69
BmsI GCATC 1 cut(s) 166
BoxI GACNNNNGTC 1 cut(s) 140
BsaBI GATNNNNATC 1 cut(s) 294
BsaJI CCNNGG 2 cut(s) 67, 107
BsaWI WCCGGW 1 cut(s) 132
Bse8I GATNNNNATC 1 cut(s) 294
BseAI TCCGGA 1 cut(s) 132
BseBI CCWGG 1 cut(s) 69
BseDI CCNNGG 2 cut(s) 67, 107
BseGI GGATG 2 cut(s) 181, 327
BseJI GATNNNNATC 1 cut(s) 294
BseMII CTCAG 1 cut(s) 98
BshFI GGCC 1 cut(s) 106
BsiSI CCGG 1 cut(s) 133
BsnI GGCC 1 cut(s) 106
Bsp13I TCCGGA 1 cut(s) 132
Bsp143I GATC 1 cut(s) 295
BspANI GGCC 1 cut(s) 106
BspCNI CTCAG 1 cut(s) 97
BspEI TCCGGA 1 cut(s) 132
BspMI ACCTGC 1 cut(s) 232
BssECI CCNNGG 2 cut(s) 67, 107
BssMI GATC 1 cut(s) 295
BssT1I CCWWGG 1 cut(s) 107
Bst2UI CCWGG 1 cut(s) 69
Bst6I CTCTTC 1 cut(s) 165
BstDEI CTNAG 1 cut(s) 84
BstF5I GGATG 2 cut(s) 181, 327
BstKTI GATC 1 cut(s) 298
BstMBI GATC 1 cut(s) 295
BstNI CCWGG 1 cut(s) 69
BstPAI GACNNNNGTC 1 cut(s) 140
BstSCI CCNGG 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 295
BstYI RGATCY 1 cut(s) 295
BsuRI GGCC 1 cut(s) 106
BtsCI GGATG 2 cut(s) 181, 327
BtsIMutI CAGTG 1 cut(s) 314
BveI ACCTGC 1 cut(s) 232
Csp6I GTAC 1 cut(s) 316
CspCI CAANNNNNGTGG 2 cut(s) 290, 325
CviAII CATG 2 cut(s) 155, 322
CviJI RGCY 4 cut(s) 72, 100, 106, 196
CviKI_1 RGCY 4 cut(s) 72, 100, 106, 196
CviQI GTAC 1 cut(s) 316
DdeI CTNAG 1 cut(s) 84
DpnI GATC 1 cut(s) 297
DpnII GATC 1 cut(s) 295
EaeI YGGCCR 1 cut(s) 104
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Eco130I CCWWGG 1 cut(s) 107
Eco32I GATATC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 237
EcoRI GAATTC 1 cut(s) 88
EcoRII CCWGG 1 cut(s) 67
EcoRV GATATC 1 cut(s) 64
EcoT14I CCWWGG 1 cut(s) 107
ErhI CCWWGG 1 cut(s) 107
FaeI CATG 2 cut(s) 158, 325
FaiI YATR 6 cut(s) 79, 156, 185, 275, 277, 323
FatI CATG 2 cut(s) 154, 321
FokI GGATG 2 cut(s) 188, 314
FspBI CTAG 2 cut(s) 27, 385
HaeIII GGCC 1 cut(s) 106
HapII CCGG 1 cut(s) 133
Hin1II CATG 2 cut(s) 158, 325
HinfI GANTC 3 cut(s) 8, 115, 136
HpaII CCGG 1 cut(s) 133
Hpy188I TCNGA 3 cut(s) 7, 13, 87
Hpy188III TCNNGA 3 cut(s) 133, 234, 331
HpyAV CCTTC 1 cut(s) 30
HpyCH4V TGCA 4 cut(s) 95, 179, 227, 321
HpyF3I CTNAG 1 cut(s) 84
Hsp92II CATG 2 cut(s) 158, 325
Kpn2I TCCGGA 1 cut(s) 132
Kzo9I GATC 1 cut(s) 295
LpnPI CCDG 7 cut(s) 54, 81, 146, 153, 219, 237, 344
LweI GCATC 1 cut(s) 166
MaeI CTAG 2 cut(s) 27, 385
MalI GATC 1 cut(s) 297
MboI GATC 1 cut(s) 295
MboII GAAGA 5 cut(s) 110, 179, 182, 230, 290
MflI RGATCY 1 cut(s) 295
MlsI TGGCCA 1 cut(s) 106
MluCI AATT 2 cut(s) 88, 280
MluNI TGGCCA 1 cut(s) 106
MlyI GAGTC 1 cut(s) 130
MnlI CCTC 4 cut(s) 93, 166, 230, 333
Mox20I TGGCCA 1 cut(s) 106
MroI TCCGGA 1 cut(s) 132
MscI TGGCCA 1 cut(s) 106
Msp20I TGGCCA 1 cut(s) 106
MspI CCGG 1 cut(s) 133
MspR9I CCNGG 1 cut(s) 69
MvaI CCWGG 1 cut(s) 69
NdeII GATC 1 cut(s) 295
NlaIII CATG 2 cut(s) 158, 325
PfeI GAWTC 2 cut(s) 8, 115
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
PshAI GACNNNNGTC 1 cut(s) 140
Psp6I CCWGG 1 cut(s) 67
PspGI CCWGG 1 cut(s) 67
PsuI RGATCY 1 cut(s) 295
RsaI GTAC 1 cut(s) 317
RsaNI GTAC 1 cut(s) 316
Sau3AI GATC 1 cut(s) 295
SchI GAGTC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 69
SetI ASST 3 cut(s) 226, 241, 344
SfaNI GCATC 1 cut(s) 166
Sse9I AATT 2 cut(s) 88, 280
SspI AATATT 2 cut(s) 210, 247
SspMI CTAG 2 cut(s) 27, 385
StyD4I CCNGG 1 cut(s) 67
StyI CCWWGG 1 cut(s) 107
TasI AATT 2 cut(s) 88, 280
TatI WGTACW 1 cut(s) 315
TfiI GAWTC 2 cut(s) 8, 115
TscAI CASTG 1 cut(s) 314
TspDTI ATGAA 1 cut(s) 203
TspRI CASTG 1 cut(s) 314
XapI RAATTY 1 cut(s) 88
XspI CTAG 2 cut(s) 27, 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.