RchiOBHm_Chr3g0458311

Cell division cycle and apoptosis regulator protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
7018249 .. 7019401
1153 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42498

Sequence Viewer

Length: 342 bp
ATGTCTGATTCAGAAATCCCTTCTGCTAGTTCTGCTTACTCATCCAGCCTGATAGATGTAGAAAGGGATTATCTTTCAATGGATAAACGATATCCCAGGCTCTTTATACCCTCAGAATTCTGCAAGGCTGTGGCCAAGGAAGAATCTTCAACTTTCTATCCGGACTCCTGTCAGGTGGAAGAAGAGGGTGCAGCTGTAATGAAAGAGCCAACAACTAAAATATTGGCTGAAGAACCTGCAATATCAGGAGGTGGGAATATTGTGTGGAATGTGAAGGTAGGTTACTTCTTTGACCTTCCTCCTTGCGTTTCCTATTCTTTAAATTGCCCAAAAGTTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.5

Weight (kDa)

4.6

Isoelectric Point (pI)

65.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 244
AccIII TCCGGA 1 cut(s) 160
AcoI YGGCCR 1 cut(s) 132
AcsI RAATTY 1 cut(s) 116
AcuI CTGAAG 1 cut(s) 249
AgsI TTSAA 2 cut(s) 78, 150
AjnI CCWGG 1 cut(s) 95
AluBI AGCT 1 cut(s) 194
AluI AGCT 1 cut(s) 194
Aor13HI TCCGGA 1 cut(s) 160
AoxI GGCC 1 cut(s) 132
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 1 cut(s) 116
BalI TGGCCA 1 cut(s) 134
BarI GAAGNNNNNNTAC 2 cut(s) 266, 298
BbvI GCAGC 1 cut(s) 203
BciT130I CCWGG 1 cut(s) 97
BfaI CTAG 1 cut(s) 27
BfuAI ACCTGC 1 cut(s) 244
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
Bme1390I CCNGG 1 cut(s) 97
BmrFI CCNGG 1 cut(s) 97
BoxI GACNNNNGTC 1 cut(s) 168
BsaJI CCNNGG 2 cut(s) 95, 135
BsaWI WCCGGW 1 cut(s) 160
BseAI TCCGGA 1 cut(s) 160
BseBI CCWGG 1 cut(s) 97
BseDI CCNNGG 2 cut(s) 95, 135
BseGI GGATG 1 cut(s) 41
BseMII CTCAG 1 cut(s) 126
BseXI GCAGC 1 cut(s) 203
BsgI GTGCAG 1 cut(s) 210
BshFI GGCC 1 cut(s) 134
BsiSI CCGG 1 cut(s) 161
BsnI GGCC 1 cut(s) 134
Bsp13I TCCGGA 1 cut(s) 160
BspANI GGCC 1 cut(s) 134
BspCNI CTCAG 1 cut(s) 125
BspEI TCCGGA 1 cut(s) 160
BspMI ACCTGC 1 cut(s) 244
BssECI CCNNGG 2 cut(s) 95, 135
BssT1I CCWWGG 1 cut(s) 135
Bst2UI CCWGG 1 cut(s) 97
Bst6I CTCTTC 1 cut(s) 177
BstDEI CTNAG 1 cut(s) 112
BstF5I GGATG 1 cut(s) 41
BstMWI GCNNNNNNNGC 1 cut(s) 32
BstNI CCWGG 1 cut(s) 97
BstPAI GACNNNNGTC 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 95
BstV1I GCAGC 1 cut(s) 203
BsuRI GGCC 1 cut(s) 134
BtsCI GGATG 1 cut(s) 41
BveI ACCTGC 1 cut(s) 244
CviJI RGCY 7 cut(s) 48, 100, 128, 134, 194, 208, 227
CviKI_1 RGCY 7 cut(s) 48, 100, 128, 134, 194, 208, 227
DdeI CTNAG 1 cut(s) 112
DraI TTTAAA 1 cut(s) 321
EaeI YGGCCR 1 cut(s) 132
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
Eco130I CCWWGG 1 cut(s) 135
Eco32I GATATC 1 cut(s) 92
Eco57I CTGAAG 1 cut(s) 249
EcoRI GAATTC 1 cut(s) 116
EcoRII CCWGG 1 cut(s) 95
EcoRV GATATC 1 cut(s) 92
EcoT14I CCWWGG 1 cut(s) 135
ErhI CCWWGG 1 cut(s) 135
FaiI YATR 1 cut(s) 107
Fnu4HI GCNGC 1 cut(s) 192
FokI GGATG 1 cut(s) 28
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 1 cut(s) 27
GluI GCNGC 1 cut(s) 192
HaeIII GGCC 1 cut(s) 134
HapII CCGG 1 cut(s) 161
HinfI GANTC 3 cut(s) 8, 143, 164
HpaII CCGG 1 cut(s) 161
Hpy188I TCNGA 3 cut(s) 7, 13, 115
Hpy188III TCNNGA 2 cut(s) 161, 246
HpyAV CCTTC 3 cut(s) 30, 268, 305
HpyCH4V TGCA 3 cut(s) 123, 191, 239
HpyF10VI GCNNNNNNNGC 1 cut(s) 32
HpyF3I CTNAG 1 cut(s) 112
Kpn2I TCCGGA 1 cut(s) 160
LpnPI CCDG 9 cut(s) 58, 62, 82, 109, 158, 174, 181, 231, 249
Lsp1109I GCAGC 1 cut(s) 203
MaeI CTAG 1 cut(s) 27
MaeIII GTNAC 1 cut(s) 281
MboII GAAGA 5 cut(s) 138, 152, 191, 194, 242
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 2 cut(s) 116, 322
MluNI TGGCCA 1 cut(s) 134
MlyI GAGTC 1 cut(s) 158
MnlI CCTC 4 cut(s) 121, 178, 242, 309
Mox20I TGGCCA 1 cut(s) 134
MroI TCCGGA 1 cut(s) 160
MscI TGGCCA 1 cut(s) 134
MseI TTAA 1 cut(s) 320
Msp20I TGGCCA 1 cut(s) 134
MspA1I CMGCKG 1 cut(s) 194
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 1 cut(s) 97
MvaI CCWGG 1 cut(s) 97
MwoI GCNNNNNNNGC 1 cut(s) 32
PfeI GAWTC 2 cut(s) 8, 143
PkrI GCNGC 1 cut(s) 193
PleI GAGTC 1 cut(s) 158
PpsI GAGTC 1 cut(s) 158
PshAI GACNNNNGTC 1 cut(s) 168
Psp6I CCWGG 1 cut(s) 95
PspGI CCWGG 1 cut(s) 95
PvuII CAGCTG 1 cut(s) 194
SaqAI TTAA 1 cut(s) 320
SatI GCNGC 1 cut(s) 192
SchI GAGTC 1 cut(s) 158
ScrFI CCNGG 1 cut(s) 97
SetI ASST 8 cut(s) 177, 196, 238, 253, 279, 283, 297, 341
Sse9I AATT 2 cut(s) 116, 322
SspI AATATT 2 cut(s) 222, 259
SspMI CTAG 1 cut(s) 27
StyD4I CCNGG 1 cut(s) 95
StyI CCWWGG 1 cut(s) 135
TasI AATT 2 cut(s) 116, 322
TfiI GAWTC 2 cut(s) 8, 143
Tru1I TTAA 1 cut(s) 320
Tru9I TTAA 1 cut(s) 320
TseI GCWGC 1 cut(s) 191
TspDTI ATGAA 1 cut(s) 215
XapI RAATTY 1 cut(s) 116
XspI CTAG 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.