Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006891

Physical Location & Seq

Genomic Coordinates Forward (+)

78139481 .. 78142194

Gene Structure 2714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00056370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGTCTTCAAATCCAGGATCTGATTCAGAAGAAATACCATCTGGACGGCAGATGATGCTATCTAATGGCCGGAGTGGTACCAATTCCTCCAATAGCAAGGATTATGACCCCAAAAAAGTGGATAGCGTAGCAAAATCTAGTGGTAGTTCAACTCAGGATCCAAGTTCCAAACAAATGGACCTTGGTAGTAAGACTATAGCTGATTCAACCACCACCAGTAGTCGTCCTTCTCCAAGCCCAATGCTACCTGCAAATTCTGAATTTCTAACCAATTCTATCCCCAGCCCTGGCCAACGAAGTCGCAATAACTCTCGTTCTGATAGCTTAGACAGTATCACCGCACCCATAAGGCCTCATACTGGTGGTGACATTCGGTGGGATGCGATCAACATGGTCTCTAAAGGTTCCCAACTCAATCTCAGCCATTTCCGGCTTCTCAAGCGCCTAGGCTATGGAGACATCGGTAGCGTTTATCTGGTAGAACTCCGAGGAACAAGTGCATTTTTTGCGATGAAAGTCATGGACAAGGCATCTCTTGCTAGTAGAAACAAGCTATTGCGAGCACAAACAGAAAGAGAGATACTCGGACTTCTTGACCACCCATTCTTGCCCACTCTCTATTCTTACTTCGAGACTGACAAGTTCTATTGCTTGGTCATGGAGTATTGTAGTGGAGGTAATCTACATTCCCTGCGACAGAAGCAACCTAACAAGCATTTTACAGAGGAAGCTGCACGGTTTTATGCATCACAGGTTTTGTTAGCACTCGAGTATCTGCATATGCTTGGAATCGTGTACAGGGATTTAAAACCAGAAAATGTTCTAGTAAGAGATGAGGGCCATATCATGCTCTCTGACTTTGATCTATCACTCCGCTGTTCTGTGAATCCTACACTAGTCAAGTCTTCATCTGTCCATGTAAGCAATGGTGGTGGTGGTGGTTCCGGGGGCATTTTGGAGGAGGAGTATGCTGTCCAGGGTTGTATGCAGCCATCCAATTTCTTTCCACGCATTTTACCTTCCAAGAAGAGCCGCAAATCTAAATCAGATTTTGGCCTTTCTGCTAATAGCTCCCTCCCGGAATTGATGGCAGAGCCTACAAATGTGCGCTCCATGTCATTTGTTGGAACACATGAATATCTAGCCCCAGAGATTATCCGCGGAGAGGGCCATGGTAGTGCAGTGGACTGGTGGACGTTTGGCATCTTCTTATATGAGCTCTTACATGGAACAACCCCGTTCAAGGGCCATGGAAATCGTGCCACACTTTTTAACGTCGTAGGTCAGCCTCTGAAGTTCCCAGAAACTCCACAAGTAAGTCCTGTTGCACGTAATCTCATTCGAGGGCTCTTGATCAAAGAACCAAATAAGCGAATTGCATACAAAAGGGGTGCCACAGAAATAAAACAACACCCATTTTTTGAGGGTGTGAACTGGGCTCTAGTGAGATGTGCCATGCCCCCTCATGTGCCTGAACCCGTAGACTTTTCACAATATGTTAGCAAGGAGGCCAGCGCTCCTGACAAAAAGATGCCAGACGAGGGAGGTAATAAAAAGGACAGTAACCCTAATGATTCTTCTTATGTAGATTTTGAGTACTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044706 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

534

Amino Acids

58.93

Weight (kDa)

8.38

Isoelectric Point (pI)

52.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	144 - 295	1e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	144 - 293	2.6e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	349 - 474	1.4e-22	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	349 - 462	2.2e-07	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79250 AT1G79250 AT1G79250 AT1G79250
fragaria_vesca	FvH4_3g13780 FvH4_3g13780 FvH4_3g13780
malus_domestica	MD05G1241000.v1.1 MD10G1219300.v1.1
prunus_persica	Prupe.4G124600_v2.0.a1 Prupe.4G124600_v2.0.a1 Prupe.4G124600_v2.0.a1
pyrus_communis	pycom05g21720 pycom10g18490
rosa_chinensis	RchiOBHm_Chr5g0022971
rosa_laevigata	RLG00000032685
rosa_multiflora	Rmu_sc0002675.1_g000004
rosa_roxburghii	Rroxscaffold_1G00056370
rosa_rugosa	Rorug05G0076000 Rorug05G0076100.1 Rorug05G0076200
rosa_samantha	Rh5AG162300 Rh5BG161500 Rh5CG176200 Rh5DG162900
rosa_wichuraiana	Rw5G014620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	256
Acc65I	GGTACC	1 cut(s)	77
AccB1I	GGYRCC	2 cut(s)	77, 1391
AccI	GTMKAC	1 cut(s)	1482
AccII	CGCG	1 cut(s)	1161
AciI	CCGC	5 cut(s)	339, 874, 1033, 1159, 1161
AclWI	GGATC	3 cut(s)	25, 152, 165
AcoI	YGGCCR	2 cut(s)	67, 289
AcsI	RAATTY	2 cut(s)	253, 260
AcuI	CTGAAG	1 cut(s)	1313
AfaI	GTAC	3 cut(s)	79, 797, 1598
AfeI	AGCGCT	1 cut(s)	1516
AfiI	CCNNNNNNNGG	6 cut(s)	287, 359, 1165, 1243, 1244, 1541
AgsI	TTSAA	4 cut(s)	9, 150, 207, 1243
AhlI	ACTAGT	1 cut(s)	895
AjnI	CCWGG	3 cut(s)	13, 286, 975
AluBI	AGCT	6 cut(s)	200, 324, 553, 731, 1071, 1219
AluI	AGCT	6 cut(s)	200, 324, 553, 731, 1071, 1219
Alw21I	GWGCWC	2 cut(s)	565, 1221
Alw26I	GTCTC	3 cut(s)	400, 450, 626
AlwI	GGATC	3 cut(s)	25, 152, 165
AlwNI	CAGNNNCTG	2 cut(s)	20, 1291
Ama87I	CYCGRG	1 cut(s)	767
Aor51HI	AGCGCT	1 cut(s)	1516
AoxI	GGCC	8 cut(s)	67, 289, 350, 838, 1054, 1168, 1246, 1509
ApeKI	GCWGC	2 cut(s)	731, 988
ApoI	RAATTY	2 cut(s)	253, 260
Asp700I	GAANNNNTTC	1 cut(s)	819
Asp718I	GGTACC	1 cut(s)	77
AspA2I	CCTAGG	1 cut(s)	445
AspLEI	GCGC	3 cut(s)	444, 1110, 1517
AspS9I	GGNCC	4 cut(s)	178, 838, 1168, 1246
AsuC2I	CCSGG	2 cut(s)	946, 1079
AsuHPI	GGTGA	2 cut(s)	328, 377
AvaI	CYCGRG	1 cut(s)	767
AvaII	GGWCC	1 cut(s)	178
AvrII	CCTAGG	1 cut(s)	445
BaeI	ACNNNNGTAYC	2 cut(s)	755, 788
BalI	TGGCCA	1 cut(s)	291
BamHI	GGATCC	1 cut(s)	157
BanI	GGYRCC	2 cut(s)	77, 1391
BanII	GRGCYC	3 cut(s)	1221, 1350, 1441
BarI	GAAGNNNNNNTAC	2 cut(s)	211, 243
BbsI	GAAGAC	1 cut(s)	897
Bbv12I	GWGCWC	2 cut(s)	565, 1221
BbvI	GCAGC	2 cut(s)	718, 1000
BccI	CCATC	3 cut(s)	46, 1000, 1081
BceAI	ACGGC	1 cut(s)	62
BciT130I	CCWGG	3 cut(s)	15, 288, 977
BclI	TGATCA	1 cut(s)	1353
BcnI	CCSGG	2 cut(s)	946, 1079
BcoDI	GTCTC	3 cut(s)	400, 450, 626
BcuI	ACTAGT	1 cut(s)	895
BfaI	CTAG	7 cut(s)	138, 446, 540, 824, 896, 1142, 1442
BfmI	CTRYAG	1 cut(s)	195
BfoI	RGCGCY	2 cut(s)	445, 1518
BfuAI	ACCTGC	1 cut(s)	256
BisI	GCNGC	3 cut(s)	732, 989, 1033
BlnI	CCTAGG	1 cut(s)	445
BlsI	GCNGC	3 cut(s)	733, 990, 1034
BmcAI	AGTACT	1 cut(s)	1598
Bme1390I	CCNGG	5 cut(s)	15, 288, 946, 977, 1079
Bme18I	GGWCC	1 cut(s)	178
BmeT110I	CYCGRG	1 cut(s)	767
BmgT120I	GGNCC	4 cut(s)	178, 838, 1168, 1246
BmiI	GGNNCC	5 cut(s)	79, 159, 406, 943, 1393
BmrFI	CCNGG	5 cut(s)	15, 288, 946, 977, 1079
BmrI	ACTGGG	1 cut(s)	1444
BmsI	GCATC	6 cut(s)	45, 370, 539, 755, 1212, 1521
BmuI	ACTGGG	1 cut(s)	1444
BpiI	GAAGAC	1 cut(s)	897
BplI	GAGNNNNNCTC	2 cut(s)	567, 599
BpuEI	CTTGAG	1 cut(s)	422
BpuMI	CCSGG	2 cut(s)	946, 1079
BsaAI	YACGTR	1 cut(s)	1331
BsaI	GGTCTC	1 cut(s)	400
BsaJI	CCNNGG	9 cut(s)	181, 286, 445, 487, 945, 976, 1159, 1171, 1249
BsaXI	ACNNNNNCTCC	2 cut(s)	950, 980
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 359, 1165, 1243, 1244, 1541
Bse1I	ACTGG	4 cut(s)	216, 364, 1193, 1439
Bse3DI	GCAATG	1 cut(s)	931
BseBI	CCWGG	3 cut(s)	15, 288, 977
BseDI	CCNNGG	9 cut(s)	181, 286, 445, 487, 945, 976, 1159, 1171, 1249
BseGI	GGATG	2 cut(s)	385, 992
BseLI	CCNNNNNNNGG	6 cut(s)	287, 359, 1165, 1243, 1244, 1541
BseMI	GCAATG	1 cut(s)	931
BseMII	CTCAG	2 cut(s)	167, 433
BseNI	ACTGG	4 cut(s)	216, 364, 1193, 1439
BseRI	GAGGAG	2 cut(s)	974, 977
BseXI	GCAGC	2 cut(s)	718, 1000
BseYI	CCCAGC	1 cut(s)	281
BsgI	GTGCAG	2 cut(s)	717, 1200
Bsh1236I	CGCG	1 cut(s)	1161
BshFI	GGCC	8 cut(s)	69, 291, 352, 840, 1056, 1170, 1248, 1511
BshNI	GGYRCC	2 cut(s)	77, 1391
BsiHKAI	GWGCWC	2 cut(s)	565, 1221
BsiHKCI	CYCGRG	1 cut(s)	767
BsiSI	CCGG	4 cut(s)	70, 430, 945, 1079
BslI	CCNNNNNNNGG	6 cut(s)	287, 359, 1165, 1243, 1244, 1541
BsmAI	GTCTC	3 cut(s)	400, 450, 626
BsnI	GGCC	8 cut(s)	69, 291, 352, 840, 1056, 1170, 1248, 1511
Bso31I	GGTCTC	1 cut(s)	400
BsoBI	CYCGRG	1 cut(s)	767
Bsp1286I	GDGCHC	4 cut(s)	565, 1221, 1350, 1441
Bsp1407I	TGTACA	1 cut(s)	795
Bsp143I	GATC	5 cut(s)	17, 157, 384, 862, 1353
Bsp19I	CCATGG	2 cut(s)	1171, 1249
BspACI	CCGC	5 cut(s)	339, 874, 1033, 1159, 1161
BspANI	GGCC	8 cut(s)	69, 291, 352, 840, 1056, 1170, 1248, 1511
BspCNI	CTCAG	2 cut(s)	166, 432
BspFNI	CGCG	1 cut(s)	1161
BspLI	GGNNCC	5 cut(s)	79, 159, 406, 943, 1393
BspMI	ACCTGC	1 cut(s)	256
BspPI	GGATC	3 cut(s)	25, 152, 165
BspQI	GCTCTTC	1 cut(s)	1022
BspT107I	GGYRCC	2 cut(s)	77, 1391
BspTNI	GGTCTC	1 cut(s)	400
BsrDI	GCAATG	1 cut(s)	931
BsrGI	TGTACA	1 cut(s)	795
BsrI	ACTGG	4 cut(s)	216, 364, 1193, 1439
BssECI	CCNNGG	9 cut(s)	181, 286, 445, 487, 945, 976, 1159, 1171, 1249
BssMI	GATC	5 cut(s)	17, 157, 384, 862, 1353
BssT1I	CCWWGG	4 cut(s)	181, 445, 1171, 1249
Bst2UI	CCWGG	3 cut(s)	15, 288, 977
Bst4CI	ACNGT	3 cut(s)	332, 738, 1562
Bst6I	CTCTTC	1 cut(s)	1022
BstAPI	GCANNNNNTGC	3 cut(s)	55, 506, 536
BstAUI	TGTACA	1 cut(s)	795
BstBAI	YACGTR	1 cut(s)	1331
BstC8I	GCNNGC	2 cut(s)	561, 1513
BstDEI	CTNAG	3 cut(s)	153, 325, 419
BstDSI	CCRYGG	3 cut(s)	1159, 1171, 1249
BstF5I	GGATG	2 cut(s)	385, 992
BstFNI	CGCG	1 cut(s)	1161
BstH2I	RGCGCY	2 cut(s)	445, 1518
BstHHI	GCGC	3 cut(s)	444, 1110, 1517
BstKTI	GATC	5 cut(s)	20, 160, 387, 865, 1356
BstMAI	GTCTC	3 cut(s)	400, 450, 626
BstMBI	GATC	5 cut(s)	17, 157, 384, 862, 1353
BstMWI	GCNNNNNNNGC	6 cut(s)	55, 439, 506, 536, 700, 1167
BstNI	CCWGG	3 cut(s)	15, 288, 977
BstSCI	CCNGG	5 cut(s)	13, 286, 944, 975, 1077
BstSFI	CTRYAG	1 cut(s)	195
BstUI	CGCG	1 cut(s)	1161
BstV1I	GCAGC	2 cut(s)	718, 1000
BstV2I	GAAGAC	1 cut(s)	897
BstX2I	RGATCY	2 cut(s)	17, 157
BstXI	CCANNNNNNTGG	2 cut(s)	118, 175
BstYI	RGATCY	2 cut(s)	17, 157
BsuRI	GGCC	8 cut(s)	69, 291, 352, 840, 1056, 1170, 1248, 1511
BtgI	CCRYGG	3 cut(s)	1159, 1171, 1249
BtgZI	GCGATG	1 cut(s)	524
BtsCI	GGATG	2 cut(s)	385, 992
BtsI	GCAGTG	1 cut(s)	1188
BtsIMutI	CAGTG	1 cut(s)	1188
BveI	ACCTGC	1 cut(s)	256
Cac8I	GCNNGC	2 cut(s)	561, 1513
CaiI	CAGNNNCTG	2 cut(s)	20, 1291
CfoI	GCGC	3 cut(s)	444, 1110, 1517
Cfr13I	GGNCC	4 cut(s)	178, 838, 1168, 1246
Cfr42I	CCGCGG	1 cut(s)	1162
Csp6I	GTAC	3 cut(s)	78, 796, 1597
CspCI	CAANNNNNGTGG	2 cut(s)	913, 948
CviQI	GTAC	3 cut(s)	78, 796, 1597
DdeI	CTNAG	3 cut(s)	153, 325, 419
DpnI	GATC	5 cut(s)	19, 159, 386, 864, 1355
DpnII	GATC	5 cut(s)	17, 157, 384, 862, 1353
DraI	TTTAAA	1 cut(s)	807
EaeI	YGGCCR	2 cut(s)	67, 289
Eam1104I	CTCTTC	1 cut(s)	1022
EarI	CTCTTC	1 cut(s)	1022
Ecl136II	GAGCTC	1 cut(s)	1219
Eco130I	CCWWGG	4 cut(s)	181, 445, 1171, 1249
Eco147I	AGGCCT	1 cut(s)	352
Eco24I	GRGCYC	3 cut(s)	1221, 1350, 1441
Eco31I	GGTCTC	1 cut(s)	400
Eco47I	GGWCC	1 cut(s)	178
Eco47III	AGCGCT	1 cut(s)	1516
Eco53kI	GAGCTC	1 cut(s)	1219
Eco57I	CTGAAG	1 cut(s)	1313
Eco88I	CYCGRG	1 cut(s)	767
EcoICRI	GAGCTC	1 cut(s)	1219
EcoRII	CCWGG	3 cut(s)	13, 286, 975
EcoT14I	CCWWGG	4 cut(s)	181, 445, 1171, 1249
EcoT22I	ATGCAT	1 cut(s)	748
EcoT38I	GRGCYC	3 cut(s)	1221, 1350, 1441
ErhI	CCWWGG	4 cut(s)	181, 445, 1171, 1249
FauNDI	CATATG	1 cut(s)	780
FbaI	TGATCA	1 cut(s)	1353
FblI	GTMKAC	1 cut(s)	1482
Fnu4HI	GCNGC	3 cut(s)	732, 989, 1033
FokI	GGATG	2 cut(s)	392, 979
FriOI	GRGCYC	3 cut(s)	1221, 1350, 1441
Fsp4HI	GCNGC	3 cut(s)	732, 989, 1033
FspBI	CTAG	7 cut(s)	138, 446, 540, 824, 896, 1142, 1442
GlaI	GCGC	3 cut(s)	443, 1109, 1516
GluI	GCNGC	3 cut(s)	732, 989, 1033
GsaI	CCCAGC	1 cut(s)	285
HaeII	RGCGCY	2 cut(s)	445, 1518
HaeIII	GGCC	8 cut(s)	69, 291, 352, 840, 1056, 1170, 1248, 1511
HapII	CCGG	4 cut(s)	70, 430, 945, 1079
HhaI	GCGC	3 cut(s)	444, 1110, 1517
Hin6I	GCGC	3 cut(s)	442, 1108, 1515
HinP1I	GCGC	3 cut(s)	442, 1108, 1515
HinfI	GANTC	5 cut(s)	23, 203, 789, 886, 1574
HpaII	CCGG	4 cut(s)	70, 430, 945, 1079
HphI	GGTGA	2 cut(s)	328, 377
Hpy166II	GTNNAC	5 cut(s)	796, 1186, 1194, 1432, 1483
Hpy188I	TCNGA	9 cut(s)	22, 28, 259, 319, 488, 587, 856, 1048, 1293
Hpy188III	TCNNGA	6 cut(s)	42, 155, 593, 631, 1351, 1520
Hpy8I	GTNNAC	5 cut(s)	796, 1186, 1194, 1432, 1483
Hpy99I	CGWCG	1 cut(s)	1280
HpyAV	CCTTC	2 cut(s)	237, 1029
HpyCH4III	ACNGT	3 cut(s)	332, 738, 1562
HpyCH4IV	ACGT	3 cut(s)	1196, 1275, 1330
HpyCH4V	TGCA	9 cut(s)	251, 500, 734, 746, 778, 988, 1181, 1328, 1379
HpyF10VI	GCNNNNNNNGC	6 cut(s)	55, 439, 506, 536, 700, 1167
HpyF3I	CTNAG	3 cut(s)	153, 325, 419
HpySE526I	ACGT	3 cut(s)	1196, 1275, 1330
HspAI	GCGC	3 cut(s)	442, 1108, 1515
KpnI	GGTACC	1 cut(s)	81
Ksp22I	TGATCA	1 cut(s)	1353
KspI	CCGCGG	1 cut(s)	1162
Kzo9I	GATC	5 cut(s)	17, 157, 384, 862, 1353
LguI	GCTCTTC	1 cut(s)	1022
LmnI	GCTCC	3 cut(s)	1076, 1115, 1522
Lsp1109I	GCAGC	2 cut(s)	718, 1000
LweI	GCATC	6 cut(s)	45, 370, 539, 755, 1212, 1521
MaeI	CTAG	7 cut(s)	138, 446, 540, 824, 896, 1142, 1442
MaeII	ACGT	3 cut(s)	1196, 1275, 1330
MaeIII	GTNAC	2 cut(s)	365, 1562
MalI	GATC	5 cut(s)	19, 159, 386, 864, 1355
MboI	GATC	5 cut(s)	17, 157, 384, 862, 1353
MboII	GAAGA	5 cut(s)	41, 897, 1039, 1198, 1569
MflI	RGATCY	2 cut(s)	17, 157
MhlI	GDGCHC	4 cut(s)	565, 1221, 1350, 1441
MlsI	TGGCCA	1 cut(s)	291
MluCI	AATT	7 cut(s)	82, 253, 260, 271, 997, 1082, 1374
MluNI	TGGCCA	1 cut(s)	291
MmeI	TCCRAC	1 cut(s)	1105
Mox20I	TGGCCA	1 cut(s)	291
Mph1103I	ATGCAT	1 cut(s)	748
MroXI	GAANNNNTTC	1 cut(s)	819
MscI	TGGCCA	1 cut(s)	291
MseI	TTAA	2 cut(s)	806, 1272
MslI	CAYNNNNRTG	2 cut(s)	360, 1176
Msp20I	TGGCCA	1 cut(s)	291
MspA1I	CMGCKG	2 cut(s)	876, 1161
MspI	CCGG	4 cut(s)	70, 430, 945, 1079
MspR9I	CCNGG	5 cut(s)	15, 288, 946, 977, 1079
MvaI	CCWGG	3 cut(s)	15, 288, 977
MvnI	CGCG	1 cut(s)	1161
MwoI	GCNNNNNNNGC	6 cut(s)	55, 439, 506, 536, 700, 1167
NciI	CCSGG	2 cut(s)	946, 1079
NcoI	CCATGG	2 cut(s)	1171, 1249
NdeI	CATATG	1 cut(s)	780
NdeII	GATC	5 cut(s)	17, 157, 384, 862, 1353
NlaIV	GGNNCC	5 cut(s)	79, 159, 406, 943, 1393
NmuCI	GTSAC	1 cut(s)	365
NsiI	ATGCAT	1 cut(s)	748
PaeR7I	CTCGAG	1 cut(s)	767
PceI	AGGCCT	1 cut(s)	352
PciSI	GCTCTTC	1 cut(s)	1022
PdmI	GAANNNNTTC	1 cut(s)	819
PfeI	GAWTC	5 cut(s)	23, 203, 789, 886, 1574
PfoI	TCCNGGA	2 cut(s)	13, 1077
PkrI	GCNGC	3 cut(s)	733, 990, 1034
Ppu21I	YACGTR	1 cut(s)	1331
Psp124BI	GAGCTC	1 cut(s)	1221
Psp6I	CCWGG	3 cut(s)	13, 286, 975
PspFI	CCCAGC	1 cut(s)	281
PspGI	CCWGG	3 cut(s)	13, 286, 975
PspN4I	GGNNCC	5 cut(s)	79, 159, 406, 943, 1393
PspPI	GGNCC	4 cut(s)	178, 838, 1168, 1246
PspXI	VCTCGAGB	1 cut(s)	767
PstNI	CAGNNNCTG	2 cut(s)	20, 1291
PsuI	RGATCY	2 cut(s)	17, 157
RsaI	GTAC	3 cut(s)	79, 797, 1598
RsaNI	GTAC	3 cut(s)	78, 796, 1597
RseI	CAYNNNNRTG	2 cut(s)	360, 1176
SacI	GAGCTC	1 cut(s)	1221
SacII	CCGCGG	1 cut(s)	1162
SapI	GCTCTTC	1 cut(s)	1022
SaqAI	TTAA	2 cut(s)	806, 1272
SatI	GCNGC	3 cut(s)	732, 989, 1033
Sau3AI	GATC	5 cut(s)	17, 157, 384, 862, 1353
Sau96I	GGNCC	4 cut(s)	178, 838, 1168, 1246
ScaI	AGTACT	1 cut(s)	1598
ScrFI	CCNGG	5 cut(s)	15, 288, 946, 977, 1079
SduI	GDGCHC	4 cut(s)	565, 1221, 1350, 1441
SfaNI	GCATC	6 cut(s)	45, 370, 539, 755, 1212, 1521
SfcI	CTRYAG	1 cut(s)	195
Sfr274I	CTCGAG	1 cut(s)	767
Sfr303I	CCGCGG	1 cut(s)	1162
SgrBI	CCGCGG	1 cut(s)	1162
SinI	GGWCC	1 cut(s)	178
SlaI	CTCGAG	1 cut(s)	767
SmiMI	CAYNNNNRTG	2 cut(s)	360, 1176
SmlI	CTYRAG	2 cut(s)	437, 767
SmoI	CTYRAG	2 cut(s)	437, 767
SpeI	ACTAGT	1 cut(s)	895
Sse9I	AATT	7 cut(s)	82, 253, 260, 271, 997, 1082, 1374
SseBI	AGGCCT	1 cut(s)	352
SsiI	CCGC	5 cut(s)	339, 874, 1033, 1159, 1161
SspMI	CTAG	7 cut(s)	138, 446, 540, 824, 896, 1142, 1442
SstI	GAGCTC	1 cut(s)	1221
StuI	AGGCCT	1 cut(s)	352
StyD4I	CCNGG	5 cut(s)	13, 286, 944, 975, 1077
StyI	CCWWGG	4 cut(s)	181, 445, 1171, 1249
TaaI	ACNGT	3 cut(s)	332, 738, 1562
TaiI	ACGT	3 cut(s)	1199, 1278, 1333
TaqI	TCGA	3 cut(s)	630, 768, 1342
TasI	AATT	7 cut(s)	82, 253, 260, 271, 997, 1082, 1374
TatI	WGTACW	2 cut(s)	795, 1596
TauI	GCSGC	1 cut(s)	1035
TfiI	GAWTC	5 cut(s)	23, 203, 789, 886, 1574
Tru1I	TTAA	2 cut(s)	806, 1272
Tru9I	TTAA	2 cut(s)	806, 1272
TscAI	CASTG	1 cut(s)	1188
TseFI	GTSAC	1 cut(s)	365
TseI	GCWGC	2 cut(s)	731, 988
Tsp45I	GTSAC	1 cut(s)	365
TspDTI	ATGAA	3 cut(s)	527, 897, 1149
TspRI	CASTG	1 cut(s)	1188
VpaK11BI	GGWCC	1 cut(s)	178
XapI	RAATTY	2 cut(s)	253, 260
XcmI	CCANNNNNNNNNTGG	1 cut(s)	923
XhoI	CTCGAG	1 cut(s)	767
XmaJI	CCTAGG	1 cut(s)	445
XmiI	GTMKAC	1 cut(s)	1482
XmnI	GAANNNNTTC	1 cut(s)	819
XspI	CTAG	7 cut(s)	138, 446, 540, 824, 896, 1142, 1442
ZrmI	AGTACT	1 cut(s)	1598
Zsp2I	ATGCAT	1 cut(s)	748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.