Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006891

Physical Location & Seq

Genomic Coordinates Reverse (-)

17007313 .. 17011299

Gene Structure 3987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG162900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGCAGTCAGAAGAAATACCATCTGGACGACAGATGATGGTATCTAATGGCCGGAGTGGTACCAATTCCTCCAATAGCAAGGATTATGACCCCAAAAAAGTGGATAGCGTAGAAAAATCTAGTGGTAGTTCAACTCAGGATCCAAGTTCAAAACAAATGGACCTTGGTAGTAAGACTATAGCTGAATCAACCACCACCAGTAGTCGTCCTTCTCCAAGCCCAATGCTACCTGCAAAATCTGAATTTCTAACCAATTCTATCCCCAGCCCTGGCCAACGAAGTCGCAATAACTCTCGTTCTGATAGCTTAGACAGTATCACCGCACCCATAAGGCCTCATACTGGTGGTGACATTCGGTGGGATGCAATCAACATGGTCTCTAAAGGTTCCCAACTCAATCTCAGCCATTTCCGGCTTCTCAAGCGCCTAGGCTATGGAGACATCGGTAGCGTTTATCTGGTAGAACTCCGAGGAACAAGTGCATTTTTTGCCATGAAAGTCATGGACAAGGCATCTCTTGCTAGTAGAAACAAGCTATTGCGAGCACAAACAGAAAGAGAGATACTCGGACTTCTTGACCACCCATTCTTGCCCACTCTCTATTCTTACTTCGAGACTGACAAGTTCTATTGCTTGGTCATGGAGTATTGTAGTGGAGGTAATCTACATTCCCTGCGACAGAAGCAACCTAACAAGCATTTTACAGAGGAAGCTGCACGGTTTTATGCATCACAGGTTTTGTTAGCGCTCGAGTATCTGCATATGCTTGGAATCGTGTACAGGGATTTAAAACCAGAAAATGTTCTAGTAAGAGATGAGGGCCATATCATGCTCTCTGACTTTGATCTATCACTCCGCTGTTCTGTGAATCCTACACTAGTCAAGTCTTCATCTGTCCATGTAAGCAATGGTGGTGGTGGTGGTGGTGGTTCTGGGGGAATTTTGGAGGAGGAGTATGCTGTCCAGGGTTGTATGCAGCCATCCAATTTCTTTCCACGCATTTTACCTTCCAAGAAGAGCCGCAAATCTAAATCAGATTTTGGCCTTTCTGCTAATAACTCCCTCCCGGAACTGATGGCAGAGCCTACAAATGTGCGCTCCATGTCATTTGTCGGAACACATGAATATCTAGCCCCAGAGATTATCCGCGGAGAGGGCCATGGTAGTGCAGTGGACTGGTGGACGTTTGGCATCTTCTTATATGAGCTCTTACATGGAACAACCCCGTTCAAGGGCCACGGAAATCGTGCCACACTTTTTAACGTCGTAGGTCAGCCTCTGAAGTTCCCAGAAACTCCACAAGTAAGTCCTGTTGCACGTAATCTCATTCGAGGGCTCTTGATCAAAGAACCAAATAAGCGAATTGCATACAAAAGGGGTGCCACAGAAATAAAACAACACCCATTTTTTGAGGGAGTGAACTGGGCTCTAGTGAGATGTGCCATGCCCCCTCATGTGCCTGAACCCGTAGACTTTTCACAATATGTTAGCAAGGAGGCAAGCGCTCCTGACAAAAAGATGCCAGACGAGGGGGGTAATAAAAAGGACAGTAACCCTAATGATTCTTCTTATGTAGATTTTGAGTACTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044706 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

530

Amino Acids

58.62

Weight (kDa)

8.56

Isoelectric Point (pI)

51.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	138 - 289	9.9e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	138 - 287	2.6e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	345 - 470	1.8e-22	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	345 - 458	2.4e-07	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79250 AT1G79250 AT1G79250 AT1G79250
fragaria_vesca	FvH4_3g13780 FvH4_3g13780 FvH4_3g13780
malus_domestica	MD05G1241000.v1.1 MD10G1219300.v1.1
prunus_persica	Prupe.4G124600_v2.0.a1 Prupe.4G124600_v2.0.a1 Prupe.4G124600_v2.0.a1
pyrus_communis	pycom05g21720 pycom10g18490
rosa_chinensis	RchiOBHm_Chr5g0022971
rosa_laevigata	RLG00000032685
rosa_multiflora	Rmu_sc0002675.1_g000004
rosa_roxburghii	Rroxscaffold_1G00056370
rosa_rugosa	Rorug05G0076000 Rorug05G0076100.1 Rorug05G0076200
rosa_samantha	Rh5AG162300 Rh5BG161500 Rh5CG176200 Rh5DG162900
rosa_wichuraiana	Rw5G014620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	238
Acc65I	GGTACC	1 cut(s)	59
AccB1I	GGYRCC	2 cut(s)	59, 1379
AccI	GTMKAC	1 cut(s)	1470
AccII	CGCG	1 cut(s)	1149
AciI	CCGC	5 cut(s)	321, 856, 1021, 1147, 1149
AclWI	GGATC	2 cut(s)	134, 147
AcoI	YGGCCR	2 cut(s)	49, 271
AcsI	RAATTY	2 cut(s)	242, 939
AcuI	CTGAAG	1 cut(s)	1301
AfaI	GTAC	3 cut(s)	61, 779, 1586
AfeI	AGCGCT	2 cut(s)	747, 1504
AfiI	CCNNNNNNNGG	6 cut(s)	269, 341, 1153, 1231, 1232, 1529
AgsI	TTSAA	3 cut(s)	132, 150, 1231
AhlI	ACTAGT	1 cut(s)	877
AjnI	CCWGG	2 cut(s)	268, 963
AluBI	AGCT	5 cut(s)	182, 306, 535, 713, 1207
AluI	AGCT	5 cut(s)	182, 306, 535, 713, 1207
Alw21I	GWGCWC	2 cut(s)	547, 1209
Alw26I	GTCTC	3 cut(s)	382, 432, 608
AlwI	GGATC	2 cut(s)	134, 147
AlwNI	CAGNNNCTG	1 cut(s)	1279
Ama87I	CYCGRG	1 cut(s)	749
Aor51HI	AGCGCT	2 cut(s)	747, 1504
AoxI	GGCC	7 cut(s)	49, 271, 332, 820, 1042, 1156, 1234
ApeKI	GCWGC	2 cut(s)	713, 976
ApoI	RAATTY	2 cut(s)	242, 939
Asp700I	GAANNNNTTC	1 cut(s)	801
Asp718I	GGTACC	1 cut(s)	59
AspA2I	CCTAGG	1 cut(s)	427
AspLEI	GCGC	4 cut(s)	426, 748, 1098, 1505
AspS9I	GGNCC	4 cut(s)	160, 820, 1156, 1234
AsuC2I	CCSGG	1 cut(s)	1067
AsuHPI	GGTGA	2 cut(s)	310, 359
AvaI	CYCGRG	1 cut(s)	749
AvaII	GGWCC	1 cut(s)	160
AvrII	CCTAGG	1 cut(s)	427
BalI	TGGCCA	1 cut(s)	273
BamHI	GGATCC	1 cut(s)	139
BanI	GGYRCC	2 cut(s)	59, 1379
BanII	GRGCYC	3 cut(s)	1209, 1338, 1429
BarI	GAAGNNNNNNTAC	2 cut(s)	193, 225
BbsI	GAAGAC	1 cut(s)	879
Bbv12I	GWGCWC	2 cut(s)	547, 1209
BbvI	GCAGC	2 cut(s)	700, 988
BccI	CCATC	4 cut(s)	28, 31, 988, 1069
BciT130I	CCWGG	2 cut(s)	270, 965
BclI	TGATCA	1 cut(s)	1341
BcnI	CCSGG	1 cut(s)	1067
BcoDI	GTCTC	3 cut(s)	382, 432, 608
BcuI	ACTAGT	1 cut(s)	877
BfaI	CTAG	7 cut(s)	120, 428, 522, 806, 878, 1130, 1430
BfmI	CTRYAG	1 cut(s)	177
BfoI	RGCGCY	3 cut(s)	427, 749, 1506
BfuAI	ACCTGC	1 cut(s)	238
BisI	GCNGC	3 cut(s)	714, 977, 1021
BlnI	CCTAGG	1 cut(s)	427
BlsI	GCNGC	3 cut(s)	715, 978, 1022
BmcAI	AGTACT	1 cut(s)	1586
Bme1390I	CCNGG	3 cut(s)	270, 965, 1067
Bme18I	GGWCC	1 cut(s)	160
BmeT110I	CYCGRG	1 cut(s)	749
BmgT120I	GGNCC	4 cut(s)	160, 820, 1156, 1234
BmiI	GGNNCC	4 cut(s)	61, 141, 388, 1381
BmrFI	CCNGG	3 cut(s)	270, 965, 1067
BmrI	ACTGGG	1 cut(s)	1432
BmsI	GCATC	5 cut(s)	352, 521, 737, 1200, 1509
BmuI	ACTGGG	1 cut(s)	1432
BpiI	GAAGAC	1 cut(s)	879
BplI	GAGNNNNNCTC	2 cut(s)	549, 581
BpuEI	CTTGAG	1 cut(s)	404
BpuMI	CCSGG	1 cut(s)	1067
BsaAI	YACGTR	1 cut(s)	1319
BsaI	GGTCTC	1 cut(s)	382
BsaJI	CCNNGG	8 cut(s)	163, 268, 427, 469, 964, 1147, 1159, 1237
BsaXI	ACNNNNNCTCC	2 cut(s)	938, 968
Bsc4I	CCNNNNNNNGG	6 cut(s)	269, 341, 1153, 1231, 1232, 1529
Bse1I	ACTGG	4 cut(s)	198, 346, 1181, 1427
Bse3DI	GCAATG	1 cut(s)	913
BseBI	CCWGG	2 cut(s)	270, 965
BseDI	CCNNGG	8 cut(s)	163, 268, 427, 469, 964, 1147, 1159, 1237
BseGI	GGATG	2 cut(s)	367, 980
BseLI	CCNNNNNNNGG	6 cut(s)	269, 341, 1153, 1231, 1232, 1529
BseMI	GCAATG	1 cut(s)	913
BseMII	CTCAG	2 cut(s)	149, 415
BseNI	ACTGG	4 cut(s)	198, 346, 1181, 1427
BseRI	GAGGAG	2 cut(s)	962, 965
BseXI	GCAGC	2 cut(s)	700, 988
BseYI	CCCAGC	1 cut(s)	263
BsgI	GTGCAG	2 cut(s)	699, 1188
Bsh1236I	CGCG	1 cut(s)	1149
BshFI	GGCC	7 cut(s)	51, 273, 334, 822, 1044, 1158, 1236
BshNI	GGYRCC	2 cut(s)	59, 1379
BsiHKAI	GWGCWC	2 cut(s)	547, 1209
BsiHKCI	CYCGRG	1 cut(s)	749
BsiSI	CCGG	3 cut(s)	52, 412, 1067
BslI	CCNNNNNNNGG	6 cut(s)	269, 341, 1153, 1231, 1232, 1529
BsmAI	GTCTC	3 cut(s)	382, 432, 608
BsnI	GGCC	7 cut(s)	51, 273, 334, 822, 1044, 1158, 1236
Bso31I	GGTCTC	1 cut(s)	382
BsoBI	CYCGRG	1 cut(s)	749
Bsp1286I	GDGCHC	4 cut(s)	547, 1209, 1338, 1429
Bsp1407I	TGTACA	1 cut(s)	777
Bsp143I	GATC	3 cut(s)	139, 844, 1341
Bsp19I	CCATGG	1 cut(s)	1159
BspACI	CCGC	5 cut(s)	321, 856, 1021, 1147, 1149
BspANI	GGCC	7 cut(s)	51, 273, 334, 822, 1044, 1158, 1236
BspCNI	CTCAG	2 cut(s)	148, 414
BspFNI	CGCG	1 cut(s)	1149
BspLI	GGNNCC	4 cut(s)	61, 141, 388, 1381
BspMI	ACCTGC	1 cut(s)	238
BspPI	GGATC	2 cut(s)	134, 147
BspQI	GCTCTTC	1 cut(s)	1010
BspT107I	GGYRCC	2 cut(s)	59, 1379
BspTNI	GGTCTC	1 cut(s)	382
BsrDI	GCAATG	1 cut(s)	913
BsrGI	TGTACA	1 cut(s)	777
BsrI	ACTGG	4 cut(s)	198, 346, 1181, 1427
BssECI	CCNNGG	8 cut(s)	163, 268, 427, 469, 964, 1147, 1159, 1237
BssMI	GATC	3 cut(s)	139, 844, 1341
BssT1I	CCWWGG	3 cut(s)	163, 427, 1159
Bst2UI	CCWGG	2 cut(s)	270, 965
Bst4CI	ACNGT	3 cut(s)	314, 720, 1550
Bst6I	CTCTTC	1 cut(s)	1010
BstAPI	GCANNNNNTGC	2 cut(s)	488, 518
BstAUI	TGTACA	1 cut(s)	777
BstBAI	YACGTR	1 cut(s)	1319
BstC8I	GCNNGC	2 cut(s)	543, 1501
BstDEI	CTNAG	3 cut(s)	135, 307, 401
BstDSI	CCRYGG	3 cut(s)	1147, 1159, 1237
BstF5I	GGATG	2 cut(s)	367, 980
BstFNI	CGCG	1 cut(s)	1149
BstH2I	RGCGCY	3 cut(s)	427, 749, 1506
BstHHI	GCGC	4 cut(s)	426, 748, 1098, 1505
BstKTI	GATC	3 cut(s)	142, 847, 1344
BstMAI	GTCTC	3 cut(s)	382, 432, 608
BstMBI	GATC	3 cut(s)	139, 844, 1341
BstMWI	GCNNNNNNNGC	5 cut(s)	421, 488, 518, 682, 1155
BstNI	CCWGG	2 cut(s)	270, 965
BstSCI	CCNGG	3 cut(s)	268, 963, 1065
BstSFI	CTRYAG	1 cut(s)	177
BstUI	CGCG	1 cut(s)	1149
BstV1I	GCAGC	2 cut(s)	700, 988
BstV2I	GAAGAC	1 cut(s)	879
BstX2I	RGATCY	1 cut(s)	139
BstXI	CCANNNNNNTGG	1 cut(s)	100
BstYI	RGATCY	1 cut(s)	139
BsuRI	GGCC	7 cut(s)	51, 273, 334, 822, 1044, 1158, 1236
BtgI	CCRYGG	3 cut(s)	1147, 1159, 1237
BtsCI	GGATG	2 cut(s)	367, 980
BtsI	GCAGTG	1 cut(s)	1176
BtsIMutI	CAGTG	1 cut(s)	1176
BveI	ACCTGC	1 cut(s)	238
Cac8I	GCNNGC	2 cut(s)	543, 1501
CaiI	CAGNNNCTG	1 cut(s)	1279
CfoI	GCGC	4 cut(s)	426, 748, 1098, 1505
Cfr13I	GGNCC	4 cut(s)	160, 820, 1156, 1234
Cfr42I	CCGCGG	1 cut(s)	1150
Csp6I	GTAC	3 cut(s)	60, 778, 1585
CspCI	CAANNNNNGTGG	2 cut(s)	895, 930
CviQI	GTAC	3 cut(s)	60, 778, 1585
DdeI	CTNAG	3 cut(s)	135, 307, 401
DpnI	GATC	3 cut(s)	141, 846, 1343
DpnII	GATC	3 cut(s)	139, 844, 1341
DraI	TTTAAA	1 cut(s)	789
EaeI	YGGCCR	2 cut(s)	49, 271
Eam1104I	CTCTTC	1 cut(s)	1010
EarI	CTCTTC	1 cut(s)	1010
Ecl136II	GAGCTC	1 cut(s)	1207
Eco130I	CCWWGG	3 cut(s)	163, 427, 1159
Eco147I	AGGCCT	1 cut(s)	334
Eco24I	GRGCYC	3 cut(s)	1209, 1338, 1429
Eco31I	GGTCTC	1 cut(s)	382
Eco47I	GGWCC	1 cut(s)	160
Eco47III	AGCGCT	2 cut(s)	747, 1504
Eco53kI	GAGCTC	1 cut(s)	1207
Eco57I	CTGAAG	1 cut(s)	1301
Eco88I	CYCGRG	1 cut(s)	749
EcoICRI	GAGCTC	1 cut(s)	1207
EcoRII	CCWGG	2 cut(s)	268, 963
EcoT14I	CCWWGG	3 cut(s)	163, 427, 1159
EcoT22I	ATGCAT	1 cut(s)	730
EcoT38I	GRGCYC	3 cut(s)	1209, 1338, 1429
ErhI	CCWWGG	3 cut(s)	163, 427, 1159
FauNDI	CATATG	1 cut(s)	762
FbaI	TGATCA	1 cut(s)	1341
FblI	GTMKAC	1 cut(s)	1470
Fnu4HI	GCNGC	3 cut(s)	714, 977, 1021
FokI	GGATG	2 cut(s)	374, 967
FriOI	GRGCYC	3 cut(s)	1209, 1338, 1429
Fsp4HI	GCNGC	3 cut(s)	714, 977, 1021
FspBI	CTAG	7 cut(s)	120, 428, 522, 806, 878, 1130, 1430
GlaI	GCGC	4 cut(s)	425, 747, 1097, 1504
GluI	GCNGC	3 cut(s)	714, 977, 1021
GsaI	CCCAGC	1 cut(s)	267
HaeII	RGCGCY	3 cut(s)	427, 749, 1506
HaeIII	GGCC	7 cut(s)	51, 273, 334, 822, 1044, 1158, 1236
HapII	CCGG	3 cut(s)	52, 412, 1067
HhaI	GCGC	4 cut(s)	426, 748, 1098, 1505
Hin6I	GCGC	4 cut(s)	424, 746, 1096, 1503
HinP1I	GCGC	4 cut(s)	424, 746, 1096, 1503
HinfI	GANTC	4 cut(s)	185, 771, 868, 1562
HpaII	CCGG	3 cut(s)	52, 412, 1067
HphI	GGTGA	2 cut(s)	310, 359
Hpy166II	GTNNAC	5 cut(s)	778, 1174, 1182, 1420, 1471
Hpy188I	TCNGA	9 cut(s)	10, 241, 301, 470, 569, 838, 1036, 1115, 1281
Hpy188III	TCNNGA	6 cut(s)	24, 137, 575, 613, 1339, 1508
Hpy8I	GTNNAC	5 cut(s)	778, 1174, 1182, 1420, 1471
Hpy99I	CGWCG	1 cut(s)	1268
HpyAV	CCTTC	2 cut(s)	219, 1017
HpyCH4III	ACNGT	3 cut(s)	314, 720, 1550
HpyCH4IV	ACGT	3 cut(s)	1184, 1263, 1318
HpyF10VI	GCNNNNNNNGC	5 cut(s)	421, 488, 518, 682, 1155
HpyF3I	CTNAG	3 cut(s)	135, 307, 401
HpySE526I	ACGT	3 cut(s)	1184, 1263, 1318
HspAI	GCGC	4 cut(s)	424, 746, 1096, 1503
KpnI	GGTACC	1 cut(s)	63
Ksp22I	TGATCA	1 cut(s)	1341
KspI	CCGCGG	1 cut(s)	1150
Kzo9I	GATC	3 cut(s)	139, 844, 1341
LguI	GCTCTTC	1 cut(s)	1010
LmnI	GCTCC	2 cut(s)	1103, 1510
Lsp1109I	GCAGC	2 cut(s)	700, 988
LweI	GCATC	5 cut(s)	352, 521, 737, 1200, 1509
MaeI	CTAG	7 cut(s)	120, 428, 522, 806, 878, 1130, 1430
MaeII	ACGT	3 cut(s)	1184, 1263, 1318
MaeIII	GTNAC	2 cut(s)	347, 1550
MalI	GATC	3 cut(s)	141, 846, 1343
MboI	GATC	3 cut(s)	139, 844, 1341
MboII	GAAGA	5 cut(s)	23, 879, 1027, 1186, 1557
MflI	RGATCY	1 cut(s)	139
MhlI	GDGCHC	4 cut(s)	547, 1209, 1338, 1429
MlsI	TGGCCA	1 cut(s)	273
MluCI	AATT	6 cut(s)	64, 242, 253, 939, 985, 1362
MluNI	TGGCCA	1 cut(s)	273
MmeI	TCCRAC	1 cut(s)	1093
Mox20I	TGGCCA	1 cut(s)	273
Mph1103I	ATGCAT	1 cut(s)	730
MroXI	GAANNNNTTC	1 cut(s)	801
MscI	TGGCCA	1 cut(s)	273
MseI	TTAA	2 cut(s)	788, 1260
MslI	CAYNNNNRTG	2 cut(s)	342, 1164
Msp20I	TGGCCA	1 cut(s)	273
MspA1I	CMGCKG	2 cut(s)	858, 1149
MspI	CCGG	3 cut(s)	52, 412, 1067
MspR9I	CCNGG	3 cut(s)	270, 965, 1067
MvaI	CCWGG	2 cut(s)	270, 965
MvnI	CGCG	1 cut(s)	1149
MwoI	GCNNNNNNNGC	5 cut(s)	421, 488, 518, 682, 1155
NciI	CCSGG	1 cut(s)	1067
NcoI	CCATGG	1 cut(s)	1159
NdeI	CATATG	1 cut(s)	762
NdeII	GATC	3 cut(s)	139, 844, 1341
NlaIV	GGNNCC	4 cut(s)	61, 141, 388, 1381
NmuCI	GTSAC	1 cut(s)	347
NsiI	ATGCAT	1 cut(s)	730
PaeR7I	CTCGAG	1 cut(s)	749
PceI	AGGCCT	1 cut(s)	334
PciSI	GCTCTTC	1 cut(s)	1010
PdmI	GAANNNNTTC	1 cut(s)	801
PfeI	GAWTC	4 cut(s)	185, 771, 868, 1562
PfoI	TCCNGGA	1 cut(s)	1065
PkrI	GCNGC	3 cut(s)	715, 978, 1022
Ppu21I	YACGTR	1 cut(s)	1319
Psp124BI	GAGCTC	1 cut(s)	1209
Psp6I	CCWGG	2 cut(s)	268, 963
PspFI	CCCAGC	1 cut(s)	263
PspGI	CCWGG	2 cut(s)	268, 963
PspN4I	GGNNCC	4 cut(s)	61, 141, 388, 1381
PspPI	GGNCC	4 cut(s)	160, 820, 1156, 1234
PspXI	VCTCGAGB	1 cut(s)	749
PstNI	CAGNNNCTG	1 cut(s)	1279
PsuI	RGATCY	1 cut(s)	139
RsaI	GTAC	3 cut(s)	61, 779, 1586
RsaNI	GTAC	3 cut(s)	60, 778, 1585
RseI	CAYNNNNRTG	2 cut(s)	342, 1164
SacI	GAGCTC	1 cut(s)	1209
SacII	CCGCGG	1 cut(s)	1150
SapI	GCTCTTC	1 cut(s)	1010
SaqAI	TTAA	2 cut(s)	788, 1260
SatI	GCNGC	3 cut(s)	714, 977, 1021
Sau3AI	GATC	3 cut(s)	139, 844, 1341
Sau96I	GGNCC	4 cut(s)	160, 820, 1156, 1234
ScaI	AGTACT	1 cut(s)	1586
ScrFI	CCNGG	3 cut(s)	270, 965, 1067
SduI	GDGCHC	4 cut(s)	547, 1209, 1338, 1429
SfaNI	GCATC	5 cut(s)	352, 521, 737, 1200, 1509
SfcI	CTRYAG	1 cut(s)	177
Sfr274I	CTCGAG	1 cut(s)	749
Sfr303I	CCGCGG	1 cut(s)	1150
SgrBI	CCGCGG	1 cut(s)	1150
SinI	GGWCC	1 cut(s)	160
SlaI	CTCGAG	1 cut(s)	749
SmiMI	CAYNNNNRTG	2 cut(s)	342, 1164
SmlI	CTYRAG	2 cut(s)	419, 749
SmoI	CTYRAG	2 cut(s)	419, 749
SpeI	ACTAGT	1 cut(s)	877
Sse9I	AATT	6 cut(s)	64, 242, 253, 939, 985, 1362
SseBI	AGGCCT	1 cut(s)	334
SsiI	CCGC	5 cut(s)	321, 856, 1021, 1147, 1149
SspMI	CTAG	7 cut(s)	120, 428, 522, 806, 878, 1130, 1430
SstI	GAGCTC	1 cut(s)	1209
StuI	AGGCCT	1 cut(s)	334
StyD4I	CCNGG	3 cut(s)	268, 963, 1065
StyI	CCWWGG	3 cut(s)	163, 427, 1159
TaaI	ACNGT	3 cut(s)	314, 720, 1550
TaiI	ACGT	3 cut(s)	1187, 1266, 1321
TaqI	TCGA	3 cut(s)	612, 750, 1330
TasI	AATT	6 cut(s)	64, 242, 253, 939, 985, 1362
TatI	WGTACW	2 cut(s)	777, 1584
TauI	GCSGC	1 cut(s)	1023
TfiI	GAWTC	4 cut(s)	185, 771, 868, 1562
Tru1I	TTAA	2 cut(s)	788, 1260
Tru9I	TTAA	2 cut(s)	788, 1260
TscAI	CASTG	1 cut(s)	1176
TseFI	GTSAC	1 cut(s)	347
TseI	GCWGC	2 cut(s)	713, 976
Tsp45I	GTSAC	1 cut(s)	347
TspDTI	ATGAA	3 cut(s)	509, 879, 1137
TspGWI	ACGGA	1 cut(s)	1254
TspRI	CASTG	1 cut(s)	1176
VpaK11BI	GGWCC	1 cut(s)	160
XapI	RAATTY	2 cut(s)	242, 939
XcmI	CCANNNNNNNNNTGG	2 cut(s)	499, 905
XhoI	CTCGAG	1 cut(s)	749
XmaJI	CCTAGG	1 cut(s)	427
XmiI	GTMKAC	1 cut(s)	1470
XmnI	GAANNNNTTC	1 cut(s)	801
XspI	CTAG	7 cut(s)	120, 428, 522, 806, 878, 1130, 1430
ZrmI	AGTACT	1 cut(s)	1586
Zsp2I	ATGCAT	1 cut(s)	730

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.