Rroxscaffold_1G00075820

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0008724
Physical Location & Seq
Reverse (-)
96416227 .. 96422514
6288 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00075820.1

Sequence Viewer

Length: 1731 bp
ATGAAGTTTATGAAAATTGGGACCAAGCCGGATACCTTCTACACTGAACGAGCTACCAGGTCTGTAGTTTCAGATGTACCCAGCGACCTTCTCATACAAATCAACAGCATCAGTTATGTTCTCCATAAGCTGCAGTTTCCATTGCTTCCAAAATGCGGTCTCTTACAACGGCTTTGCGGTGGTTCTGGTGATCTGGAAAAAATGAACATAGAGCTTCACGACATTCCAGGAGGCGAAGAAGCTTTTGAACTCTGTGCTAAGTTCTGTTATGGAATTAAAATAAAACTCAGTGCCTATAACTTTTTACCTGCATATTGTGCTGCTAAATTCCTTGAAATGACTGAACCTGTAGACAAGGGAAATTTTGTCCTAAAACTCGAGGCTTTCCTCAATTCATGCATTCTCGAAGGTTGGAAAGACTCCATCGTCACACTACAAACTACTGTTAAGTTACCTGACTGGTCTGAGAATCTTGGAATCATCAGAAAGTGCATCGATTCAATTGTTGAAAAAATCCTTACACCCCCACCACAGGTGACATGGTCATACACTTATACCAGACCTGGTTACAACAAAAAGCGTCATCATTCTGTCCCCAAGGATTGGTGGACAGAGGATATATCAGACCTTGATATAGACCTGTTTCGGTGTATTGTTACTGCTGTTAGATCAACCTATATGCTGCCACCACAGCTCATTGGGGAGGCTTTGCACGTCTACGCTTGTCGTTGGCTACCAGACACCACAAACATTAGACCTCCTCCGGATCAAAATAGCGATTATAATCATGATGAAACATTAATGGAAAAGAATCGAAGGATTGTTGATACCATTGCTAGTATGATTCCTGGAGATAAGGGATCGGTTTCAGTTGGTTTCTTGCTAAGGCTTCTTGTTATTGCAAATTATCTAGGAGGAGTGTCTCCGGTGACAAAGACAGAACTCTTGAGGAGATCCAGTCTACAACTTGAAGAGGCAACCGTGAATGACCTGCTTTTTCCTTCACACTCACCCACTGACCCTGAATTTTATGATATTGACTTGGTGTTGGCACTCTTGCAAAGTTTCTTGGTGATATGGAGAAGACAATCCCCTGCAGCAGCTGCAGAAAACAGCCACCACTTTTTCAGGACAATAAGAAAGGTTGGGAAGATCATTGATTCTTACCTTCAAGTCGTTGCAAGGGATGCCAACATGCCAGTATCAAAAGTGGCAACTCTTGCTGAAGCTTTGCCAGATATGGCTAGGGAAGACCATGATGACATCTACAAGGCTATTAACATTTATTTAAAGGAGCACTCTGATCTGAGCAAGGCAGATAAGAAGCGCTTGTGCCGCATTTTAGACTGCCAGAAGTTGTCGCCAGAGGTACGTGCTCATGCTGTCAAAAATGAGAGGCTACCATTGAGGATTGTTGTGCAAGTCCTCTTCTTTGAGCAAGAGAGAGGTTCCAACTCCAAGGCAGCAGCGACATCTCATAGACTACCGGGCCAGCTGGAGCAACTTTCCAGCTCAGGAAAACAAACATCAACTACCAGCAGGGGTGAAGATCATGCAGCTAAGCTAAGATTGGGTGGAGATGATGAAAAACTCAGTAGGGGGAGGGCACGAGAAGAACCAATAATGCCGTTTCTGAAACCACGAATGCTACTGGAAAGAGAGATATTTATGAGCAAAGGAAAAGATCAGAAGCAAAGTCTGCAGTGGAATTCACGGAAAGAAGGGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

576

Amino Acids

65.3

Weight (kDa)

8.33

Isoelectric Point (pI)

49.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 201 - 456 3.5e-78 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AasI GACNNNNNNGTC 1 cut(s) 425
Acc36I ACCTGC 2 cut(s) 316, 999
AccB7I CCANNNNNTGG 1 cut(s) 603
AccI GTMKAC 3 cut(s) 351, 717, 961
AccIII TCCGGA 1 cut(s) 763
AciI CCGC 3 cut(s) 156, 177, 1336
AclWI GGATC 3 cut(s) 774, 868, 948
AcsI RAATTY 4 cut(s) 326, 361, 1025, 1708
AcuI CTGAAG 1 cut(s) 1245
AfaI GTAC 2 cut(s) 78, 1371
AfeI AGCGCT 1 cut(s) 1328
AfiI CCNNNNNNNGG 3 cut(s) 155, 532, 603
AgsI TTSAA 6 cut(s) 248, 335, 501, 509, 971, 1172
AjiI CACGTC 1 cut(s) 715
AjnI CCWGG 4 cut(s) 56, 226, 562, 847
Alw21I GWGCWC 2 cut(s) 1299, 1378
Alw26I GTCTC 2 cut(s) 164, 927
AlwI GGATC 3 cut(s) 774, 868, 948
AlwNI CAGNNNCTG 1 cut(s) 1103
Ama87I CYCGRG 1 cut(s) 377
Aor13HI TCCGGA 1 cut(s) 763
Aor51HI AGCGCT 1 cut(s) 1328
AoxI GGCC 1 cut(s) 1489
ApeKI GCWGC 9 cut(s) 130, 320, 682, 1097, 1100, 1103, 1463, 1466, 1556
ApoI RAATTY 4 cut(s) 326, 361, 1025, 1708
AseI ATTAAT 1 cut(s) 800
AspLEI GCGC 1 cut(s) 1329
AspS9I GGNCC 2 cut(s) 21, 1489
AsuC2I CCSGG 1 cut(s) 1488
AsuHPI GGTGA 6 cut(s) 200, 547, 940, 1002, 1084, 1556
AvaI CYCGRG 1 cut(s) 377
AvaII GGWCC 1 cut(s) 21
BaeGI GKGCMC 1 cut(s) 1609
BauI CACGAG 1 cut(s) 1608
BbsI GAAGAC 2 cut(s) 1090, 1257
Bbv12I GWGCWC 2 cut(s) 1299, 1378
BbvI GCAGC 9 cut(s) 117, 307, 669, 1090, 1109, 1112, 1475, 1478, 1568
BccI CCATC 1 cut(s) 431
BceAI ACGGC 2 cut(s) 185, 1612
BciT130I CCWGG 4 cut(s) 58, 228, 564, 849
BciVI GTATCC 1 cut(s) 25
BcnI CCSGG 1 cut(s) 1488
BcoDI GTCTC 2 cut(s) 164, 927
BfaI CTAG 3 cut(s) 837, 911, 1245
BfmI CTRYAG 6 cut(s) 63, 131, 348, 1095, 1104, 1700
BfoI RGCGCY 1 cut(s) 1330
BfuAI ACCTGC 2 cut(s) 316, 999
BfuI GTATCC 1 cut(s) 25
BlpI GCTNAGC 1 cut(s) 1560
Bme1390I CCNGG 5 cut(s) 58, 228, 564, 849, 1488
Bme18I GGWCC 1 cut(s) 21
BmeT110I CYCGRG 1 cut(s) 377
BmgBI CACGTC 1 cut(s) 715
BmgT120I GGNCC 2 cut(s) 21, 1489
BmiI GGNNCC 2 cut(s) 22, 1450
BmrFI CCNGG 5 cut(s) 58, 228, 564, 849, 1488
BmsI GCATC 3 cut(s) 117, 501, 1177
BpiI GAAGAC 2 cut(s) 1090, 1257
BpmI CTGGAG 2 cut(s) 870, 1517
Bpu10I CCTNAGC 2 cut(s) 884, 1513
Bpu1102I GCTNAGC 1 cut(s) 1560
BpuEI CTTGAG 1 cut(s) 967
BpuMI CCSGG 1 cut(s) 1488
Bsa29I ATCGAT 1 cut(s) 495
BsaAI YACGTR 1 cut(s) 1373
BsaBI GATNNNNATC 1 cut(s) 783
BsaI GGTCTC 1 cut(s) 164
BsaJI CCNNGG 2 cut(s) 597, 1458
BsaWI WCCGGW 2 cut(s) 763, 925
BsaXI ACNNNNNCTCC 2 cut(s) 943, 973
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 532, 603
Bse1I ACTGG 4 cut(s) 464, 957, 1199, 1656
Bse3DI GCAATG 2 cut(s) 140, 831
Bse8I GATNNNNATC 1 cut(s) 783
BseAI TCCGGA 1 cut(s) 763
BseBI CCWGG 4 cut(s) 58, 228, 564, 849
BseCI ATCGAT 1 cut(s) 495
BseDI CCNNGG 2 cut(s) 597, 1458
BseGI GGATG 1 cut(s) 1192
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 3 cut(s) 155, 532, 603
BseMI GCAATG 2 cut(s) 140, 831
BseMII CTCAG 5 cut(s) 301, 456, 1298, 1527, 1606
BseNI ACTGG 4 cut(s) 464, 957, 1199, 1656
BseRI GAGGAG 3 cut(s) 750, 930, 964
BseSI GKGCMC 1 cut(s) 1609
BseXI GCAGC 9 cut(s) 117, 307, 669, 1090, 1109, 1112, 1475, 1478, 1568
BseYI CCCAGC 1 cut(s) 80
BshFI GGCC 1 cut(s) 1491
BshVI ATCGAT 1 cut(s) 495
BsiHKAI GWGCWC 2 cut(s) 1299, 1378
BsiHKCI CYCGRG 1 cut(s) 377
BsiSI CCGG 4 cut(s) 29, 764, 926, 1487
BslFI GGGAC 2 cut(s) 34, 578
BslI CCNNNNNNNGG 3 cut(s) 155, 532, 603
BsmAI GTCTC 2 cut(s) 164, 927
BsmFI GGGAC 2 cut(s) 34, 578
BsmI GAATGC 2 cut(s) 399, 1650
BsnI GGCC 1 cut(s) 1491
Bso31I GGTCTC 1 cut(s) 164
BsoBI CYCGRG 1 cut(s) 377
Bsp1286I GDGCHC 3 cut(s) 1299, 1378, 1609
Bsp13I TCCGGA 1 cut(s) 763
Bsp143I GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
Bsp1720I GCTNAGC 1 cut(s) 1560
BspACI CCGC 3 cut(s) 156, 177, 1336
BspANI GGCC 1 cut(s) 1491
BspCNI CTCAG 5 cut(s) 300, 457, 1299, 1526, 1605
BspDI ATCGAT 1 cut(s) 495
BspEI TCCGGA 1 cut(s) 763
BspHI TCATGA 1 cut(s) 787
BspLI GGNNCC 2 cut(s) 22, 1450
BspMAI CTGCAG 4 cut(s) 135, 1099, 1108, 1704
BspMI ACCTGC 2 cut(s) 316, 999
BspPI GGATC 3 cut(s) 774, 868, 948
BspTNI GGTCTC 1 cut(s) 164
BsrDI GCAATG 2 cut(s) 140, 831
BsrI ACTGG 4 cut(s) 464, 957, 1199, 1656
BssECI CCNNGG 2 cut(s) 597, 1458
BssMI GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
BssSI CACGAG 1 cut(s) 1608
BssT1I CCWWGG 2 cut(s) 597, 1458
Bst2BI CACGAG 1 cut(s) 1608
Bst2UI CCWGG 4 cut(s) 58, 228, 564, 849
Bst4CI ACNGT 2 cut(s) 445, 982
Bst6I CTCTTC 2 cut(s) 966, 1433
BstAPI GCANNNNNTGC 5 cut(s) 317, 1103, 1187, 1220, 1699
BstBAI YACGTR 1 cut(s) 1373
BstC8I GCNNGC 1 cut(s) 1493
BstDEI CTNAG 9 cut(s) 258, 287, 465, 884, 1307, 1513, 1560, 1565, 1592
BstF5I GGATG 1 cut(s) 1192
BstH2I RGCGCY 1 cut(s) 1330
BstHHI GCGC 1 cut(s) 1329
BstKTI GATC 9 cut(s) 193, 671, 769, 863, 956, 1155, 1306, 1552, 1687
BstMAI GTCTC 2 cut(s) 164, 927
BstMBI GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
BstMWI GCNNNNNNNGC 7 cut(s) 317, 691, 1103, 1187, 1220, 1335, 1699
BstNI CCWGG 4 cut(s) 58, 228, 564, 849
BstNSI RCATGY 1 cut(s) 1198
BstSCI CCNGG 5 cut(s) 56, 226, 562, 847, 1486
BstSFI CTRYAG 6 cut(s) 63, 131, 348, 1095, 1104, 1700
BstSLI GKGCMC 1 cut(s) 1609
BstV1I GCAGC 9 cut(s) 117, 307, 669, 1090, 1109, 1112, 1475, 1478, 1568
BstV2I GAAGAC 2 cut(s) 1090, 1257
BstX2I RGATCY 1 cut(s) 953
BstYI RGATCY 1 cut(s) 953
Bsu15I ATCGAT 1 cut(s) 495
BsuI GTATCC 1 cut(s) 25
BsuRI GGCC 1 cut(s) 1491
BsuTUI ATCGAT 1 cut(s) 495
BtrI CACGTC 1 cut(s) 715
BtsCI GGATG 1 cut(s) 1192
BtsI GCAGTG 1 cut(s) 1709
BtsIMutI CAGTG 4 cut(s) 42, 295, 1014, 1709
BveI ACCTGC 2 cut(s) 316, 999
Cac8I GCNNGC 1 cut(s) 1493
CaiI CAGNNNCTG 1 cut(s) 1103
CciI TCATGA 1 cut(s) 787
CfoI GCGC 1 cut(s) 1329
Cfr13I GGNCC 2 cut(s) 21, 1489
ClaI ATCGAT 1 cut(s) 495
CseI GACGC 1 cut(s) 569
CsiI ACCWGGT 2 cut(s) 56, 562
Csp6I GTAC 2 cut(s) 77, 1370
CviAII CATG 7 cut(s) 396, 540, 788, 1195, 1256, 1379, 1553
CviQI GTAC 2 cut(s) 77, 1370
DdeI CTNAG 9 cut(s) 258, 287, 465, 884, 1307, 1513, 1560, 1565, 1592
DpnI GATC 9 cut(s) 192, 670, 768, 862, 955, 1154, 1305, 1551, 1686
DpnII GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
DraI TTTAAA 1 cut(s) 1290
DrdI GACNNNNNNGTC 1 cut(s) 425
DseDI GACNNNNNNGTC 1 cut(s) 425
Eam1104I CTCTTC 2 cut(s) 966, 1433
EarI CTCTTC 2 cut(s) 966, 1433
Eco130I CCWWGG 2 cut(s) 597, 1458
Eco31I GGTCTC 1 cut(s) 164
Eco47I GGWCC 1 cut(s) 21
Eco47III AGCGCT 1 cut(s) 1328
Eco57I CTGAAG 1 cut(s) 1245
Eco88I CYCGRG 1 cut(s) 377
EcoRI GAATTC 1 cut(s) 1708
EcoRII CCWGG 4 cut(s) 56, 226, 562, 847
EcoT14I CCWWGG 2 cut(s) 597, 1458
EcoT22I ATGCAT 1 cut(s) 401
ErhI CCWWGG 2 cut(s) 597, 1458
FaeI CATG 7 cut(s) 399, 543, 791, 1198, 1259, 1382, 1556
FalI AAGNNNNNCTT 2 cut(s) 1313, 1345
FaqI GGGAC 2 cut(s) 34, 578
FatI CATG 7 cut(s) 395, 539, 787, 1194, 1255, 1378, 1552
FblI GTMKAC 3 cut(s) 351, 717, 961
FokI GGATG 1 cut(s) 1199
FspBI CTAG 3 cut(s) 837, 911, 1245
GlaI GCGC 1 cut(s) 1328
GsaI CCCAGC 1 cut(s) 84
GsuI CTGGAG 2 cut(s) 870, 1517
HaeII RGCGCY 1 cut(s) 1330
HaeIII GGCC 1 cut(s) 1491
HapII CCGG 4 cut(s) 29, 764, 926, 1487
HgaI GACGC 1 cut(s) 569
HhaI GCGC 1 cut(s) 1329
Hin1II CATG 7 cut(s) 399, 543, 791, 1198, 1259, 1382, 1556
Hin6I GCGC 1 cut(s) 1327
HinP1I GCGC 1 cut(s) 1327
HindIII AAGCTT 2 cut(s) 240, 1227
HinfI GANTC 7 cut(s) 419, 469, 477, 497, 811, 844, 1160
HpaII CCGG 4 cut(s) 29, 764, 926, 1487
HphI GGTGA 6 cut(s) 200, 547, 940, 1002, 1084, 1556
Hpy166II GTNNAC 4 cut(s) 352, 609, 718, 962
Hpy188I TCNGA 8 cut(s) 73, 466, 485, 625, 1303, 1308, 1635, 1689
Hpy188III TCNNGA 8 cut(s) 194, 218, 404, 764, 788, 946, 1129, 1515
Hpy8I GTNNAC 4 cut(s) 352, 609, 718, 962
HpyAV CCTTC 7 cut(s) 46, 98, 401, 810, 1011, 1178, 1715
HpyCH4III ACNGT 2 cut(s) 445, 982
HpyCH4IV ACGT 2 cut(s) 714, 1372
HpyF10VI GCNNNNNNNGC 7 cut(s) 317, 691, 1103, 1187, 1220, 1335, 1699
HpyF3I CTNAG 9 cut(s) 258, 287, 465, 884, 1307, 1513, 1560, 1565, 1592
HpySE526I ACGT 2 cut(s) 714, 1372
Hsp92II CATG 7 cut(s) 399, 543, 791, 1198, 1259, 1382, 1556
HspAI GCGC 1 cut(s) 1327
Kpn2I TCCGGA 1 cut(s) 763
Kzo9I GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
LmnI GCTCC 2 cut(s) 1294, 1498
Lsp1109I GCAGC 9 cut(s) 117, 307, 669, 1090, 1109, 1112, 1475, 1478, 1568
LweI GCATC 3 cut(s) 117, 501, 1177
MabI ACCWGGT 2 cut(s) 56, 562
MaeI CTAG 3 cut(s) 837, 911, 1245
MaeII ACGT 2 cut(s) 714, 1372
MaeIII GTNAC 6 cut(s) 427, 450, 535, 566, 655, 928
MalI GATC 9 cut(s) 192, 670, 768, 862, 955, 1154, 1305, 1551, 1686
MboI GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
MboII GAAGA 8 cut(s) 248, 983, 1095, 1162, 1262, 1420, 1559, 1625
MfeI CAATTG 1 cut(s) 501
MflI RGATCY 1 cut(s) 953
MhlI GDGCHC 3 cut(s) 1299, 1378, 1609
MluCI AATT 9 cut(s) 15, 273, 326, 361, 391, 501, 904, 1025, 1708
MlyI GAGTC 1 cut(s) 413
MmeI TCCRAC 2 cut(s) 392, 1476
Mph1103I ATGCAT 1 cut(s) 401
MroI TCCGGA 1 cut(s) 763
MseI TTAA 5 cut(s) 276, 447, 800, 1278, 1289
MspA1I CMGCKG 2 cut(s) 1103, 1495
MspI CCGG 4 cut(s) 29, 764, 926, 1487
MspR9I CCNGG 5 cut(s) 58, 228, 564, 849, 1488
MunI CAATTG 1 cut(s) 501
Mva1269I GAATGC 2 cut(s) 399, 1650
MvaI CCWGG 4 cut(s) 58, 228, 564, 849
MwoI GCNNNNNNNGC 7 cut(s) 317, 691, 1103, 1187, 1220, 1335, 1699
NciI CCSGG 1 cut(s) 1488
NdeII GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
NlaIII CATG 7 cut(s) 399, 543, 791, 1198, 1259, 1382, 1556
NlaIV GGNNCC 2 cut(s) 22, 1450
NmuCI GTSAC 3 cut(s) 427, 535, 928
NsiI ATGCAT 1 cut(s) 401
NspI RCATGY 1 cut(s) 1198
PaeR7I CTCGAG 1 cut(s) 377
PagI TCATGA 1 cut(s) 787
PctI GAATGC 2 cut(s) 399, 1650
PfeI GAWTC 6 cut(s) 469, 477, 497, 811, 844, 1160
PflFI GACNNNGTC 1 cut(s) 541
PflMI CCANNNNNTGG 1 cut(s) 603
PfoI TCCNGGA 2 cut(s) 226, 847
PleI GAGTC 1 cut(s) 413
PpsI GAGTC 1 cut(s) 413
Ppu21I YACGTR 1 cut(s) 1373
PshBI ATTAAT 1 cut(s) 800
PsiI TTATAA 1 cut(s) 783
Psp6I CCWGG 4 cut(s) 56, 226, 562, 847
PspFI CCCAGC 1 cut(s) 80
PspGI CCWGG 4 cut(s) 56, 226, 562, 847
PspN4I GGNNCC 2 cut(s) 22, 1450
PspPI GGNCC 2 cut(s) 21, 1489
PspXI VCTCGAGB 1 cut(s) 377
PstI CTGCAG 4 cut(s) 135, 1099, 1108, 1704
PstNI CAGNNNCTG 1 cut(s) 1103
PsuI RGATCY 1 cut(s) 953
PsyI GACNNNGTC 1 cut(s) 541
PvuII CAGCTG 2 cut(s) 1103, 1495
RsaI GTAC 2 cut(s) 78, 1371
RsaNI GTAC 2 cut(s) 77, 1370
SaqAI TTAA 5 cut(s) 276, 447, 800, 1278, 1289
Sau3AI GATC 9 cut(s) 190, 668, 766, 860, 953, 1152, 1303, 1549, 1684
Sau96I GGNCC 2 cut(s) 21, 1489
SchI GAGTC 1 cut(s) 413
ScrFI CCNGG 5 cut(s) 58, 228, 564, 849, 1488
SduI GDGCHC 3 cut(s) 1299, 1378, 1609
SexAI ACCWGGT 2 cut(s) 56, 562
SfaNI GCATC 3 cut(s) 117, 501, 1177
SfcI CTRYAG 6 cut(s) 63, 131, 348, 1095, 1104, 1700
Sfr274I CTCGAG 1 cut(s) 377
SinI GGWCC 1 cut(s) 21
SlaI CTCGAG 1 cut(s) 377
SmlI CTYRAG 2 cut(s) 377, 946
SmoI CTYRAG 2 cut(s) 377, 946
Sse9I AATT 9 cut(s) 15, 273, 326, 361, 391, 501, 904, 1025, 1708
SsiI CCGC 3 cut(s) 156, 177, 1336
SspMI CTAG 3 cut(s) 837, 911, 1245
StyD4I CCNGG 5 cut(s) 56, 226, 562, 847, 1486
StyI CCWWGG 2 cut(s) 597, 1458
TaaI ACNGT 2 cut(s) 445, 982
TaiI ACGT 2 cut(s) 717, 1375
TaqI TCGA 4 cut(s) 378, 405, 495, 814
TasI AATT 9 cut(s) 15, 273, 326, 361, 391, 501, 904, 1025, 1708
TauI GCSGC 1 cut(s) 1338
TfiI GAWTC 6 cut(s) 469, 477, 497, 811, 844, 1160
Tru1I TTAA 5 cut(s) 276, 447, 800, 1278, 1289
Tru9I TTAA 5 cut(s) 276, 447, 800, 1278, 1289
TscAI CASTG 4 cut(s) 49, 295, 1021, 1709
TseFI GTSAC 3 cut(s) 427, 535, 928
TseI GCWGC 9 cut(s) 130, 320, 682, 1097, 1100, 1103, 1463, 1466, 1556
Tsp45I GTSAC 3 cut(s) 427, 535, 928
TspDTI ATGAA 6 cut(s) 17, 26, 218, 384, 807, 1599
TspGWI ACGGA 1 cut(s) 1729
TspRI CASTG 4 cut(s) 49, 295, 1021, 1709
Tth111I GACNNNGTC 1 cut(s) 541
Van91I CCANNNNNTGG 1 cut(s) 603
VpaK11BI GGWCC 1 cut(s) 21
VspI ATTAAT 1 cut(s) 800
XapI RAATTY 4 cut(s) 326, 361, 1025, 1708
XceI RCATGY 1 cut(s) 1198
XcmI CCANNNNNNNNNTGG 1 cut(s) 537
XhoI CTCGAG 1 cut(s) 377
XmiI GTMKAC 3 cut(s) 351, 717, 961
XspI CTAG 3 cut(s) 837, 911, 1245
Zsp2I ATGCAT 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.