Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0009877

Physical Location & Seq

Genomic Coordinates Reverse (-)

5564853 .. 5569726

Gene Structure 4874 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00082830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGCTGATGACGGTTATTCGAATTTGTCACGTGTATTCACAACTCAAGAGGTGGAGTTGATCCGAGCACATGTAATTCCTTTGTGGGTTGGACTCTTGGAGCCATTACCTGATTGCATTGAGATTGGGCTCCCCAAGACCCGCTTCATTGGAAGAAGACAGCTTTTCTTTACTGGCATGTCCTCCGCTTGCTCTGAATCTCAATCAACCTCTACTCATTCTCCAGACGGCGCCGTTTTACCCTTCCCCATTTCCACTCCAAGGAGTGTTCAAGAACTGAGCAAGGATATCGAGCCGTTAGTGCGTAAGAGTACTGCTTTCACAACAAGGAGGGCTTTGTTTGCGACTATATTCATGTACTCGTTGTATGATCCTTCAAGGTACTTGTCAGCTCTAGCTTTAGGGGATCCATCTGTAACAATTGAAGAAGTAACTCCCCCAGTTTTCGCTTCCGGAACACTCTTCCCCACTGAGGAAAGAATTGTCAAACTCTTTGAGAAGAACACAAATTCTGTTGTTAACATTTTCGATGTAACATTGCGCCCTCAACTTAATGTAACTGGTGTGGTCGAGGTTCCCGAAGGAAATGGTTCAGGAGTAGTTTGGGATAAACAAGGACACATTGTAACAAACTATCATGTAATTGGTAATGCACTCTCAAGAAATCCAGGTCTCGGGCAGGTTGTTGCACGAGTTAACATTCTGACATCGGAAGGGGTACAAAAGAATTTTGAGGGAACTCTAGTTGGTGCTGATCGTGCGAAGGATCTTGCTGTCTTGAAGGTAGAAGCCTCTGAAGATCTGTTGAGGCCTATTGTTGTGGGGCAGTCATCTTCTCTAAGAGTTGGGCAGCAATGTTTAGCAATTGGAAATCCATTTGGATTTGATCATACCCTTACTGTTGGAGTTATTAGTGGACTGAATCGAGACATTTTTAGTCAAGCGGGAGTCACCATTAATGGTGGAATTCAAACCGATGCAGCTATCAATCCTGGGAACAGTGGAGGACCCCTGCTAAATTCAAAAGGAAATTTGATTGGGATAAATACTGCAATATTTACTCAGACAGGTACATCAGCAGGTGTAGGATTTGCTATCCAATCATCAACTGTGCTAAAAATTGTCCCTCAGTTGATCCAATTCGGCAAAGTTGTTCGAGCTGGTTTGAATGTGGATATAGCTCCAGACCTGATTGCAAATCAACTCAATGTTCGTTATGGAGCTCTTATTTTACAGGTCCCTAAAAATAGTGTTGCAGCGAAGGCTGGCCTACTTCCTACCACAAGGGGATTTGCGGGTAACATAGTCCTCGGGGATGTCATTGTTGGAGTTAACAACAAACCTGTTAAAAACCAAGCAGAATTGAACAGCGTATTGGATGAATTTAGCGTGGGGGAGAAAGTAATCTTAAATATTCAGAGGAGCGGTGAAAATTTGGAGGTTCCCATAATATTAGAGGAAAAGAGTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009534 GO:0009536 GO:0009543 GO:0009579 GO:0009765 GO:0009987 GO:0010206 GO:0015979 GO:0016787 GO:0019538 GO:0019684 GO:0030091 GO:0031976 GO:0031977 GO:0031978 GO:0031984 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

490

Amino Acids

52.26

Weight (kDa)

5.86

Isoelectric Point (pI)

39.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin_2	PF13365	197 - 348	9.5e-30	Trypsin-like peptidase domain
Trypsin	PF00089	198 - 374	8.8e-18	Trypsin
PDZ_2	PF13180	403 - 483	6.7e-09	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009877)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39830 AT5G39830
fragaria_vesca	FvH4_6g48710 FvH4_6g48710 FvH4_6g48710 FvH4_6g48710
malus_domestica	MD09G1050500.v1.1
prunus_persica	Prupe.3G268300_v2.0.a1 Prupe.3G268300_v2.0.a1
pyrus_communis	pycom111g04160
rosa_chinensis	RchiOBHm_Chr2g0168631
rosa_laevigata	RLG00000021792
rosa_multiflora	Rmu_sc0002416.1_g000009
rosa_roxburghii	Rroxscaffold_2G00082830
rosa_rugosa	Rorug02G0534300 Rorug02G0534300
rosa_samantha	Rh2AG604900 Rh2BG617900 Rh2CG586100 Rh2DG628500
rosa_wichuraiana	Rw2G050140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1070
Acc36I	ACCTGC	2 cut(s)	670, 1070
AccB1I	GGYRCC	1 cut(s)	230
AccBSI	CCGCTC	1 cut(s)	1425
AccIII	TCCGGA	1 cut(s)	452
AciI	CCGC	5 cut(s)	142, 186, 944, 1295, 1425
AclWI	GGATC	6 cut(s)	55, 365, 401, 414, 774, 1129
AcsI	RAATTY	8 cut(s)	22, 508, 727, 966, 1018, 1030, 1382, 1432
AcuI	CTGAAG	1 cut(s)	816
AcvI	CACGTG	1 cut(s)	32
AcyI	GRCGYC	1 cut(s)	231
AfaI	GTAC	5 cut(s)	313, 359, 383, 720, 1072
AfiI	CCNNNNNNNGG	3 cut(s)	261, 472, 674
AflIII	ACRYGT	2 cut(s)	31, 70
AgsI	TTSAA	8 cut(s)	272, 378, 425, 781, 971, 1023, 1168, 1366
AjnI	CCWGG	2 cut(s)	667, 991
AjuI	GAANNNNNNNTTGG	4 cut(s)	128, 160, 1358, 1390
AluBI	AGCT	7 cut(s)	163, 392, 398, 983, 1160, 1181, 1223
AluI	AGCT	7 cut(s)	163, 392, 398, 983, 1160, 1181, 1223
Alw21I	GWGCWC	2 cut(s)	70, 1225
Alw26I	GTCTC	2 cut(s)	677, 921
AlwI	GGATC	6 cut(s)	55, 365, 401, 414, 774, 1129
Ama87I	CYCGRG	2 cut(s)	674, 1310
Aor13HI	TCCGGA	1 cut(s)	452
AoxI	GGCC	2 cut(s)	809, 1267
ApeKI	GCWGC	3 cut(s)	850, 980, 1256
ApoI	RAATTY	8 cut(s)	22, 508, 727, 966, 1018, 1030, 1382, 1432
AseI	ATTAAT	1 cut(s)	957
Asp700I	GAANNNNTTC	1 cut(s)	589
AspLEI	GCGC	2 cut(s)	233, 543
AspS9I	GGNCC	2 cut(s)	1007, 1237
AsuHPI	GGTGA	2 cut(s)	943, 1439
AsuII	TTCGAA	1 cut(s)	20
AvaI	CYCGRG	2 cut(s)	674, 1310
AvaII	GGWCC	2 cut(s)	1007, 1237
BamHI	GGATCC	1 cut(s)	406
BanI	GGYRCC	1 cut(s)	230
BanII	GRGCYC	2 cut(s)	132, 1225
BauI	CACGAG	1 cut(s)	690
BbrPI	CACGTG	1 cut(s)	32
BbsI	GAAGAC	1 cut(s)	163
Bbv12I	GWGCWC	2 cut(s)	70, 1225
BbvI	GCAGC	3 cut(s)	862, 992, 1268
BccI	CCATC	1 cut(s)	418
BceAI	ACGGC	3 cut(s)	218, 244, 280
BcgI	CGANNNNNNTGC	2 cut(s)	271, 305
BciT130I	CCWGG	2 cut(s)	669, 993
BclI	TGATCA	1 cut(s)	886
BcoDI	GTCTC	2 cut(s)	677, 921
BfaI	CTAG	2 cut(s)	395, 743
BfoI	RGCGCY	1 cut(s)	234
BfuAI	ACCTGC	2 cut(s)	670, 1070
BglII	AGATCT	1 cut(s)	799
BisI	GCNGC	3 cut(s)	851, 981, 1257
BlsI	GCNGC	3 cut(s)	852, 982, 1258
BmcAI	AGTACT	1 cut(s)	313
Bme1390I	CCNGG	2 cut(s)	669, 993
Bme18I	GGWCC	2 cut(s)	1007, 1237
BmeT110I	CYCGRG	2 cut(s)	674, 1310
BmgT120I	GGNCC	2 cut(s)	1007, 1237
BmiI	GGNNCC	8 cut(s)	102, 131, 232, 408, 576, 1009, 1239, 1443
BmrFI	CCNGG	2 cut(s)	669, 993
BmrI	ACTGGG	1 cut(s)	434
BmsI	GCATC	1 cut(s)	967
BmuI	ACTGGG	1 cut(s)	434
BpiI	GAAGAC	1 cut(s)	163
BpmI	CTGGAG	2 cut(s)	207, 1167
Bpu14I	TTCGAA	1 cut(s)	20
BpuEI	CTTGAG	2 cut(s)	30, 643
BsaAI	YACGTR	1 cut(s)	32
BsaHI	GRCGYC	1 cut(s)	231
BsaI	GGTCTC	1 cut(s)	677
BsaJI	CCNNGG	3 cut(s)	260, 992, 1309
BsaWI	WCCGGW	1 cut(s)	452
BsaXI	ACNNNNNCTCC	2 cut(s)	205, 235
Bsc4I	CCNNNNNNNGG	3 cut(s)	261, 472, 674
Bse1I	ACTGG	3 cut(s)	178, 440, 565
Bse3DI	GCAATG	2 cut(s)	536, 860
BseAI	TCCGGA	1 cut(s)	452
BseBI	CCWGG	2 cut(s)	669, 993
BseDI	CCNNGG	3 cut(s)	260, 992, 1309
BseGI	GGATG	2 cut(s)	1321, 1384
BseLI	CCNNNNNNNGG	3 cut(s)	261, 472, 674
BseMI	GCAATG	2 cut(s)	536, 860
BseMII	CTCAG	4 cut(s)	269, 462, 1076, 1142
BseNI	ACTGG	3 cut(s)	178, 440, 565
BseRI	GAGGAG	1 cut(s)	1435
BseXI	GCAGC	3 cut(s)	862, 992, 1268
BshFI	GGCC	2 cut(s)	811, 1269
BshNI	GGYRCC	1 cut(s)	230
BsiHKAI	GWGCWC	2 cut(s)	70, 1225
BsiHKCI	CYCGRG	2 cut(s)	674, 1310
BsiSI	CCGG	1 cut(s)	453
BslFI	GGGAC	2 cut(s)	1109, 1223
BslI	CCNNNNNNNGG	3 cut(s)	261, 472, 674
BsmAI	GTCTC	2 cut(s)	677, 921
BsmFI	GGGAC	2 cut(s)	1109, 1223
BsnI	GGCC	2 cut(s)	811, 1269
Bso31I	GGTCTC	1 cut(s)	677
BsoBI	CYCGRG	2 cut(s)	674, 1310
Bsp119I	TTCGAA	1 cut(s)	20
Bsp1286I	GDGCHC	3 cut(s)	70, 132, 1225
Bsp13I	TCCGGA	1 cut(s)	452
Bsp143I	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
BspACI	CCGC	5 cut(s)	142, 186, 944, 1295, 1425
BspANI	GGCC	2 cut(s)	811, 1269
BspCNI	CTCAG	4 cut(s)	270, 463, 1075, 1141
BspEI	TCCGGA	1 cut(s)	452
BspLI	GGNNCC	8 cut(s)	102, 131, 232, 408, 576, 1009, 1239, 1443
BspMI	ACCTGC	2 cut(s)	670, 1070
BspPI	GGATC	6 cut(s)	55, 365, 401, 414, 774, 1129
BspT104I	TTCGAA	1 cut(s)	20
BspT107I	GGYRCC	1 cut(s)	230
BspTNI	GGTCTC	1 cut(s)	677
BsrBI	CCGCTC	1 cut(s)	1425
BsrDI	GCAATG	2 cut(s)	536, 860
BsrI	ACTGG	3 cut(s)	178, 440, 565
BssECI	CCNNGG	3 cut(s)	260, 992, 1309
BssMI	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
BssNI	GRCGYC	1 cut(s)	231
BssSI	CACGAG	1 cut(s)	690
BssT1I	CCWWGG	1 cut(s)	260
Bst2BI	CACGAG	1 cut(s)	690
Bst2UI	CCWGG	2 cut(s)	669, 993
Bst4CI	ACNGT	4 cut(s)	14, 901, 1001, 1111
Bst6I	CTCTTC	1 cut(s)	467
BstACI	GRCGYC	1 cut(s)	231
BstBAI	YACGTR	1 cut(s)	32
BstBI	TTCGAA	1 cut(s)	20
BstC8I	GCNNGC	2 cut(s)	190, 1267
BstDEI	CTNAG	5 cut(s)	278, 471, 839, 1062, 1128
BstF5I	GGATG	2 cut(s)	1321, 1384
BstH2I	RGCGCY	1 cut(s)	234
BstHHI	GCGC	2 cut(s)	233, 543
BstKTI	GATC	8 cut(s)	63, 373, 409, 757, 769, 802, 889, 1137
BstMAI	GTCTC	2 cut(s)	677, 921
BstMBI	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
BstMWI	GCNNNNNNNGC	4 cut(s)	301, 341, 758, 1262
BstNI	CCWGG	2 cut(s)	669, 993
BstNSI	RCATGY	2 cut(s)	74, 181
BstSCI	CCNGG	2 cut(s)	667, 991
BstV1I	GCAGC	3 cut(s)	862, 992, 1268
BstV2I	GAAGAC	1 cut(s)	163
BstX2I	RGATCY	3 cut(s)	406, 766, 799
BstYI	RGATCY	3 cut(s)	406, 766, 799
BsuRI	GGCC	2 cut(s)	811, 1269
BtsCI	GGATG	2 cut(s)	1321, 1384
BtsIMutI	CAGTG	2 cut(s)	468, 1006
BveI	ACCTGC	2 cut(s)	670, 1070
Cac8I	GCNNGC	2 cut(s)	190, 1267
CfoI	GCGC	2 cut(s)	233, 543
Cfr13I	GGNCC	2 cut(s)	1007, 1237
Csp6I	GTAC	5 cut(s)	312, 358, 382, 719, 1071
CviAII	CATG	4 cut(s)	71, 178, 355, 638
CviQI	GTAC	5 cut(s)	312, 358, 382, 719, 1071
DdeI	CTNAG	5 cut(s)	278, 471, 839, 1062, 1128
DinI	GGCGCC	1 cut(s)	232
DpnI	GATC	8 cut(s)	62, 372, 408, 756, 768, 801, 888, 1136
DpnII	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
Eam1104I	CTCTTC	1 cut(s)	467
EarI	CTCTTC	1 cut(s)	467
Ecl136II	GAGCTC	1 cut(s)	1223
Eco130I	CCWWGG	1 cut(s)	260
Eco147I	AGGCCT	1 cut(s)	811
Eco24I	GRGCYC	2 cut(s)	132, 1225
Eco31I	GGTCTC	1 cut(s)	677
Eco32I	GATATC	1 cut(s)	289
Eco47I	GGWCC	2 cut(s)	1007, 1237
Eco53kI	GAGCTC	1 cut(s)	1223
Eco57I	CTGAAG	1 cut(s)	816
Eco72I	CACGTG	1 cut(s)	32
Eco88I	CYCGRG	2 cut(s)	674, 1310
EcoICRI	GAGCTC	1 cut(s)	1223
EcoO109I	RGGNCCY	2 cut(s)	1007, 1237
EcoRI	GAATTC	1 cut(s)	966
EcoRII	CCWGG	2 cut(s)	667, 991
EcoRV	GATATC	1 cut(s)	289
EcoT14I	CCWWGG	1 cut(s)	260
EcoT38I	GRGCYC	2 cut(s)	132, 1225
EgeI	GGCGCC	1 cut(s)	232
EheI	GGCGCC	1 cut(s)	232
ErhI	CCWWGG	1 cut(s)	260
FaeI	CATG	4 cut(s)	74, 181, 358, 641
FalI	AAGNNNNNCTT	4 cut(s)	128, 160, 319, 351
FaqI	GGGAC	2 cut(s)	1109, 1223
FatI	CATG	4 cut(s)	70, 177, 354, 637
FauI	CCCGC	3 cut(s)	149, 937, 1288
FbaI	TGATCA	1 cut(s)	886
Fnu4HI	GCNGC	3 cut(s)	851, 981, 1257
FokI	GGATG	2 cut(s)	1328, 1391
FriOI	GRGCYC	2 cut(s)	132, 1225
Fsp4HI	GCNGC	3 cut(s)	851, 981, 1257
FspBI	CTAG	2 cut(s)	395, 743
GlaI	GCGC	2 cut(s)	232, 542
GluI	GCNGC	3 cut(s)	851, 981, 1257
GsuI	CTGGAG	2 cut(s)	207, 1167
HaeII	RGCGCY	1 cut(s)	234
HaeIII	GGCC	2 cut(s)	811, 1269
HapII	CCGG	1 cut(s)	453
HhaI	GCGC	2 cut(s)	233, 543
Hin1I	GRCGYC	1 cut(s)	231
Hin1II	CATG	4 cut(s)	74, 181, 358, 641
Hin6I	GCGC	2 cut(s)	231, 541
HinP1I	GCGC	2 cut(s)	231, 541
HincII	GTYRAC	3 cut(s)	520, 697, 1333
HindII	GTYRAC	3 cut(s)	520, 697, 1333
HinfI	GANTC	4 cut(s)	93, 197, 922, 948
HpaI	GTTAAC	3 cut(s)	520, 697, 1333
HpaII	CCGG	1 cut(s)	453
HphI	GGTGA	2 cut(s)	943, 1439
Hpy166II	GTNNAC	4 cut(s)	520, 697, 917, 1333
Hpy188I	TCNGA	7 cut(s)	65, 196, 705, 712, 796, 1065, 1419
Hpy8I	GTNNAC	4 cut(s)	520, 697, 917, 1333
HpyAV	CCTTC	7 cut(s)	253, 384, 575, 707, 757, 775, 1255
HpyCH4III	ACNGT	4 cut(s)	14, 901, 1001, 1111
HpyCH4IV	ACGT	1 cut(s)	31
HpyCH4V	TGCA	7 cut(s)	117, 653, 689, 980, 1052, 1196, 1256
HpyF10VI	GCNNNNNNNGC	4 cut(s)	301, 341, 758, 1262
HpyF3I	CTNAG	5 cut(s)	278, 471, 839, 1062, 1128
HpySE526I	ACGT	1 cut(s)	31
Hsp92I	GRCGYC	1 cut(s)	231
Hsp92II	CATG	4 cut(s)	74, 181, 358, 641
HspAI	GCGC	2 cut(s)	231, 541
KasI	GGCGCC	1 cut(s)	230
Kpn2I	TCCGGA	1 cut(s)	452
Ksp22I	TGATCA	1 cut(s)	886
KspAI	GTTAAC	3 cut(s)	520, 697, 1333
Kzo9I	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
LmnI	GCTCC	5 cut(s)	100, 135, 1186, 1220, 1422
Lsp1109I	GCAGC	3 cut(s)	862, 992, 1268
LweI	GCATC	1 cut(s)	967
MaeI	CTAG	2 cut(s)	395, 743
MaeII	ACGT	1 cut(s)	31
MaeIII	GTNAC	8 cut(s)	27, 415, 430, 532, 556, 625, 949, 1298
MalI	GATC	8 cut(s)	62, 372, 408, 756, 768, 801, 888, 1136
MbiI	CCGCTC	1 cut(s)	1425
MboI	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
MboII	GAAGA	7 cut(s)	165, 168, 437, 454, 511, 809, 825
MfeI	CAATTG	2 cut(s)	420, 864
MflI	RGATCY	3 cut(s)	406, 766, 799
MhlI	GDGCHC	3 cut(s)	70, 132, 1225
Mly113I	GGCGCC	1 cut(s)	231
MlyI	GAGTC	2 cut(s)	87, 957
MmeI	TCCRAC	3 cut(s)	70, 883, 1306
MroI	TCCGGA	1 cut(s)	452
MroXI	GAANNNNTTC	1 cut(s)	589
MseI	TTAA	7 cut(s)	519, 552, 696, 957, 1332, 1347, 1409
MspI	CCGG	1 cut(s)	453
MspR9I	CCNGG	2 cut(s)	669, 993
MunI	CAATTG	2 cut(s)	420, 864
MvaI	CCWGG	2 cut(s)	669, 993
MwoI	GCNNNNNNNGC	4 cut(s)	301, 341, 758, 1262
NarI	GGCGCC	1 cut(s)	231
NdeII	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
NlaIII	CATG	4 cut(s)	74, 181, 358, 641
NlaIV	GGNNCC	8 cut(s)	102, 131, 232, 408, 576, 1009, 1239, 1443
NmuCI	GTSAC	2 cut(s)	27, 949
NspI	RCATGY	2 cut(s)	74, 181
NspV	TTCGAA	1 cut(s)	20
PaqCI	CACCTGC	1 cut(s)	1070
PceI	AGGCCT	1 cut(s)	811
PciI	ACATGT	1 cut(s)	70
PcsI	WCGNNNNNNNCGW	1 cut(s)	576
PdmI	GAANNNNTTC	1 cut(s)	589
PfeI	GAWTC	2 cut(s)	197, 922
PkrI	GCNGC	3 cut(s)	852, 982, 1258
PleI	GAGTC	2 cut(s)	87, 956
PluTI	GGCGCC	1 cut(s)	234
PmaCI	CACGTG	1 cut(s)	32
PmlI	CACGTG	1 cut(s)	32
PpsI	GAGTC	2 cut(s)	87, 956
Ppu21I	YACGTR	1 cut(s)	32
PpuMI	RGGWCCY	2 cut(s)	1007, 1237
PscI	ACATGT	1 cut(s)	70
PshBI	ATTAAT	1 cut(s)	957
Psp124BI	GAGCTC	1 cut(s)	1225
Psp5II	RGGWCCY	2 cut(s)	1007, 1237
Psp6I	CCWGG	2 cut(s)	667, 991
PspCI	CACGTG	1 cut(s)	32
PspGI	CCWGG	2 cut(s)	667, 991
PspN4I	GGNNCC	8 cut(s)	102, 131, 232, 408, 576, 1009, 1239, 1443
PspPI	GGNCC	2 cut(s)	1007, 1237
PspPPI	RGGWCCY	2 cut(s)	1007, 1237
PsuI	RGATCY	3 cut(s)	406, 766, 799
RsaI	GTAC	5 cut(s)	313, 359, 383, 720, 1072
RsaNI	GTAC	5 cut(s)	312, 358, 382, 719, 1071
SacI	GAGCTC	1 cut(s)	1225
SaqAI	TTAA	7 cut(s)	519, 552, 696, 957, 1332, 1347, 1409
SatI	GCNGC	3 cut(s)	851, 981, 1257
Sau3AI	GATC	8 cut(s)	60, 370, 406, 754, 766, 799, 886, 1134
Sau96I	GGNCC	2 cut(s)	1007, 1237
ScaI	AGTACT	1 cut(s)	313
SchI	GAGTC	2 cut(s)	87, 957
ScrFI	CCNGG	2 cut(s)	669, 993
SduI	GDGCHC	3 cut(s)	70, 132, 1225
SfaNI	GCATC	1 cut(s)	967
SfoI	GGCGCC	1 cut(s)	232
SfuI	TTCGAA	1 cut(s)	20
SinI	GGWCC	2 cut(s)	1007, 1237
SmlI	CTYRAG	2 cut(s)	45, 658
SmoI	CTYRAG	2 cut(s)	45, 658
SseBI	AGGCCT	1 cut(s)	811
SsiI	CCGC	5 cut(s)	142, 186, 944, 1295, 1425
SspDI	GGCGCC	1 cut(s)	230
SspI	AATATT	3 cut(s)	1056, 1414, 1452
SspMI	CTAG	2 cut(s)	395, 743
SstI	GAGCTC	1 cut(s)	1225
StuI	AGGCCT	1 cut(s)	811
StyD4I	CCNGG	2 cut(s)	667, 991
StyI	CCWWGG	1 cut(s)	260
TaaI	ACNGT	4 cut(s)	14, 901, 1001, 1111
TaiI	ACGT	1 cut(s)	34
TaqI	TCGA	6 cut(s)	20, 291, 528, 570, 925, 1156
TatI	WGTACW	2 cut(s)	311, 357
TfiI	GAWTC	2 cut(s)	197, 922
Tru1I	TTAA	7 cut(s)	519, 552, 696, 957, 1332, 1347, 1409
Tru9I	TTAA	7 cut(s)	519, 552, 696, 957, 1332, 1347, 1409
TscAI	CASTG	2 cut(s)	475, 1006
TseFI	GTSAC	2 cut(s)	27, 949
TseI	GCWGC	3 cut(s)	850, 980, 1256
Tsp45I	GTSAC	2 cut(s)	27, 949
TspDTI	ATGAA	4 cut(s)	136, 343, 1395, 1458
TspRI	CASTG	2 cut(s)	475, 1006
VpaK11BI	GGWCC	2 cut(s)	1007, 1237
VspI	ATTAAT	1 cut(s)	957
XapI	RAATTY	8 cut(s)	22, 508, 727, 966, 1018, 1030, 1382, 1432
XceI	RCATGY	2 cut(s)	74, 181
XmnI	GAANNNNTTC	1 cut(s)	589
XspI	CTAG	2 cut(s)	395, 743
ZrmI	AGTACT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.