Condensin II non structural maintenance of chromosomes subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0138441 |
| rosa_multiflora | Rmu_sc0001534.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00106240 |
| rosa_samantha | Rh2AG399000 Rh2BG407100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 485 |
| AciI | CCGC | 2 cut(s) | 266, 811 |
| AclWI | GGATC | 1 cut(s) | 340 |
| AcuI | CTGAAG | 2 cut(s) | 42, 717 |
| AfaI | GTAC | 1 cut(s) | 448 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 246 |
| AflIII | ACRYGT | 1 cut(s) | 217 |
| AgsI | TTSAA | 3 cut(s) | 430, 640, 767 |
| AjnI | CCWGG | 1 cut(s) | 278 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 311, 343 |
| AluBI | AGCT | 5 cut(s) | 206, 645, 680, 701, 722 |
| AluI | AGCT | 5 cut(s) | 206, 645, 680, 701, 722 |
| AlwI | GGATC | 1 cut(s) | 340 |
| ApeKI | GCWGC | 2 cut(s) | 659, 814 |
| AsuHPI | GGTGA | 3 cut(s) | 229, 643, 696 |
| BbvI | GCAGC | 1 cut(s) | 671 |
| BccI | CCATC | 1 cut(s) | 62 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 509, 543 |
| BciT130I | CCWGG | 1 cut(s) | 280 |
| BfaI | CTAG | 2 cut(s) | 344, 677 |
| BfmI | CTRYAG | 1 cut(s) | 98 |
| BisI | GCNGC | 4 cut(s) | 267, 660, 812, 815 |
| BlsI | GCNGC | 4 cut(s) | 268, 661, 813, 816 |
| Bme1390I | CCNGG | 1 cut(s) | 280 |
| BmrFI | CCNGG | 1 cut(s) | 280 |
| BmsI | GCATC | 2 cut(s) | 49, 679 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 19, 51 |
| BpmI | CTGGAG | 2 cut(s) | 29, 696 |
| BpuEI | CTTGAG | 1 cut(s) | 172 |
| BsaJI | CCNNGG | 1 cut(s) | 375 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 246 |
| Bse1I | ACTGG | 1 cut(s) | 240 |
| BseBI | CCWGG | 1 cut(s) | 280 |
| BseDI | CCNNGG | 1 cut(s) | 375 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 246 |
| BseMII | CTCAG | 1 cut(s) | 329 |
| BseNI | ACTGG | 1 cut(s) | 240 |
| BseRI | GAGGAG | 1 cut(s) | 641 |
| BseXI | GCAGC | 1 cut(s) | 671 |
| BslFI | GGGAC | 1 cut(s) | 305 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 246 |
| BsmFI | GGGAC | 1 cut(s) | 305 |
| BsmI | GAATGC | 1 cut(s) | 384 |
| Bsp1407I | TGTACA | 1 cut(s) | 446 |
| Bsp143I | GATC | 3 cut(s) | 332, 588, 727 |
| BspACI | CCGC | 2 cut(s) | 266, 811 |
| BspCNI | CTCAG | 1 cut(s) | 328 |
| BspMAI | CTGCAG | 1 cut(s) | 102 |
| BspPI | GGATC | 1 cut(s) | 340 |
| BsrGI | TGTACA | 1 cut(s) | 446 |
| BsrI | ACTGG | 1 cut(s) | 240 |
| BssECI | CCNNGG | 1 cut(s) | 375 |
| BssMI | GATC | 3 cut(s) | 332, 588, 727 |
| Bst2UI | CCWGG | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 2 cut(s) | 483, 806 |
| BstAUI | TGTACA | 1 cut(s) | 446 |
| BstC8I | GCNNGC | 1 cut(s) | 394 |
| BstDEI | CTNAG | 2 cut(s) | 315, 507 |
| BstKTI | GATC | 3 cut(s) | 335, 591, 730 |
| BstMBI | GATC | 3 cut(s) | 332, 588, 727 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 13, 89, 275, 698 |
| BstNI | CCWGG | 1 cut(s) | 280 |
| BstNSI | RCATGY | 3 cut(s) | 221, 396, 572 |
| BstSCI | CCNGG | 1 cut(s) | 278 |
| BstSFI | CTRYAG | 1 cut(s) | 98 |
| BstV1I | GCAGC | 1 cut(s) | 671 |
| BstX2I | RGATCY | 1 cut(s) | 332 |
| BstYI | RGATCY | 1 cut(s) | 332 |
| BtgZI | GCGATG | 1 cut(s) | 472 |
| BtsI | GCAGTG | 1 cut(s) | 142 |
| BtsIMutI | CAGTG | 2 cut(s) | 142, 591 |
| Cac8I | GCNNGC | 1 cut(s) | 394 |
| Csp6I | GTAC | 1 cut(s) | 447 |
| CviAII | CATG | 6 cut(s) | 218, 393, 434, 512, 569, 656 |
| CviQI | GTAC | 1 cut(s) | 447 |
| DdeI | CTNAG | 2 cut(s) | 315, 507 |
| DpnI | GATC | 3 cut(s) | 334, 590, 729 |
| DpnII | GATC | 3 cut(s) | 332, 588, 727 |
| Eco57I | CTGAAG | 2 cut(s) | 42, 717 |
| EcoRII | CCWGG | 1 cut(s) | 278 |
| EcoT22I | ATGCAT | 1 cut(s) | 398 |
| FaeI | CATG | 6 cut(s) | 221, 396, 437, 515, 572, 659 |
| FaqI | GGGAC | 1 cut(s) | 305 |
| FatI | CATG | 6 cut(s) | 217, 392, 433, 511, 568, 655 |
| FblI | GTMKAC | 1 cut(s) | 485 |
| Fnu4HI | GCNGC | 4 cut(s) | 267, 660, 812, 815 |
| Fsp4HI | GCNGC | 4 cut(s) | 267, 660, 812, 815 |
| FspBI | CTAG | 2 cut(s) | 344, 677 |
| GluI | GCNGC | 4 cut(s) | 267, 660, 812, 815 |
| GsuI | CTGGAG | 2 cut(s) | 29, 696 |
| Hin1II | CATG | 6 cut(s) | 221, 396, 437, 515, 572, 659 |
| HindIII | AAGCTT | 2 cut(s) | 699, 720 |
| HinfI | GANTC | 5 cut(s) | 293, 347, 403, 430, 503 |
| HphI | GGTGA | 3 cut(s) | 229, 643, 696 |
| Hpy166II | GTNNAC | 1 cut(s) | 486 |
| Hpy188I | TCNGA | 6 cut(s) | 22, 318, 376, 408, 502, 727 |
| Hpy188III | TCNNGA | 4 cut(s) | 344, 477, 539, 760 |
| Hpy8I | GTNNAC | 1 cut(s) | 486 |
| HpyAV | CCTTC | 3 cut(s) | 168, 313, 658 |
| HpyCH4III | ACNGT | 2 cut(s) | 483, 806 |
| HpyCH4V | TGCA | 4 cut(s) | 100, 396, 530, 659 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 13, 89, 275, 698 |
| HpyF3I | CTNAG | 2 cut(s) | 315, 507 |
| Hsp92II | CATG | 6 cut(s) | 221, 396, 437, 515, 572, 659 |
| Kzo9I | GATC | 3 cut(s) | 332, 588, 727 |
| LmnI | GCTCC | 1 cut(s) | 650 |
| Lsp1109I | GCAGC | 1 cut(s) | 671 |
| LweI | GCATC | 2 cut(s) | 49, 679 |
| MaeI | CTAG | 2 cut(s) | 344, 677 |
| MaeIII | GTNAC | 2 cut(s) | 235, 666 |
| MalI | GATC | 3 cut(s) | 334, 590, 729 |
| MboI | GATC | 3 cut(s) | 332, 588, 727 |
| MboII | GAAGA | 1 cut(s) | 644 |
| MflI | RGATCY | 1 cut(s) | 332 |
| MluCI | AATT | 5 cut(s) | 40, 141, 442, 615, 767 |
| MlyI | GAGTC | 1 cut(s) | 287 |
| MmeI | TCCRAC | 1 cut(s) | 396 |
| MnlI | CCTC | 9 cut(s) | 21, 199, 244, 370, 570, 583, 619, 622, 720 |
| Mph1103I | ATGCAT | 1 cut(s) | 398 |
| MseI | TTAA | 7 cut(s) | 126, 144, 362, 441, 672, 684, 752 |
| MslI | CAYNNNNRTG | 2 cut(s) | 216, 222 |
| MspR9I | CCNGG | 1 cut(s) | 280 |
| Mva1269I | GAATGC | 1 cut(s) | 384 |
| MvaI | CCWGG | 1 cut(s) | 280 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 13, 89, 275, 698 |
| NdeII | GATC | 3 cut(s) | 332, 588, 727 |
| NlaIII | CATG | 6 cut(s) | 221, 396, 437, 515, 572, 659 |
| NmuCI | GTSAC | 1 cut(s) | 235 |
| NsiI | ATGCAT | 1 cut(s) | 398 |
| NspI | RCATGY | 3 cut(s) | 221, 396, 572 |
| PaeI | GCATGC | 1 cut(s) | 396 |
| PciI | ACATGT | 1 cut(s) | 217 |
| PctI | GAATGC | 1 cut(s) | 384 |
| PfeI | GAWTC | 4 cut(s) | 347, 403, 430, 503 |
| PkrI | GCNGC | 4 cut(s) | 268, 661, 813, 816 |
| PleI | GAGTC | 1 cut(s) | 287 |
| PpsI | GAGTC | 1 cut(s) | 287 |
| PscI | ACATGT | 1 cut(s) | 217 |
| Psp6I | CCWGG | 1 cut(s) | 278 |
| PspGI | CCWGG | 1 cut(s) | 278 |
| PstI | CTGCAG | 1 cut(s) | 102 |
| PsuI | RGATCY | 1 cut(s) | 332 |
| RsaI | GTAC | 1 cut(s) | 448 |
| RsaNI | GTAC | 1 cut(s) | 447 |
| RseI | CAYNNNNRTG | 2 cut(s) | 216, 222 |
| SaqAI | TTAA | 7 cut(s) | 126, 144, 362, 441, 672, 684, 752 |
| SatI | GCNGC | 4 cut(s) | 267, 660, 812, 815 |
| Sau3AI | GATC | 3 cut(s) | 332, 588, 727 |
| SchI | GAGTC | 1 cut(s) | 287 |
| ScrFI | CCNGG | 1 cut(s) | 280 |
| SfaNI | GCATC | 2 cut(s) | 49, 679 |
| SfcI | CTRYAG | 1 cut(s) | 98 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 216, 222 |
| SmlI | CTYRAG | 1 cut(s) | 151 |
| SmoI | CTYRAG | 1 cut(s) | 151 |
| SphI | GCATGC | 1 cut(s) | 396 |
| Sse9I | AATT | 5 cut(s) | 40, 141, 442, 615, 767 |
| SsiI | CCGC | 2 cut(s) | 266, 811 |
| SspMI | CTAG | 2 cut(s) | 344, 677 |
| StyD4I | CCNGG | 1 cut(s) | 278 |
| TaaI | ACNGT | 2 cut(s) | 483, 806 |
| TaqI | TCGA | 2 cut(s) | 208, 761 |
| TaqII | GACCGA | 1 cut(s) | 425 |
| TasI | AATT | 5 cut(s) | 40, 141, 442, 615, 767 |
| TatI | WGTACW | 1 cut(s) | 446 |
| TauI | GCSGC | 2 cut(s) | 269, 814 |
| TfiI | GAWTC | 4 cut(s) | 347, 403, 430, 503 |
| Tru1I | TTAA | 7 cut(s) | 126, 144, 362, 441, 672, 684, 752 |
| Tru9I | TTAA | 7 cut(s) | 126, 144, 362, 441, 672, 684, 752 |
| TscAI | CASTG | 2 cut(s) | 142, 598 |
| TseFI | GTSAC | 1 cut(s) | 235 |
| TseI | GCWGC | 2 cut(s) | 659, 814 |
| Tsp45I | GTSAC | 1 cut(s) | 235 |
| TspDTI | ATGAA | 1 cut(s) | 416 |
| TspRI | CASTG | 2 cut(s) | 142, 598 |
| XbaI | TCTAGA | 1 cut(s) | 343 |
| XceI | RCATGY | 3 cut(s) | 221, 396, 572 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 128 |
| XmiI | GTMKAC | 1 cut(s) | 485 |
| XspI | CTAG | 2 cut(s) | 344, 677 |
| Zsp2I | ATGCAT | 1 cut(s) | 398 |