Rroxscaffold_2G00107010

Glycosyl-transferase family 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0006323
Physical Location & Seq
Forward (+)
30703100 .. 30708540
5441 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00107010.1

Sequence Viewer

Length: 2160 bp
ATGGAGGAAGCCAGTAAAGGAGACTATAAGTCATCGAGGGGAGTTGGAAGTTTTAAGTCTGCATTGTCAGGGCGATCAAGTCCGCGAAACTCTCCCTCATTTCGGAGATTGCACTCAGGCCGTACTCCCCGAAGAGAAGCTAGAACAAGTGGAGGTGTACAGTGGTTTCGGAGCAATCGGTTACTGTTTTGGTTGTTATTGATTACTCTTTGGGCTTATCTTGGATTTTATTTTCAGTCAAGTTGGGCTCATAGCAATAACAAGGAGAAGAACTTTCTGGGGGTTGGAAATGAAGCAAGCAATGAGAAGCCAGATGATTTGCTTGTCAATGACAGTCCCGTGGCACTGAAGAATGAGACTGGTCAAATTCAACCGAAAGCTGGTAAAAGCATAGACGTGGTTTTGGCAAAAAAAGATGATGGAGTTGCATCTCGTAGGAGCCTGAGTTCAAAGAAGAAGAGTAAGAAATCATCTCGTGGTAAAGCTCGTGGAAAGCCGAAGAAAACTGTGGAGTTTGAAGTCCATGACATGGAGGAGCAGGAACCGGACCTTCCCAAGACCAATACATCTTATGGGATGCTTGTTGGTCCATTTGGTTCTGCGGAGGATAGAATTCTGGAATGGAGTCCTAAAATACGATCTGGAACCTGTGACAGGAAGGGGGACTTTGCACGTCTTGTATGGTCAAGGAGATTTCTGTTAATATTCCATGAACTTTCAATGACTGGGGCACCCCTTTCAATGATGGAGCTGGCAACAGAGCTTTTGAGCTGTGGAGCCACAGTTTCTGCTGTAGTTCTTAGCAAGAAGGGTGGCTTGATGCCAGAGCTTACTAGGAGAAAAATCAAGGTGCTTGAAGACAAAGTAGATCATAGCTTCAAAACTGCCATGAAACAAGATCTCGTTATTGCCGGGTCAGCAGTCTGTGCATCATGGATCGATCAATACATTGATAAGTTCCCAGCTGGTGCCAGTCAAATTGCTTGGTGGATCATGGAAAACCGGAGAGAATACTTTGATAGGGCAAAGGTTGTGCTGGACCGAGTGAAAATGCTGGCTTTTCTATCAGAATCACAGTCAAAACAATGGCTAGAGTGGTGTGAAGAAGAAAAGATTAAGCTGAGGTCTCAGCCGGCAGTTGTGCCACTCTCTATTAATGATGAACTAGCATTTGTAGCTGGTATAGGTTGTTCGCTTAATACTCCATCTTCTAGTACTGAGAAGATGCTAGAGAAAAGGCAGTTATTGCGAGATGCAGTCAGGAAGGAGATGGGGTTAACAGATAATGATATGCTTGTGATATCTCTAAGCAGTATAAACCCTGGAAAGGGTCAGCTCTTGTTTCTGAACTCAGCACGCTTGGTGATAGAAGAAGAACCTCAGCCAGATAATTCTAAGATAAAAAATGCTGTACGTAAGGGTCGAGTCCGTTCTGCCTTGGCTAAAAAGCATCACTTAAGAGCTTTGCTTCAAGGAATGAATGATCATGGTGTATTATCAAATGGATTTCCACTGTCCACACTGTCCACTGAATCTAGTGTCCACTTGAAAGAAGACCAGAAGAAACATTTGCTGTTACATAATCGCTTTGCCTCTGTTGATGATACAGATGCCTTGAACTTCGATGTCACTCACAAAAGGAAAGTGTTGGCAGATAATGGAGGAACAGTGAAACAATCTGCTAAATTTCTTATTGGTTCTGTTGGATCTAAGAGCAATAAGGTGGTTTATGTCAAAGAACTTTTAAGTTTTCTATCTCAGCATTCAAACTTGTCAAAGTCGGTGCTGTGGACTCCCGCAACCACGCGTGTAGCCGCACTATACTCTGCAGCTGATGTTTATGTCATGAACTCTCAGGGTCTGGGAGAAACTTTTGGGAGAGTGACAATTGAAGCCATGGCATTTGGTCTTCCGGTGCTTGGAACAGATGCTGGGGGCACAAAAGAGATTGTTGACCATAATGTGACAGGTCTGCTTCATCCTCTGGGGCATCCCGGTACTCCAGTCCTAGCTAAAAATCTCCGGTTTTTGCTGAAAAACCCAGAATTAAGGAAGCAAATGGGATTGAAAGGAAGAGAAAAGGTAGTGAGGATGTACCTAAAGCGGCACATGTACAAGAAATTTGTTGGCGTTCTTCTCAAGTGCATGAGACCCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0016740 GO:0016757
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_trans_4_5 Glycos_transf_1

Protein Analysis

719

Amino Acids

80.09

Weight (kDa)

9.83

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_trans_4_5 PF16994 228 - 397 6.7e-77 Glycosyl-transferase family 4
Glyco_trans_1_4 PF13692 574 - 679 6e-17 Glycosyl transferases group 1
Glycos_transf_1 PF00534 581 - 693 5.9e-21 Glycosyl transferases group 1
Glyco_trans_1_2 PF13524 601 - 708 6.6e-06 Glycosyl transferase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 730, 968
AccB7I CCANNNNNTGG 1 cut(s) 529
AccII CGCG 2 cut(s) 85, 1807
AciI CCGC 5 cut(s) 83, 602, 1797, 1815, 2104
AclWI GGATC 3 cut(s) 944, 998, 1714
AcsI RAATTY 4 cut(s) 366, 612, 1685, 2120
AcuI CTGAAG 1 cut(s) 368
AfaI GTAC 7 cut(s) 124, 159, 1216, 1413, 1999, 2096, 2114
AfiI CCNNNNNNNGG 7 cut(s) 102, 380, 529, 654, 1327, 1328, 1919
AflII CTTAAG 1 cut(s) 1456
AflIII ACRYGT 2 cut(s) 1805, 2109
AhdI GACNNNNNGTC 1 cut(s) 28
AjiI CACGTC 2 cut(s) 397, 674
AjnI CCWGG 1 cut(s) 1321
AloI GAACNNNNNNTCC 2 cut(s) 430, 462
Alw26I GTCTC 4 cut(s) 15, 350, 1131, 2143
AlwI GGATC 3 cut(s) 944, 998, 1714
AlwNI CAGNNNCTG 3 cut(s) 788, 1861, 1931
AoxI GGCC 1 cut(s) 118
ApeKI GCWGC 1 cut(s) 1829
ApoI RAATTY 4 cut(s) 366, 612, 1685, 2120
AseI ATTAAT 1 cut(s) 1155
AspS9I GGNCC 3 cut(s) 547, 587, 1039
AsuC2I CCSGG 2 cut(s) 913, 1995
AsuHPI GGTGA 1 cut(s) 1375
AvaII GGWCC 3 cut(s) 547, 587, 1039
BaeGI GKGCMC 2 cut(s) 733, 1940
BaeI ACNNNNGTAYC 2 cut(s) 1989, 2022
BanI GGYRCC 2 cut(s) 730, 968
BanII GRGCYC 1 cut(s) 250
BauI CACGAG 2 cut(s) 474, 486
BbsI GAAGAC 3 cut(s) 864, 1560, 1901
BbvCI CCTCAGC 2 cut(s) 1121, 1380
BbvI GCAGC 1 cut(s) 1841
BccI CCATC 4 cut(s) 413, 739, 1213, 1264
BceAI ACGGC 1 cut(s) 105
BciT130I CCWGG 1 cut(s) 1323
BclI TGATCA 1 cut(s) 1483
BcnI CCSGG 2 cut(s) 913, 1995
BcoDI GTCTC 4 cut(s) 15, 350, 1131, 2143
BfaI CTAG 8 cut(s) 141, 834, 1091, 1166, 1212, 1229, 1536, 2009
BfmI CTRYAG 2 cut(s) 792, 1827
BfrI CTTAAG 1 cut(s) 1456
BglII AGATCT 1 cut(s) 898
BisI GCNGC 3 cut(s) 1815, 1830, 2105
BlsI GCNGC 3 cut(s) 1816, 1831, 2106
BmcAI AGTACT 1 cut(s) 1216
Bme1390I CCNGG 3 cut(s) 913, 1323, 1995
Bme18I GGWCC 3 cut(s) 547, 587, 1039
BmeRI GACNNNNNGTC 1 cut(s) 28
BmgBI CACGTC 2 cut(s) 397, 674
BmgT120I GGNCC 3 cut(s) 547, 587, 1039
BmiI GGNNCC 6 cut(s) 440, 543, 646, 732, 778, 970
BmrFI CCNGG 3 cut(s) 913, 1323, 1995
BmrI ACTGGG 1 cut(s) 735
BmuI ACTGGG 1 cut(s) 735
BpiI GAAGAC 3 cut(s) 864, 1560, 1901
BpmI CTGGAG 1 cut(s) 1986
Bpu10I CCTNAGC 2 cut(s) 1121, 1380
BpuEI CTTGAG 1 cut(s) 2123
BpuMI CCSGG 2 cut(s) 913, 1995
Bsa29I ATCGAT 1 cut(s) 939
BsaAI YACGTR 1 cut(s) 1415
BsaI GGTCTC 2 cut(s) 1131, 2143
BsaJI CCNNGG 4 cut(s) 339, 1321, 1437, 1896
BsaWI WCCGGW 4 cut(s) 544, 1002, 1912, 2022
BsaXI ACNNNNNCTCC 8 cut(s) 430, 460, 768, 798, 1259, 1289, 1653, 1683
Bsc4I CCNNNNNNNGG 7 cut(s) 102, 380, 529, 654, 1327, 1328, 1919
Bse118I RCCGGY 1 cut(s) 1132
Bse1I ACTGG 5 cut(s) 12, 364, 730, 972, 2003
Bse3DI GCAATG 1 cut(s) 307
BseBI CCWGG 1 cut(s) 1323
BseCI ATCGAT 1 cut(s) 939
BseDI CCNNGG 4 cut(s) 339, 1321, 1437, 1896
BseGI GGATG 4 cut(s) 582, 1978, 1990, 2097
BseLI CCNNNNNNNGG 7 cut(s) 102, 380, 529, 654, 1327, 1328, 1919
BseMI GCAATG 1 cut(s) 307
BseMII CTCAG 9 cut(s) 129, 434, 1112, 1142, 1209, 1365, 1394, 1772, 1868
BseNI ACTGG 5 cut(s) 12, 364, 730, 972, 2003
BseRI GAGGAG 1 cut(s) 548
BseSI GKGCMC 2 cut(s) 733, 1940
BseXI GCAGC 1 cut(s) 1841
BseYI CCCAGC 2 cut(s) 961, 1931
Bsh1236I CGCG 2 cut(s) 85, 1807
BshFI GGCC 1 cut(s) 120
BshNI GGYRCC 2 cut(s) 730, 968
BshVI ATCGAT 1 cut(s) 939
BsiSI CCGG 7 cut(s) 545, 912, 1003, 1133, 1913, 1995, 2023
BslFI GGGAC 2 cut(s) 321, 677
BslI CCNNNNNNNGG 7 cut(s) 102, 380, 529, 654, 1327, 1328, 1919
BsmAI GTCTC 4 cut(s) 15, 350, 1131, 2143
BsmFI GGGAC 2 cut(s) 321, 677
BsmI GAATGC 1 cut(s) 1762
BsnI GGCC 1 cut(s) 120
Bso31I GGTCTC 2 cut(s) 1131, 2143
Bsp1286I GDGCHC 3 cut(s) 250, 733, 1940
Bsp1407I TGTACA 2 cut(s) 157, 2112
Bsp143I GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
Bsp19I CCATGG 1 cut(s) 1896
BspACI CCGC 5 cut(s) 83, 602, 1797, 1815, 2104
BspANI GGCC 1 cut(s) 120
BspCNI CTCAG 9 cut(s) 128, 435, 1113, 1141, 1210, 1364, 1393, 1771, 1867
BspDI ATCGAT 1 cut(s) 939
BspFNI CGCG 2 cut(s) 85, 1807
BspHI TCATGA 1 cut(s) 1845
BspLI GGNNCC 6 cut(s) 440, 543, 646, 732, 778, 970
BspMAI CTGCAG 1 cut(s) 1831
BspPI GGATC 3 cut(s) 944, 998, 1714
BspT107I GGYRCC 2 cut(s) 730, 968
BspTI CTTAAG 1 cut(s) 1456
BspTNI GGTCTC 2 cut(s) 1131, 2143
BsrDI GCAATG 1 cut(s) 307
BsrFI RCCGGY 1 cut(s) 1132
BsrGI TGTACA 2 cut(s) 157, 2112
BsrI ACTGG 5 cut(s) 12, 364, 730, 972, 2003
BssAI RCCGGY 1 cut(s) 1132
BssECI CCNNGG 4 cut(s) 339, 1321, 1437, 1896
BssMI GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
BssSI CACGAG 2 cut(s) 474, 486
BssT1I CCWWGG 2 cut(s) 1437, 1896
Bst2BI CACGAG 2 cut(s) 474, 486
Bst2UI CCWGG 1 cut(s) 1323
Bst4CI ACNGT 9 cut(s) 162, 186, 335, 508, 784, 1077, 1515, 1524, 1669
Bst6I CTCTTC 3 cut(s) 127, 452, 2068
BstAFI CTTAAG 1 cut(s) 1456
BstAPI GCANNNNNTGC 2 cut(s) 926, 1246
BstAUI TGTACA 2 cut(s) 157, 2112
BstBAI YACGTR 1 cut(s) 1415
BstC8I GCNNGC 5 cut(s) 298, 753, 1056, 1134, 1357
BstDSI CCRYGG 2 cut(s) 339, 1896
BstENI CCTNNNNNAGG 1 cut(s) 652
BstF5I GGATG 4 cut(s) 582, 1978, 1990, 2097
BstFNI CGCG 2 cut(s) 85, 1807
BstKTI GATC 9 cut(s) 77, 641, 871, 901, 939, 943, 993, 1486, 1709
BstMAI GTCTC 4 cut(s) 15, 350, 1131, 2143
BstMBI GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
BstMWI GCNNNNNNNGC 4 cut(s) 917, 926, 1175, 1246
BstNI CCWGG 1 cut(s) 1323
BstNSI RCATGY 1 cut(s) 2113
BstSCI CCNGG 3 cut(s) 911, 1321, 1993
BstSFI CTRYAG 2 cut(s) 792, 1827
BstSLI GKGCMC 2 cut(s) 733, 1940
BstSNI TACGTA 1 cut(s) 1415
BstUI CGCG 2 cut(s) 85, 1807
BstV1I GCAGC 1 cut(s) 1841
BstV2I GAAGAC 3 cut(s) 864, 1560, 1901
BstX2I RGATCY 2 cut(s) 898, 1706
BstYI RGATCY 2 cut(s) 898, 1706
Bsu15I ATCGAT 1 cut(s) 939
BsuRI GGCC 1 cut(s) 120
BsuTUI ATCGAT 1 cut(s) 939
BtgI CCRYGG 2 cut(s) 339, 1896
BtrI CACGTC 2 cut(s) 397, 674
BtsCI GGATG 4 cut(s) 582, 1978, 1990, 2097
BtsIMutI CAGTG 6 cut(s) 167, 344, 1511, 1520, 1527, 1674
Cac8I GCNNGC 5 cut(s) 298, 753, 1056, 1134, 1357
CaiI CAGNNNCTG 3 cut(s) 788, 1861, 1931
CciI TCATGA 1 cut(s) 1845
Cfr10I RCCGGY 1 cut(s) 1132
Cfr13I GGNCC 3 cut(s) 547, 587, 1039
ClaI ATCGAT 1 cut(s) 939
Csp6I GTAC 7 cut(s) 123, 158, 1215, 1412, 1998, 2095, 2113
CspCI CAANNNNNGTGG 2 cut(s) 793, 828
CviQI GTAC 7 cut(s) 123, 158, 1215, 1412, 1998, 2095, 2113
DpnI GATC 9 cut(s) 76, 640, 870, 900, 938, 942, 992, 1485, 1708
DpnII GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
DriI GACNNNNNGTC 1 cut(s) 28
Eam1104I CTCTTC 3 cut(s) 127, 452, 2068
Eam1105I GACNNNNNGTC 1 cut(s) 28
EarI CTCTTC 3 cut(s) 127, 452, 2068
Eco105I TACGTA 1 cut(s) 1415
Eco130I CCWWGG 2 cut(s) 1437, 1896
Eco24I GRGCYC 1 cut(s) 250
Eco31I GGTCTC 2 cut(s) 1131, 2143
Eco32I GATATC 1 cut(s) 1302
Eco47I GGWCC 3 cut(s) 547, 587, 1039
Eco57I CTGAAG 1 cut(s) 368
EcoNI CCTNNNNNAGG 1 cut(s) 652
EcoRI GAATTC 1 cut(s) 612
EcoRII CCWGG 1 cut(s) 1321
EcoRV GATATC 1 cut(s) 1302
EcoT14I CCWWGG 2 cut(s) 1437, 1896
EcoT38I GRGCYC 1 cut(s) 250
ErhI CCWWGG 2 cut(s) 1437, 1896
FalI AAGNNNNNCTT 6 cut(s) 650, 682, 800, 832, 1439, 1471
FaqI GGGAC 2 cut(s) 321, 677
FauI CCCGC 1 cut(s) 1804
FbaI TGATCA 1 cut(s) 1483
Fnu4HI GCNGC 3 cut(s) 1815, 1830, 2105
FokI GGATG 4 cut(s) 589, 1965, 1977, 2104
FriOI GRGCYC 1 cut(s) 250
Fsp4HI GCNGC 3 cut(s) 1815, 1830, 2105
FspBI CTAG 8 cut(s) 141, 834, 1091, 1166, 1212, 1229, 1536, 2009
GluI GCNGC 3 cut(s) 1815, 1830, 2105
GsaI CCCAGC 2 cut(s) 965, 1935
GsuI CTGGAG 1 cut(s) 1986
HaeIII GGCC 1 cut(s) 120
HapII CCGG 7 cut(s) 545, 912, 1003, 1133, 1913, 1995, 2023
HincII GTYRAC 2 cut(s) 1278, 1954
HindII GTYRAC 2 cut(s) 1278, 1954
HinfI GANTC 5 cut(s) 625, 1070, 1425, 1532, 1792
HpaI GTTAAC 1 cut(s) 1278
HpaII CCGG 7 cut(s) 545, 912, 1003, 1133, 1913, 1995, 2023
HphI GGTGA 1 cut(s) 1375
Hpy166II GTNNAC 7 cut(s) 158, 1278, 1518, 1527, 1543, 1791, 1954
Hpy188I TCNGA 4 cut(s) 105, 171, 1069, 1347
Hpy188III TCNNGA 4 cut(s) 617, 642, 1261, 1846
Hpy8I GTNNAC 7 cut(s) 158, 1278, 1518, 1527, 1543, 1791, 1954
HpyAV CCTTC 4 cut(s) 560, 652, 802, 1258
HpyCH4III ACNGT 9 cut(s) 162, 186, 335, 508, 784, 1077, 1515, 1524, 1669
HpyCH4IV ACGT 3 cut(s) 396, 673, 1414
HpyCH4V TGCA 8 cut(s) 62, 112, 428, 671, 929, 1256, 1829, 2145
HpyF10VI GCNNNNNNNGC 4 cut(s) 917, 926, 1175, 1246
HpySE526I ACGT 3 cut(s) 396, 673, 1414
KroI GCCGGC 1 cut(s) 1132
KroNI GCCGGC 1 cut(s) 1134
Ksp22I TGATCA 1 cut(s) 1483
KspAI GTTAAC 1 cut(s) 1278
Kzo9I GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
LmnI GCTCC 5 cut(s) 171, 438, 535, 748, 776
Lsp1109I GCAGC 1 cut(s) 1841
MaeI CTAG 8 cut(s) 141, 834, 1091, 1166, 1212, 1229, 1536, 2009
MaeII ACGT 3 cut(s) 396, 673, 1414
MaeIII GTNAC 6 cut(s) 180, 650, 1575, 1627, 1882, 1963
MalI GATC 9 cut(s) 76, 640, 870, 900, 938, 942, 992, 1485, 1708
MboI GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
MfeI CAATTG 1 cut(s) 1887
MflI RGATCY 2 cut(s) 898, 1706
MhlI GDGCHC 3 cut(s) 250, 733, 1940
MluCI AATT 8 cut(s) 366, 612, 978, 1390, 1685, 1887, 2045, 2120
MluI ACGCGT 1 cut(s) 1805
MlyI GAGTC 3 cut(s) 634, 1434, 1786
MmeI TCCRAC 3 cut(s) 25, 265, 1684
MroNI GCCGGC 1 cut(s) 1132
MseI TTAA 9 cut(s) 54, 701, 1116, 1155, 1197, 1277, 1457, 1745, 2048
MslI CAYNNNNRTG 1 cut(s) 395
MspA1I CMGCKG 2 cut(s) 965, 1832
MspCI CTTAAG 1 cut(s) 1456
MspI CCGG 7 cut(s) 545, 912, 1003, 1133, 1913, 1995, 2023
MspR9I CCNGG 3 cut(s) 913, 1323, 1995
MunI CAATTG 1 cut(s) 1887
Mva1269I GAATGC 1 cut(s) 1762
MvaI CCWGG 1 cut(s) 1323
MvnI CGCG 2 cut(s) 85, 1807
MwoI GCNNNNNNNGC 4 cut(s) 917, 926, 1175, 1246
NaeI GCCGGC 1 cut(s) 1134
NciI CCSGG 2 cut(s) 913, 1995
NcoI CCATGG 1 cut(s) 1896
NdeII GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
NgoMIV GCCGGC 1 cut(s) 1132
NlaIV GGNNCC 6 cut(s) 440, 543, 646, 732, 778, 970
NmuCI GTSAC 4 cut(s) 650, 1627, 1882, 1963
NspI RCATGY 1 cut(s) 2113
PagI TCATGA 1 cut(s) 1845
PciI ACATGT 1 cut(s) 2109
PcsI WCGNNNNNNNCGW 1 cut(s) 1420
PctI GAATGC 1 cut(s) 1762
PdiI GCCGGC 1 cut(s) 1134
PfeI GAWTC 2 cut(s) 1070, 1532
PflMI CCANNNNNTGG 1 cut(s) 529
PkrI GCNGC 3 cut(s) 1816, 1831, 2106
PleI GAGTC 3 cut(s) 633, 1433, 1786
PpsI GAGTC 3 cut(s) 633, 1433, 1786
Ppu21I YACGTR 1 cut(s) 1415
PscI ACATGT 1 cut(s) 2109
PshBI ATTAAT 1 cut(s) 1155
Psp6I CCWGG 1 cut(s) 1321
PspFI CCCAGC 2 cut(s) 961, 1931
PspGI CCWGG 1 cut(s) 1321
PspN4I GGNNCC 6 cut(s) 440, 543, 646, 732, 778, 970
PspPI GGNCC 3 cut(s) 547, 587, 1039
PsrI GAACNNNNNNTAC 2 cut(s) 1174, 1206
PstI CTGCAG 1 cut(s) 1831
PstNI CAGNNNCTG 3 cut(s) 788, 1861, 1931
PsuI RGATCY 2 cut(s) 898, 1706
PvuII CAGCTG 2 cut(s) 965, 1832
RsaI GTAC 7 cut(s) 124, 159, 1216, 1413, 1999, 2096, 2114
RsaNI GTAC 7 cut(s) 123, 158, 1215, 1412, 1998, 2095, 2113
RseI CAYNNNNRTG 1 cut(s) 395
SaqAI TTAA 9 cut(s) 54, 701, 1116, 1155, 1197, 1277, 1457, 1745, 2048
SatI GCNGC 3 cut(s) 1815, 1830, 2105
Sau3AI GATC 9 cut(s) 74, 638, 868, 898, 936, 940, 990, 1483, 1706
Sau96I GGNCC 3 cut(s) 547, 587, 1039
ScaI AGTACT 1 cut(s) 1216
SchI GAGTC 3 cut(s) 634, 1434, 1786
ScrFI CCNGG 3 cut(s) 913, 1323, 1995
SduI GDGCHC 3 cut(s) 250, 733, 1940
SfcI CTRYAG 2 cut(s) 792, 1827
SinI GGWCC 3 cut(s) 547, 587, 1039
SmiMI CAYNNNNRTG 1 cut(s) 395
SmlI CTYRAG 2 cut(s) 1456, 2138
SmoI CTYRAG 2 cut(s) 1456, 2138
SnaBI TACGTA 1 cut(s) 1415
Sse9I AATT 8 cut(s) 366, 612, 978, 1390, 1685, 1887, 2045, 2120
SsiI CCGC 5 cut(s) 83, 602, 1797, 1815, 2104
SspI AATATT 1 cut(s) 705
SspMI CTAG 8 cut(s) 141, 834, 1091, 1166, 1212, 1229, 1536, 2009
StyD4I CCNGG 3 cut(s) 911, 1321, 1993
StyI CCWWGG 2 cut(s) 1437, 1896
TaaI ACNGT 9 cut(s) 162, 186, 335, 508, 784, 1077, 1515, 1524, 1669
TaiI ACGT 3 cut(s) 399, 676, 1417
TaqI TCGA 4 cut(s) 35, 939, 1423, 1623
TaqII GACCGA 1 cut(s) 1056
TasI AATT 8 cut(s) 366, 612, 978, 1390, 1685, 1887, 2045, 2120
TatI WGTACW 3 cut(s) 157, 1214, 2112
TauI GCSGC 2 cut(s) 1817, 2107
TfiI GAWTC 2 cut(s) 1070, 1532
Tru1I TTAA 9 cut(s) 54, 701, 1116, 1155, 1197, 1277, 1457, 1745, 2048
Tru9I TTAA 9 cut(s) 54, 701, 1116, 1155, 1197, 1277, 1457, 1745, 2048
TscAI CASTG 6 cut(s) 167, 351, 1518, 1527, 1534, 1674
TseFI GTSAC 4 cut(s) 650, 1627, 1882, 1963
TseI GCWGC 1 cut(s) 1829
Tsp45I GTSAC 4 cut(s) 650, 1627, 1882, 1963
TspDTI ATGAA 7 cut(s) 306, 726, 905, 1176, 1493, 1862, 1967
TspGWI ACGGA 1 cut(s) 1418
TspRI CASTG 6 cut(s) 167, 351, 1518, 1527, 1534, 1674
Van91I CCANNNNNTGG 1 cut(s) 529
Vha464I CTTAAG 1 cut(s) 1456
VpaK11BI GGWCC 3 cut(s) 547, 587, 1039
VspI ATTAAT 1 cut(s) 1155
XagI CCTNNNNNAGG 1 cut(s) 652
XapI RAATTY 4 cut(s) 366, 612, 1685, 2120
XceI RCATGY 1 cut(s) 2113
XspI CTAG 8 cut(s) 141, 834, 1091, 1166, 1212, 1229, 1536, 2009
ZrmI AGTACT 1 cut(s) 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.