Rorug02G0343200

Glycosyl-transferase family 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0006323
Physical Location & Seq
Reverse (-)
42774475 .. 42779625
5151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0343200.1

Sequence Viewer

Length: 3210 bp
ATGTCTGAAGCACTTGTATCCTTCCTTGTAGAGCAGTTGGGTTCCATCATCTTCCAACAGGTGGAACAAAACGTGAGACTTGTTGTGAATGTCAAAAAAGAAGTAGCAACTCTTACCCTCAACCTCGAAACTATTCAAGCTGTGCTGGCGGATGCAGAGAGGAGGCAAGTGAAGGAGGCCAACGTGAGACGCTGGCTCAACAATCTAAAAGAAGTGTCGTACGAGATAGACGATGTGGTGGACGAGTGGAGCACTGAAATCCTGAAAAAACAAATCGAGAAACAAGGTGAAAATGTTGTTGTACCTAAGAAGAAGGTATGTTTCTCTATTCCCTTCCATTGTCTTTGTAATGGACAAGTCACTCAGATAATTTTTCGTCGTGACATTGCTGTGAGGATAAAAGAGTTGAATGAGAAGTTAGCTTTGATTCATGAACAGCGAAAATTTTATAAGTTTCTCGAAAATGAAATAGAATTTGAGCAACCTGAACGATTGAAAAGTTTTTCAATTGTCAATGAATCTGAGACATTTGGTAGAGACTACGAAAGGAATAAACTAGTAAGCCAGTTAGTGAGTGAGAATAGTGAAGAAAGGAAGAAGCCTCTTGTCATATCTATTGTAGGTATGGGGGGGATAGGCAAAACAACTCTTGCCCAACTAGCCTATAATGATGTAAAGGTAAAGAAATGTTTTCATACAAGAATATGGGTTTGTGTCTCAGACCCCTTTGTACAAATTGCTGTTGCCAAAGCCATCCTTGAAAGTCTTAAGGTAATTGTCCCAAATTCAAATGAGTTAGAAACTTATGTTCAACTTATATCTGACTCTATTAAGGGCAAAAAGTTCCTCATTGTCCTAGATGATGTCTGGGACTCAAACCATAGAAAGTGGGAGCCCTTCCTGACCACATTACATAGTGGTGCCTCAGGGAGTAGAATTTTGGTTACAACGCGAATTGCGCAGGTTGCTAGTGCAATGGGAACAACTAGTGACCACACAATCTATATAAAGGAGTTAGGTGAAGAAACTTGTCGGTCATTGTTCTATCACATTGCATTTTTTGGTGGTGAAATAAAGGAGTCTAAAAAGTTTGAAGATATTGGTAATGAAATTGTAAAGAGGTGCAAAGGCTTGCCTCTTGCTGCTAAGACTTTGGGTAGTCTAATGCGGTGTAAGAAGACAGTGCAACAATGGGTAGATGTTTTGAATAGTAAGATATGGGAATTAGAAGTGGTTGAAAATGAAGTTTTTCAACCCTTGTTTCTAAGTTACCATGATTTAGAACCCCAGTCCAAACGTTGTCTTTTGTATTGTGCTACATTTCCTAAAGATCTTGAGATTATCAAGGATCAGTTGATTGAATTGTGGATGTCACAAGGTTATCTTGAAGTCAAAGGTGGAAACAAAGAAAAGACAACAGTAGGTCAAAGGTGTTTTGAGAACTTAGTAACGCGGTCTTTCTTTCAAGATATTAAGGAAGATTCTGAAGGGAATATTAGAAGTTGTAAAATGCACGATATTGTGCAATACTTGACCAAGGATGAATGCTTTAGTATGGTGGTTAAGGGTGCTAATGAGAGAATGGAGTTACCGGGTGATGAGGTCAGTCATTTGTCTTTAATGTTTGCACCCGAGGGTCCATTTCCTGTTTCTTCTCTCAACTGTAAGAGTTTGCGCACTCTCACAGCTTTTGAATCGAAACTTACTAGCATTGGCGTTGAGTTGATTTCGCAATCAAAAAGCCTTAGGACTTTGAATTTGAGTAAAAACTCGATTTTAGAAGTTCCAAAGGAGATTGGTGGATTGATACATTTGAGATATCTGGACTTGTCTCAAAACCGTGAACTGAAGGAATTGCCCGACAGTTTATGTGATTTATACAATCTGCAAACCTTGCGGCTTGTCCAGTGCAGACAACTTGTCAAATTTCCCGATGAAGAGGCAATGAGAAAGCTAACCAAGTTAAAGCATCTTTATGTTGAGGGGTCCTGTCGTCTAAAATCAAAAGGGATAGGGAGGTTAACCGGTCTGCAAAAGCTAGATGTGTTTCATCTAAATGGTTATAGGGGTGAGGACAAAGAAGGGACGTTGAAGTTGCAAGATTTGGAAAACTTGAACCAACTTGAAGGGAGTCTTTCCATTGCACACTTGGAGTCTGTGGAAGATGCGAGTGAGGGTGTAAAGGCATGTTTGAGTGACAAACATCTCCTTCATCATCTGCATCTAGATTTCTTATGTTCCAATGGATGTGATAAGTGGGTAAGAGAAGAAGGGAGGGGCCAAAATGATAGAGAAATACTGAATGGGCTGCAACCACATGGAGGTTTGGAATCATTGACCATCTGGAACTGCCAGCTGGCTACTTCTCCGTGTCCCAACTGGATCTTGTCTTTACATAATCTGACAAGGCTTCGGCTTTGGTATTTCGGTAATTGTGAGCTGCTTTCGGGTCCATTTGGGAGATTGCCGTCGCTTGAATCACTTATAATTGGGTACATGTACAAAGTGAAAAAGGTGGGAGTGGAGTTTTTGGGAATTGAAGAAAGAGAATTACAATCATCCTCCTCCTCCTCGTCTTCTCTTATTTTATTCCCCAAATTGAAAAGCCTCGTGTTCTGGGATATGAACGAGTGGGAAGAGTGGGAAGGAGTGGGAGGGGATTTTCAGAATAATATTACCATAATGCCCTCCCTATCTCGCTTGGTATTTGACGGGTGCTTCAAACTTGGTACGCTGCCCGACTTCCTGCGCAAGACACCTGCCCTACAGACAGTGATCGTCGACGATTCTCCAAGGCTCGATATTCTTAGTGGTGCAATTGCAAAGCTCAATGCTCTTTCATCGTCCCCGTCAGGCAGGCGACAAATCAAGCTGCAGGCTGTGAGCTTTCTTTCTTCCCTACAAATAGTAGCTGTTATATGTACTCTACAAACACTGCCGGACTTCCTGGGCGTTATACTTGACATGAGGTCACTTGAGCTTCTACCTCCTTTAGGGACATTGCCATTCCTTGAAGCGTTGGAAATACAGGGATTGGGAGGGTCAAGCCTCCAAGTTGTAATGGCTGGATTCCCTAAGACCGAATGCCCCCATCCTCAGAGTGTGACCGTCTACAAGGCTCCAATTCTCAGGGGTATAGTCCGGGACAAAACAAGTGAGGAGTGGGCCAAGATTTCTCACGTCCCAGGCATCCGAGTCGTCGAATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0016740 GO:0016757
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_trans_4_5 Glycos_transf_1

Protein Analysis

1069

Amino Acids

120.97

Weight (kDa)

6.4

Isoelectric Point (pI)

45.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 94 4.6e-23 Rx N-terminal domain
NB-ARC PF00931 183 - 353 3.2e-33 NB-ARC domain
WHD_DRP PF23559 441 - 509 3.1e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 558 - 901 3.4e-26 Leucine-rich repeat region
LRR_8 PF13855 558 - 614 6.2e-07 Leucine rich repeat
LRR_8 PF13855 581 - 637 7.6e-08 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 699 - 833 4.1e-25 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 450, 2486
AarI CACCTGC 1 cut(s) 2767
Acc16I TGCGCA 3 cut(s) 960, 1676, 2750
Acc36I ACCTGC 2 cut(s) 952, 2767
AccB1I GGYRCC 1 cut(s) 920
AccB7I CCANNNNNTGG 1 cut(s) 61
AccI GTMKAC 2 cut(s) 2781, 3111
AccII CGCG 2 cut(s) 952, 1453
AciI CCGC 4 cut(s) 149, 1168, 1453, 1897
AclI AACGTT 1 cut(s) 1297
AclWI GGATC 2 cut(s) 1356, 2390
AcsI RAATTY 6 cut(s) 443, 473, 784, 936, 1756, 1925
AcuI CTGAAG 3 cut(s) 27, 1506, 1868
AfaI GTAC 7 cut(s) 221, 303, 732, 2495, 2501, 2731, 2923
AfiI CCNNNNNNNGG 3 cut(s) 61, 2321, 2993
AflII CTTAAG 1 cut(s) 767
AflIII ACRYGT 1 cut(s) 2496
AgeI ACCGGT 1 cut(s) 2024
AhdI GACNNNNNGTC 2 cut(s) 1919, 2968
AhlI ACTAGT 2 cut(s) 556, 986
AjiI CACGTC 1 cut(s) 3181
AjnI CCWGG 2 cut(s) 2946, 3184
Alw21I GWGCWC 1 cut(s) 254
Alw26I GTCTC 6 cut(s) 70, 181, 518, 531, 721, 1836
AlwI GGATC 2 cut(s) 1356, 2390
Ama87I CYCGRG 1 cut(s) 1631
AoxI GGCC 3 cut(s) 177, 2278, 3165
ApeKI GCWGC 5 cut(s) 1142, 2308, 2440, 2734, 2872
ApoI RAATTY 6 cut(s) 443, 473, 784, 936, 1756, 1925
ArsI GACNNNNNNTTYG 2 cut(s) 1741, 1773
AsiGI ACCGGT 1 cut(s) 2024
Asp700I GAANNNNTTC 2 cut(s) 132, 1248
AspLEI GCGC 3 cut(s) 961, 1677, 2751
AspS9I GGNCC 5 cut(s) 1637, 1986, 2278, 2450, 3165
AsuC2I CCSGG 2 cut(s) 1593, 3143
AsuHPI GGTGA 5 cut(s) 299, 1031, 1079, 1607, 2081
AvaI CYCGRG 1 cut(s) 1631
AvaII GGWCC 3 cut(s) 1637, 1986, 2450
AxyI CCTNAGG 2 cut(s) 925, 1745
BanI GGYRCC 1 cut(s) 920
BanII GRGCYC 1 cut(s) 897
BauI CACGAG 1 cut(s) 2609
BbsI GAAGAC 2 cut(s) 1184, 2568
Bbv12I GWGCWC 1 cut(s) 254
BbvI GCAGC 5 cut(s) 1129, 2295, 2427, 2721, 2859
BccI CCATC 4 cut(s) 53, 761, 2348, 3099
BceAI ACGGC 1 cut(s) 2452
BcgI CGANNNNNNTGC 1 cut(s) 3178
BciT130I CCWGG 2 cut(s) 2948, 3186
BciVI GTATCC 1 cut(s) 28
BcnI CCSGG 2 cut(s) 1593, 3143
BcoDI GTCTC 6 cut(s) 70, 181, 518, 531, 721, 1836
BcuI ACTAGT 2 cut(s) 556, 986
BfaI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1707, 2039, 2225
BfmI CTRYAG 2 cut(s) 2765, 2873
BfrI CTTAAG 1 cut(s) 767
BfuAI ACCTGC 2 cut(s) 952, 2767
BfuI GTATCC 1 cut(s) 28
BglII AGATCT 1 cut(s) 1330
BisI GCNGC 6 cut(s) 1143, 1898, 2309, 2441, 2735, 2873
BlsI GCNGC 6 cut(s) 1144, 1899, 2310, 2442, 2736, 2874
Bme1390I CCNGG 4 cut(s) 1593, 2948, 3143, 3186
Bme18I GGWCC 3 cut(s) 1637, 1986, 2450
BmeRI GACNNNNNGTC 2 cut(s) 1919, 2968
BmeT110I CYCGRG 1 cut(s) 1631
BmgBI CACGTC 1 cut(s) 3181
BmgT120I GGNCC 5 cut(s) 1637, 1986, 2278, 2450, 3165
BmiI GGNNCC 8 cut(s) 43, 894, 922, 1638, 1987, 2279, 2451, 3120
BmrFI CCNGG 4 cut(s) 1593, 2948, 3143, 3186
BmrI ACTGGG 1 cut(s) 1282
BmsI GCATC 5 cut(s) 142, 1978, 2155, 2230, 3198
BmuI ACTGGG 1 cut(s) 1282
BpiI GAAGAC 2 cut(s) 1184, 2568
BpuEI CTTGAG 2 cut(s) 1355, 2996
BpuMI CCSGG 2 cut(s) 1593, 3143
BsaJI CCNNGG 5 cut(s) 1536, 1632, 2792, 2947, 3184
BsaWI WCCGGW 1 cut(s) 2024
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 2321, 2993
Bse118I RCCGGY 1 cut(s) 2024
Bse1I ACTGG 4 cut(s) 565, 1288, 1906, 2384
Bse21I CCTNAGG 2 cut(s) 925, 1745
Bse3DI GCAATG 6 cut(s) 384, 981, 1050, 1950, 2139, 2999
BseBI CCWGG 2 cut(s) 2948, 3186
BseDI CCNNGG 5 cut(s) 1536, 1632, 2792, 2947, 3184
BseGI GGATG 8 cut(s) 157, 753, 1374, 1546, 2252, 2558, 3091, 3189
BseLI CCNNNNNNNGG 3 cut(s) 61, 2321, 2993
BseMI GCAATG 6 cut(s) 384, 981, 1050, 1950, 2139, 2999
BseMII CTCAG 6 cut(s) 377, 513, 732, 939, 3110, 3142
BseNI ACTGG 4 cut(s) 565, 1288, 1906, 2384
BseRI GAGGAG 5 cut(s) 175, 2554, 2557, 2560, 3173
BseXI GCAGC 5 cut(s) 1129, 2295, 2427, 2721, 2859
BsgI GTGCAG 1 cut(s) 1930
Bsh1236I CGCG 2 cut(s) 952, 1453
BshFI GGCC 3 cut(s) 179, 2280, 3167
BshNI GGYRCC 1 cut(s) 920
BshTI ACCGGT 1 cut(s) 2024
BsiHKAI GWGCWC 1 cut(s) 254
BsiHKCI CYCGRG 1 cut(s) 1631
BsiSI CCGG 4 cut(s) 1592, 2025, 2939, 3142
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 8 cut(s) 764, 884, 2098, 2358, 2830, 3010, 3158, 3167
BslI CCNNNNNNNGG 3 cut(s) 61, 2321, 2993
BsmAI GTCTC 6 cut(s) 70, 181, 518, 531, 721, 1836
BsmBI CGTCTC 1 cut(s) 181
BsmFI GGGAC 8 cut(s) 764, 884, 2098, 2358, 2830, 3010, 3158, 3167
BsmI GAATGC 2 cut(s) 1550, 3089
BsnI GGCC 3 cut(s) 179, 2280, 3167
BsoBI CYCGRG 1 cut(s) 1631
Bsp1286I GDGCHC 2 cut(s) 254, 897
Bsp1407I TGTACA 2 cut(s) 730, 2499
Bsp143I GATC 4 cut(s) 1330, 1348, 2382, 2775
BspACI CCGC 4 cut(s) 149, 1168, 1453, 1897
BspANI GGCC 3 cut(s) 179, 2280, 3167
BspCNI CTCAG 6 cut(s) 376, 514, 731, 938, 3109, 3141
BspFNI CGCG 2 cut(s) 952, 1453
BspHI TCATGA 1 cut(s) 430
BspLI GGNNCC 8 cut(s) 43, 894, 922, 1638, 1987, 2279, 2451, 3120
BspMAI CTGCAG 1 cut(s) 2877
BspMI ACCTGC 2 cut(s) 952, 2767
BspPI GGATC 2 cut(s) 1356, 2390
BspT107I GGYRCC 1 cut(s) 920
BspTI CTTAAG 1 cut(s) 767
BsrDI GCAATG 6 cut(s) 384, 981, 1050, 1950, 2139, 2999
BsrFI RCCGGY 1 cut(s) 2024
BsrGI TGTACA 2 cut(s) 730, 2499
BsrI ACTGG 4 cut(s) 565, 1288, 1906, 2384
BssAI RCCGGY 1 cut(s) 2024
BssECI CCNNGG 5 cut(s) 1536, 1632, 2792, 2947, 3184
BssMI GATC 4 cut(s) 1330, 1348, 2382, 2775
BssSI CACGAG 1 cut(s) 2609
BssT1I CCWWGG 2 cut(s) 1536, 2792
Bst2BI CACGAG 1 cut(s) 2609
Bst2UI CCWGG 2 cut(s) 2948, 3186
Bst4CI ACNGT 7 cut(s) 1183, 1420, 1664, 1841, 1865, 2773, 3109
Bst6I CTCTTC 2 cut(s) 1932, 2631
BstAFI CTTAAG 1 cut(s) 767
BstAPI GCANNNNNTGC 1 cut(s) 1894
BstAUI TGTACA 2 cut(s) 730, 2499
BstC8I GCNNGC 7 cut(s) 147, 194, 1133, 2354, 2358, 2858, 2877
BstENI CCTNNNNNAGG 1 cut(s) 2991
BstF5I GGATG 8 cut(s) 157, 753, 1374, 1546, 2252, 2558, 3091, 3189
BstFNI CGCG 2 cut(s) 952, 1453
BstHHI GCGC 3 cut(s) 961, 1677, 2751
BstKTI GATC 4 cut(s) 1333, 1351, 2385, 2778
BstMAI GTCTC 6 cut(s) 70, 181, 518, 531, 721, 1836
BstMBI GATC 4 cut(s) 1330, 1348, 2382, 2775
BstMWI GCNNNNNNNGC 5 cut(s) 146, 659, 958, 965, 1894
BstNI CCWGG 2 cut(s) 2948, 3186
BstNSI RCATGY 2 cut(s) 2190, 2500
BstSCI CCNGG 4 cut(s) 1591, 2946, 3141, 3184
BstSFI CTRYAG 2 cut(s) 2765, 2873
BstUI CGCG 2 cut(s) 952, 1453
BstV1I GCAGC 5 cut(s) 1129, 2295, 2427, 2721, 2859
BstV2I GAAGAC 2 cut(s) 1184, 2568
BstX2I RGATCY 2 cut(s) 1330, 2382
BstYI RGATCY 2 cut(s) 1330, 2382
Bsu36I CCTNAGG 2 cut(s) 925, 1745
BsuI GTATCC 1 cut(s) 28
BsuRI GGCC 3 cut(s) 179, 2280, 3167
BtrI CACGTC 1 cut(s) 3181
BtsCI GGATG 8 cut(s) 157, 753, 1374, 1546, 2252, 2558, 3091, 3189
BtsI GCAGTG 1 cut(s) 2933
BtsIMutI CAGTG 5 cut(s) 252, 1188, 1913, 2778, 2933
BveI ACCTGC 2 cut(s) 952, 2767
Cac8I GCNNGC 7 cut(s) 147, 194, 1133, 2354, 2358, 2858, 2877
CciI TCATGA 1 cut(s) 430
CfoI GCGC 3 cut(s) 961, 1677, 2751
Cfr10I RCCGGY 1 cut(s) 2024
Cfr13I GGNCC 5 cut(s) 1637, 1986, 2278, 2450, 3165
CseI GACGC 1 cut(s) 198
Csp6I GTAC 7 cut(s) 220, 302, 731, 2494, 2500, 2730, 2922
CspAI ACCGGT 1 cut(s) 2024
CviAII CATG 6 cut(s) 431, 1274, 2187, 2318, 2497, 2965
CviQI GTAC 7 cut(s) 220, 302, 731, 2494, 2500, 2730, 2922
DpnI GATC 4 cut(s) 1332, 1350, 2384, 2777
DpnII GATC 4 cut(s) 1330, 1348, 2382, 2775
DriI GACNNNNNGTC 2 cut(s) 1919, 2968
Eam1104I CTCTTC 2 cut(s) 1932, 2631
Eam1105I GACNNNNNGTC 2 cut(s) 1919, 2968
EarI CTCTTC 2 cut(s) 1932, 2631
EciI GGCGGA 1 cut(s) 164
Eco130I CCWWGG 2 cut(s) 1536, 2792
Eco24I GRGCYC 1 cut(s) 897
Eco32I GATATC 1 cut(s) 1820
Eco47I GGWCC 3 cut(s) 1637, 1986, 2450
Eco57I CTGAAG 3 cut(s) 27, 1506, 1868
Eco81I CCTNAGG 2 cut(s) 925, 1745
Eco88I CYCGRG 1 cut(s) 1631
EcoNI CCTNNNNNAGG 1 cut(s) 2991
EcoO109I RGGNCCY 1 cut(s) 1986
EcoRII CCWGG 2 cut(s) 2946, 3184
EcoRV GATATC 1 cut(s) 1820
EcoT14I CCWWGG 2 cut(s) 1536, 2792
EcoT38I GRGCYC 1 cut(s) 897
ErhI CCWWGG 2 cut(s) 1536, 2792
Esp3I CGTCTC 1 cut(s) 181
FaeI CATG 6 cut(s) 434, 1277, 2190, 2321, 2500, 2968
FalI AAGNNNNNCTT 6 cut(s) 741, 773, 1368, 1400, 2118, 2150
FaqI GGGAC 8 cut(s) 764, 884, 2098, 2358, 2830, 3010, 3158, 3167
FatI CATG 6 cut(s) 430, 1273, 2186, 2317, 2496, 2964
FblI GTMKAC 2 cut(s) 2781, 3111
Fnu4HI GCNGC 6 cut(s) 1143, 1898, 2309, 2441, 2735, 2873
FokI GGATG 8 cut(s) 164, 740, 1381, 1553, 2259, 2545, 3078, 3176
FriOI GRGCYC 1 cut(s) 897
Fsp4HI GCNGC 6 cut(s) 1143, 1898, 2309, 2441, 2735, 2873
FspBI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1707, 2039, 2225
FspI TGCGCA 3 cut(s) 960, 1676, 2750
GlaI GCGC 3 cut(s) 960, 1676, 2750
GluI GCNGC 6 cut(s) 1143, 1898, 2309, 2441, 2735, 2873
HaeIII GGCC 3 cut(s) 179, 2280, 3167
HapII CCGG 4 cut(s) 1592, 2025, 2939, 3142
HgaI GACGC 1 cut(s) 198
HhaI GCGC 3 cut(s) 961, 1677, 2751
Hin1II CATG 6 cut(s) 434, 1277, 2190, 2321, 2500, 2968
Hin6I GCGC 3 cut(s) 959, 1675, 2749
HinP1I GCGC 3 cut(s) 959, 1675, 2749
HincII GTYRAC 2 cut(s) 2022, 2782
HindII GTYRAC 2 cut(s) 2022, 2782
HpaI GTTAAC 1 cut(s) 2022
HpaII CCGG 4 cut(s) 1592, 2025, 2939, 3142
HphI GGTGA 5 cut(s) 299, 1031, 1079, 1607, 2081
Hpy166II GTNNAC 5 cut(s) 241, 1844, 2022, 2782, 3112
Hpy8I GTNNAC 5 cut(s) 241, 1844, 2022, 2782, 3112
Hpy99I CGWCG 5 cut(s) 381, 2473, 2783, 2786, 3203
HpyCH4III ACNGT 7 cut(s) 1183, 1420, 1664, 1841, 1865, 2773, 3109
HpyCH4IV ACGT 5 cut(s) 72, 183, 1297, 2087, 3180
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 659, 958, 965, 1894
HpySE526I ACGT 5 cut(s) 72, 183, 1297, 2087, 3180
Hsp92II CATG 6 cut(s) 434, 1277, 2190, 2321, 2500, 2968
HspAI GCGC 3 cut(s) 959, 1675, 2749
KspAI GTTAAC 1 cut(s) 2022
Kzo9I GATC 4 cut(s) 1330, 1348, 2382, 2775
LmnI GCTCC 3 cut(s) 249, 892, 3124
Lsp1109I GCAGC 5 cut(s) 1129, 2295, 2427, 2721, 2859
LweI GCATC 5 cut(s) 142, 1978, 2155, 2230, 3198
MaeI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1707, 2039, 2225
MaeII ACGT 5 cut(s) 72, 183, 1297, 2087, 3180
MalI GATC 4 cut(s) 1332, 1350, 2384, 2777
MboI GATC 4 cut(s) 1330, 1348, 2382, 2775
MfeI CAATTG 2 cut(s) 507, 2817
MflI RGATCY 2 cut(s) 1330, 2382
MhlI GDGCHC 2 cut(s) 254, 897
MlyI GAGTC 6 cut(s) 818, 866, 1088, 2140, 2162, 3204
MmeI TCCRAC 2 cut(s) 79, 3000
MroXI GAANNNNTTC 2 cut(s) 132, 1248
MseI TTAA 7 cut(s) 768, 831, 1473, 1563, 1619, 1964, 2021
MslI CAYNNNNRTG 4 cut(s) 389, 918, 1974, 2055
MspA1I CMGCKG 1 cut(s) 2356
MspCI CTTAAG 1 cut(s) 767
MspI CCGG 4 cut(s) 1592, 2025, 2939, 3142
MspR9I CCNGG 4 cut(s) 1593, 2948, 3143, 3186
MunI CAATTG 2 cut(s) 507, 2817
Mva1269I GAATGC 2 cut(s) 1550, 3089
MvaI CCWGG 2 cut(s) 2948, 3186
MvnI CGCG 2 cut(s) 952, 1453
MwoI GCNNNNNNNGC 5 cut(s) 146, 659, 958, 965, 1894
NciI CCSGG 2 cut(s) 1593, 3143
NdeII GATC 4 cut(s) 1330, 1348, 2382, 2775
NlaIII CATG 6 cut(s) 434, 1277, 2190, 2321, 2500, 2968
NlaIV GGNNCC 8 cut(s) 43, 894, 922, 1638, 1987, 2279, 2451, 3120
NmuCI GTSAC 7 cut(s) 358, 380, 989, 1371, 2195, 2970, 3103
NsbI TGCGCA 3 cut(s) 960, 1676, 2750
NspI RCATGY 2 cut(s) 2190, 2500
PagI TCATGA 1 cut(s) 430
PaqCI CACCTGC 1 cut(s) 2767
PciI ACATGT 1 cut(s) 2496
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 2 cut(s) 1550, 3089
PdmI GAANNNNTTC 2 cut(s) 132, 1248
PfeI GAWTC 8 cut(s) 427, 518, 1481, 1694, 2330, 2477, 2786, 3069
Pfl23II CGTACG 1 cut(s) 219
PflMI CCANNNNNTGG 1 cut(s) 61
PfoI TCCNGGA 1 cut(s) 3141
PinAI ACCGGT 1 cut(s) 2024
PkrI GCNGC 6 cut(s) 1144, 1899, 2310, 2442, 2736, 2874
PleI GAGTC 6 cut(s) 818, 866, 1087, 2139, 2161, 3203
PpsI GAGTC 6 cut(s) 818, 866, 1087, 2139, 2161, 3203
PpuMI RGGWCCY 1 cut(s) 1986
PscI ACATGT 1 cut(s) 2496
PsiI TTATAA 2 cut(s) 450, 2486
Psp1406I AACGTT 1 cut(s) 1297
Psp5II RGGWCCY 1 cut(s) 1986
Psp6I CCWGG 2 cut(s) 2946, 3184
PspGI CCWGG 2 cut(s) 2946, 3184
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 8 cut(s) 43, 894, 922, 1638, 1987, 2279, 2451, 3120
PspPI GGNCC 5 cut(s) 1637, 1986, 2278, 2450, 3165
PspPPI RGGWCCY 1 cut(s) 1986
PstI CTGCAG 1 cut(s) 2877
PsuI RGATCY 2 cut(s) 1330, 2382
PvuII CAGCTG 1 cut(s) 2356
RsaI GTAC 7 cut(s) 221, 303, 732, 2495, 2501, 2731, 2923
RsaNI GTAC 7 cut(s) 220, 302, 731, 2494, 2500, 2730, 2922
RseI CAYNNNNRTG 4 cut(s) 389, 918, 1974, 2055
SalI GTCGAC 1 cut(s) 2780
SaqAI TTAA 7 cut(s) 768, 831, 1473, 1563, 1619, 1964, 2021
SatI GCNGC 6 cut(s) 1143, 1898, 2309, 2441, 2735, 2873
Sau3AI GATC 4 cut(s) 1330, 1348, 2382, 2775
Sau96I GGNCC 5 cut(s) 1637, 1986, 2278, 2450, 3165
SchI GAGTC 6 cut(s) 818, 866, 1088, 2140, 2162, 3204
ScrFI CCNGG 4 cut(s) 1593, 2948, 3143, 3186
SduI GDGCHC 2 cut(s) 254, 897
SfaNI GCATC 5 cut(s) 142, 1978, 2155, 2230, 3198
SfcI CTRYAG 2 cut(s) 2765, 2873
SgrDI CGTCGACG 1 cut(s) 2780
SinI GGWCC 3 cut(s) 1637, 1986, 2450
SmiMI CAYNNNNRTG 4 cut(s) 389, 918, 1974, 2055
SmlI CTYRAG 3 cut(s) 767, 1334, 2975
SmoI CTYRAG 3 cut(s) 767, 1334, 2975
SpeI ACTAGT 2 cut(s) 556, 986
SsiI CCGC 4 cut(s) 149, 1168, 1453, 1897
SspI AATATT 2 cut(s) 1495, 2674
SspMI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1707, 2039, 2225
StyD4I CCNGG 4 cut(s) 1591, 2946, 3141, 3184
StyI CCWWGG 2 cut(s) 1536, 2792
TaaI ACNGT 7 cut(s) 1183, 1420, 1664, 1841, 1865, 2773, 3109
TaiI ACGT 5 cut(s) 75, 186, 1300, 2090, 3183
TaqI TCGA 8 cut(s) 126, 276, 459, 1697, 1772, 2781, 2799, 3201
TaqII GACCGA 2 cut(s) 1023, 3095
TatI WGTACW 3 cut(s) 730, 2499, 2921
TauI GCSGC 1 cut(s) 1900
TfiI GAWTC 8 cut(s) 427, 518, 1481, 1694, 2330, 2477, 2786, 3069
Tru1I TTAA 7 cut(s) 768, 831, 1473, 1563, 1619, 1964, 2021
Tru9I TTAA 7 cut(s) 768, 831, 1473, 1563, 1619, 1964, 2021
TscAI CASTG 5 cut(s) 259, 1188, 1913, 2778, 2940
TseFI GTSAC 7 cut(s) 358, 380, 989, 1371, 2195, 2970, 3103
TseI GCWGC 5 cut(s) 1142, 2308, 2440, 2734, 2872
Tsp45I GTSAC 7 cut(s) 358, 380, 989, 1371, 2195, 2970, 3103
TspGWI ACGGA 1 cut(s) 2358
TspRI CASTG 5 cut(s) 259, 1188, 1913, 2778, 2940
Van91I CCANNNNNTGG 1 cut(s) 61
Vha464I CTTAAG 1 cut(s) 767
VpaK11BI GGWCC 3 cut(s) 1637, 1986, 2450
XagI CCTNNNNNAGG 1 cut(s) 2991
XapI RAATTY 6 cut(s) 443, 473, 784, 936, 1756, 1925
XbaI TCTAGA 1 cut(s) 2224
XceI RCATGY 2 cut(s) 2190, 2500
XcmI CCANNNNNNNNNTGG 1 cut(s) 2146
XmiI GTMKAC 2 cut(s) 2781, 3111
XmnI GAANNNNTTC 2 cut(s) 132, 1248
XspI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1707, 2039, 2225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.