Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0006323

Physical Location & Seq

Genomic Coordinates Reverse (-)

51619024 .. 51626118

Gene Structure 7095 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG378000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGAGGAAGGCAGTAAAGGAGACTATAAGTCATCGAGGGGAGTTGGAAGTTTTAAGTCTGCATTGTCAGGGCGATCAAGTCCGCGAAACTCTCCCTCATTTCGGAGATTGCACTCAAGCCGTACTCCCCGAAGAGAAGCTAGAACTAGTGGAGGTGTACAGTGGTTTCGGAGCAATCGGTTACTGTTTTGGTTGTTATTGATTACTCTTTGGGCGTATCTTGGATTTTATTTTCAGTCAAGTTGGGCGCATAGCAATAACAAGGAGAACTTTCTGGGGGTTGGAAATGAAGCAAGCAATGAGAAGCCAGATGATTTGCTTGTCAATGACAGTCCCGTGGCACTGAAGAATGAGACTGGTCAAAGTCAACCGAAAGCTGGTAAAAGCATAGACGTGGTTTTGGCAAAAAAAGATAATGGAGTTGCATCTCGTAGGAGCCTGAGTTCAAAGAAGAAGAGTAAGAAAGCAGCTCGTGGTAAAGCTCGTGGAAAGCCGAAGAAAACTGTGGAGGTTGAAGTCCATGAGATGGAGGAGCAGGAACCGGACATTCCTAAGACCAATACATCTTATGGGATGCTTGTTGGTCCATTTGGTTCTGCGGAGGATAGAATTCTGGAATGGAGTCCTAAAATACGATCTGGAACCTGTGACAGGAAGGGGGACTTTGCACGTCTTGTATGGTCAAGGAGATTTCTGTTAATATTCCATGAACTTTCAATGACTGGGGCACCCCTTTCAATGATGGAGCTGGCAACAGAGCTTTTGAGCTGTGGAGCCACAGTTTCTGCAGTAGTTCTTAGCAAGAAGGGTGGCTTGATGCCAGAGCTTACTAGGAGAAAAATCAAGGTGCTTGAAGACAAAGTAGATCATAGCTTCAAAACTGCCATGAAACAAGATCTCGTTATTGCCGGGTCAGCAGTCTGTGCATCATGGATCGATCAATACATTGATAAGTTCCCAGCTGGTGCAAGTCAAATTGCTTGGTGGATCATGGAAAACCGGAGAGAATACTTTGATAGGGCAAAGGTTGTGCTGGACCGAGTGAAAATGCTGGCTTTTCTATCAGAATCACAGTCAAAACAATGGCTAGAGTGGTGTGAAGAAGAAAAGATTAAGCTGAGGTCTCAGCCGGCAGTTGTGCCACTCTCTATTAATGATGAACTAGCATTTGTAGCTGGTATAGGTTGTTCGCTTAATACTCCATCTTCCAGTACTGAGAAGATGCTAGAGAAAAGGCAGTTATTGCGAGATGCAGTTAGGAAGGAGATGGGGTTAACAGATAATGATATGCTTGTGATATCTCTAAGCAGTATAAACCCTGGAAAGGGCCAGCTCTTGTTTCTTAACTCAGCACGCTTGGTGATAGAAGAAGAACCTCAGCCAGATAATTCTAAGATAAAAAATTCAGTACGTAAGGGTCGAGTCCGTTCTGCCTTGGCTAAAAAGCATCACTTAAGAGCTTTGCTTCAAGGAATGAATGATCATGGTATATTATCAAATGGATTTCCACTGTCCACACTGTCCACTGAATCTAGTGTCCACTTGAAAGAAGACCAGAAGAAACATTTGCTGTTACATAATCGCTTTGCCTCTGTTGATGATACAGATGCCTTGAACTTCGATGTCACTCACAAAAGGAAAGTGTTGGCAGATAATGGAGGAACAGTGAAACAATCTGCCAAATTTCTTATTGGTTCTGTTGGATCTAAGAGCAATAAGGTGGTTTATGTCAAAGAACTTTTAAGTTTTCTCTCTCAGCATTCAAACTTGTCAAAGTCGGTGCTGTGGACTCCCGCAACCACGCGTGTAGCCGCACTATACTCTGCAGCTGATGTTTATGTCATGAACTCTCAGGGTCTGGGAGAAACTTTTGGGAGAGTGACAATTGAAGCCATGGCATTTGGTCTTCCGGTGCTTGGAACAGATGCTGGGGGCACAAAAGAGATTGTCGACCACAATGTGACAGGTCTGCTTCATCCTCTGGGGCATCCCGGTACTCCAGTCCTAGCTAAAAATCTCCGGTTTTTGCTGAAAAACCCAGAATTAAGGAAGCAAATGGGATTGAAAGGAAGAGAAAAGTTAGAGAGGATGTACCTAAAGCGGCACATGTACAAGAAATTTGTTGGCGTTCTTCTCAAGTGCATGAGACCCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0016740 GO:0016757

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_trans_4_5 Glycos_transf_1

Protein Analysis

718

Amino Acids

79.96

Weight (kDa)

9.82

Isoelectric Point (pI)

42.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_trans_4_5	PF16994	227 - 396	6.7e-77	Glycosyl-transferase family 4
Glyco_trans_1_4	PF13692	573 - 678	6e-17	Glycosyl transferases group 1
Glycos_transf_1	PF00534	580 - 692	5.9e-21	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52420 AT3G15940 AT3G15940
fragaria_vesca	FvH4_6g30940 FvH4_6g30940 FvH4_6g30940 FvH4_6g30940
malus_domestica	MD00G1200900.v1.1 MD17G1197500.v1.1
prunus_persica	Prupe.3G073400_v2.0.a1 Prupe.3G073400_v2.0.a1 Prupe.3G073400_v2.0.a1 Prupe.3G073400_v2.0.a1
pyrus_communis	pycom09g13180 pycom17g20240
rosa_chinensis	RchiOBHm_Chr2g0137571
rosa_laevigata	RLG00000019662
rosa_multiflora	Rmu_sc0042567.1_g000001
rosa_roxburghii	Rroxscaffold_2G00107010
rosa_rugosa	Rorug02G0343200 Rorug02G0343300 Rorug02G0343400
rosa_samantha	Rh2AG391000 Rh2BG398500 Rh2CG378000 Rh2DG413600
rosa_wichuraiana	Rw2G032030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	727
AccB7I	CCANNNNNTGG	1 cut(s)	526
AccI	GTMKAC	1 cut(s)	1950
AccII	CGCG	2 cut(s)	85, 1804
AciI	CCGC	5 cut(s)	83, 599, 1794, 1812, 2101
AclWI	GGATC	3 cut(s)	941, 995, 1711
AcsI	RAATTY	4 cut(s)	609, 1402, 1682, 2117
AcuI	CTGAAG	1 cut(s)	365
AdeI	CACNNNGTG	1 cut(s)	1960
AfaI	GTAC	7 cut(s)	124, 159, 1213, 1410, 1996, 2093, 2111
AfiI	CCNNNNNNNGG	7 cut(s)	102, 377, 526, 651, 1324, 1325, 1916
AflII	CTTAAG	1 cut(s)	1453
AflIII	ACRYGT	2 cut(s)	1802, 2106
AhdI	GACNNNNNGTC	1 cut(s)	28
AhlI	ACTAGT	1 cut(s)	146
AjiI	CACGTC	2 cut(s)	394, 671
AjnI	CCWGG	1 cut(s)	1318
AloI	GAACNNNNNNTCC	2 cut(s)	427, 459
Alw26I	GTCTC	4 cut(s)	15, 347, 1128, 2140
AlwI	GGATC	3 cut(s)	941, 995, 1711
AlwNI	CAGNNNCTG	3 cut(s)	785, 1858, 1928
AoxI	GGCC	1 cut(s)	1327
ApeKI	GCWGC	2 cut(s)	467, 1826
ApoI	RAATTY	4 cut(s)	609, 1402, 1682, 2117
AseI	ATTAAT	1 cut(s)	1152
AspLEI	GCGC	1 cut(s)	250
AspS9I	GGNCC	3 cut(s)	584, 1036, 1327
AsuC2I	CCSGG	2 cut(s)	910, 1992
AsuHPI	GGTGA	1 cut(s)	1372
AvaII	GGWCC	2 cut(s)	584, 1036
BaeGI	GKGCMC	2 cut(s)	730, 1937
BaeI	ACNNNNGTAYC	2 cut(s)	1986, 2019
BanI	GGYRCC	1 cut(s)	727
BauI	CACGAG	2 cut(s)	471, 483
BbsI	GAAGAC	3 cut(s)	861, 1557, 1898
BbvCI	CCTCAGC	2 cut(s)	1118, 1377
BbvI	GCAGC	2 cut(s)	479, 1838
BccI	CCATC	4 cut(s)	520, 736, 1210, 1261
BceAI	ACGGC	1 cut(s)	105
BciT130I	CCWGG	1 cut(s)	1320
BclI	TGATCA	1 cut(s)	1480
BcnI	CCSGG	2 cut(s)	910, 1992
BcoDI	GTCTC	4 cut(s)	15, 347, 1128, 2140
BcuI	ACTAGT	1 cut(s)	146
BfaI	CTAG	8 cut(s)	141, 147, 831, 1088, 1163, 1226, 1533, 2006
BfmI	CTRYAG	2 cut(s)	786, 1824
BfrI	CTTAAG	1 cut(s)	1453
BglII	AGATCT	1 cut(s)	895
BisI	GCNGC	4 cut(s)	468, 1812, 1827, 2102
BlsI	GCNGC	4 cut(s)	469, 1813, 1828, 2103
BmcAI	AGTACT	1 cut(s)	1213
Bme1390I	CCNGG	3 cut(s)	910, 1320, 1992
Bme18I	GGWCC	2 cut(s)	584, 1036
BmeRI	GACNNNNNGTC	1 cut(s)	28
BmgBI	CACGTC	2 cut(s)	394, 671
BmgT120I	GGNCC	3 cut(s)	584, 1036, 1327
BmiI	GGNNCC	5 cut(s)	437, 540, 643, 729, 775
BmrFI	CCNGG	3 cut(s)	910, 1320, 1992
BmrI	ACTGGG	1 cut(s)	732
BmuI	ACTGGG	1 cut(s)	732
BpiI	GAAGAC	3 cut(s)	861, 1557, 1898
BpmI	CTGGAG	1 cut(s)	1983
Bpu10I	CCTNAGC	2 cut(s)	1118, 1377
BpuEI	CTTGAG	2 cut(s)	100, 2120
BpuMI	CCSGG	2 cut(s)	910, 1992
Bsa29I	ATCGAT	1 cut(s)	936
BsaAI	YACGTR	1 cut(s)	1412
BsaI	GGTCTC	2 cut(s)	1128, 2140
BsaJI	CCNNGG	4 cut(s)	336, 1318, 1434, 1893
BsaWI	WCCGGW	4 cut(s)	541, 999, 1909, 2019
BsaXI	ACNNNNNCTCC	8 cut(s)	427, 457, 765, 795, 1256, 1286, 1650, 1680
Bsc4I	CCNNNNNNNGG	7 cut(s)	102, 377, 526, 651, 1324, 1325, 1916
Bse118I	RCCGGY	1 cut(s)	1129
Bse1I	ACTGG	4 cut(s)	361, 727, 1209, 2000
Bse3DI	GCAATG	1 cut(s)	304
BseBI	CCWGG	1 cut(s)	1320
BseCI	ATCGAT	1 cut(s)	936
BseDI	CCNNGG	4 cut(s)	336, 1318, 1434, 1893
BseGI	GGATG	4 cut(s)	579, 1975, 1987, 2094
BseLI	CCNNNNNNNGG	7 cut(s)	102, 377, 526, 651, 1324, 1325, 1916
BseMI	GCAATG	1 cut(s)	304
BseMII	CTCAG	8 cut(s)	431, 1109, 1139, 1206, 1362, 1391, 1769, 1865
BseNI	ACTGG	4 cut(s)	361, 727, 1209, 2000
BseRI	GAGGAG	1 cut(s)	545
BseSI	GKGCMC	2 cut(s)	730, 1937
BseXI	GCAGC	2 cut(s)	479, 1838
BseYI	CCCAGC	2 cut(s)	958, 1928
Bsh1236I	CGCG	2 cut(s)	85, 1804
BshFI	GGCC	1 cut(s)	1329
BshNI	GGYRCC	1 cut(s)	727
BshVI	ATCGAT	1 cut(s)	936
BsiSI	CCGG	7 cut(s)	542, 909, 1000, 1130, 1910, 1992, 2020
BslFI	GGGAC	2 cut(s)	318, 674
BslI	CCNNNNNNNGG	7 cut(s)	102, 377, 526, 651, 1324, 1325, 1916
BsmAI	GTCTC	4 cut(s)	15, 347, 1128, 2140
BsmFI	GGGAC	2 cut(s)	318, 674
BsmI	GAATGC	1 cut(s)	1759
BsnI	GGCC	1 cut(s)	1329
Bso31I	GGTCTC	2 cut(s)	1128, 2140
Bsp1286I	GDGCHC	2 cut(s)	730, 1937
Bsp1407I	TGTACA	2 cut(s)	157, 2109
Bsp143I	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
Bsp19I	CCATGG	1 cut(s)	1893
BspACI	CCGC	5 cut(s)	83, 599, 1794, 1812, 2101
BspANI	GGCC	1 cut(s)	1329
BspCNI	CTCAG	8 cut(s)	432, 1110, 1138, 1207, 1361, 1390, 1768, 1864
BspDI	ATCGAT	1 cut(s)	936
BspFNI	CGCG	2 cut(s)	85, 1804
BspHI	TCATGA	1 cut(s)	1842
BspLI	GGNNCC	5 cut(s)	437, 540, 643, 729, 775
BspMAI	CTGCAG	2 cut(s)	790, 1828
BspPI	GGATC	3 cut(s)	941, 995, 1711
BspT107I	GGYRCC	1 cut(s)	727
BspTI	CTTAAG	1 cut(s)	1453
BspTNI	GGTCTC	2 cut(s)	1128, 2140
BsrDI	GCAATG	1 cut(s)	304
BsrFI	RCCGGY	1 cut(s)	1129
BsrGI	TGTACA	2 cut(s)	157, 2109
BsrI	ACTGG	4 cut(s)	361, 727, 1209, 2000
BssAI	RCCGGY	1 cut(s)	1129
BssECI	CCNNGG	4 cut(s)	336, 1318, 1434, 1893
BssMI	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
BssSI	CACGAG	2 cut(s)	471, 483
BssT1I	CCWWGG	2 cut(s)	1434, 1893
Bst2BI	CACGAG	2 cut(s)	471, 483
Bst2UI	CCWGG	1 cut(s)	1320
Bst4CI	ACNGT	9 cut(s)	162, 186, 332, 505, 781, 1074, 1512, 1521, 1666
Bst6I	CTCTTC	3 cut(s)	127, 449, 2065
BstAFI	CTTAAG	1 cut(s)	1453
BstAPI	GCANNNNNTGC	2 cut(s)	923, 1243
BstAUI	TGTACA	2 cut(s)	157, 2109
BstBAI	YACGTR	1 cut(s)	1412
BstC8I	GCNNGC	6 cut(s)	295, 750, 1053, 1131, 1331, 1354
BstDSI	CCRYGG	2 cut(s)	336, 1893
BstENI	CCTNNNNNAGG	1 cut(s)	649
BstF5I	GGATG	4 cut(s)	579, 1975, 1987, 2094
BstFNI	CGCG	2 cut(s)	85, 1804
BstHHI	GCGC	1 cut(s)	250
BstKTI	GATC	9 cut(s)	77, 638, 868, 898, 936, 940, 990, 1483, 1706
BstMAI	GTCTC	4 cut(s)	15, 347, 1128, 2140
BstMBI	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
BstMWI	GCNNNNNNNGC	4 cut(s)	914, 923, 1172, 1243
BstNI	CCWGG	1 cut(s)	1320
BstNSI	RCATGY	1 cut(s)	2110
BstSCI	CCNGG	3 cut(s)	908, 1318, 1990
BstSFI	CTRYAG	2 cut(s)	786, 1824
BstSLI	GKGCMC	2 cut(s)	730, 1937
BstSNI	TACGTA	1 cut(s)	1412
BstUI	CGCG	2 cut(s)	85, 1804
BstV1I	GCAGC	2 cut(s)	479, 1838
BstV2I	GAAGAC	3 cut(s)	861, 1557, 1898
BstX2I	RGATCY	2 cut(s)	895, 1703
BstYI	RGATCY	2 cut(s)	895, 1703
Bsu15I	ATCGAT	1 cut(s)	936
BsuRI	GGCC	1 cut(s)	1329
BsuTUI	ATCGAT	1 cut(s)	936
BtgI	CCRYGG	2 cut(s)	336, 1893
BtrI	CACGTC	2 cut(s)	394, 671
BtsCI	GGATG	4 cut(s)	579, 1975, 1987, 2094
BtsIMutI	CAGTG	6 cut(s)	167, 341, 1508, 1517, 1524, 1671
Cac8I	GCNNGC	6 cut(s)	295, 750, 1053, 1131, 1331, 1354
CaiI	CAGNNNCTG	3 cut(s)	785, 1858, 1928
CciI	TCATGA	1 cut(s)	1842
CfoI	GCGC	1 cut(s)	250
Cfr10I	RCCGGY	1 cut(s)	1129
Cfr13I	GGNCC	3 cut(s)	584, 1036, 1327
ClaI	ATCGAT	1 cut(s)	936
Csp6I	GTAC	7 cut(s)	123, 158, 1212, 1409, 1995, 2092, 2110
CspCI	CAANNNNNGTGG	2 cut(s)	790, 825
CviQI	GTAC	7 cut(s)	123, 158, 1212, 1409, 1995, 2092, 2110
DpnI	GATC	9 cut(s)	76, 637, 867, 897, 935, 939, 989, 1482, 1705
DpnII	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
DraIII	CACNNNGTG	1 cut(s)	1960
DriI	GACNNNNNGTC	1 cut(s)	28
Eam1104I	CTCTTC	3 cut(s)	127, 449, 2065
Eam1105I	GACNNNNNGTC	1 cut(s)	28
EarI	CTCTTC	3 cut(s)	127, 449, 2065
Eco105I	TACGTA	1 cut(s)	1412
Eco130I	CCWWGG	2 cut(s)	1434, 1893
Eco31I	GGTCTC	2 cut(s)	1128, 2140
Eco32I	GATATC	1 cut(s)	1299
Eco47I	GGWCC	2 cut(s)	584, 1036
Eco57I	CTGAAG	1 cut(s)	365
EcoNI	CCTNNNNNAGG	1 cut(s)	649
EcoRI	GAATTC	1 cut(s)	609
EcoRII	CCWGG	1 cut(s)	1318
EcoRV	GATATC	1 cut(s)	1299
EcoT14I	CCWWGG	2 cut(s)	1434, 1893
ErhI	CCWWGG	2 cut(s)	1434, 1893
FalI	AAGNNNNNCTT	8 cut(s)	254, 286, 647, 679, 797, 829, 1436, 1468
FaqI	GGGAC	2 cut(s)	318, 674
FauI	CCCGC	1 cut(s)	1801
FbaI	TGATCA	1 cut(s)	1480
FblI	GTMKAC	1 cut(s)	1950
Fnu4HI	GCNGC	4 cut(s)	468, 1812, 1827, 2102
FokI	GGATG	4 cut(s)	586, 1962, 1974, 2101
Fsp4HI	GCNGC	4 cut(s)	468, 1812, 1827, 2102
FspBI	CTAG	8 cut(s)	141, 147, 831, 1088, 1163, 1226, 1533, 2006
GlaI	GCGC	1 cut(s)	249
GluI	GCNGC	4 cut(s)	468, 1812, 1827, 2102
GsaI	CCCAGC	2 cut(s)	962, 1932
GsuI	CTGGAG	1 cut(s)	1983
HaeIII	GGCC	1 cut(s)	1329
HapII	CCGG	7 cut(s)	542, 909, 1000, 1130, 1910, 1992, 2020
HhaI	GCGC	1 cut(s)	250
Hin6I	GCGC	1 cut(s)	248
HinP1I	GCGC	1 cut(s)	248
HincII	GTYRAC	3 cut(s)	368, 1275, 1951
HindII	GTYRAC	3 cut(s)	368, 1275, 1951
HinfI	GANTC	5 cut(s)	622, 1067, 1422, 1529, 1789
HpaI	GTTAAC	1 cut(s)	1275
HpaII	CCGG	7 cut(s)	542, 909, 1000, 1130, 1910, 1992, 2020
HphI	GGTGA	1 cut(s)	1372
Hpy166II	GTNNAC	8 cut(s)	158, 368, 1275, 1515, 1524, 1540, 1788, 1951
Hpy188I	TCNGA	3 cut(s)	105, 171, 1066
Hpy188III	TCNNGA	3 cut(s)	614, 639, 1843
Hpy8I	GTNNAC	8 cut(s)	158, 368, 1275, 1515, 1524, 1540, 1788, 1951
HpyAV	CCTTC	3 cut(s)	649, 799, 1255
HpyCH4III	ACNGT	9 cut(s)	162, 186, 332, 505, 781, 1074, 1512, 1521, 1666
HpyCH4IV	ACGT	3 cut(s)	393, 670, 1411
HpyF10VI	GCNNNNNNNGC	4 cut(s)	914, 923, 1172, 1243
HpySE526I	ACGT	3 cut(s)	393, 670, 1411
HspAI	GCGC	1 cut(s)	248
KroI	GCCGGC	1 cut(s)	1129
KroNI	GCCGGC	1 cut(s)	1131
Ksp22I	TGATCA	1 cut(s)	1480
KspAI	GTTAAC	1 cut(s)	1275
Kzo9I	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
LmnI	GCTCC	5 cut(s)	171, 435, 532, 745, 773
Lsp1109I	GCAGC	2 cut(s)	479, 1838
MaeI	CTAG	8 cut(s)	141, 147, 831, 1088, 1163, 1226, 1533, 2006
MaeII	ACGT	3 cut(s)	393, 670, 1411
MaeIII	GTNAC	6 cut(s)	180, 647, 1572, 1624, 1879, 1960
MalI	GATC	9 cut(s)	76, 637, 867, 897, 935, 939, 989, 1482, 1705
MboI	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
MfeI	CAATTG	1 cut(s)	1884
MflI	RGATCY	2 cut(s)	895, 1703
MhlI	GDGCHC	2 cut(s)	730, 1937
MluCI	AATT	8 cut(s)	609, 975, 1387, 1402, 1682, 1884, 2042, 2117
MluI	ACGCGT	1 cut(s)	1802
MlyI	GAGTC	3 cut(s)	631, 1431, 1783
MmeI	TCCRAC	3 cut(s)	25, 262, 1681
MroNI	GCCGGC	1 cut(s)	1129
MslI	CAYNNNNRTG	1 cut(s)	392
MspA1I	CMGCKG	2 cut(s)	962, 1829
MspCI	CTTAAG	1 cut(s)	1453
MspI	CCGG	7 cut(s)	542, 909, 1000, 1130, 1910, 1992, 2020
MspR9I	CCNGG	3 cut(s)	910, 1320, 1992
MunI	CAATTG	1 cut(s)	1884
Mva1269I	GAATGC	1 cut(s)	1759
MvaI	CCWGG	1 cut(s)	1320
MvnI	CGCG	2 cut(s)	85, 1804
MwoI	GCNNNNNNNGC	4 cut(s)	914, 923, 1172, 1243
NaeI	GCCGGC	1 cut(s)	1131
NciI	CCSGG	2 cut(s)	910, 1992
NcoI	CCATGG	1 cut(s)	1893
NdeII	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
NgoMIV	GCCGGC	1 cut(s)	1129
NlaIV	GGNNCC	5 cut(s)	437, 540, 643, 729, 775
NmuCI	GTSAC	4 cut(s)	647, 1624, 1879, 1960
NspI	RCATGY	1 cut(s)	2110
PagI	TCATGA	1 cut(s)	1842
PciI	ACATGT	1 cut(s)	2106
PcsI	WCGNNNNNNNCGW	1 cut(s)	1417
PctI	GAATGC	1 cut(s)	1759
PdiI	GCCGGC	1 cut(s)	1131
PfeI	GAWTC	2 cut(s)	1067, 1529
PflMI	CCANNNNNTGG	1 cut(s)	526
PkrI	GCNGC	4 cut(s)	469, 1813, 1828, 2103
PleI	GAGTC	3 cut(s)	630, 1430, 1783
PpsI	GAGTC	3 cut(s)	630, 1430, 1783
Ppu21I	YACGTR	1 cut(s)	1412
PscI	ACATGT	1 cut(s)	2106
PshBI	ATTAAT	1 cut(s)	1152
Psp6I	CCWGG	1 cut(s)	1318
PspFI	CCCAGC	2 cut(s)	958, 1928
PspGI	CCWGG	1 cut(s)	1318
PspN4I	GGNNCC	5 cut(s)	437, 540, 643, 729, 775
PspPI	GGNCC	3 cut(s)	584, 1036, 1327
PsrI	GAACNNNNNNTAC	2 cut(s)	1171, 1203
PstI	CTGCAG	2 cut(s)	790, 1828
PstNI	CAGNNNCTG	3 cut(s)	785, 1858, 1928
PsuI	RGATCY	2 cut(s)	895, 1703
PvuII	CAGCTG	2 cut(s)	962, 1829
RsaI	GTAC	7 cut(s)	124, 159, 1213, 1410, 1996, 2093, 2111
RsaNI	GTAC	7 cut(s)	123, 158, 1212, 1409, 1995, 2092, 2110
RseI	CAYNNNNRTG	1 cut(s)	392
SalI	GTCGAC	1 cut(s)	1949
SatI	GCNGC	4 cut(s)	468, 1812, 1827, 2102
Sau3AI	GATC	9 cut(s)	74, 635, 865, 895, 933, 937, 987, 1480, 1703
Sau96I	GGNCC	3 cut(s)	584, 1036, 1327
ScaI	AGTACT	1 cut(s)	1213
SchI	GAGTC	3 cut(s)	631, 1431, 1783
ScrFI	CCNGG	3 cut(s)	910, 1320, 1992
SduI	GDGCHC	2 cut(s)	730, 1937
SfcI	CTRYAG	2 cut(s)	786, 1824
SinI	GGWCC	2 cut(s)	584, 1036
SmiMI	CAYNNNNRTG	1 cut(s)	392
SmlI	CTYRAG	3 cut(s)	115, 1453, 2135
SmoI	CTYRAG	3 cut(s)	115, 1453, 2135
SnaBI	TACGTA	1 cut(s)	1412
SpeI	ACTAGT	1 cut(s)	146
Sse9I	AATT	8 cut(s)	609, 975, 1387, 1402, 1682, 1884, 2042, 2117
SsiI	CCGC	5 cut(s)	83, 599, 1794, 1812, 2101
SspI	AATATT	1 cut(s)	702
SspMI	CTAG	8 cut(s)	141, 147, 831, 1088, 1163, 1226, 1533, 2006
StyD4I	CCNGG	3 cut(s)	908, 1318, 1990
StyI	CCWWGG	2 cut(s)	1434, 1893
TaaI	ACNGT	9 cut(s)	162, 186, 332, 505, 781, 1074, 1512, 1521, 1666
TaiI	ACGT	3 cut(s)	396, 673, 1414
TaqI	TCGA	5 cut(s)	35, 936, 1420, 1620, 1950
TaqII	GACCGA	1 cut(s)	1053
TasI	AATT	8 cut(s)	609, 975, 1387, 1402, 1682, 1884, 2042, 2117
TatI	WGTACW	3 cut(s)	157, 1211, 2109
TauI	GCSGC	2 cut(s)	1814, 2104
TfiI	GAWTC	2 cut(s)	1067, 1529
TscAI	CASTG	6 cut(s)	167, 348, 1515, 1524, 1531, 1671
TseFI	GTSAC	4 cut(s)	647, 1624, 1879, 1960
TseI	GCWGC	2 cut(s)	467, 1826
Tsp45I	GTSAC	4 cut(s)	647, 1624, 1879, 1960
TspDTI	ATGAA	7 cut(s)	303, 723, 902, 1173, 1490, 1859, 1964
TspGWI	ACGGA	1 cut(s)	1415
TspRI	CASTG	6 cut(s)	167, 348, 1515, 1524, 1531, 1671
Van91I	CCANNNNNTGG	1 cut(s)	526
Vha464I	CTTAAG	1 cut(s)	1453
VpaK11BI	GGWCC	2 cut(s)	584, 1036
VspI	ATTAAT	1 cut(s)	1152
XagI	CCTNNNNNAGG	1 cut(s)	649
XapI	RAATTY	4 cut(s)	609, 1402, 1682, 2117
XceI	RCATGY	1 cut(s)	2110
XmiI	GTMKAC	1 cut(s)	1950
XspI	CTAG	8 cut(s)	141, 147, 831, 1088, 1163, 1226, 1533, 2006
ZrmI	AGTACT	1 cut(s)	1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.