Leucine-rich repeat extensin-like protein 3
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g03660 |
| prunus_persica | Prupe.3G095500_v2.0.a1 |
| rosa_laevigata | RLG00000019345 |
| rosa_multiflora | Rmu_sc0017323.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00111030 |
| rosa_rugosa | Rorug02G0312300 |
| rosa_samantha | Rh2AG365100 Rh2CG348400 Rh2DG387600 |
| rosa_wichuraiana | Rw2G029750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 87 |
| Acc36I | ACCTGC | 2 cut(s) | 87, 798 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 800 |
| AccII | CGCG | 1 cut(s) | 319 |
| AclWI | GGATC | 4 cut(s) | 187, 203, 998, 1097 |
| AcoI | YGGCCR | 2 cut(s) | 241, 311 |
| AcsI | RAATTY | 2 cut(s) | 617, 1149 |
| AcuI | CTGAAG | 2 cut(s) | 435, 882 |
| AfaI | GTAC | 5 cut(s) | 224, 381, 753, 817, 1182 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 309, 800, 1058, 1217 |
| AgeI | ACCGGT | 1 cut(s) | 1058 |
| AhlI | ACTAGT | 1 cut(s) | 748 |
| AleI | CACNNNNGTG | 1 cut(s) | 688 |
| AluBI | AGCT | 3 cut(s) | 38, 71, 740 |
| AluI | AGCT | 3 cut(s) | 38, 71, 740 |
| Alw26I | GTCTC | 1 cut(s) | 606 |
| AlwI | GGATC | 4 cut(s) | 187, 203, 998, 1097 |
| AoxI | GGCC | 3 cut(s) | 241, 248, 311 |
| ApeKI | GCWGC | 4 cut(s) | 168, 400, 1237, 1240 |
| ApoI | RAATTY | 2 cut(s) | 617, 1149 |
| AsiGI | ACCGGT | 1 cut(s) | 1058 |
| AsuHPI | GGTGA | 4 cut(s) | 462, 510, 690, 815 |
| BalI | TGGCCA | 1 cut(s) | 243 |
| BanII | GRGCYC | 1 cut(s) | 1254 |
| BbsI | GAAGAC | 1 cut(s) | 672 |
| BbvI | GCAGC | 4 cut(s) | 180, 412, 1249, 1252 |
| BccI | CCATC | 8 cut(s) | 370, 391, 472, 487, 502, 565, 592, 805 |
| BceAI | ACGGC | 1 cut(s) | 583 |
| BclI | TGATCA | 5 cut(s) | 48, 805, 925, 970, 1084 |
| BcoDI | GTCTC | 1 cut(s) | 606 |
| BcuI | ACTAGT | 1 cut(s) | 748 |
| BfaI | CTAG | 3 cut(s) | 749, 813, 1197 |
| BfmI | CTRYAG | 1 cut(s) | 1235 |
| BfuAI | ACCTGC | 2 cut(s) | 87, 798 |
| BisI | GCNGC | 7 cut(s) | 169, 314, 317, 401, 428, 1238, 1241 |
| BlsI | GCNGC | 7 cut(s) | 170, 315, 318, 402, 429, 1239, 1242 |
| BmcAI | AGTACT | 2 cut(s) | 817, 1182 |
| BmiI | GGNNCC | 5 cut(s) | 235, 555, 582, 837, 1251 |
| BpiI | GAAGAC | 1 cut(s) | 672 |
| BpmI | CTGGAG | 1 cut(s) | 804 |
| BsaJI | CCNNGG | 2 cut(s) | 308, 689 |
| BsaWI | WCCGGW | 1 cut(s) | 1058 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 309, 800, 1058, 1217 |
| Bse118I | RCCGGY | 1 cut(s) | 1058 |
| Bse1I | ACTGG | 5 cut(s) | 220, 374, 837, 1121, 1175 |
| Bse3DI | GCAATG | 2 cut(s) | 21, 178 |
| BseDI | CCNNGG | 2 cut(s) | 308, 689 |
| BseGI | GGATG | 3 cut(s) | 51, 362, 464 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 309, 800, 1058, 1217 |
| BseMI | GCAATG | 2 cut(s) | 21, 178 |
| BseNI | ACTGG | 5 cut(s) | 220, 374, 837, 1121, 1175 |
| BseRI | GAGGAG | 1 cut(s) | 297 |
| BseX3I | CGGCCG | 1 cut(s) | 311 |
| BseXI | GCAGC | 4 cut(s) | 180, 412, 1249, 1252 |
| Bsh1236I | CGCG | 1 cut(s) | 319 |
| Bsh1285I | CGRYCG | 1 cut(s) | 314 |
| BshFI | GGCC | 3 cut(s) | 243, 250, 313 |
| BshTI | ACCGGT | 1 cut(s) | 1058 |
| BsiEI | CGRYCG | 1 cut(s) | 314 |
| BsiSI | CCGG | 1 cut(s) | 1059 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 309, 800, 1058, 1217 |
| BsmAI | GTCTC | 1 cut(s) | 606 |
| BsmBI | CGTCTC | 1 cut(s) | 606 |
| BsnI | GGCC | 3 cut(s) | 243, 250, 313 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1254 |
| BspANI | GGCC | 3 cut(s) | 243, 250, 313 |
| BspFNI | CGCG | 1 cut(s) | 319 |
| BspLI | GGNNCC | 5 cut(s) | 235, 555, 582, 837, 1251 |
| BspMAI | CTGCAG | 1 cut(s) | 1239 |
| BspMI | ACCTGC | 2 cut(s) | 87, 798 |
| BspPI | GGATC | 4 cut(s) | 187, 203, 998, 1097 |
| BsrDI | GCAATG | 2 cut(s) | 21, 178 |
| BsrFI | RCCGGY | 1 cut(s) | 1058 |
| BsrI | ACTGG | 5 cut(s) | 220, 374, 837, 1121, 1175 |
| BssAI | RCCGGY | 1 cut(s) | 1058 |
| BssECI | CCNNGG | 2 cut(s) | 308, 689 |
| Bst4CI | ACNGT | 2 cut(s) | 206, 895 |
| Bst6I | CTCTTC | 1 cut(s) | 157 |
| BstC8I | GCNNGC | 2 cut(s) | 10, 1206 |
| BstDEI | CTNAG | 1 cut(s) | 34 |
| BstDSI | CCRYGG | 1 cut(s) | 689 |
| BstF5I | GGATG | 3 cut(s) | 51, 362, 464 |
| BstFNI | CGCG | 1 cut(s) | 319 |
| BstMAI | GTCTC | 1 cut(s) | 606 |
| BstMCI | CGRYCG | 1 cut(s) | 314 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 135, 595, 1237, 1249, 1258 |
| BstNSI | RCATGY | 1 cut(s) | 12 |
| BstSFI | CTRYAG | 1 cut(s) | 1235 |
| BstUI | CGCG | 1 cut(s) | 319 |
| BstV1I | GCAGC | 4 cut(s) | 180, 412, 1249, 1252 |
| BstV2I | GAAGAC | 1 cut(s) | 672 |
| BstX2I | RGATCY | 1 cut(s) | 1003 |
| BstYI | RGATCY | 1 cut(s) | 1003 |
| BstZI | CGGCCG | 1 cut(s) | 311 |
| BsuRI | GGCC | 3 cut(s) | 243, 250, 313 |
| BtgI | CCRYGG | 1 cut(s) | 689 |
| BtgZI | GCGATG | 2 cut(s) | 543, 570 |
| BtsCI | GGATG | 3 cut(s) | 51, 362, 464 |
| BtsI | GCAGTG | 5 cut(s) | 497, 854, 1106, 1232, 1256 |
| BtsIMutI | CAGTG | 6 cut(s) | 497, 830, 854, 1106, 1232, 1256 |
| BveI | ACCTGC | 2 cut(s) | 87, 798 |
| Cac8I | GCNNGC | 2 cut(s) | 10, 1206 |
| Cfr10I | RCCGGY | 1 cut(s) | 1058 |
| Csp6I | GTAC | 5 cut(s) | 223, 380, 752, 816, 1181 |
| CspAI | ACCGGT | 1 cut(s) | 1058 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 378, 405, 413, 440, 531, 558, 566, 593 |
| CviAII | CATG | 1 cut(s) | 9 |
| CviQI | GTAC | 5 cut(s) | 223, 380, 752, 816, 1181 |
| DdeI | CTNAG | 1 cut(s) | 34 |
| EaeI | YGGCCR | 2 cut(s) | 241, 311 |
| EagI | CGGCCG | 1 cut(s) | 311 |
| Eam1104I | CTCTTC | 1 cut(s) | 157 |
| EarI | CTCTTC | 1 cut(s) | 157 |
| EciI | GGCGGA | 2 cut(s) | 585, 1191 |
| EclXI | CGGCCG | 1 cut(s) | 311 |
| Eco24I | GRGCYC | 1 cut(s) | 1254 |
| Eco52I | CGGCCG | 1 cut(s) | 311 |
| Eco57I | CTGAAG | 2 cut(s) | 435, 882 |
| EcoRI | GAATTC | 1 cut(s) | 617 |
| EcoT22I | ATGCAT | 1 cut(s) | 14 |
| EcoT38I | GRGCYC | 1 cut(s) | 1254 |
| Esp3I | CGTCTC | 1 cut(s) | 606 |
| FaeI | CATG | 1 cut(s) | 12 |
| FaiI | YATR | 6 cut(s) | 10, 14, 338, 671, 920, 1217 |
| FatI | CATG | 1 cut(s) | 8 |
| FauI | CCCGC | 1 cut(s) | 784 |
| FbaI | TGATCA | 5 cut(s) | 48, 805, 925, 970, 1084 |
| Fnu4HI | GCNGC | 7 cut(s) | 169, 314, 317, 401, 428, 1238, 1241 |
| FokI | GGATG | 3 cut(s) | 38, 349, 451 |
| FriOI | GRGCYC | 1 cut(s) | 1254 |
| Fsp4HI | GCNGC | 7 cut(s) | 169, 314, 317, 401, 428, 1238, 1241 |
| FspBI | CTAG | 3 cut(s) | 749, 813, 1197 |
| GluI | GCNGC | 7 cut(s) | 169, 314, 317, 401, 428, 1238, 1241 |
| GsuI | CTGGAG | 1 cut(s) | 804 |
| HaeIII | GGCC | 3 cut(s) | 243, 250, 313 |
| HapII | CCGG | 1 cut(s) | 1059 |
| Hin1II | CATG | 1 cut(s) | 12 |
| HinfI | GANTC | 1 cut(s) | 1193 |
| HpaII | CCGG | 1 cut(s) | 1059 |
| HphI | GGTGA | 4 cut(s) | 462, 510, 690, 815 |
| Hpy188I | TCNGA | 2 cut(s) | 48, 912 |
| Hpy188III | TCNNGA | 2 cut(s) | 189, 1145 |
| HpyCH4III | ACNGT | 2 cut(s) | 206, 895 |
| HpyCH4IV | ACGT | 1 cut(s) | 102 |
| HpyCH4V | TGCA | 5 cut(s) | 12, 82, 400, 899, 1237 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 135, 595, 1237, 1249, 1258 |
| HpyF3I | CTNAG | 1 cut(s) | 34 |
| HpySE526I | ACGT | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 12 |
| Ksp22I | TGATCA | 5 cut(s) | 48, 805, 925, 970, 1084 |
| LmnI | GCTCC | 3 cut(s) | 126, 745, 1249 |
| Lsp1109I | GCAGC | 4 cut(s) | 180, 412, 1249, 1252 |
| MaeI | CTAG | 3 cut(s) | 749, 813, 1197 |
| MaeII | ACGT | 1 cut(s) | 102 |
| MaeIII | GTNAC | 1 cut(s) | 696 |
| MboII | GAAGA | 6 cut(s) | 104, 107, 122, 174, 677, 875 |
| MflI | RGATCY | 1 cut(s) | 1003 |
| MhlI | GDGCHC | 1 cut(s) | 1254 |
| MlsI | TGGCCA | 1 cut(s) | 243 |
| MluCI | AATT | 7 cut(s) | 357, 408, 435, 617, 840, 1140, 1149 |
| MluNI | TGGCCA | 1 cut(s) | 243 |
| MlyI | GAGTC | 1 cut(s) | 1202 |
| MmeI | TCCRAC | 2 cut(s) | 902, 1067 |
| Mox20I | TGGCCA | 1 cut(s) | 243 |
| Mph1103I | ATGCAT | 1 cut(s) | 14 |
| MscI | TGGCCA | 1 cut(s) | 243 |
| MseI | TTAA | 3 cut(s) | 1017, 1224, 1264 |
| MslI | CAYNNNNRTG | 1 cut(s) | 688 |
| Msp20I | TGGCCA | 1 cut(s) | 243 |
| MspI | CCGG | 1 cut(s) | 1059 |
| MvnI | CGCG | 1 cut(s) | 319 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 135, 595, 1237, 1249, 1258 |
| NlaIII | CATG | 1 cut(s) | 12 |
| NlaIV | GGNNCC | 5 cut(s) | 235, 555, 582, 837, 1251 |
| NmeAIII | GCCGAG | 1 cut(s) | 289 |
| NmuCI | GTSAC | 1 cut(s) | 696 |
| NsiI | ATGCAT | 1 cut(s) | 14 |
| NspI | RCATGY | 1 cut(s) | 12 |
| OliI | CACNNNNGTG | 1 cut(s) | 688 |
| PaeI | GCATGC | 1 cut(s) | 12 |
| PaqCI | CACCTGC | 1 cut(s) | 87 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 316 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 800 |
| PinAI | ACCGGT | 1 cut(s) | 1058 |
| PkrI | GCNGC | 7 cut(s) | 170, 315, 318, 402, 429, 1239, 1242 |
| PleI | GAGTC | 1 cut(s) | 1201 |
| PpsI | GAGTC | 1 cut(s) | 1201 |
| PspN4I | GGNNCC | 5 cut(s) | 235, 555, 582, 837, 1251 |
| PstI | CTGCAG | 1 cut(s) | 1239 |
| PsuI | RGATCY | 1 cut(s) | 1003 |
| RsaI | GTAC | 5 cut(s) | 224, 381, 753, 817, 1182 |
| RsaNI | GTAC | 5 cut(s) | 223, 380, 752, 816, 1181 |
| RseI | CAYNNNNRTG | 1 cut(s) | 688 |
| SaqAI | TTAA | 3 cut(s) | 1017, 1224, 1264 |
| SatI | GCNGC | 7 cut(s) | 169, 314, 317, 401, 428, 1238, 1241 |
| ScaI | AGTACT | 2 cut(s) | 817, 1182 |
| SchI | GAGTC | 1 cut(s) | 1202 |
| SduI | GDGCHC | 1 cut(s) | 1254 |
| SfcI | CTRYAG | 1 cut(s) | 1235 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 688 |
| SpeI | ACTAGT | 1 cut(s) | 748 |
| SphI | GCATGC | 1 cut(s) | 12 |
| Sse9I | AATT | 7 cut(s) | 357, 408, 435, 617, 840, 1140, 1149 |
| SspI | AATATT | 2 cut(s) | 942, 987 |
| SspMI | CTAG | 3 cut(s) | 749, 813, 1197 |
| TaaI | ACNGT | 2 cut(s) | 206, 895 |
| TaiI | ACGT | 1 cut(s) | 105 |
| TasI | AATT | 7 cut(s) | 357, 408, 435, 617, 840, 1140, 1149 |
| TatI | WGTACW | 2 cut(s) | 815, 1180 |
| TauI | GCSGC | 3 cut(s) | 316, 319, 430 |
| Tru1I | TTAA | 3 cut(s) | 1017, 1224, 1264 |
| Tru9I | TTAA | 3 cut(s) | 1017, 1224, 1264 |
| TscAI | CASTG | 6 cut(s) | 504, 837, 861, 1113, 1239, 1263 |
| TseFI | GTSAC | 1 cut(s) | 696 |
| TseI | GCWGC | 4 cut(s) | 168, 400, 1237, 1240 |
| Tsp45I | GTSAC | 1 cut(s) | 696 |
| TspDTI | ATGAA | 3 cut(s) | 10, 17, 678 |
| TspGWI | ACGGA | 2 cut(s) | 678, 1002 |
| TspRI | CASTG | 6 cut(s) | 504, 837, 861, 1113, 1239, 1263 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 800 |
| XapI | RAATTY | 2 cut(s) | 617, 1149 |
| XceI | RCATGY | 1 cut(s) | 12 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 227 |
| XspI | CTAG | 3 cut(s) | 749, 813, 1197 |
| ZrmI | AGTACT | 2 cut(s) | 817, 1182 |
| Zsp2I | ATGCAT | 1 cut(s) | 14 |