Rroxscaffold_2G00117000

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0014988
Physical Location & Seq
Reverse (-)
44408484 .. 44419829
11346 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00117000.1

Sequence Viewer

Length: 2151 bp
ATGATTGCTTTCTGTAAGCTCTTTTTTTCTCTACCTCTAATGTCTTCTCGACCAACCCTCTTTCTCTGCCTCAATATGTCAGCCATACTCATACTTGAAATAACATTAATCCTCAGCTGCTTATCAAACTCAGTTTCATCCACCACCGAGTTTGTCTTCAACACCAACTTCAACTCCACCAGCCTCCTTCTCAATGGAAACGCCACAATCCAATCCTCCATCCTCAGCCTCACAAATGAATCCACATTCTCTATGGGACGTGCTTTGTATGCTCAGAAAGTCCAGACAAAACTTGCCAACTCTTCATCTCCAATTCCCTTCTCAACCTCCTTCATATTCTCCCTTGCACCTGTCCAAGACCTCCAGCCCGGCCATGGTTTTGCCTTTGTGTTCCTGCCCTCTTCTGATTTAACTGGTGCCAGCTCCGCTCAGCATTTGGGTTTATTCAACTTCACCAATAATGGTGACCCCAATAACAGTATTCTTGGTATTGAATTTGATGTGTTCAAGAACCAAGAATTTGAGGATCCTAATAATAACCATGTTGGTGTGGATATTAACTCCCTCAAGTCTGTTCGTTCAGAGGCTGCAGGGCATTGGACCAGTAGTGAGGATGGTGGGAATTTCAAGGAGCTGAAACTCAATAATGGGGTCAATTACCAAGTGTGGATTGATTTTCAGGGTTCAACTATTAATGTGACGATGGCTCATGCTGGTGTTAAAAAGCCTCAGAAGCCATTGATCAGTGAGGTAGTTGATCTTTCTAGGGTGCTTTTGGATGAAATGTATGTGGGGTTTAGTGGAGCAACCGGGGCATTGGTAGAGAGCCATAGGATATTGGCTTGGAGCTTTAGTAATTCGAATTTTTCAATCGGTGACGCTTTGGTCACTCAGAATTTGCCTTCATTTGTGGTTTCTGAGGCCTACGTGTTCGGATCAAAAGAGTTTATTGTAGGAATTAGTGTTGGTAGTGTTTTGGTCATTTGGTGTGGGGTTTTGGTGTATGTGCTTTTTGTGAAGACCAAAAGGAGGAAAAGGGATGGGGAAACGGAGGACATTGAAGTTTGGGAATCGGAATATTGGCCACACCGGATTGATTATCAAGAGATTCGTAAGGCAACGGAGGGATTTTCGGAGAAAAATGTGATTGGAACTGGAGGGATTGGGAAGGTGTACAAGGGGGTACTGGCAGGAGAAGAAGTTGCAGTTAAAAGAATTTCACATGAAGGTGAAGATGGGTTGAGAGAGTTCTTGGCTGAGGTATCAAGCTTAGGAAGACTGAAGCATAGAAATTTAGTGGGATTGAGAGGTTGGTGCAAGAAAGAGAAAGGCAGCCTGATTTTGGTTTACGATTACATGAAAAATGGGAGCTTGGATAAGAGGCTATTTGATTGCACTGAGACAATGATGTTGAGTTGGGAAGAGAGAATAAAGGTCCTGAAAGATGTGGCTTGCGGGATATTGTATCTGCATGAAGGTTGGGAAGCTAAGATTTTGCATAGGGACATTAAGGCAAGCAATGTGCTGCTTGATAAGGATATGAATGCAAGGTTGGGGGATTTCGGGTTGGCCAGAATGCACCATCCGGGTGAACTGTGGGGCACAACGACACAAGTGGTTGGGACGGTGGGCTACATGGCACCAGAAGTGGTTCGAACAGGACGAGCCTCAGCTGAGATTGATGTGTTTGGTTTTGGGATATTGATCCTAGAAGTGGTGTGTGGACGAAGACCGGTTGAAGCAGGACAGCCAGGGTTGGTCGATTGGGTTTGTACATTGATGGAAAGAGGGGAAATGATTCATGGTCTTGATGAGCGGTTGAAGAGTAAAGGTGGATATAGCATTGAGGAGGTTGAGAGTTTTCTTCGTTTGGGTTTGTTGTGCGCATATCCTGAGCCTCGTGGTCGCCCAACAATGAGGCAAGTTATGAAAGTTCTGGAAGGGGCAACAGATATAAGCATTGATAGGTCTGAAGGGCAAGACGGGGAAGGAATTGAAGTAAATTTACTGCAAAAAATGATGACAACCTCAATGTGGTCTACTTACCCACTGAAGCTGGGAGGAAGGGGACACCCTACATTTGAAGATATCAAACAATCTTTAGGTTCTTCATCATTGTTTGGCTCAGACATAATTCGAGTTGGTAGATGA

Protein Analysis

716

Amino Acids

79.08

Weight (kDa)

5.78

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 50 - 288 1.1e-65 Legume lectin domain
Lectin_L-type_dom PF18483 59 - 279 2.4e-09 Legume lectin beta-barrel domain
Pkinase PF00069 378 - 644 2.7e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 380 - 645 1.7e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes (Group: OG0014988)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28350
fragaria_vesca FvH4_6g26300
malus_domestica MD09G1246400.v1.1 MD17G1239200.v1.1 MD17G1239300.v1.1
prunus_persica Prupe.3G131900_v2.0.a1
pyrus_communis pycom09g16380
rosa_chinensis RchiOBHm_Chr2g0126741
rosa_laevigata RLG00000018918
rosa_roxburghii Rroxscaffold_2G00117000
rosa_rugosa Rorug02G0264500
rosa_samantha Rh2AG321600 Rh2BG329700 Rh2CG309400 Rh2DG349000
rosa_wichuraiana Rw2G026060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 884
Acc16I TGCGCA 1 cut(s) 1885
AccB1I GGYRCC 2 cut(s) 416, 1639
AccBSI CCGCTC 2 cut(s) 428, 1816
AccI GTMKAC 1 cut(s) 2039
AciI CCGC 3 cut(s) 426, 1455, 1816
AclWI GGATC 4 cut(s) 521, 534, 943, 1699
AcoI YGGCCR 3 cut(s) 370, 1082, 1569
AcsI RAATTY 8 cut(s) 494, 518, 622, 862, 895, 1215, 1291, 2002
AcuI CTGAAG 3 cut(s) 1301, 1992, 2072
AfaI GTAC 3 cut(s) 1175, 1185, 1774
AfiI CCNNNNNNNGG 5 cut(s) 374, 1029, 1342, 1714, 2034
AflIII ACRYGT 1 cut(s) 927
AgeI ACCGGT 1 cut(s) 1732
AjiI CACGTC 1 cut(s) 260
AjnI CCWGG 1 cut(s) 1750
AjuI GAANNNNNNNTTGG 2 cut(s) 1535, 1567
Alw26I GTCTC 1 cut(s) 1394
AlwI GGATC 4 cut(s) 521, 534, 943, 1699
AlwNI CAGNNNCTG 1 cut(s) 587
AoxI GGCC 4 cut(s) 370, 921, 1082, 1569
ApeKI GCWGC 4 cut(s) 117, 587, 1332, 1525
ApoI RAATTY 8 cut(s) 494, 518, 622, 862, 895, 1215, 1291, 2002
AseI ATTAAT 2 cut(s) 107, 693
AsiGI ACCGGT 1 cut(s) 1732
Asp700I GAANNNNTTC 2 cut(s) 1650, 1797
AspLEI GCGC 1 cut(s) 1886
AspS9I GGNCC 2 cut(s) 600, 1435
AsuC2I CCSGG 3 cut(s) 369, 811, 1587
AsuHPI GGTGA 5 cut(s) 445, 476, 887, 1241, 1601
AsuII TTCGAA 2 cut(s) 860, 1654
AvaII GGWCC 2 cut(s) 600, 1435
BaeGI GKGCMC 1 cut(s) 1604
BalI TGGCCA 2 cut(s) 1084, 1571
BamHI GGATCC 1 cut(s) 526
BanI GGYRCC 2 cut(s) 416, 1639
BarI GAAGNNNNNNTAC 2 cut(s) 1989, 2021
BauI CACGAG 1 cut(s) 1899
BbsI GAAGAC 5 cut(s) 36, 148, 1025, 1282, 1735
BbvCI CCTCAGC 4 cut(s) 113, 224, 1257, 1669
BbvI GCAGC 4 cut(s) 104, 574, 1344, 1512
BccI CCATC 7 cut(s) 227, 608, 697, 1034, 1229, 1590, 1774
BciT130I CCWGG 1 cut(s) 1752
BclI TGATCA 1 cut(s) 741
BcnI CCSGG 3 cut(s) 369, 811, 1587
BcoDI GTCTC 1 cut(s) 1394
BfaI CTAG 2 cut(s) 765, 1709
BfmI CTRYAG 1 cut(s) 588
BisI GCNGC 4 cut(s) 118, 588, 1333, 1526
BlpI GCTNAGC 1 cut(s) 429
BlsI GCNGC 4 cut(s) 119, 589, 1334, 1527
Bme1390I CCNGG 4 cut(s) 369, 811, 1587, 1752
Bme18I GGWCC 2 cut(s) 600, 1435
BmgBI CACGTC 1 cut(s) 260
BmgT120I GGNCC 2 cut(s) 600, 1435
BmiI GGNNCC 3 cut(s) 418, 528, 1641
BmrFI CCNGG 4 cut(s) 369, 811, 1587, 1752
BpiI GAAGAC 5 cut(s) 36, 148, 1025, 1282, 1735
BpmI CTGGAG 2 cut(s) 347, 1176
Bpu10I CCTNAGC 6 cut(s) 113, 224, 1257, 1270, 1669, 1893
Bpu1102I GCTNAGC 1 cut(s) 429
Bpu14I TTCGAA 2 cut(s) 860, 1654
BpuEI CTTGAG 1 cut(s) 551
BpuMI CCSGG 3 cut(s) 369, 811, 1587
BsaAI YACGTR 1 cut(s) 928
BsaBI GATNNNNATC 1 cut(s) 1703
BsaJI CCNNGG 3 cut(s) 373, 810, 1751
BsaWI WCCGGW 2 cut(s) 1089, 1732
BsaXI ACNNNNNCTCC 6 cut(s) 158, 188, 838, 868, 1185, 1215
Bsc4I CCNNNNNNNGG 5 cut(s) 374, 1029, 1342, 1714, 2034
Bse118I RCCGGY 1 cut(s) 1732
Bse1I ACTGG 4 cut(s) 418, 603, 1159, 1191
Bse3DI GCAATG 1 cut(s) 1525
Bse8I GATNNNNATC 1 cut(s) 1703
BseBI CCWGG 1 cut(s) 1752
BseDI CCNNGG 3 cut(s) 373, 810, 1751
BseGI GGATG 6 cut(s) 137, 219, 619, 784, 1045, 1582
BseJI GATNNNNATC 1 cut(s) 1703
BseLI CCNNNNNNNGG 5 cut(s) 374, 1029, 1342, 1714, 2034
BseMI GCAATG 1 cut(s) 1525
BseNI ACTGG 4 cut(s) 418, 603, 1159, 1191
BseRI GAGGAG 1 cut(s) 1862
BseSI GKGCMC 1 cut(s) 1604
BseXI GCAGC 4 cut(s) 104, 574, 1344, 1512
BseYI CCCAGC 1 cut(s) 2056
BshFI GGCC 4 cut(s) 372, 923, 1084, 1571
BshNI GGYRCC 2 cut(s) 416, 1639
BshTI ACCGGT 1 cut(s) 1732
BsiSI CCGG 5 cut(s) 369, 810, 1090, 1586, 1733
BslFI GGGAC 4 cut(s) 270, 1517, 1636, 2082
BslI CCNNNNNNNGG 5 cut(s) 374, 1029, 1342, 1714, 2034
BsmAI GTCTC 1 cut(s) 1394
BsmFI GGGAC 4 cut(s) 270, 1517, 1636, 2082
BsmI GAATGC 2 cut(s) 1549, 1581
BsnI GGCC 4 cut(s) 372, 923, 1084, 1571
Bsp119I TTCGAA 2 cut(s) 860, 1654
Bsp1286I GDGCHC 1 cut(s) 1604
Bsp1407I TGTACA 2 cut(s) 1173, 1772
Bsp143I GATC 5 cut(s) 526, 741, 757, 935, 1704
Bsp1720I GCTNAGC 1 cut(s) 429
Bsp19I CCATGG 1 cut(s) 373
BspACI CCGC 3 cut(s) 426, 1455, 1816
BspANI GGCC 4 cut(s) 372, 923, 1084, 1571
BspLI GGNNCC 3 cut(s) 418, 528, 1641
BspMAI CTGCAG 1 cut(s) 592
BspPI GGATC 4 cut(s) 521, 534, 943, 1699
BspT104I TTCGAA 2 cut(s) 860, 1654
BspT107I GGYRCC 2 cut(s) 416, 1639
BsrBI CCGCTC 2 cut(s) 428, 1816
BsrDI GCAATG 1 cut(s) 1525
BsrFI RCCGGY 1 cut(s) 1732
BsrGI TGTACA 2 cut(s) 1173, 1772
BsrI ACTGG 4 cut(s) 418, 603, 1159, 1191
BssAI RCCGGY 1 cut(s) 1732
BssECI CCNNGG 3 cut(s) 373, 810, 1751
BssMI GATC 5 cut(s) 526, 741, 757, 935, 1704
BssSI CACGAG 1 cut(s) 1899
BssT1I CCWWGG 1 cut(s) 373
Bst2BI CACGAG 1 cut(s) 1899
Bst2UI CCWGG 1 cut(s) 1752
Bst4CI ACNGT 3 cut(s) 479, 1596, 1627
Bst6I CTCTTC 4 cut(s) 307, 406, 1416, 1817
BstAUI TGTACA 2 cut(s) 1173, 1772
BstBAI YACGTR 1 cut(s) 928
BstBI TTCGAA 2 cut(s) 860, 1654
BstC8I GCNNGC 3 cut(s) 421, 1453, 1516
BstDSI CCRYGG 1 cut(s) 373
BstEII GGTNACC 1 cut(s) 464
BstF5I GGATG 6 cut(s) 137, 219, 619, 784, 1045, 1582
BstHHI GCGC 1 cut(s) 1886
BstKTI GATC 5 cut(s) 529, 744, 760, 938, 1707
BstMAI GTCTC 1 cut(s) 1394
BstMBI GATC 5 cut(s) 526, 741, 757, 935, 1704
BstMWI GCNNNNNNNGC 4 cut(s) 269, 425, 733, 812
BstNI CCWGG 1 cut(s) 1752
BstPI GGTNACC 1 cut(s) 464
BstSCI CCNGG 4 cut(s) 367, 809, 1585, 1750
BstSFI CTRYAG 1 cut(s) 588
BstSLI GKGCMC 1 cut(s) 1604
BstV1I GCAGC 4 cut(s) 104, 574, 1344, 1512
BstV2I GAAGAC 5 cut(s) 36, 148, 1025, 1282, 1735
BstX2I RGATCY 1 cut(s) 526
BstYI RGATCY 1 cut(s) 526
BsuRI GGCC 4 cut(s) 372, 923, 1084, 1571
BtgI CCRYGG 1 cut(s) 373
BtrI CACGTC 1 cut(s) 260
BtsCI GGATG 6 cut(s) 137, 219, 619, 784, 1045, 1582
BtsIMutI CAGTG 3 cut(s) 751, 1395, 2048
Cac8I GCNNGC 3 cut(s) 421, 1453, 1516
CaiI CAGNNNCTG 1 cut(s) 587
CfoI GCGC 1 cut(s) 1886
Cfr10I RCCGGY 1 cut(s) 1732
Cfr13I GGNCC 2 cut(s) 600, 1435
CseI GACGC 1 cut(s) 887
Csp6I GTAC 3 cut(s) 1174, 1184, 1773
CspAI ACCGGT 1 cut(s) 1732
CspCI CAANNNNNGTGG 2 cut(s) 133, 168
CviAII CATG 8 cut(s) 374, 542, 710, 1223, 1357, 1472, 1636, 1802
CviQI GTAC 3 cut(s) 1174, 1184, 1773
DpnI GATC 5 cut(s) 528, 743, 759, 937, 1706
DpnII GATC 5 cut(s) 526, 741, 757, 935, 1704
DrdI GACNNNNNNGTC 1 cut(s) 884
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 3 cut(s) 370, 1082, 1569
Eam1104I CTCTTC 4 cut(s) 307, 406, 1416, 1817
EarI CTCTTC 4 cut(s) 307, 406, 1416, 1817
Eco130I CCWWGG 1 cut(s) 373
Eco147I AGGCCT 1 cut(s) 923
Eco32I GATATC 1 cut(s) 2089
Eco47I GGWCC 2 cut(s) 600, 1435
Eco57I CTGAAG 3 cut(s) 1301, 1992, 2072
Eco91I GGTNACC 1 cut(s) 464
EcoO109I RGGNCCY 1 cut(s) 1435
EcoO65I GGTNACC 1 cut(s) 464
EcoRII CCWGG 1 cut(s) 1750
EcoRV GATATC 1 cut(s) 2089
EcoT14I CCWWGG 1 cut(s) 373
ErhI CCWWGG 1 cut(s) 373
FaeI CATG 8 cut(s) 377, 545, 713, 1226, 1360, 1475, 1639, 1805
FaqI GGGAC 4 cut(s) 270, 1517, 1636, 2082
FatI CATG 8 cut(s) 373, 541, 709, 1222, 1356, 1471, 1635, 1801
FauI CCCGC 1 cut(s) 1448
FbaI TGATCA 1 cut(s) 741
FblI GTMKAC 1 cut(s) 2039
Fnu4HI GCNGC 4 cut(s) 118, 588, 1333, 1526
FokI GGATG 6 cut(s) 124, 206, 626, 791, 1052, 1569
Fsp4HI GCNGC 4 cut(s) 118, 588, 1333, 1526
FspAI RTGCGCAY 1 cut(s) 1885
FspBI CTAG 2 cut(s) 765, 1709
FspI TGCGCA 1 cut(s) 1885
GlaI GCGC 1 cut(s) 1885
GluI GCNGC 4 cut(s) 118, 588, 1333, 1526
GsaI CCCAGC 1 cut(s) 2060
GsuI CTGGAG 2 cut(s) 347, 1176
HaeIII GGCC 4 cut(s) 372, 923, 1084, 1571
HapII CCGG 5 cut(s) 369, 810, 1090, 1586, 1733
HgaI GACGC 1 cut(s) 887
HhaI GCGC 1 cut(s) 1886
Hin1II CATG 8 cut(s) 377, 545, 713, 1226, 1360, 1475, 1639, 1805
Hin6I GCGC 1 cut(s) 1884
HinP1I GCGC 1 cut(s) 1884
HindIII AAGCTT 1 cut(s) 1267
HinfI GANTC 4 cut(s) 239, 1070, 1108, 1798
HpaII CCGG 5 cut(s) 369, 810, 1090, 1586, 1733
HphI GGTGA 5 cut(s) 445, 476, 887, 1241, 1601
Hpy166II GTNNAC 5 cut(s) 1174, 1348, 1592, 1724, 2040
Hpy188III TCNNGA 8 cut(s) 48, 283, 508, 1103, 1438, 1808, 1892, 1937
Hpy8I GTNNAC 5 cut(s) 1174, 1348, 1592, 1724, 2040
HpyCH4III ACNGT 3 cut(s) 479, 1596, 1627
HpyCH4IV ACGT 2 cut(s) 259, 927
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 425, 733, 812
HpySE526I ACGT 2 cut(s) 259, 927
Hsp92II CATG 8 cut(s) 377, 545, 713, 1226, 1360, 1475, 1639, 1805
HspAI GCGC 1 cut(s) 1884
Ksp22I TGATCA 1 cut(s) 741
Kzo9I GATC 5 cut(s) 526, 741, 757, 935, 1704
LmnI GCTCC 5 cut(s) 428, 631, 803, 846, 1368
Lsp1109I GCAGC 4 cut(s) 104, 574, 1344, 1512
MaeI CTAG 2 cut(s) 765, 1709
MaeII ACGT 2 cut(s) 259, 927
MaeIII GTNAC 4 cut(s) 464, 697, 875, 886
MalI GATC 5 cut(s) 528, 743, 759, 937, 1706
MbiI CCGCTC 2 cut(s) 428, 1816
MboI GATC 5 cut(s) 526, 741, 757, 935, 1704
MflI RGATCY 1 cut(s) 526
MhlI GDGCHC 1 cut(s) 1604
MlsI TGGCCA 2 cut(s) 1084, 1571
MluNI TGGCCA 2 cut(s) 1084, 1571
Mox20I TGGCCA 2 cut(s) 1084, 1571
MroXI GAANNNNTTC 2 cut(s) 1650, 1797
MscI TGGCCA 2 cut(s) 1084, 1571
MseI TTAA 7 cut(s) 107, 410, 558, 693, 720, 1209, 1509
MslI CAYNNNNRTG 4 cut(s) 546, 714, 1227, 1587
Msp20I TGGCCA 2 cut(s) 1084, 1571
MspA1I CMGCKG 2 cut(s) 117, 1673
MspI CCGG 5 cut(s) 369, 810, 1090, 1586, 1733
MspR9I CCNGG 4 cut(s) 369, 811, 1587, 1752
Mva1269I GAATGC 2 cut(s) 1549, 1581
MvaI CCWGG 1 cut(s) 1752
MwoI GCNNNNNNNGC 4 cut(s) 269, 425, 733, 812
NciI CCSGG 3 cut(s) 369, 811, 1587
NcoI CCATGG 1 cut(s) 373
NdeII GATC 5 cut(s) 526, 741, 757, 935, 1704
NlaIII CATG 8 cut(s) 377, 545, 713, 1226, 1360, 1475, 1639, 1805
NlaIV GGNNCC 3 cut(s) 418, 528, 1641
NmuCI GTSAC 4 cut(s) 464, 697, 875, 886
NsbI TGCGCA 1 cut(s) 1885
NspV TTCGAA 2 cut(s) 860, 1654
PceI AGGCCT 1 cut(s) 923
PcsI WCGNNNNNNNCGW 1 cut(s) 1660
PctI GAATGC 2 cut(s) 1549, 1581
PdmI GAANNNNTTC 2 cut(s) 1650, 1797
PfeI GAWTC 4 cut(s) 239, 1070, 1108, 1798
PinAI ACCGGT 1 cut(s) 1732
PkrI GCNGC 4 cut(s) 119, 589, 1334, 1527
Ppu21I YACGTR 1 cut(s) 928
PpuMI RGGWCCY 1 cut(s) 1435
PshBI ATTAAT 2 cut(s) 107, 693
Psp5II RGGWCCY 1 cut(s) 1435
Psp6I CCWGG 1 cut(s) 1750
PspEI GGTNACC 1 cut(s) 464
PspFI CCCAGC 1 cut(s) 2056
PspGI CCWGG 1 cut(s) 1750
PspN4I GGNNCC 3 cut(s) 418, 528, 1641
PspPI GGNCC 2 cut(s) 600, 1435
PspPPI RGGWCCY 1 cut(s) 1435
PstI CTGCAG 1 cut(s) 592
PstNI CAGNNNCTG 1 cut(s) 587
PsuI RGATCY 1 cut(s) 526
PvuII CAGCTG 2 cut(s) 117, 1673
RsaI GTAC 3 cut(s) 1175, 1185, 1774
RsaNI GTAC 3 cut(s) 1174, 1184, 1773
RseI CAYNNNNRTG 4 cut(s) 546, 714, 1227, 1587
SaqAI TTAA 7 cut(s) 107, 410, 558, 693, 720, 1209, 1509
SatI GCNGC 4 cut(s) 118, 588, 1333, 1526
Sau3AI GATC 5 cut(s) 526, 741, 757, 935, 1704
Sau96I GGNCC 2 cut(s) 600, 1435
ScrFI CCNGG 4 cut(s) 369, 811, 1587, 1752
SduI GDGCHC 1 cut(s) 1604
SfcI CTRYAG 1 cut(s) 588
SfuI TTCGAA 2 cut(s) 860, 1654
SinI GGWCC 2 cut(s) 600, 1435
SmiMI CAYNNNNRTG 4 cut(s) 546, 714, 1227, 1587
SmlI CTYRAG 1 cut(s) 566
SmoI CTYRAG 1 cut(s) 566
SseBI AGGCCT 1 cut(s) 923
SsiI CCGC 3 cut(s) 426, 1455, 1816
SspI AATATT 1 cut(s) 1079
SspMI CTAG 2 cut(s) 765, 1709
StuI AGGCCT 1 cut(s) 923
StyD4I CCNGG 4 cut(s) 367, 809, 1585, 1750
StyI CCWWGG 1 cut(s) 373
TaaI ACNGT 3 cut(s) 479, 1596, 1627
TaiI ACGT 2 cut(s) 262, 930
TaqI TCGA 5 cut(s) 49, 860, 1654, 1761, 2137
TatI WGTACW 2 cut(s) 1173, 1772
TfiI GAWTC 4 cut(s) 239, 1070, 1108, 1798
Tru1I TTAA 7 cut(s) 107, 410, 558, 693, 720, 1209, 1509
Tru9I TTAA 7 cut(s) 107, 410, 558, 693, 720, 1209, 1509
TscAI CASTG 3 cut(s) 751, 1402, 2055
TseFI GTSAC 4 cut(s) 464, 697, 875, 886
TseI GCWGC 4 cut(s) 117, 587, 1332, 1525
Tsp45I GTSAC 4 cut(s) 464, 697, 875, 886
TspGWI ACGGA 2 cut(s) 1064, 1136
TspRI CASTG 3 cut(s) 751, 1402, 2055
VpaK11BI GGWCC 2 cut(s) 600, 1435
VspI ATTAAT 2 cut(s) 107, 693
XapI RAATTY 8 cut(s) 494, 518, 622, 862, 895, 1215, 1291, 2002
XcmI CCANNNNNNNNNTGG 2 cut(s) 250, 371
XmiI GTMKAC 1 cut(s) 2039
XmnI GAANNNNTTC 2 cut(s) 1650, 1797
XspI CTAG 2 cut(s) 765, 1709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.