Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0016245

Physical Location & Seq

Genomic Coordinates Reverse (-)

61189503 .. 61194940

Gene Structure 5438 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00126130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGGGTGTATTCAGACCAAGACCAACTCCCCAACTCATGGACCTCAAGGCCTTGACAAGTTGAAAGTTGATCATGGGTATGTCAAGGGAAGTGGAGTAGGGAAACCCTTTGCCCTGAAAGCCCCGGGAAAGGAGCCGGTGAGGGTTAATGCCGAGGTTAAGGCTGATAGTGGAGGAGGAGGAGGTGGGAAGGCTGTGGTTAGTAGAGAGACAGAGAGAGGCAATGTTTCAGGAAGGCTTACAGTGACGCAGACTGGAGGAGATGATGATGAAATTGTGGATGGCTGGCCAAAGTGGCTTGTTGATAATGTGCCTCAAGATGTTTTGGATGGCTTGGTTCCGAAGAGTGCTGATTCATATGACAAGCTTGCTAAGTTAGAGAAATTGGAAGGAGAAGAGGTAGGCCAAGGAACCTACAGCAATGTGTACAAAGCTCGTGATAGAGACACCAAAAAGATTGTTGCTTTGAAAAAGGTCCGGTTCGACACATCAGAGCCAGAGAGTATCAAGTTTATGGCGAGGGAGATAATGATATTACGGAGGCTAGATCATCCCAATGTCATCAAGTTTGAAGGACTAGCCACGTCAAGGATGCAATATAGTCTATATTTGGTTTTTGAATTCATGCAATACGACTTGACTAAAATAATCTCACGTCCTGAAGAGAGGCTCACTGAACCACAGGTAGAGGTAAAGTGCTATATGCAGCAACTGCTTTCTGGTCTCCAGCACTGCCATGAGAAAGGAATTCTACACAGAGACATTAAACCTTCAAACTTGCTAATAGACAAGAATGGGATGCTCAAAATTGCAGATTTTGGGCTAGCAAACTTCTTCCCTCCCAAACAAAAACGTCCTCTTACGAGCCGAGTTGTGACTCTCTGGTATAGAGCCCCAGAGCTCTTGTTAGGCTCTACAGATTACGGAGTTGGTATTGATCTTTGGAGTGCAGGATGCCTACTGGGAGAAATGTTTGTAGGAAGGCCAATTATGCCTGGGAGGACTGAGGTTGAGCAACTTCATAGAATCTTCAAGCTTTGTGGTTCCCCCTCAGATGATTACTGGAAGAAAATGAAGTTACCAACAAGCTTCCGACCCCCACATCATTACAAACCTAGTTTTGAAGAATTCTTCAGGGACTTTTCGATGCCATCATTTGGTCTGTTGATCACTCTTCTTGCTCTAGACCCAACATCTCGTGGCAGTGCTGCTTCTGGTCTCCAGACCGGATTCTTTAGTTCAAGTCCATTGGCGTGTGACCTTTCAGCTCTACCAGTGCTGTATAAAGAGGAGGATGATCTGGCTCAAAGCAAGGATCGGAAGAAGAGGGTCTACAAAGTAGGGCAATGGTCTCAAACAAACCGTGATTTTCATCAAAGAAAGGTCCAGGGAAGAGGAGAATTTGGATCGTTGAATGAGGAAAAGAATGCAGAAACTGGAAGGACACACAGCCAAGAAATGGGAAGCATATATAGCCAAGATATGGGCAACACTAGTGCAAGCAGCAGCGCTTCCTCCGGTTTTAGACCCTCCATACACGTGAACTTGAATGCATCTCTTTCCCCAATAATCCGCTCTCATCAAAAAAGATTTCCAAGCACCGAAGGTCATCCCAATGCTCTCAAGAACATTAATCCTGATGCTCTTAAAAACATCAACAACTTTACTCTCTTACAGGCCTCTATAAAAGATATTGTCAACCACACTGAAGGTGGTACATACCGGAGATCTCATTCAACGCTAGACTTCCGAAATTTTGATCCTGAGAAGATGTTTGGATTCGACAAAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

597

Amino Acids

66.72

Weight (kDa)

9.02

Isoelectric Point (pI)

41.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	131 - 412	2.3e-64	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	132 - 341	1.7e-31	Protein tyrosine and serine/threonine kinase
ABC1	PF03109	241 - 293	1e-05	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016245)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23160
malus_domestica	MD01G1014800.v1.1 MD15G1336200.v1.1
prunus_persica	Prupe.6G167000_v2.0.a1 Prupe.6G167000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0117881
rosa_laevigata	RLG00000018382
rosa_multiflora	Rmu_sc0004968.1_g000006
rosa_roxburghii	Rroxscaffold_2G00126130
rosa_rugosa	Rorug02G0214800
rosa_samantha	Rh2AG271000 Rh2BG282600 Rh2DG278900 Rh2DG296800
rosa_wichuraiana	Rw2G021430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	4 cut(s)	38, 1157, 1459, 1483
AccBSI	CCGCTC	1 cut(s)	1575
AccI	GTMKAC	1 cut(s)	1332
AciI	CCGC	1 cut(s)	1573
AclWI	GGATC	3 cut(s)	1323, 1414, 1754
AcoI	YGGCCR	1 cut(s)	287
AcsI	RAATTY	5 cut(s)	620, 747, 1127, 1400, 1753
AcuI	CTGAAG	3 cut(s)	681, 1117, 1728
AcvI	CACGTG	1 cut(s)	1540
AfaI	GTAC	2 cut(s)	428, 1717
AfeI	AGCGCT	1 cut(s)	1510
AfiI	CCNNNNNNNGG	6 cut(s)	38, 130, 588, 1157, 1459, 1483
AflIII	ACRYGT	1 cut(s)	1537
AhlI	ACTAGT	1 cut(s)	1493
AjiI	CACGTC	2 cut(s)	585, 656
AjnI	CCWGG	2 cut(s)	994, 1386
AluBI	AGCT	6 cut(s)	367, 434, 901, 1036, 1089, 1268
AluI	AGCT	6 cut(s)	367, 434, 901, 1036, 1089, 1268
Alw21I	GWGCWC	1 cut(s)	903
Alw26I	GTCTC	6 cut(s)	203, 438, 728, 753, 1223, 1356
AlwI	GGATC	3 cut(s)	1323, 1414, 1754
AlwNI	CAGNNNCTG	2 cut(s)	712, 1436
Ama87I	CYCGRG	1 cut(s)	124
Aor51HI	AGCGCT	1 cut(s)	1510
AoxI	GGCC	5 cut(s)	49, 287, 403, 983, 1677
ApeKI	GCWGC	4 cut(s)	706, 1208, 1503, 1506
ApoI	RAATTY	5 cut(s)	620, 747, 1127, 1400, 1753
AseI	ATTAAT	1 cut(s)	1632
AspLEI	GCGC	1 cut(s)	1511
AspS9I	GGNCC	3 cut(s)	41, 475, 1384
AsuC2I	CCSGG	2 cut(s)	125, 126
AsuHPI	GGTGA	1 cut(s)	151
AsuNHI	GCTAGC	1 cut(s)	823
AvaI	CYCGRG	1 cut(s)	124
AvaII	GGWCC	3 cut(s)	41, 475, 1384
BalI	TGGCCA	1 cut(s)	289
BanII	GRGCYC	2 cut(s)	895, 903
BarI	GAAGNNNNNNTAC	2 cut(s)	1316, 1348
BauI	CACGAG	2 cut(s)	435, 1197
BbrPI	CACGTG	1 cut(s)	1540
Bbv12I	GWGCWC	1 cut(s)	903
BbvI	GCAGC	4 cut(s)	718, 1195, 1515, 1518
BccI	CCATC	3 cut(s)	275, 323, 1159
BciT130I	CCWGG	2 cut(s)	996, 1388
BclI	TGATCA	2 cut(s)	70, 1167
BcnI	CCSGG	2 cut(s)	125, 126
BcoDI	GTCTC	6 cut(s)	203, 438, 728, 753, 1223, 1356
BcuI	ACTAGT	1 cut(s)	1493
BfaI	CTAG	7 cut(s)	545, 578, 824, 1116, 1184, 1494, 1742
BfmI	CTRYAG	2 cut(s)	415, 915
BfoI	RGCGCY	1 cut(s)	1512
BglI	GCCNNNNNGGC	1 cut(s)	295
BglII	AGATCT	1 cut(s)	1727
BisI	GCNGC	4 cut(s)	707, 1209, 1504, 1507
BlsI	GCNGC	4 cut(s)	708, 1210, 1505, 1508
Bme1390I	CCNGG	4 cut(s)	125, 126, 996, 1388
Bme18I	GGWCC	3 cut(s)	41, 475, 1384
BmeT110I	CYCGRG	1 cut(s)	124
BmgBI	CACGTC	2 cut(s)	585, 656
BmgT120I	GGNCC	3 cut(s)	41, 475, 1384
BmiI	GGNNCC	4 cut(s)	135, 339, 412, 1045
BmrFI	CCNGG	4 cut(s)	125, 126, 996, 1388
BmrI	ACTGGG	1 cut(s)	971
BmsI	GCATC	6 cut(s)	582, 789, 944, 1137, 1562, 1630
BmtI	GCTAGC	1 cut(s)	827
BmuI	ACTGGG	1 cut(s)	971
BpmI	CTGGAG	3 cut(s)	276, 710, 1205
BpuEI	CTTGAG	3 cut(s)	30, 300, 1607
BpuMI	CCSGG	2 cut(s)	125, 126
BsaAI	YACGTR	1 cut(s)	1540
BsaBI	GATNNNNATC	1 cut(s)	1371
BsaI	GGTCTC	3 cut(s)	728, 1223, 1356
BsaJI	CCNNGG	6 cut(s)	123, 124, 153, 406, 995, 1387
BsaWI	WCCGGW	4 cut(s)	477, 1226, 1517, 1722
BsaXI	ACNNNNNCTCC	2 cut(s)	384, 414
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 130, 588, 1157, 1459, 1483
Bse118I	RCCGGY	1 cut(s)	136
Bse1I	ACTGG	5 cut(s)	259, 966, 1067, 1274, 1441
Bse3DI	GCAATG	3 cut(s)	229, 427, 1352
Bse8I	GATNNNNATC	1 cut(s)	1371
BseBI	CCWGG	2 cut(s)	996, 1388
BseDI	CCNNGG	6 cut(s)	123, 124, 153, 406, 995, 1387
BseGI	GGATG	8 cut(s)	286, 334, 550, 597, 804, 959, 1300, 1609
BseJI	GATNNNNATC	1 cut(s)	1371
BseLI	CCNNNNNNNGG	6 cut(s)	38, 130, 588, 1157, 1459, 1483
BseMI	GCAATG	3 cut(s)	229, 427, 1352
BseMII	CTCAG	3 cut(s)	996, 1065, 1755
BseNI	ACTGG	5 cut(s)	259, 966, 1067, 1274, 1441
BseRI	GAGGAG	6 cut(s)	189, 192, 195, 273, 1304, 1410
BseXI	GCAGC	4 cut(s)	718, 1195, 1515, 1518
BsgI	GTGCAG	1 cut(s)	969
BshFI	GGCC	5 cut(s)	51, 289, 405, 985, 1679
BsiHKAI	GWGCWC	1 cut(s)	903
BsiHKCI	CYCGRG	1 cut(s)	124
BsiSI	CCGG	6 cut(s)	125, 137, 478, 1227, 1518, 1723
BslFI	GGGAC	1 cut(s)	1151
BslI	CCNNNNNNNGG	6 cut(s)	38, 130, 588, 1157, 1459, 1483
BsmAI	GTCTC	6 cut(s)	203, 438, 728, 753, 1223, 1356
BsmFI	GGGAC	1 cut(s)	1151
BsmI	GAATGC	2 cut(s)	1432, 1555
BsnI	GGCC	5 cut(s)	51, 289, 405, 985, 1679
Bso31I	GGTCTC	3 cut(s)	728, 1223, 1356
BsoBI	CYCGRG	1 cut(s)	124
Bsp1286I	GDGCHC	2 cut(s)	895, 903
Bsp1407I	TGTACA	1 cut(s)	426
Bsp143I	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
BspACI	CCGC	1 cut(s)	1573
BspANI	GGCC	5 cut(s)	51, 289, 405, 985, 1679
BspCNI	CTCAG	3 cut(s)	997, 1064, 1756
BspLI	GGNNCC	4 cut(s)	135, 339, 412, 1045
BspOI	GCTAGC	1 cut(s)	827
BspPI	GGATC	3 cut(s)	1323, 1414, 1754
BspTNI	GGTCTC	3 cut(s)	728, 1223, 1356
BsrBI	CCGCTC	1 cut(s)	1575
BsrDI	GCAATG	3 cut(s)	229, 427, 1352
BsrFI	RCCGGY	1 cut(s)	136
BsrGI	TGTACA	1 cut(s)	426
BsrI	ACTGG	5 cut(s)	259, 966, 1067, 1274, 1441
BssAI	RCCGGY	1 cut(s)	136
BssECI	CCNNGG	6 cut(s)	123, 124, 153, 406, 995, 1387
BssMI	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
BssSI	CACGAG	2 cut(s)	435, 1197
BssT1I	CCWWGG	1 cut(s)	406
Bst2BI	CACGAG	2 cut(s)	435, 1197
Bst2UI	CCWGG	2 cut(s)	996, 1388
Bst4CI	ACNGT	2 cut(s)	244, 1364
Bst6I	CTCTTC	6 cut(s)	338, 390, 657, 1179, 1319, 1387
BstAPI	GCANNNNNTGC	1 cut(s)	712
BstAUI	TGTACA	1 cut(s)	426
BstBAI	YACGTR	1 cut(s)	1540
BstC8I	GCNNGC	4 cut(s)	287, 369, 825, 1501
BstDEI	CTNAG	4 cut(s)	372, 1005, 1051, 1764
BstF5I	GGATG	8 cut(s)	286, 334, 550, 597, 804, 959, 1300, 1609
BstH2I	RGCGCY	1 cut(s)	1512
BstHHI	GCGC	1 cut(s)	1511
BstKTI	GATC	9 cut(s)	73, 550, 940, 1170, 1300, 1318, 1409, 1730, 1762
BstMAI	GTCTC	6 cut(s)	203, 438, 728, 753, 1223, 1356
BstMBI	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
BstMWI	GCNNNNNNNGC	5 cut(s)	119, 295, 712, 991, 1473
BstNI	CCWGG	2 cut(s)	996, 1388
BstSCI	CCNGG	4 cut(s)	123, 124, 994, 1386
BstSFI	CTRYAG	2 cut(s)	415, 915
BstV1I	GCAGC	4 cut(s)	718, 1195, 1515, 1518
BstX2I	RGATCY	1 cut(s)	1727
BstYI	RGATCY	1 cut(s)	1727
BsuRI	GGCC	5 cut(s)	51, 289, 405, 985, 1679
BtrI	CACGTC	2 cut(s)	585, 656
BtsCI	GGATG	8 cut(s)	286, 334, 550, 597, 804, 959, 1300, 1609
BtsI	GCAGTG	2 cut(s)	730, 1210
BtsIMutI	CAGTG	6 cut(s)	249, 672, 730, 1210, 1281, 1704
Cac8I	GCNNGC	4 cut(s)	287, 369, 825, 1501
CaiI	CAGNNNCTG	2 cut(s)	712, 1436
CfoI	GCGC	1 cut(s)	1511
Cfr10I	RCCGGY	1 cut(s)	136
Cfr13I	GGNCC	3 cut(s)	41, 475, 1384
Cfr9I	CCCGGG	1 cut(s)	124
CseI	GACGC	1 cut(s)	256
Csp6I	GTAC	2 cut(s)	427, 1716
CspCI	CAANNNNNGTGG	4 cut(s)	73, 108, 1021, 1056
CviAII	CATG	4 cut(s)	38, 74, 625, 737
CviQI	GTAC	2 cut(s)	427, 1716
DdeI	CTNAG	4 cut(s)	372, 1005, 1051, 1764
DpnI	GATC	9 cut(s)	72, 549, 939, 1169, 1299, 1317, 1408, 1729, 1761
DpnII	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
EaeI	YGGCCR	1 cut(s)	287
Eam1104I	CTCTTC	6 cut(s)	338, 390, 657, 1179, 1319, 1387
EarI	CTCTTC	6 cut(s)	338, 390, 657, 1179, 1319, 1387
Ecl136II	GAGCTC	1 cut(s)	901
Eco130I	CCWWGG	1 cut(s)	406
Eco147I	AGGCCT	2 cut(s)	51, 1679
Eco24I	GRGCYC	2 cut(s)	895, 903
Eco31I	GGTCTC	3 cut(s)	728, 1223, 1356
Eco47I	GGWCC	3 cut(s)	41, 475, 1384
Eco47III	AGCGCT	1 cut(s)	1510
Eco53kI	GAGCTC	1 cut(s)	901
Eco57I	CTGAAG	3 cut(s)	681, 1117, 1728
Eco72I	CACGTG	1 cut(s)	1540
Eco88I	CYCGRG	1 cut(s)	124
EcoICRI	GAGCTC	1 cut(s)	901
EcoRI	GAATTC	3 cut(s)	620, 747, 1127
EcoRII	CCWGG	2 cut(s)	994, 1386
EcoT14I	CCWWGG	1 cut(s)	406
EcoT22I	ATGCAT	1 cut(s)	1555
EcoT38I	GRGCYC	2 cut(s)	895, 903
ErhI	CCWWGG	1 cut(s)	406
FaeI	CATG	4 cut(s)	41, 77, 628, 740
FaqI	GGGAC	1 cut(s)	1151
FatI	CATG	4 cut(s)	37, 73, 624, 736
FauNDI	CATATG	1 cut(s)	358
FbaI	TGATCA	2 cut(s)	70, 1167
FblI	GTMKAC	1 cut(s)	1332
Fnu4HI	GCNGC	4 cut(s)	707, 1209, 1504, 1507
FokI	GGATG	8 cut(s)	293, 341, 537, 604, 811, 966, 1307, 1596
FriOI	GRGCYC	2 cut(s)	895, 903
Fsp4HI	GCNGC	4 cut(s)	707, 1209, 1504, 1507
FspBI	CTAG	7 cut(s)	545, 578, 824, 1116, 1184, 1494, 1742
GlaI	GCGC	1 cut(s)	1510
GluI	GCNGC	4 cut(s)	707, 1209, 1504, 1507
GsuI	CTGGAG	3 cut(s)	276, 710, 1205
HaeII	RGCGCY	1 cut(s)	1512
HaeIII	GGCC	5 cut(s)	51, 289, 405, 985, 1679
HapII	CCGG	6 cut(s)	125, 137, 478, 1227, 1518, 1723
HgaI	GACGC	1 cut(s)	256
HhaI	GCGC	1 cut(s)	1511
Hin1II	CATG	4 cut(s)	41, 77, 628, 740
Hin6I	GCGC	1 cut(s)	1509
HinP1I	GCGC	1 cut(s)	1509
HincII	GTYRAC	1 cut(s)	1699
HindII	GTYRAC	1 cut(s)	1699
HindIII	AAGCTT	3 cut(s)	365, 1034, 1087
HinfI	GANTC	5 cut(s)	353, 877, 1026, 1230, 1779
HpaII	CCGG	6 cut(s)	125, 137, 478, 1227, 1518, 1723
HphI	GGTGA	1 cut(s)	151
Hpy166II	GTNNAC	4 cut(s)	427, 1333, 1543, 1699
Hpy188I	TCNGA	7 cut(s)	15, 342, 493, 1054, 1094, 1320, 1751
Hpy188III	TCNNGA	9 cut(s)	231, 317, 437, 659, 1184, 1222, 1624, 1637, 1763
Hpy8I	GTNNAC	4 cut(s)	427, 1333, 1543, 1699
HpyAV	CCTTC	9 cut(s)	184, 228, 383, 566, 780, 975, 1434, 1598, 1703
HpyCH4III	ACNGT	2 cut(s)	244, 1364
HpyCH4IV	ACGT	4 cut(s)	584, 655, 853, 1539
HpyCH4V	TGCA	8 cut(s)	595, 628, 706, 812, 950, 1430, 1499, 1553
HpyF10VI	GCNNNNNNNGC	5 cut(s)	119, 295, 712, 991, 1473
HpyF3I	CTNAG	4 cut(s)	372, 1005, 1051, 1764
HpySE526I	ACGT	4 cut(s)	584, 655, 853, 1539
Hsp92II	CATG	4 cut(s)	41, 77, 628, 740
HspAI	GCGC	1 cut(s)	1509
Ksp22I	TGATCA	2 cut(s)	70, 1167
Kzo9I	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
LmnI	GCTCC	1 cut(s)	133
Lsp1109I	GCAGC	4 cut(s)	718, 1195, 1515, 1518
LweI	GCATC	6 cut(s)	582, 789, 944, 1137, 1562, 1630
MaeI	CTAG	7 cut(s)	545, 578, 824, 1116, 1184, 1494, 1742
MaeII	ACGT	4 cut(s)	584, 655, 853, 1539
MaeIII	GTNAC	4 cut(s)	244, 874, 1077, 1256
MalI	GATC	9 cut(s)	72, 549, 939, 1169, 1299, 1317, 1408, 1729, 1761
MbiI	CCGCTC	1 cut(s)	1575
MboI	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
MflI	RGATCY	1 cut(s)	1727
MhlI	GDGCHC	2 cut(s)	895, 903
MlsI	TGGCCA	1 cut(s)	289
MluCI	AATT	9 cut(s)	273, 383, 620, 747, 807, 987, 1127, 1400, 1753
MluNI	TGGCCA	1 cut(s)	289
MlyI	GAGTC	1 cut(s)	871
MmeI	TCCRAC	1 cut(s)	1117
Mox20I	TGGCCA	1 cut(s)	289
Mph1103I	ATGCAT	1 cut(s)	1555
MscI	TGGCCA	1 cut(s)	289
MseI	TTAA	5 cut(s)	147, 159, 765, 1632, 1647
MslI	CAYNNNNRTG	6 cut(s)	78, 555, 735, 1252, 1538, 1614
Msp20I	TGGCCA	1 cut(s)	289
MspI	CCGG	6 cut(s)	125, 137, 478, 1227, 1518, 1723
MspR9I	CCNGG	4 cut(s)	125, 126, 996, 1388
Mva1269I	GAATGC	2 cut(s)	1432, 1555
MvaI	CCWGG	2 cut(s)	996, 1388
MwoI	GCNNNNNNNGC	5 cut(s)	119, 295, 712, 991, 1473
NciI	CCSGG	2 cut(s)	125, 126
NdeI	CATATG	1 cut(s)	358
NdeII	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
NheI	GCTAGC	1 cut(s)	823
NlaIII	CATG	4 cut(s)	41, 77, 628, 740
NlaIV	GGNNCC	4 cut(s)	135, 339, 412, 1045
NmeAIII	GCCGAG	2 cut(s)	178, 893
NmuCI	GTSAC	3 cut(s)	244, 874, 1256
NsiI	ATGCAT	1 cut(s)	1555
PceI	AGGCCT	2 cut(s)	51, 1679
PctI	GAATGC	2 cut(s)	1432, 1555
PfeI	GAWTC	4 cut(s)	353, 1026, 1230, 1779
PflMI	CCANNNNNTGG	4 cut(s)	38, 1157, 1459, 1483
PkrI	GCNGC	4 cut(s)	708, 1210, 1505, 1508
PleI	GAGTC	1 cut(s)	871
PmaCI	CACGTG	1 cut(s)	1540
PmlI	CACGTG	1 cut(s)	1540
PpsI	GAGTC	1 cut(s)	871
Ppu21I	YACGTR	1 cut(s)	1540
PshBI	ATTAAT	1 cut(s)	1632
Psp124BI	GAGCTC	1 cut(s)	903
Psp6I	CCWGG	2 cut(s)	994, 1386
PspCI	CACGTG	1 cut(s)	1540
PspGI	CCWGG	2 cut(s)	994, 1386
PspN4I	GGNNCC	4 cut(s)	135, 339, 412, 1045
PspPI	GGNCC	3 cut(s)	41, 475, 1384
PstNI	CAGNNNCTG	2 cut(s)	712, 1436
PsuI	RGATCY	1 cut(s)	1727
RsaI	GTAC	2 cut(s)	428, 1717
RsaNI	GTAC	2 cut(s)	427, 1716
RseI	CAYNNNNRTG	6 cut(s)	78, 555, 735, 1252, 1538, 1614
SacI	GAGCTC	1 cut(s)	903
SaqAI	TTAA	5 cut(s)	147, 159, 765, 1632, 1647
SatI	GCNGC	4 cut(s)	707, 1209, 1504, 1507
Sau3AI	GATC	9 cut(s)	70, 547, 937, 1167, 1297, 1315, 1406, 1727, 1759
Sau96I	GGNCC	3 cut(s)	41, 475, 1384
SchI	GAGTC	1 cut(s)	871
ScrFI	CCNGG	4 cut(s)	125, 126, 996, 1388
SduI	GDGCHC	2 cut(s)	895, 903
SfaNI	GCATC	6 cut(s)	582, 789, 944, 1137, 1562, 1630
SfcI	CTRYAG	2 cut(s)	415, 915
SinI	GGWCC	3 cut(s)	41, 475, 1384
SmaI	CCCGGG	1 cut(s)	126
SmiMI	CAYNNNNRTG	6 cut(s)	78, 555, 735, 1252, 1538, 1614
SmlI	CTYRAG	3 cut(s)	45, 315, 1622
SmoI	CTYRAG	3 cut(s)	45, 315, 1622
SpeI	ACTAGT	1 cut(s)	1493
Sse9I	AATT	9 cut(s)	273, 383, 620, 747, 807, 987, 1127, 1400, 1753
SseBI	AGGCCT	2 cut(s)	51, 1679
SsiI	CCGC	1 cut(s)	1573
SspMI	CTAG	7 cut(s)	545, 578, 824, 1116, 1184, 1494, 1742
SstI	GAGCTC	1 cut(s)	903
StuI	AGGCCT	2 cut(s)	51, 1679
StyD4I	CCNGG	4 cut(s)	123, 124, 994, 1386
StyI	CCWWGG	1 cut(s)	406
TaaI	ACNGT	2 cut(s)	244, 1364
TaiI	ACGT	4 cut(s)	587, 658, 856, 1542
TaqI	TCGA	3 cut(s)	483, 1145, 1782
TasI	AATT	9 cut(s)	273, 383, 620, 747, 807, 987, 1127, 1400, 1753
TatI	WGTACW	1 cut(s)	426
TfiI	GAWTC	4 cut(s)	353, 1026, 1230, 1779
Tru1I	TTAA	5 cut(s)	147, 159, 765, 1632, 1647
Tru9I	TTAA	5 cut(s)	147, 159, 765, 1632, 1647
TscAI	CASTG	6 cut(s)	249, 679, 737, 1210, 1281, 1711
TseFI	GTSAC	3 cut(s)	244, 874, 1256
TseI	GCWGC	4 cut(s)	706, 1208, 1503, 1506
Tsp45I	GTSAC	3 cut(s)	244, 874, 1256
TspDTI	ATGAA	6 cut(s)	285, 345, 613, 1010, 1088, 1361
TspGWI	ACGGA	2 cut(s)	553, 939
TspMI	CCCGGG	1 cut(s)	124
TspRI	CASTG	6 cut(s)	249, 679, 737, 1210, 1281, 1711
Van91I	CCANNNNNTGG	4 cut(s)	38, 1157, 1459, 1483
VpaK11BI	GGWCC	3 cut(s)	41, 475, 1384
VspI	ATTAAT	1 cut(s)	1632
XapI	RAATTY	5 cut(s)	620, 747, 1127, 1400, 1753
XbaI	TCTAGA	1 cut(s)	1183
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1709
XmaI	CCCGGG	1 cut(s)	124
XmiI	GTMKAC	1 cut(s)	1332
XspI	CTAG	7 cut(s)	545, 578, 824, 1116, 1184, 1494, 1742
Zsp2I	ATGCAT	1 cut(s)	1555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.