Rorug02G0214800

Domain of unknown function (DUF3511)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001715
Physical Location & Seq
Forward (+)
20537512 .. 20549321
11810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0214800.1

Sequence Viewer

Length: 3162 bp
ATGGAAACTGAAAGTCAAATTGAGCTTACTATACAGAACAATATGCGTCCTCCACAAGCTGGAACATTTCAAGATCGTGAAGATCTCATCCAATATGTTCGTGATTTTGGTGCTAGTCAAGGATATGTGGTGACCATCAAGAAGTCAAGGAAAGACAGGAGAGTGATTTTAGGTTGTGATAGGGGAGGTGTTTATCGTAATAGGCGTAAAATTGATGAAAGCAAACGCAAAAGGAAGGCAAATTCACGCCTTATAAACTGTCCCTTTGAAGCCATTGGGAAAAGGGAAGATGATTTGTGGGTACTCACAATAAAGAATGGGGAGCATAATCATGAAGCATTAAAGGACATGTCAGAGCATCCTTATAGTCGTCGCTTTACTGAGGAAGAGGTCAGGCAAATCAAGCAAATGACCGAAGCTGGTATAAAACCACGTCAAGTTCTTAAGGCTCTCAAGCAAATTAATCCTGAACTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCAAAGATCCGTCAAGGAACTCTATCAGAGAAAAGTTTCAAGACATGGAGACCTGACAGGTCTGCTTTGGTGAATACAAGTTCTGCTCCCAGTGGGGGGTCATTGATGCAAAGTAACCAGCCGTTGAAGGTTCCTAATTTCATTGGAGGAAAATTCGTTGATTCACAAGGGTGTTCAATCATTGACGTAGTAAATCCTGCAACACAAGAGATTGTTTCTCATGTTCCTTTAACTACCTATGAAGAGTTCAAAGCTGCAGTTAGTTCAGCCAAGCAAGCTTTTCCTTCATGGAAAAACACACCTATTACTACACGTCAAAGAATCCTGTTTAAGCTTCAGGAGCTCATCCGCAGAGATATTGATAAACTTGCCATGAATATCACCTTAGAGCAGGGTAAGACGTTGAAGGGTGCTGAGAGTGATGTGCTCCGTGGTATAGAGGTGGTCGAACATGCTTGTGGGATGGCAACTCTACAGATGGGTGAGTTTGTTCCTAATGCATCTTATGGTATTGATACATACAGCATTAGGGAACCACTTGGTGTTTGTGCCGGGATATGCCCCTTCAACTTTCCCTCAATGATTCCATTATGGATGTTCCCAGTTGCAGTTACATGTGGCAATACATTTGTTCTCAAGCCATGTGAAAAAAATCCAGGAGTTTCGATGATACTTGCAGCACTTGCTAAGGAGGCTGGTTTGCCCGACGGTGTGTTAAATATAGTCCATGGTACTCACGACATTGTTAATTATATCTGTGATGATGATGATATAAAGGCTGTTTCACTTGTTGGCTCGAGTACAGCTGGAATGCACATACATGCAAAGGCAGTTGCTAGGGGAAAGCGTGTTCAGTCCAATATAGGAGGAAAAAATCATGCCATCATCATGCCTGATGCTAGCATGGATGCAACCTTGAATGCTCTGGTCACGGCTGGTTTTGGTGCTGCAGGACAGAGGTGTATGGCTCTTAATACAGCTGTTTTTGTTGGAAACTCAATAACATGGGAGCGTGAACTAGTGGAACGTGCCAAAGCCCTGAAAGTCAATGTGGGAACAGATCCCAGTGCAGACGTTGGTCCAGTTATTACCAAAGAGGTGAAGGATTGCATATGCAGATTAGTCCAGAGCAGTGTCGAAAGCGGTGCTAGACTCGTTCTTGATGGGAGAAATGTTATGGTTCAAGGCTATGAGAATGGAAATTTTGTTGGTCCTACTATCTTATGTGATGTTACAACCAATATGGATTGTTTTAAGGAAGAAATTTTTGGACCGGTTCTTCTGTGCATGCAGGCTGCCAGCCTAGAAGAAGCGATCACAATTATAAACAGAAACAGGTGTGGGAATGGAGCTTCCATATTCACAACATCTGGCATTGCTGCAAGGAAGTTTCAGAATGAAGTTGAGGCTGGGCTGGTTGGGATCAATGTTCCTGTCCCGGTTCCGTTGCCATTGTCCTCGTTTAACGGATCTAAGGCATCTTTTGGCAGCGATCTGAATATCTCTGGTAAGGCAGGAGTGCAATTTTACACCCAGATCAAAGCGGTTGCACAACAGTGGAAGGATTTACCTAGCTTAGAATCATCATTAGCCTTGCGTCCATCATATGAGACAAATATGACAAGCAGAGGTGTCTCTTCTTCTTTGCCTTCAACATCTGAGAGAGATTCACCTAGCCATAGAATATCAGGAGCCACAAACTCAGAATCTGAGAGTGATTCACCAAGCGAGTTGCCAAGTCGTGGAGCTCCGTTGTCCCTCCCTTCCACATCTGAGGCAGCTCTTCCAACCCAAGGAGCCTCATCTATGTCTCCAACAGCATATAGGGATTTTTCTAGTCAGGGCCTGTCCCTTGTCCTGCCAGCAACATCCGAGAGAGATCTGTCCGGTGTGGATATGTCACTAGCCATGCCTCGAGCAACAGAAAGAGATATACCAAAACAAGGTTTGACATTGACAACTTCACAATCATCAGAGAGAATGTATATGCCTCAAACTTCTCATTGGATGGAAACCTCAAGACCAACATCTCAAAGGACTGAAAATATTTCACCAAGTTCTGAGAGGCATCTTGCCTCAACATCTCAGAGGAATGACAAGAATGGCAACACGTCACTGTCATCTCAAAGGACTGGTACTTCTATGGCATTGACTTCCGAGAGCGTCTATGCCCCTGCCTCTCATGACAATATGGCTCCAATATCACTCCGAAGTGTTGGTATGACCGGAACATCTCACAGGACGGATCCCACACTACGTCCAACCACTGAGAGGGCATACATGCTGGGAGTAACTCACCTGAATGACAATATGGGTCAAACATTTCAAAGGCCCGACACCATGTTTTCAACATCTGAGAGGATGTACATGCCCGCAAAATCTCATCAGCATGATCATATGGGTTCAACATCTCGGAGAACTGATATTCCTATGCATTCAACCTCAGAGCGGATGTTCATGTCCACAGCATCTCAAAGGAATGAGGAGTTGGCTGTTGCTTCTCAACCTGCCTCCGAGAGATTATATTTGTCTCCATTAGTTCCGAGAAATGCTGGTACGCCTCAGAAGATGTTTCCCCAAAACTCTCTAATTTTGAGTGAGGAGTTTCCCTCCCAAGGAGCATCACTGACTTTACCCACATCTCAGAGGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3511

Protein Analysis

1053

Amino Acids

115.08

Weight (kDa)

8.6

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 221 - 685 1.1e-134 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 254, 1832
Acc36I ACCTGC 1 cut(s) 3022
AccB7I CCANNNNNTGG 2 cut(s) 59, 2249
AccBSI CCGCTC 1 cut(s) 2956
AciI CCGC 5 cut(s) 856, 1650, 2051, 2880, 2956
AclWI GGATC 6 cut(s) 508, 1562, 1937, 1984, 2747, 2760
AcsI RAATTY 4 cut(s) 241, 659, 1708, 1770
AcuI CTGAAG 1 cut(s) 827
AdeI CACNNNGTG 1 cut(s) 1049
AfaI GTAC 6 cut(s) 303, 1240, 1309, 2644, 2873, 3064
AfiI CCNNNNNNNGG 9 cut(s) 59, 602, 603, 2249, 2300, 2450, 2778, 2955, 3122
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 4 cut(s) 348, 818, 1121, 2616
AgeI ACCGGT 1 cut(s) 1780
AhlI ACTAGT 1 cut(s) 1525
AjiI CACGTC 3 cut(s) 434, 821, 2619
AjnI CCWGG 1 cut(s) 1162
AjuI GAANNNNNNNTTGG 4 cut(s) 1758, 1790, 2978, 3010
AleI CACNNNNGTG 2 cut(s) 676, 2062
AloI GAACNNNNNNTCC 4 cut(s) 1341, 1373, 2917, 2949
Alw21I GWGCWC 3 cut(s) 852, 936, 2257
Alw26I GTCTC 5 cut(s) 550, 2111, 2146, 2322, 3042
AlwI GGATC 6 cut(s) 508, 1562, 1937, 1984, 2747, 2760
AlwNI CAGNNNCTG 2 cut(s) 2216, 2353
Ama87I CYCGRG 2 cut(s) 1303, 2421
AoxI GGCC 2 cut(s) 2350, 2837
ApeKI GCWGC 7 cut(s) 761, 1184, 1454, 1802, 1886, 1995, 2285
ApoI RAATTY 4 cut(s) 241, 659, 1708, 1770
AseI ATTAAT 1 cut(s) 462
AsiGI ACCGGT 1 cut(s) 1780
Asp700I GAANNNNTTC 1 cut(s) 542
AspS9I GGNCC 5 cut(s) 1586, 1718, 1778, 2350, 2838
AsuC2I CCSGG 2 cut(s) 1060, 1946
AsuHPI GGTGA 9 cut(s) 142, 589, 880, 1001, 1618, 2169, 2220, 2550, 2795
AsuNHI GCTAGC 1 cut(s) 1406
AvaI CYCGRG 2 cut(s) 1303, 2421
AvaII GGWCC 3 cut(s) 1586, 1718, 1778
BamHI GGATCC 1 cut(s) 2752
BanII GRGCYC 2 cut(s) 852, 2257
Bbv12I GWGCWC 3 cut(s) 852, 936, 2257
BbvI GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2007, 2297
BccI CCATC 7 cut(s) 143, 964, 979, 1397, 1664, 2116, 2509
BceAI ACGGC 2 cut(s) 613, 1455
BcgI CGANNNNNNTGC 2 cut(s) 1634, 1668
BciT130I CCWGG 1 cut(s) 1164
BclI TGATCA 1 cut(s) 2899
BcnI CCSGG 2 cut(s) 1060, 1946
BcoDI GTCTC 5 cut(s) 550, 2111, 2146, 2322, 3042
BcuI ACTAGT 1 cut(s) 1525
BfmI CTRYAG 4 cut(s) 473, 762, 980, 1455
BfrI CTTAAG 1 cut(s) 443
BfuAI ACCTGC 1 cut(s) 3022
BglII AGATCT 2 cut(s) 82, 2386
BisI GCNGC 7 cut(s) 762, 1185, 1455, 1803, 1887, 1996, 2286
BlsI GCNGC 7 cut(s) 763, 1186, 1456, 1804, 1888, 1997, 2287
Bme1390I CCNGG 3 cut(s) 1060, 1164, 1946
Bme18I GGWCC 3 cut(s) 1586, 1718, 1778
BmeT110I CYCGRG 2 cut(s) 1303, 2421
BmgBI CACGTC 3 cut(s) 434, 821, 2619
BmgT120I GGNCC 5 cut(s) 1586, 1718, 1778, 2350, 2838
BmiI GGNNCC 7 cut(s) 639, 1041, 1950, 2200, 2305, 2703, 2754
BmrFI CCNGG 3 cut(s) 1060, 1164, 1946
BmrI ACTGGG 3 cut(s) 591, 1103, 1566
BmsI GCATC 9 cut(s) 367, 603, 1016, 1393, 1405, 1994, 2584, 2984, 3137
BmtI GCTAGC 1 cut(s) 1410
BmuI ACTGGG 3 cut(s) 591, 1103, 1566
BoxI GACNNNNGTC 1 cut(s) 1584
BplI GAGNNNNNCTC 2 cut(s) 3101, 3133
Bpu10I CCTNAGC 1 cut(s) 1194
BpuEI CTTGAG 3 cut(s) 437, 1127, 2509
BpuMI CCSGG 2 cut(s) 1060, 1946
BsaI GGTCTC 1 cut(s) 550
BsaJI CCNNGG 5 cut(s) 485, 937, 1234, 2299, 3121
BsaWI WCCGGW 3 cut(s) 1780, 2393, 2732
Bsc4I CCNNNNNNNGG 9 cut(s) 59, 602, 603, 2249, 2300, 2450, 2778, 2955, 3122
Bse118I RCCGGY 1 cut(s) 1780
Bse1I ACTGG 5 cut(s) 597, 1109, 1572, 1589, 2644
Bse3DI GCAATG 1 cut(s) 1881
BseBI CCWGG 1 cut(s) 1164
BseDI CCNNGG 5 cut(s) 485, 937, 1234, 2299, 3121
BseLI CCNNNNNNNGG 9 cut(s) 59, 602, 603, 2249, 2300, 2450, 2778, 2955, 3122
BseMI GCAATG 1 cut(s) 1881
BseNI ACTGG 5 cut(s) 597, 1109, 1572, 1589, 2644
BseRI GAGGAG 2 cut(s) 3005, 3122
BseXI GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2007, 2297
BseYI CCCAGC 2 cut(s) 1916, 2791
BsgI GTGCAG 1 cut(s) 1596
BshFI GGCC 2 cut(s) 2352, 2839
BshTI ACCGGT 1 cut(s) 1780
BsiHKAI GWGCWC 3 cut(s) 852, 936, 2257
BsiHKCI CYCGRG 2 cut(s) 1303, 2421
BsiSI CCGG 5 cut(s) 1059, 1781, 1946, 2394, 2733
BslFI GGGAC 4 cut(s) 246, 1928, 2248, 2341
BslI CCNNNNNNNGG 9 cut(s) 59, 602, 603, 2249, 2300, 2450, 2778, 2955, 3122
BsmAI GTCTC 5 cut(s) 550, 2111, 2146, 2322, 3042
BsmFI GGGAC 4 cut(s) 246, 1928, 2248, 2341
BsmI GAATGC 3 cut(s) 1323, 1432, 2941
BsnI GGCC 2 cut(s) 2352, 2839
Bso31I GGTCTC 1 cut(s) 550
BsoBI CYCGRG 2 cut(s) 1303, 2421
Bsp1286I GDGCHC 3 cut(s) 852, 936, 2257
Bsp1407I TGTACA 1 cut(s) 2871
Bsp19I CCATGG 1 cut(s) 1234
BspACI CCGC 5 cut(s) 856, 1650, 2051, 2880, 2956
BspANI GGCC 2 cut(s) 2352, 2839
BspHI TCATGA 2 cut(s) 331, 2689
BspLI GGNNCC 7 cut(s) 639, 1041, 1950, 2200, 2305, 2703, 2754
BspMAI CTGCAG 3 cut(s) 477, 766, 1459
BspMI ACCTGC 1 cut(s) 3022
BspOI GCTAGC 1 cut(s) 1410
BspPI GGATC 6 cut(s) 508, 1562, 1937, 1984, 2747, 2760
BspQI GCTCTTC 1 cut(s) 2295
BspTI CTTAAG 1 cut(s) 443
BspTNI GGTCTC 1 cut(s) 550
BsrBI CCGCTC 1 cut(s) 2956
BsrDI GCAATG 1 cut(s) 1881
BsrFI RCCGGY 1 cut(s) 1780
BsrGI TGTACA 1 cut(s) 2871
BsrI ACTGG 5 cut(s) 597, 1109, 1572, 1589, 2644
BssAI RCCGGY 1 cut(s) 1780
BssECI CCNNGG 5 cut(s) 485, 937, 1234, 2299, 3121
BssT1I CCWWGG 4 cut(s) 485, 1234, 2299, 3121
Bst2UI CCWGG 1 cut(s) 1164
Bst4CI ACNGT 4 cut(s) 260, 1217, 2064, 2625
Bst6I CTCTTC 4 cut(s) 381, 744, 2149, 2295
BstAFI CTTAAG 1 cut(s) 443
BstAPI GCANNNNNTGC 1 cut(s) 1190
BstAUI TGTACA 1 cut(s) 2871
BstC8I GCNNGC 7 cut(s) 783, 1408, 1796, 1800, 1807, 2370, 2880
BstDSI CCRYGG 2 cut(s) 937, 1234
BstEII GGTNACC 1 cut(s) 130
BstMAI GTCTC 5 cut(s) 550, 2111, 2146, 2322, 3042
BstMWI GCNNNNNNNGC 5 cut(s) 403, 782, 847, 1190, 1199
BstNI CCWGG 1 cut(s) 1164
BstNSI RCATGY 7 cut(s) 352, 962, 1125, 1331, 1798, 2791, 2878
BstPAI GACNNNNGTC 1 cut(s) 1584
BstPI GGTNACC 1 cut(s) 130
BstSCI CCNGG 3 cut(s) 1058, 1162, 1944
BstSFI CTRYAG 4 cut(s) 473, 762, 980, 1455
BstV1I GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2007, 2297
BstX2I RGATCY 6 cut(s) 82, 513, 1567, 1976, 2386, 2752
BstYI RGATCY 6 cut(s) 82, 513, 1567, 1976, 2386, 2752
BsuRI GGCC 2 cut(s) 2352, 2839
BtgI CCRYGG 2 cut(s) 937, 1234
BtrI CACGTC 3 cut(s) 434, 821, 2619
BtsI GCAGTG 1 cut(s) 1645
BtsIMutI CAGTG 7 cut(s) 604, 1579, 1645, 2069, 2621, 2772, 3131
BveI ACCTGC 1 cut(s) 3022
Cac8I GCNNGC 7 cut(s) 783, 1408, 1796, 1800, 1807, 2370, 2880
CaiI CAGNNNCTG 2 cut(s) 2216, 2353
CciI TCATGA 2 cut(s) 331, 2689
Cfr10I RCCGGY 1 cut(s) 1780
Cfr13I GGNCC 5 cut(s) 1586, 1718, 1778, 2350, 2838
CseI GACGC 3 cut(s) 35, 2093, 2659
Csp6I GTAC 6 cut(s) 302, 1239, 1308, 2643, 2872, 3063
CspAI ACCGGT 1 cut(s) 1780
CviQI GTAC 6 cut(s) 302, 1239, 1308, 2643, 2872, 3063
DraIII CACNNNGTG 1 cut(s) 1049
Eam1104I CTCTTC 4 cut(s) 381, 744, 2149, 2295
EarI CTCTTC 4 cut(s) 381, 744, 2149, 2295
Ecl136II GAGCTC 2 cut(s) 850, 2255
Eco130I CCWWGG 4 cut(s) 485, 1234, 2299, 3121
Eco24I GRGCYC 2 cut(s) 852, 2257
Eco31I GGTCTC 1 cut(s) 550
Eco47I GGWCC 3 cut(s) 1586, 1718, 1778
Eco53kI GAGCTC 2 cut(s) 850, 2255
Eco57I CTGAAG 1 cut(s) 827
Eco88I CYCGRG 2 cut(s) 1303, 2421
Eco91I GGTNACC 1 cut(s) 130
EcoICRI GAGCTC 2 cut(s) 850, 2255
EcoO109I RGGNCCY 1 cut(s) 2350
EcoO65I GGTNACC 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 1162
EcoT14I CCWWGG 4 cut(s) 485, 1234, 2299, 3121
EcoT22I ATGCAT 2 cut(s) 1009, 2943
EcoT38I GRGCYC 2 cut(s) 852, 2257
ErhI CCWWGG 4 cut(s) 485, 1234, 2299, 3121
FaqI GGGAC 4 cut(s) 246, 1928, 2248, 2341
FauI CCCGC 1 cut(s) 2887
FauNDI CATATG 3 cut(s) 1619, 2113, 2904
FbaI TGATCA 1 cut(s) 2899
Fnu4HI GCNGC 7 cut(s) 762, 1185, 1455, 1803, 1887, 1996, 2286
FriOI GRGCYC 2 cut(s) 852, 2257
Fsp4HI GCNGC 7 cut(s) 762, 1185, 1455, 1803, 1887, 1996, 2286
GluI GCNGC 7 cut(s) 762, 1185, 1455, 1803, 1887, 1996, 2286
GsaI CCCAGC 2 cut(s) 1920, 2795
HaeIII GGCC 2 cut(s) 2352, 2839
HapII CCGG 5 cut(s) 1059, 1781, 1946, 2394, 2733
HgaI GACGC 3 cut(s) 35, 2093, 2659
HincII GTYRAC 1 cut(s) 480
HindII GTYRAC 1 cut(s) 480
HindIII AAGCTT 2 cut(s) 783, 839
HinfI GANTC 8 cut(s) 668, 828, 1090, 1659, 2087, 2174, 2213, 2225
HpaII CCGG 5 cut(s) 1059, 1781, 1946, 2394, 2733
HphI GGTGA 9 cut(s) 142, 589, 880, 1001, 1618, 2169, 2220, 2550, 2795
Hpy166II GTNNAC 3 cut(s) 480, 1523, 2970
Hpy8I GTNNAC 3 cut(s) 480, 1523, 2970
Hpy99I CGWCG 2 cut(s) 375, 1217
HpyAV CCTTC 9 cut(s) 229, 628, 801, 907, 1081, 1603, 2062, 2166, 2280
HpyCH4III ACNGT 4 cut(s) 260, 1217, 2064, 2625
HpyCH4IV ACGT 8 cut(s) 433, 693, 820, 908, 1534, 1581, 2618, 2764
HpyF10VI GCNNNNNNNGC 5 cut(s) 403, 782, 847, 1190, 1199
HpySE526I ACGT 8 cut(s) 433, 693, 820, 908, 1534, 1581, 2618, 2764
Ksp22I TGATCA 1 cut(s) 2899
LguI GCTCTTC 1 cut(s) 2295
Lsp1109I GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2007, 2297
LweI GCATC 9 cut(s) 367, 603, 1016, 1393, 1405, 1994, 2584, 2984, 3137
MaeII ACGT 8 cut(s) 433, 693, 820, 908, 1534, 1581, 2618, 2764
MaeIII GTNAC 8 cut(s) 130, 620, 1117, 1435, 1738, 2406, 2619, 2797
MbiI CCGCTC 1 cut(s) 2956
MflI RGATCY 6 cut(s) 82, 513, 1567, 1976, 2386, 2752
MhlI GDGCHC 3 cut(s) 852, 936, 2257
MlyI GAGTC 1 cut(s) 1653
MmeI TCCRAC 4 cut(s) 1477, 2318, 2345, 2792
Mph1103I ATGCAT 2 cut(s) 1009, 2943
MroXI GAANNNNTTC 1 cut(s) 542
MslI CAYNNNNRTG 8 cut(s) 330, 676, 963, 1326, 1394, 2062, 2808, 2895
MspA1I CMGCKG 2 cut(s) 1313, 1487
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 5 cut(s) 1059, 1781, 1946, 2394, 2733
MspR9I CCNGG 3 cut(s) 1060, 1164, 1946
Mva1269I GAATGC 3 cut(s) 1323, 1432, 2941
MvaI CCWGG 1 cut(s) 1164
MwoI GCNNNNNNNGC 5 cut(s) 403, 782, 847, 1190, 1199
NciI CCSGG 2 cut(s) 1060, 1946
NcoI CCATGG 1 cut(s) 1234
NdeI CATATG 3 cut(s) 1619, 2113, 2904
NheI GCTAGC 1 cut(s) 1406
NlaIV GGNNCC 7 cut(s) 639, 1041, 1950, 2200, 2305, 2703, 2754
NmuCI GTSAC 4 cut(s) 130, 1435, 2406, 2619
NsiI ATGCAT 2 cut(s) 1009, 2943
NspI RCATGY 7 cut(s) 352, 962, 1125, 1331, 1798, 2791, 2878
OliI CACNNNNGTG 2 cut(s) 676, 2062
PaeI GCATGC 1 cut(s) 1798
PaeR7I CTCGAG 2 cut(s) 1303, 2421
PagI TCATGA 2 cut(s) 331, 2689
PciI ACATGT 2 cut(s) 348, 1121
PciSI GCTCTTC 1 cut(s) 2295
PcsI WCGNNNNNNNCGW 1 cut(s) 202
PctI GAATGC 3 cut(s) 1323, 1432, 2941
PdmI GAANNNNTTC 1 cut(s) 542
PfeI GAWTC 7 cut(s) 668, 828, 1090, 2087, 2174, 2213, 2225
PflMI CCANNNNNTGG 2 cut(s) 59, 2249
PfoI TCCNGGA 1 cut(s) 1162
PinAI ACCGGT 1 cut(s) 1780
PkrI GCNGC 7 cut(s) 763, 1186, 1456, 1804, 1888, 1997, 2287
PleI GAGTC 1 cut(s) 1653
PpsI GAGTC 1 cut(s) 1653
PscI ACATGT 2 cut(s) 348, 1121
PshAI GACNNNNGTC 1 cut(s) 1584
PshBI ATTAAT 1 cut(s) 462
PsiI TTATAA 2 cut(s) 254, 1832
Psp124BI GAGCTC 2 cut(s) 852, 2257
Psp6I CCWGG 1 cut(s) 1162
PspEI GGTNACC 1 cut(s) 130
PspFI CCCAGC 2 cut(s) 1916, 2791
PspGI CCWGG 1 cut(s) 1162
PspN4I GGNNCC 7 cut(s) 639, 1041, 1950, 2200, 2305, 2703, 2754
PspPI GGNCC 5 cut(s) 1586, 1718, 1778, 2350, 2838
PspXI VCTCGAGB 2 cut(s) 1303, 2421
PstI CTGCAG 3 cut(s) 477, 766, 1459
PstNI CAGNNNCTG 2 cut(s) 2216, 2353
PsuI RGATCY 6 cut(s) 82, 513, 1567, 1976, 2386, 2752
PvuII CAGCTG 2 cut(s) 1313, 1487
RsaI GTAC 6 cut(s) 303, 1240, 1309, 2644, 2873, 3064
RsaNI GTAC 6 cut(s) 302, 1239, 1308, 2643, 2872, 3063
RseI CAYNNNNRTG 8 cut(s) 330, 676, 963, 1326, 1394, 2062, 2808, 2895
SacI GAGCTC 2 cut(s) 852, 2257
SapI GCTCTTC 1 cut(s) 2295
SatI GCNGC 7 cut(s) 762, 1185, 1455, 1803, 1887, 1996, 2286
Sau96I GGNCC 5 cut(s) 1586, 1718, 1778, 2350, 2838
SchI GAGTC 1 cut(s) 1653
ScrFI CCNGG 3 cut(s) 1060, 1164, 1946
SduI GDGCHC 3 cut(s) 852, 936, 2257
SfaNI GCATC 9 cut(s) 367, 603, 1016, 1393, 1405, 1994, 2584, 2984, 3137
SfcI CTRYAG 4 cut(s) 473, 762, 980, 1455
Sfr274I CTCGAG 2 cut(s) 1303, 2421
SinI GGWCC 3 cut(s) 1586, 1718, 1778
SlaI CTCGAG 2 cut(s) 1303, 2421
SmiMI CAYNNNNRTG 8 cut(s) 330, 676, 963, 1326, 1394, 2062, 2808, 2895
SmlI CTYRAG 6 cut(s) 443, 452, 1142, 1303, 2421, 2524
SmoI CTYRAG 6 cut(s) 443, 452, 1142, 1303, 2421, 2524
SpeI ACTAGT 1 cut(s) 1525
SphI GCATGC 1 cut(s) 1798
SsiI CCGC 5 cut(s) 856, 1650, 2051, 2880, 2956
SspI AATATT 1 cut(s) 2554
SstI GAGCTC 2 cut(s) 852, 2257
StyD4I CCNGG 3 cut(s) 1058, 1162, 1944
StyI CCWWGG 4 cut(s) 485, 1234, 2299, 3121
TaaI ACNGT 4 cut(s) 260, 1217, 2064, 2625
TaiI ACGT 8 cut(s) 436, 696, 823, 911, 1537, 1584, 2621, 2767
TaqI TCGA 5 cut(s) 954, 1172, 1304, 1644, 2422
TaqII GACCGA 1 cut(s) 428
TatI WGTACW 2 cut(s) 1307, 2871
TfiI GAWTC 7 cut(s) 668, 828, 1090, 2087, 2174, 2213, 2225
TscAI CASTG 7 cut(s) 604, 1579, 1645, 2069, 2628, 2779, 3138
TseFI GTSAC 4 cut(s) 130, 1435, 2406, 2619
TseI GCWGC 7 cut(s) 761, 1184, 1454, 1802, 1886, 1995, 2285
Tsp45I GTSAC 4 cut(s) 130, 1435, 2406, 2619
TspDTI ATGAA 8 cut(s) 231, 348, 637, 762, 783, 896, 1920, 2953
TspGWI ACGGA 6 cut(s) 506, 926, 1941, 1989, 2247, 2765
TspRI CASTG 7 cut(s) 604, 1579, 1645, 2069, 2628, 2779, 3138
Van91I CCANNNNNTGG 2 cut(s) 59, 2249
Vha464I CTTAAG 1 cut(s) 443
VpaK11BI GGWCC 3 cut(s) 1586, 1718, 1778
VspI ATTAAT 1 cut(s) 462
XapI RAATTY 4 cut(s) 241, 659, 1708, 1770
XceI RCATGY 7 cut(s) 352, 962, 1125, 1331, 1798, 2791, 2878
XhoI CTCGAG 2 cut(s) 1303, 2421
XmnI GAANNNNTTC 1 cut(s) 542
Zsp2I ATGCAT 2 cut(s) 1009, 2943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.