Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001715

Physical Location & Seq

Genomic Coordinates Reverse (-)

52521820 .. 52531002

Gene Structure 9183 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG384700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGTCGGAGCCAATCATCCTCTCCGACGAAGAAGACCACATTCCGCCCTCAATCCTCTTCCACTCCGTCAAGAAACGCCGAACCGGACCCGGCCCAAACCCAAACCCTACCGTTCTAATCCTCGACGACGATGACCTCACCCCACACCAGTCCGCCGCCTCCACCTCCACGCCCTACTTTGAATCGCCGAGCTCCGACATCGAAGTTGTGAAATGCACCAGAGCCCCGTCCGGAGACCTAACTAGGGTTCATGGTTCCGGCCACAAGTCCTCTGGAATTGATGGATTGATATGTTTGGAATCTGATGACGATGACTCTGAAAGCGGTTCTGGAGGGGAAAAGGAGAAGGAGAATGAATCCATCACTAGCAGTTTCGGCATGCTAATCGATGTCCTTGCAAAGCAGCAAGAGAAGAAGCAAAGAGAAGCTCTGAAAGCTGAAGCAGCAGATATGAAAAAGATACAGAAAGAAAAGCAAAGGTGGGAGAAAGGGAAATTTGCCTTAAAATCGATTGTGGCTGAGATTGATTGTAAAGTTGTGGAACTGGGGTCATTAGGAGGAAATTTGCTTACAAGGTTTGCTGAAAGAGGGCTATCATACCGTATAAAAGCAAATCCAATTGAAAGATCAATTGTCTGGACCATGACAGTTCCAGAACACTTTTCACAGCTTTTTCCTGAAGGAATAGAGATCCAGTATATATTGCTTGTGTATGAGGCAGAAGAATTTTGTAACCTTGTCATCAAGGATTCTCTTCTGGAACATATTGCCAGGGTTCGAAGTGTTTATCCGTCTTATACAGTTTGTTATCTCATGAATAGGTCTATGGCGATGTATATTAATAATAGGGAACAAGAAGCGTACAAGAACCAAACAAATATTGGACGGACATACCCAACTGCCAAGGAGGTTGAACTGGAGTTTGCAAAGTTTACCACCAATTTTTTCAAAGTACATTCCAGGCAGTGCAGAGATGAGGTTGAACTTGCTGAACATGTTGTTGGTTTGACATGCAGCCTGTCAACCTGCAAATTTAGAAAGAAGTTAACTAGACTGGATGTAAATGCTAATGGAGCCCTTATCACGAAGGACCGCATTGACCGCGATTTATTAAAGAACAACTTATGGTTAAGAGCTTTGGTAGCTATTCCGAAGGTACAACCGCGATTTGCAAAGGCTATATGGAAGAAGTACCCTACCATGAAATCTCTTTTGAGTGTTTACATGGACCCAATAATATCTGTTCATGAAAAGGAATTTCTGCTCAAGGATTTGACAACAGAAGGCTTACTAGGTGGTGACAGAAAAGTAGGTGAGGTAGGTATCATGGCTAGGGTTTTCGTCCAGTCTACTAACATTCCTAGTGTGGTTGCCAGGCCAAAGCTTGGTCAATTTAAAGGATCTGAAAATTCTAGAAAGGCAACAAAGATGATGTGTACTTTACGAGCACCTGCATTGAGATTGAGCAGTTTCTCAGGACTCCGTAGTGTTAATGTTTTAGATATTATGGTGAAGCCTGGGCAAGACTTATATGCTAAGGTGGGAGAAGCGATCTCCTCCCGGCATCGAAAGGCTAGCAGATGTGTGCCTAAAGCCACGTCGTTTGATCGCTTCTCAGAAAAGGCAATAAAAGCGATTATGCTTGCACAAGAGGAAACAATGCGAATTGGTCACAACTTTGTTGGTACAGAGCACATACTTTTGGGTCTTGTTGGTGAAGGAACTGGAATTGCTGCCAAGGTCCTTAAATCTATGGGAATCAATCTTGAAGGGGCACGCGTTGAAGTGAAAAAGATCATTGGAACGGGTCGTGGCTTTGTTGCTATTGAAATCCCATTCACTTCTCGTGCAAAGCGAGTTTTGGAACTGTCACAGGAGGAAGCTCGACAACTGGGCCATAACTATATTGGACCTGAGCACTTGCTTTTGGGACTGCTTAGTGAAGGTGAGGGTGTGGCAGCTTGTGTTCTTAAAAATTTAGGTGCTGACTTCAGCAACATTCGCACACAGGTTATTCGTATGGTAGGTGAGAGCACAGAAGCTGTTGGTTTTGGAGCTAGACAGAACCAGTGGCAACAAAATGGTAACTCTAGAGTATGGAGCCAATTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009987 GO:0010212 GO:0010332 GO:0016787 GO:0016788 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

ERCC4

Protein Analysis

704

Amino Acids

78.38

Weight (kDa)

8.85

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	183 - 334	3e-10	ERCC4 domain
EME1-MUS81_C	PF21292	375 - 438	1.8e-06	EME1/MUS81, C-terminal
Clp_N	PF02861	537 - 659	8.7e-34	Clp repeat (R) N-terminal domain
Clp_N	PF02861	613 - 683	5.4e-17	Clp repeat (R) N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21800 AT2G21800 AT2G21800 AT2G22140 AT2G22140
fragaria_vesca	FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_5g31350 FvH4_5g31350
malus_domestica	MD15G1335700.v1.1 MD15G1404100.v1.1
prunus_persica	Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.6G166800_v2.0.a1
pyrus_communis	pycom15g28970
rosa_chinensis	RchiOBHm_Chr2g0117911 RchiOBHm_Chr7g0226601 RchiOBHm_Chr7g0226611 RchiOBHm_Chr7g0228631
rosa_laevigata	RLG00000001714 RLG00000018383
rosa_multiflora	Rmu_sc0001423.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126110 Rroxscaffold_3G00230990 Rroxscaffold_3G00232670
rosa_rugosa	Rorug02G0214800 Rorug02G0214900 Rorug02G0214900 Rorug07G0238500 Rorug07G0238600
rosa_samantha	Rh2AG271200 Rh2BG282800 Rh2DG279100 Rh2DG297000 Rh7AG386100 Rh7AG403200 Rh7BG372700 Rh7BG372800 Rh7CG405400 Rh7CG422500 Rh7DG384700
rosa_wichuraiana	Rw2G021450 Rw7G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1459
Acc36I	ACCTGC	2 cut(s)	1034, 1459
AccB7I	CCANNNNNTGG	1 cut(s)	1385
AccI	GTMKAC	1 cut(s)	1349
AccII	CGCG	3 cut(s)	1104, 1165, 1779
AccIII	TCCGGA	1 cut(s)	230
AciI	CCGC	7 cut(s)	44, 153, 156, 324, 1093, 1102, 1163
AclWI	GGATC	2 cut(s)	685, 1408
AcoI	YGGCCR	1 cut(s)	259
AcsI	RAATTY	7 cut(s)	494, 562, 725, 1031, 1256, 1408, 1975
AcuI	CTGAAG	3 cut(s)	459, 699, 1975
AfaI	GTAC	6 cut(s)	863, 954, 1158, 1193, 1438, 1687
AfiI	CCNNNNNNNGG	2 cut(s)	244, 1385
AflIII	ACRYGT	2 cut(s)	994, 1777
AgsI	TTSAA	8 cut(s)	182, 623, 914, 949, 983, 1769, 1784, 1829
AjiI	CACGTC	1 cut(s)	1599
AjnI	CCWGG	4 cut(s)	770, 959, 1373, 1516
AjuI	GAANNNNNNNTTGG	2 cut(s)	984, 1016
Alw21I	GWGCWC	5 cut(s)	194, 1450, 1695, 1920, 2036
Alw26I	GTCTC	1 cut(s)	228
AlwI	GGATC	2 cut(s)	685, 1408
AlwNI	CAGNNNCTG	1 cut(s)	2042
Aor13HI	TCCGGA	1 cut(s)	230
AoxI	GGCC	4 cut(s)	91, 259, 1376, 1894
ApeKI	GCWGC	5 cut(s)	403, 443, 1014, 1733, 1958
ApoI	RAATTY	7 cut(s)	494, 562, 725, 1031, 1256, 1408, 1975
AseI	ATTAAT	1 cut(s)	840
AspS9I	GGNCC	8 cut(s)	86, 92, 639, 1090, 1228, 1741, 1894, 1910
AsuC2I	CCSGG	2 cut(s)	90, 1561
AsuHPI	GGTGA	7 cut(s)	130, 1310, 1325, 1522, 1727, 1958, 2039
AsuII	TTCGAA	1 cut(s)	778
AsuNHI	GCTAGC	1 cut(s)	1574
AvaII	GGWCC	6 cut(s)	86, 639, 1090, 1228, 1741, 1910
BaeGI	GKGCMC	1 cut(s)	1777
BanII	GRGCYC	3 cut(s)	194, 226, 1078
BauI	CACGAG	1 cut(s)	1845
BbsI	GAAGAC	1 cut(s)	39
Bbv12I	GWGCWC	5 cut(s)	194, 1450, 1695, 1920, 2036
BbvI	GCAGC	5 cut(s)	415, 455, 1026, 1720, 1970
BccI	CCATC	2 cut(s)	275, 368
BcgI	CGANNNNNNTGC	4 cut(s)	367, 377, 401, 411
BciT130I	CCWGG	4 cut(s)	772, 961, 1375, 1518
BcnI	CCSGG	2 cut(s)	90, 1561
BcoDI	GTCTC	1 cut(s)	228
BfuAI	ACCTGC	2 cut(s)	1034, 1459
BisI	GCNGC	6 cut(s)	156, 404, 444, 1015, 1734, 1959
BlsI	GCNGC	6 cut(s)	157, 405, 445, 1016, 1735, 1960
Bme1390I	CCNGG	6 cut(s)	90, 772, 961, 1375, 1518, 1561
Bme18I	GGWCC	6 cut(s)	86, 639, 1090, 1228, 1741, 1910
BmgBI	CACGTC	1 cut(s)	1599
BmgT120I	GGNCC	8 cut(s)	86, 92, 639, 1090, 1228, 1741, 1894, 1910
BmiI	GGNNCC	6 cut(s)	9, 88, 256, 1075, 1230, 2102
BmrFI	CCNGG	6 cut(s)	90, 772, 961, 1375, 1518, 1561
BmrI	ACTGGG	2 cut(s)	554, 1901
BmsI	GCATC	1 cut(s)	1573
BmtI	GCTAGC	1 cut(s)	1578
BmuI	ACTGGG	2 cut(s)	554, 1901
BpiI	GAAGAC	1 cut(s)	39
BpmI	CTGGAG	2 cut(s)	351, 938
Bpu10I	CCTNAGC	2 cut(s)	1536, 1914
Bpu14I	TTCGAA	1 cut(s)	778
BpuEI	CTTGAG	1 cut(s)	1250
BpuMI	CCSGG	2 cut(s)	90, 1561
Bsa29I	ATCGAT	2 cut(s)	387, 509
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	4 cut(s)	771, 903, 1517, 1737
BsaWI	WCCGGW	2 cut(s)	83, 230
Bsc4I	CCNNNNNNNGG	2 cut(s)	244, 1385
Bse1I	ACTGG	9 cut(s)	148, 549, 694, 921, 1059, 1345, 1729, 1896, 2068
BseAI	TCCGGA	1 cut(s)	230
BseBI	CCWGG	4 cut(s)	772, 961, 1375, 1518
BseCI	ATCGAT	2 cut(s)	387, 509
BseDI	CCNNGG	4 cut(s)	771, 903, 1517, 1737
BseGI	GGATG	2 cut(s)	15, 1063
BseLI	CCNNNNNNNGG	2 cut(s)	244, 1385
BseMII	CTCAG	4 cut(s)	510, 1488, 1629, 1905
BseNI	ACTGG	9 cut(s)	148, 549, 694, 921, 1059, 1345, 1729, 1896, 2068
BseRI	GAGGAG	1 cut(s)	1546
BseSI	GKGCMC	1 cut(s)	1777
BseXI	GCAGC	5 cut(s)	415, 455, 1026, 1720, 1970
BsgI	GTGCAG	1 cut(s)	988
Bsh1236I	CGCG	3 cut(s)	1104, 1165, 1779
BshFI	GGCC	4 cut(s)	93, 261, 1378, 1896
BshVI	ATCGAT	2 cut(s)	387, 509
BsiHKAI	GWGCWC	5 cut(s)	194, 1450, 1695, 1920, 2036
BsiSI	CCGG	5 cut(s)	84, 90, 231, 258, 1561
BslFI	GGGAC	1 cut(s)	1944
BslI	CCNNNNNNNGG	2 cut(s)	244, 1385
BsmAI	GTCTC	1 cut(s)	228
BsmFI	GGGAC	1 cut(s)	1944
BsnI	GGCC	4 cut(s)	93, 261, 1378, 1896
Bso31I	GGTCTC	1 cut(s)	228
Bsp119I	TTCGAA	1 cut(s)	778
Bsp1286I	GDGCHC	8 cut(s)	194, 226, 1078, 1450, 1695, 1777, 1920, 2036
Bsp13I	TCCGGA	1 cut(s)	230
Bsp143I	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
BspACI	CCGC	7 cut(s)	44, 153, 156, 324, 1093, 1102, 1163
BspANI	GGCC	4 cut(s)	93, 261, 1378, 1896
BspCNI	CTCAG	4 cut(s)	511, 1487, 1628, 1906
BspDI	ATCGAT	2 cut(s)	387, 509
BspEI	TCCGGA	1 cut(s)	230
BspFNI	CGCG	3 cut(s)	1104, 1165, 1779
BspHI	TCATGA	2 cut(s)	813, 1246
BspLI	GGNNCC	6 cut(s)	9, 88, 256, 1075, 1230, 2102
BspMI	ACCTGC	2 cut(s)	1034, 1459
BspOI	GCTAGC	1 cut(s)	1578
BspPI	GGATC	2 cut(s)	685, 1408
BspT104I	TTCGAA	1 cut(s)	778
BspTNI	GGTCTC	1 cut(s)	228
BsrI	ACTGG	9 cut(s)	148, 549, 694, 921, 1059, 1345, 1729, 1896, 2068
BssECI	CCNNGG	4 cut(s)	771, 903, 1517, 1737
BssMI	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
BssSI	CACGAG	1 cut(s)	1845
BssT1I	CCWWGG	2 cut(s)	903, 1737
Bst2BI	CACGAG	1 cut(s)	1845
Bst2UI	CCWGG	4 cut(s)	772, 961, 1375, 1518
Bst4CI	ACNGT	5 cut(s)	112, 602, 649, 802, 1869
Bst6I	CTCTTC	2 cut(s)	62, 759
BstBI	TTCGAA	1 cut(s)	778
BstC8I	GCNNGC	4 cut(s)	380, 1576, 1644, 1777
BstDEI	CTNAG	6 cut(s)	519, 1474, 1536, 1615, 1914, 1937
BstF5I	GGATG	2 cut(s)	15, 1063
BstFNI	CGCG	3 cut(s)	1104, 1165, 1779
BstKTI	GATC	6 cut(s)	629, 693, 1403, 1554, 1609, 1797
BstMAI	GTCTC	1 cut(s)	228
BstMBI	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
BstMWI	GCNNNNNNNGC	8 cut(s)	375, 434, 443, 1073, 1101, 1142, 1631, 2001
BstNI	CCWGG	4 cut(s)	772, 961, 1375, 1518
BstNSI	RCATGY	3 cut(s)	382, 998, 1014
BstSCI	CCNGG	6 cut(s)	88, 770, 959, 1373, 1516, 1559
BstSLI	GKGCMC	1 cut(s)	1777
BstUI	CGCG	3 cut(s)	1104, 1165, 1779
BstV1I	GCAGC	5 cut(s)	415, 455, 1026, 1720, 1970
BstV2I	GAAGAC	1 cut(s)	39
BstX2I	RGATCY	2 cut(s)	690, 1400
BstYI	RGATCY	2 cut(s)	690, 1400
Bsu15I	ATCGAT	2 cut(s)	387, 509
BsuRI	GGCC	4 cut(s)	93, 261, 1378, 1896
BsuTUI	ATCGAT	2 cut(s)	387, 509
BtgZI	GCGATG	1 cut(s)	845
BtrI	CACGTC	1 cut(s)	1599
BtsCI	GGATG	2 cut(s)	15, 1063
BtsI	GCAGTG	1 cut(s)	971
BtsIMutI	CAGTG	2 cut(s)	971, 2075
BveI	ACCTGC	2 cut(s)	1034, 1459
Cac8I	GCNNGC	4 cut(s)	380, 1576, 1644, 1777
CaiI	CAGNNNCTG	1 cut(s)	2042
CciI	TCATGA	2 cut(s)	813, 1246
Cfr13I	GGNCC	8 cut(s)	86, 92, 639, 1090, 1228, 1741, 1894, 1910
ClaI	ATCGAT	2 cut(s)	387, 509
Csp6I	GTAC	6 cut(s)	862, 953, 1157, 1192, 1437, 1686
CspCI	CAANNNNNGTGG	2 cut(s)	1585, 1620
CviQI	GTAC	6 cut(s)	862, 953, 1157, 1192, 1437, 1686
DdeI	CTNAG	6 cut(s)	519, 1474, 1536, 1615, 1914, 1937
DpnI	GATC	6 cut(s)	628, 692, 1402, 1553, 1608, 1796
DpnII	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
DraI	TTTAAA	1 cut(s)	1396
EaeI	YGGCCR	1 cut(s)	259
Eam1104I	CTCTTC	2 cut(s)	62, 759
EarI	CTCTTC	2 cut(s)	62, 759
EciI	GGCGGA	2 cut(s)	33, 142
Ecl136II	GAGCTC	1 cut(s)	192
Eco130I	CCWWGG	2 cut(s)	903, 1737
Eco24I	GRGCYC	3 cut(s)	194, 226, 1078
Eco31I	GGTCTC	1 cut(s)	228
Eco47I	GGWCC	6 cut(s)	86, 639, 1090, 1228, 1741, 1910
Eco53kI	GAGCTC	1 cut(s)	192
Eco57I	CTGAAG	3 cut(s)	459, 699, 1975
EcoICRI	GAGCTC	1 cut(s)	192
EcoO109I	RGGNCCY	1 cut(s)	1741
EcoRII	CCWGG	4 cut(s)	770, 959, 1373, 1516
EcoT14I	CCWWGG	2 cut(s)	903, 1737
EcoT38I	GRGCYC	3 cut(s)	194, 226, 1078
ErhI	CCWWGG	2 cut(s)	903, 1737
FalI	AAGNNNNNCTT	2 cut(s)	1106, 1138
FaqI	GGGAC	1 cut(s)	1944
FblI	GTMKAC	1 cut(s)	1349
Fnu4HI	GCNGC	6 cut(s)	156, 404, 444, 1015, 1734, 1959
FokI	GGATG	2 cut(s)	2, 1070
FriOI	GRGCYC	3 cut(s)	194, 226, 1078
Fsp4HI	GCNGC	6 cut(s)	156, 404, 444, 1015, 1734, 1959
GluI	GCNGC	6 cut(s)	156, 404, 444, 1015, 1734, 1959
GsuI	CTGGAG	2 cut(s)	351, 938
HaeIII	GGCC	4 cut(s)	93, 261, 1378, 1896
HapII	CCGG	5 cut(s)	84, 90, 231, 258, 1561
HincII	GTYRAC	2 cut(s)	1023, 1047
HindII	GTYRAC	2 cut(s)	1023, 1047
HindIII	AAGCTT	1 cut(s)	1382
HinfI	GANTC	7 cut(s)	182, 299, 314, 356, 749, 1479, 1758
HpaI	GTTAAC	1 cut(s)	1047
HpaII	CCGG	5 cut(s)	84, 90, 231, 258, 1561
HphI	GGTGA	7 cut(s)	130, 1310, 1325, 1522, 1727, 1958, 2039
Hpy166II	GTNNAC	6 cut(s)	933, 1023, 1047, 1222, 1350, 1437
Hpy188I	TCNGA	9 cut(s)	7, 25, 196, 304, 319, 432, 1152, 1405, 1618
Hpy8I	GTNNAC	6 cut(s)	933, 1023, 1047, 1222, 1350, 1437
Hpy99I	CGWCG	4 cut(s)	29, 128, 131, 1603
HpyAV	CCTTC	8 cut(s)	340, 674, 1081, 1147, 1277, 1712, 1763, 1937
HpyCH4III	ACNGT	5 cut(s)	112, 602, 649, 802, 1869
HpyCH4IV	ACGT	1 cut(s)	1598
HpyF10VI	GCNNNNNNNGC	8 cut(s)	375, 434, 443, 1073, 1101, 1142, 1631, 2001
HpyF3I	CTNAG	6 cut(s)	519, 1474, 1536, 1615, 1914, 1937
HpySE526I	ACGT	1 cut(s)	1598
Kpn2I	TCCGGA	1 cut(s)	230
KspAI	GTTAAC	1 cut(s)	1047
Kzo9I	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
LmnI	GCTCC	5 cut(s)	7, 197, 1073, 2054, 2100
Lsp1109I	GCAGC	5 cut(s)	415, 455, 1026, 1720, 1970
LweI	GCATC	1 cut(s)	1573
MaeII	ACGT	1 cut(s)	1598
MaeIII	GTNAC	5 cut(s)	731, 1298, 1670, 1869, 2084
MalI	GATC	6 cut(s)	628, 692, 1402, 1553, 1608, 1796
MboI	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
MboII	GAAGA	7 cut(s)	41, 44, 49, 424, 734, 746, 1198
MfeI	CAATTG	2 cut(s)	618, 630
MflI	RGATCY	2 cut(s)	690, 1400
MhlI	GDGCHC	8 cut(s)	194, 226, 1078, 1450, 1695, 1777, 1920, 2036
MluI	ACGCGT	1 cut(s)	1777
MlyI	GAGTC	2 cut(s)	308, 1473
MmeI	TCCRAC	2 cut(s)	48, 219
MroI	TCCGGA	1 cut(s)	230
MseI	TTAA	9 cut(s)	503, 840, 1046, 1112, 1130, 1395, 1491, 1746, 1971
MspI	CCGG	5 cut(s)	84, 90, 231, 258, 1561
MspR9I	CCNGG	6 cut(s)	90, 772, 961, 1375, 1518, 1561
MunI	CAATTG	2 cut(s)	618, 630
MvaI	CCWGG	4 cut(s)	772, 961, 1375, 1518
MvnI	CGCG	3 cut(s)	1104, 1165, 1779
MwoI	GCNNNNNNNGC	8 cut(s)	375, 434, 443, 1073, 1101, 1142, 1631, 2001
NciI	CCSGG	2 cut(s)	90, 1561
NdeII	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
NheI	GCTAGC	1 cut(s)	1574
NlaIV	GGNNCC	6 cut(s)	9, 88, 256, 1075, 1230, 2102
NmeAIII	GCCGAG	1 cut(s)	213
NmuCI	GTSAC	3 cut(s)	1298, 1670, 1869
NspI	RCATGY	3 cut(s)	382, 998, 1014
NspV	TTCGAA	1 cut(s)	778
PaeI	GCATGC	1 cut(s)	382
PagI	TCATGA	2 cut(s)	813, 1246
PaqCI	CACCTGC	1 cut(s)	1459
PciI	ACATGT	1 cut(s)	994
PcsI	WCGNNNNNNNCGW	1 cut(s)	1852
PfeI	GAWTC	5 cut(s)	182, 299, 356, 749, 1758
PflMI	CCANNNNNTGG	1 cut(s)	1385
PkrI	GCNGC	6 cut(s)	157, 405, 445, 1016, 1735, 1960
PleI	GAGTC	2 cut(s)	308, 1473
PpsI	GAGTC	2 cut(s)	308, 1473
PpuMI	RGGWCCY	1 cut(s)	1741
PscI	ACATGT	1 cut(s)	994
PshBI	ATTAAT	1 cut(s)	840
Psp124BI	GAGCTC	1 cut(s)	194
Psp5II	RGGWCCY	1 cut(s)	1741
Psp6I	CCWGG	4 cut(s)	770, 959, 1373, 1516
PspGI	CCWGG	4 cut(s)	770, 959, 1373, 1516
PspN4I	GGNNCC	6 cut(s)	9, 88, 256, 1075, 1230, 2102
PspPI	GGNCC	8 cut(s)	86, 92, 639, 1090, 1228, 1741, 1894, 1910
PspPPI	RGGWCCY	1 cut(s)	1741
PstNI	CAGNNNCTG	1 cut(s)	2042
PsuI	RGATCY	2 cut(s)	690, 1400
RsaI	GTAC	6 cut(s)	863, 954, 1158, 1193, 1438, 1687
RsaNI	GTAC	6 cut(s)	862, 953, 1157, 1192, 1437, 1686
SacI	GAGCTC	1 cut(s)	194
SaqAI	TTAA	9 cut(s)	503, 840, 1046, 1112, 1130, 1395, 1491, 1746, 1971
SatI	GCNGC	6 cut(s)	156, 404, 444, 1015, 1734, 1959
Sau3AI	GATC	6 cut(s)	626, 690, 1400, 1551, 1606, 1794
Sau96I	GGNCC	8 cut(s)	86, 92, 639, 1090, 1228, 1741, 1894, 1910
SchI	GAGTC	2 cut(s)	308, 1473
ScrFI	CCNGG	6 cut(s)	90, 772, 961, 1375, 1518, 1561
SduI	GDGCHC	8 cut(s)	194, 226, 1078, 1450, 1695, 1777, 1920, 2036
SfaNI	GCATC	1 cut(s)	1573
SfuI	TTCGAA	1 cut(s)	778
SinI	GGWCC	6 cut(s)	86, 639, 1090, 1228, 1741, 1910
SmlI	CTYRAG	1 cut(s)	1265
SmoI	CTYRAG	1 cut(s)	1265
SphI	GCATGC	1 cut(s)	382
SsiI	CCGC	7 cut(s)	44, 153, 156, 324, 1093, 1102, 1163
SspI	AATATT	1 cut(s)	880
SstI	GAGCTC	1 cut(s)	194
StyD4I	CCNGG	6 cut(s)	88, 770, 959, 1373, 1516, 1559
StyI	CCWWGG	2 cut(s)	903, 1737
TaaI	ACNGT	5 cut(s)	112, 602, 649, 802, 1869
TaiI	ACGT	1 cut(s)	1601
TaqI	TCGA	7 cut(s)	123, 201, 387, 509, 778, 1567, 1885
TatI	WGTACW	2 cut(s)	952, 1436
TauI	GCSGC	1 cut(s)	158
TfiI	GAWTC	5 cut(s)	182, 299, 356, 749, 1758
Tru1I	TTAA	9 cut(s)	503, 840, 1046, 1112, 1130, 1395, 1491, 1746, 1971
Tru9I	TTAA	9 cut(s)	503, 840, 1046, 1112, 1130, 1395, 1491, 1746, 1971
TscAI	CASTG	2 cut(s)	971, 2075
TseFI	GTSAC	3 cut(s)	1298, 1670, 1869
TseI	GCWGC	5 cut(s)	403, 443, 1014, 1733, 1958
Tsp45I	GTSAC	3 cut(s)	1298, 1670, 1869
TspDTI	ATGAA	7 cut(s)	239, 369, 467, 830, 1217, 1235, 1263
TspGWI	ACGGA	4 cut(s)	55, 780, 901, 1472
TspRI	CASTG	2 cut(s)	971, 2075
Van91I	CCANNNNNTGG	1 cut(s)	1385
VpaK11BI	GGWCC	6 cut(s)	86, 639, 1090, 1228, 1741, 1910
VspI	ATTAAT	1 cut(s)	840
XapI	RAATTY	7 cut(s)	494, 562, 725, 1031, 1256, 1408, 1975
XbaI	TCTAGA	2 cut(s)	1412, 2090
XceI	RCATGY	3 cut(s)	382, 998, 1014
XcmI	CCANNNNNNNNNTGG	3 cut(s)	269, 878, 1904
XmiI	GTMKAC	1 cut(s)	1349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.