Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001715

Physical Location & Seq

Genomic Coordinates Forward (+)

18334537 .. 18344204

Gene Structure 9668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00232670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGTCGGAGCCAATCATCCTCTCCGACGAAGAAGACCACATTCCGCCCTCAATCCTCTTCCACTCCGTCAAGAAACGCCGAACCGGACCCGGCCCAAACCCAAACCCTACTGTTCTAATCCTCGACGACGATGACCTCACCCCACACCAGTCCACCGCCTCCACCTCCACGCCCTACTTTGAATCGCCGAGCTCCGACATCGAAGTTGTGAAATGCACCAGAGCCCCGTCCGGAGACCTAAACAAGTCCTCCGGAATTAATGTGTTGATATGTTTGGAATCTGATGACGATGACTCTGAAAGCGGTTCTGGAGGGGAAAAGGAGAAGGAGAATGAATCCATCACTAGCAGTTTCGGCATGGTGGAGGACTTGGATTTGAGTTATAGAGATGTTACGATGACATGTTCTCTTGAAGCTCTGAAAGCTGAAGCAGCAGATATGAAAAAGATACAGAAAGAAAAGCAAAGGTGGGAGAAAGGGAAATTTGCCTTAAAATCGATTGTGGCTGAGATTGATTGTCAAGTTGTGGAACTGGGGTCATTAGGAGGAAATTTGCTTACAAGGTTAGCTGAAAGAGGGCTATCATACCGTATAAAAGCAAATCCAATTGAAAGATCAATTGTCTGGACCATGACAGTTCCAGAACCCTTTTCACAGATTGATACAGGACAGCACAAGCTTTTTCCTGAAGGAATAGAGATCCAGTATATATTGCTTGTGTATGAGGCAGAAGAATTTTGTAACCTTGTCATCAAGGATTCTCTTCTGGAACATATTGCCAGGGTTCGAAGTATTTATCCATCTCATACAGTTTGTTATCTCATGAATAGGTCTATGGCGATGTACATTAATAATAGGGAACAAGAAGCGTACAAGAACCAAACAAATATTGGACGGACATACCCAACTGCCAAGGAGGTTGAACTGGAGTTTGCAAAGTTTACCACCAATTTTTTCAAAGTACATTCCAGGCAGTGCAGAGATGAGGTTGAACTTGCTGAACATGTTGTTGGTTTGACATGCAGCCTGTCAACCTGCAAATTTAGAAAGAAGTTAACTAGACTGGATGTAAATGCTAATGGAACCCTTATCACGAAGGACCGCATTGACCGCGATTTATTAAAGAACAACTTATGGTTAAGAGCTTTGGTAGCTATTCCGAAGGTACAACCGCGATTTGCTAAGGCTATATGGAAGAAGTACCCTACCATGAAATCTCTTTTGAGTGTTTACATGGACCCAATAATATCAGTTCATGAAAAGGAATTTCTGCTCAAGGATTTGACAACAGAAGACTCACTAGGTGGTGACAGAAAAGTAGGTGAGGTAGGTATCATGGCTAGGGTTTTCGTCCAGTCTACTAATATTCCTAGTGTGGTTGCCGGGCGAAAGCTTGGTCAATTCAAAGGATCTGAAAATTCTAGAAAGGCAACAAAGATGATGTGTACTTTACGAGCACCTGCATTGAGATTGAGCAGTTTCTCAGGGCTCTGTAGTGTTAATGTTTTAGATATTATGGTGAAGCCTGGGCAAGACTTATATTCTAAGGTTATTCGTATGGTAGGTGAGAGCACAGAAGCTGCCGGTGTTGGAGCTAAACAGGGAACCAGTGGCAACACAATGCCGACTCTAGAGGAGTATGGAACCAATTTGACCAAGTTAGCAGAGGAGGGAAAGGCGGATGAACAGGATCTGTCACAGAAGGAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009987 GO:0010212 GO:0010332 GO:0016787 GO:0016788 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

ERCC4

Protein Analysis

570

Amino Acids

63.54

Weight (kDa)

5.89

Isoelectric Point (pI)

39.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	180 - 337	6.8e-10	ERCC4 domain
EME1-MUS81_C	PF21292	378 - 441	1.4e-06	EME1/MUS81, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21800 AT2G21800 AT2G21800 AT2G22140 AT2G22140
fragaria_vesca	FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_5g31350 FvH4_5g31350
malus_domestica	MD15G1335700.v1.1 MD15G1404100.v1.1
prunus_persica	Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.6G166800_v2.0.a1
pyrus_communis	pycom15g28970
rosa_chinensis	RchiOBHm_Chr2g0117911 RchiOBHm_Chr7g0226601 RchiOBHm_Chr7g0226611 RchiOBHm_Chr7g0228631
rosa_laevigata	RLG00000001714 RLG00000018383
rosa_multiflora	Rmu_sc0001423.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126110 Rroxscaffold_3G00230990 Rroxscaffold_3G00232670
rosa_rugosa	Rorug02G0214800 Rorug02G0214900 Rorug02G0214900 Rorug07G0238500 Rorug07G0238600
rosa_samantha	Rh2AG271200 Rh2BG282800 Rh2DG279100 Rh2DG297000 Rh7AG386100 Rh7AG403200 Rh7BG372700 Rh7BG372800 Rh7CG405400 Rh7CG422500 Rh7DG384700
rosa_wichuraiana	Rw2G021450 Rw7G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1468
Acc36I	ACCTGC	2 cut(s)	1043, 1468
AccI	GTMKAC	1 cut(s)	1358
AccII	CGCG	2 cut(s)	1113, 1174
AccIII	TCCGGA	2 cut(s)	230, 251
AciI	CCGC	7 cut(s)	44, 156, 303, 1102, 1111, 1172, 1679
AclWI	GGATC	3 cut(s)	694, 1417, 1698
AcsI	RAATTY	6 cut(s)	482, 550, 734, 1040, 1265, 1417
AcuI	CTGAAG	2 cut(s)	447, 708
AdeI	CACNNNGTG	1 cut(s)	1304
AfaI	GTAC	6 cut(s)	845, 872, 963, 1167, 1202, 1447
AflIII	ACRYGT	2 cut(s)	401, 1003
AgsI	TTSAA	7 cut(s)	182, 413, 611, 923, 958, 992, 1405
AjnI	CCWGG	3 cut(s)	779, 968, 1525
AjuI	GAANNNNNNNTTGG	2 cut(s)	993, 1025
Alw21I	GWGCWC	3 cut(s)	194, 1459, 1574
Alw26I	GTCTC	1 cut(s)	228
AlwI	GGATC	3 cut(s)	694, 1417, 1698
AlwNI	CAGNNNCTG	2 cut(s)	1580, 1693
Aor13HI	TCCGGA	2 cut(s)	230, 251
AoxI	GGCC	1 cut(s)	91
ApeKI	GCWGC	3 cut(s)	431, 1023, 1580
ApoI	RAATTY	6 cut(s)	482, 550, 734, 1040, 1265, 1417
ArsI	GACNNNNNNTTYG	2 cut(s)	1381, 1413
AseI	ATTAAT	2 cut(s)	258, 849
AspS9I	GGNCC	5 cut(s)	86, 92, 627, 1099, 1237
AsuC2I	CCSGG	2 cut(s)	90, 1384
AsuHPI	GGTGA	5 cut(s)	130, 1319, 1334, 1531, 1577
AsuII	TTCGAA	1 cut(s)	787
AvaII	GGWCC	4 cut(s)	86, 627, 1099, 1237
BanII	GRGCYC	3 cut(s)	194, 226, 1491
BbsI	GAAGAC	2 cut(s)	39, 1299
Bbv12I	GWGCWC	3 cut(s)	194, 1459, 1574
BbvI	GCAGC	3 cut(s)	443, 1035, 1567
BccI	CCATC	2 cut(s)	347, 808
BciT130I	CCWGG	3 cut(s)	781, 970, 1527
BcnI	CCSGG	2 cut(s)	90, 1384
BcoDI	GTCTC	1 cut(s)	228
BfaI	CTAG	7 cut(s)	345, 1059, 1301, 1341, 1371, 1422, 1631
BfmI	CTRYAG	1 cut(s)	1492
BfuAI	ACCTGC	2 cut(s)	1043, 1468
BisI	GCNGC	3 cut(s)	432, 1024, 1581
BlsI	GCNGC	3 cut(s)	433, 1025, 1582
Bme1390I	CCNGG	5 cut(s)	90, 781, 970, 1384, 1527
Bme18I	GGWCC	4 cut(s)	86, 627, 1099, 1237
BmgT120I	GGNCC	5 cut(s)	86, 92, 627, 1099, 1237
BmiI	GGNNCC	6 cut(s)	9, 88, 1084, 1239, 1606, 1645
BmrFI	CCNGG	5 cut(s)	90, 781, 970, 1384, 1527
BmrI	ACTGGG	1 cut(s)	542
BmuI	ACTGGG	1 cut(s)	542
BpiI	GAAGAC	2 cut(s)	39, 1299
BpmI	CTGGAG	2 cut(s)	330, 947
Bpu10I	CCTNAGC	1 cut(s)	1182
Bpu14I	TTCGAA	1 cut(s)	787
BpuEI	CTTGAG	1 cut(s)	1259
BpuMI	CCSGG	2 cut(s)	90, 1384
Bsa29I	ATCGAT	1 cut(s)	497
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	3 cut(s)	780, 912, 1526
BsaWI	WCCGGW	3 cut(s)	83, 230, 251
BsaXI	ACNNNNNCTCC	2 cut(s)	233, 263
Bse118I	RCCGGY	1 cut(s)	1583
Bse1I	ACTGG	7 cut(s)	148, 537, 703, 930, 1068, 1354, 1608
BseAI	TCCGGA	2 cut(s)	230, 251
BseBI	CCWGG	3 cut(s)	781, 970, 1527
BseCI	ATCGAT	1 cut(s)	497
BseDI	CCNNGG	3 cut(s)	780, 912, 1526
BseGI	GGATG	3 cut(s)	15, 1072, 1687
BseMII	CTCAG	2 cut(s)	498, 1497
BseNI	ACTGG	7 cut(s)	148, 537, 703, 930, 1068, 1354, 1608
BseRI	GAGGAG	2 cut(s)	1649, 1682
BseXI	GCAGC	3 cut(s)	443, 1035, 1567
BsgI	GTGCAG	1 cut(s)	997
Bsh1236I	CGCG	2 cut(s)	1113, 1174
BshFI	GGCC	1 cut(s)	93
BshVI	ATCGAT	1 cut(s)	497
BsiHKAI	GWGCWC	3 cut(s)	194, 1459, 1574
BsiSI	CCGG	6 cut(s)	84, 90, 231, 252, 1383, 1584
BsmAI	GTCTC	1 cut(s)	228
BsnI	GGCC	1 cut(s)	93
Bso31I	GGTCTC	1 cut(s)	228
Bsp119I	TTCGAA	1 cut(s)	787
Bsp1286I	GDGCHC	5 cut(s)	194, 226, 1459, 1491, 1574
Bsp13I	TCCGGA	2 cut(s)	230, 251
Bsp1407I	TGTACA	1 cut(s)	843
Bsp143I	GATC	4 cut(s)	614, 699, 1409, 1690
BspACI	CCGC	7 cut(s)	44, 156, 303, 1102, 1111, 1172, 1679
BspANI	GGCC	1 cut(s)	93
BspCNI	CTCAG	2 cut(s)	499, 1496
BspDI	ATCGAT	1 cut(s)	497
BspEI	TCCGGA	2 cut(s)	230, 251
BspFNI	CGCG	2 cut(s)	1113, 1174
BspHI	TCATGA	2 cut(s)	822, 1255
BspLI	GGNNCC	6 cut(s)	9, 88, 1084, 1239, 1606, 1645
BspMI	ACCTGC	2 cut(s)	1043, 1468
BspPI	GGATC	3 cut(s)	694, 1417, 1698
BspT104I	TTCGAA	1 cut(s)	787
BspTNI	GGTCTC	1 cut(s)	228
BsrFI	RCCGGY	1 cut(s)	1583
BsrGI	TGTACA	1 cut(s)	843
BsrI	ACTGG	7 cut(s)	148, 537, 703, 930, 1068, 1354, 1608
BssAI	RCCGGY	1 cut(s)	1583
BssECI	CCNNGG	3 cut(s)	780, 912, 1526
BssMI	GATC	4 cut(s)	614, 699, 1409, 1690
BssT1I	CCWWGG	1 cut(s)	912
Bst2UI	CCWGG	3 cut(s)	781, 970, 1527
Bst4CI	ACNGT	4 cut(s)	112, 590, 637, 811
Bst6I	CTCTTC	2 cut(s)	62, 768
BstAUI	TGTACA	1 cut(s)	843
BstBI	TTCGAA	1 cut(s)	787
BstDEI	CTNAG	4 cut(s)	507, 1182, 1483, 1545
BstF5I	GGATG	3 cut(s)	15, 1072, 1687
BstFNI	CGCG	2 cut(s)	1113, 1174
BstKTI	GATC	4 cut(s)	617, 702, 1412, 1693
BstMAI	GTCTC	1 cut(s)	228
BstMBI	GATC	4 cut(s)	614, 699, 1409, 1690
BstMWI	GCNNNNNNNGC	5 cut(s)	354, 422, 431, 1110, 1151
BstNI	CCWGG	3 cut(s)	781, 970, 1527
BstNSI	RCATGY	3 cut(s)	405, 1007, 1023
BstSCI	CCNGG	5 cut(s)	88, 779, 968, 1382, 1525
BstSFI	CTRYAG	1 cut(s)	1492
BstUI	CGCG	2 cut(s)	1113, 1174
BstV1I	GCAGC	3 cut(s)	443, 1035, 1567
BstV2I	GAAGAC	2 cut(s)	39, 1299
BstX2I	RGATCY	3 cut(s)	699, 1409, 1690
BstYI	RGATCY	3 cut(s)	699, 1409, 1690
Bsu15I	ATCGAT	1 cut(s)	497
BsuRI	GGCC	1 cut(s)	93
BsuTUI	ATCGAT	1 cut(s)	497
BtgZI	GCGATG	1 cut(s)	854
BtsCI	GGATG	3 cut(s)	15, 1072, 1687
BtsI	GCAGTG	1 cut(s)	980
BtsIMutI	CAGTG	2 cut(s)	980, 1615
BveI	ACCTGC	2 cut(s)	1043, 1468
CaiI	CAGNNNCTG	2 cut(s)	1580, 1693
CciI	TCATGA	2 cut(s)	822, 1255
Cfr10I	RCCGGY	1 cut(s)	1583
Cfr13I	GGNCC	5 cut(s)	86, 92, 627, 1099, 1237
ClaI	ATCGAT	1 cut(s)	497
Csp6I	GTAC	6 cut(s)	844, 871, 962, 1166, 1201, 1446
CviQI	GTAC	6 cut(s)	844, 871, 962, 1166, 1201, 1446
DdeI	CTNAG	4 cut(s)	507, 1182, 1483, 1545
DpnI	GATC	4 cut(s)	616, 701, 1411, 1692
DpnII	GATC	4 cut(s)	614, 699, 1409, 1690
DraIII	CACNNNGTG	1 cut(s)	1304
Eam1104I	CTCTTC	2 cut(s)	62, 768
EarI	CTCTTC	2 cut(s)	62, 768
EciI	GGCGGA	2 cut(s)	33, 1694
Ecl136II	GAGCTC	1 cut(s)	192
Eco130I	CCWWGG	1 cut(s)	912
Eco24I	GRGCYC	3 cut(s)	194, 226, 1491
Eco31I	GGTCTC	1 cut(s)	228
Eco47I	GGWCC	4 cut(s)	86, 627, 1099, 1237
Eco53kI	GAGCTC	1 cut(s)	192
Eco57I	CTGAAG	2 cut(s)	447, 708
EcoICRI	GAGCTC	1 cut(s)	192
EcoRII	CCWGG	3 cut(s)	779, 968, 1525
EcoT14I	CCWWGG	1 cut(s)	912
EcoT38I	GRGCYC	3 cut(s)	194, 226, 1491
ErhI	CCWWGG	1 cut(s)	912
FalI	AAGNNNNNCTT	2 cut(s)	1115, 1147
FblI	GTMKAC	1 cut(s)	1358
Fnu4HI	GCNGC	3 cut(s)	432, 1024, 1581
FokI	GGATG	3 cut(s)	2, 1079, 1694
FriOI	GRGCYC	3 cut(s)	194, 226, 1491
Fsp4HI	GCNGC	3 cut(s)	432, 1024, 1581
FspBI	CTAG	7 cut(s)	345, 1059, 1301, 1341, 1371, 1422, 1631
GluI	GCNGC	3 cut(s)	432, 1024, 1581
GsuI	CTGGAG	2 cut(s)	330, 947
HaeIII	GGCC	1 cut(s)	93
HapII	CCGG	6 cut(s)	84, 90, 231, 252, 1383, 1584
HincII	GTYRAC	2 cut(s)	1032, 1056
HindII	GTYRAC	2 cut(s)	1032, 1056
HindIII	AAGCTT	2 cut(s)	677, 1391
HinfI	GANTC	7 cut(s)	182, 278, 293, 335, 758, 1295, 1627
HpaI	GTTAAC	1 cut(s)	1056
HpaII	CCGG	6 cut(s)	84, 90, 231, 252, 1383, 1584
HphI	GGTGA	5 cut(s)	130, 1319, 1334, 1531, 1577
Hpy166II	GTNNAC	7 cut(s)	153, 942, 1032, 1056, 1231, 1359, 1446
Hpy188I	TCNGA	8 cut(s)	7, 25, 196, 283, 298, 420, 1161, 1414
Hpy8I	GTNNAC	7 cut(s)	153, 942, 1032, 1056, 1231, 1359, 1446
Hpy99I	CGWCG	3 cut(s)	29, 128, 131
HpyAV	CCTTC	5 cut(s)	319, 683, 1090, 1156, 1696
HpyCH4III	ACNGT	4 cut(s)	112, 590, 637, 811
HpyCH4V	TGCA	6 cut(s)	216, 935, 978, 1023, 1038, 1463
HpyF10VI	GCNNNNNNNGC	5 cut(s)	354, 422, 431, 1110, 1151
HpyF3I	CTNAG	4 cut(s)	507, 1182, 1483, 1545
Kpn2I	TCCGGA	2 cut(s)	230, 251
KspAI	GTTAAC	1 cut(s)	1056
Kzo9I	GATC	4 cut(s)	614, 699, 1409, 1690
LmnI	GCTCC	3 cut(s)	7, 197, 1592
Lsp1109I	GCAGC	3 cut(s)	443, 1035, 1567
MaeI	CTAG	7 cut(s)	345, 1059, 1301, 1341, 1371, 1422, 1631
MaeIII	GTNAC	4 cut(s)	391, 740, 1307, 1695
MalI	GATC	4 cut(s)	616, 701, 1411, 1692
MboI	GATC	4 cut(s)	614, 699, 1409, 1690
MboII	GAAGA	7 cut(s)	41, 44, 49, 743, 755, 1207, 1304
MfeI	CAATTG	2 cut(s)	606, 618
MflI	RGATCY	3 cut(s)	699, 1409, 1690
MhlI	GDGCHC	5 cut(s)	194, 226, 1459, 1491, 1574
MlyI	GAGTC	3 cut(s)	287, 1289, 1621
MmeI	TCCRAC	3 cut(s)	48, 219, 1570
MroI	TCCGGA	2 cut(s)	230, 251
MseI	TTAA	7 cut(s)	258, 491, 849, 1055, 1121, 1139, 1500
MspI	CCGG	6 cut(s)	84, 90, 231, 252, 1383, 1584
MspR9I	CCNGG	5 cut(s)	90, 781, 970, 1384, 1527
MunI	CAATTG	2 cut(s)	606, 618
MvaI	CCWGG	3 cut(s)	781, 970, 1527
MvnI	CGCG	2 cut(s)	1113, 1174
MwoI	GCNNNNNNNGC	5 cut(s)	354, 422, 431, 1110, 1151
NciI	CCSGG	2 cut(s)	90, 1384
NdeII	GATC	4 cut(s)	614, 699, 1409, 1690
NlaIV	GGNNCC	6 cut(s)	9, 88, 1084, 1239, 1606, 1645
NmeAIII	GCCGAG	1 cut(s)	213
NmuCI	GTSAC	2 cut(s)	1307, 1695
NspI	RCATGY	3 cut(s)	405, 1007, 1023
NspV	TTCGAA	1 cut(s)	787
PagI	TCATGA	2 cut(s)	822, 1255
PaqCI	CACCTGC	1 cut(s)	1468
PciI	ACATGT	2 cut(s)	401, 1003
PfeI	GAWTC	4 cut(s)	182, 278, 335, 758
PkrI	GCNGC	3 cut(s)	433, 1025, 1582
PleI	GAGTC	3 cut(s)	287, 1289, 1621
PpsI	GAGTC	3 cut(s)	287, 1289, 1621
PscI	ACATGT	2 cut(s)	401, 1003
PshBI	ATTAAT	2 cut(s)	258, 849
Psp124BI	GAGCTC	1 cut(s)	194
Psp6I	CCWGG	3 cut(s)	779, 968, 1525
PspGI	CCWGG	3 cut(s)	779, 968, 1525
PspN4I	GGNNCC	6 cut(s)	9, 88, 1084, 1239, 1606, 1645
PspPI	GGNCC	5 cut(s)	86, 92, 627, 1099, 1237
PstNI	CAGNNNCTG	2 cut(s)	1580, 1693
PsuI	RGATCY	3 cut(s)	699, 1409, 1690
RsaI	GTAC	6 cut(s)	845, 872, 963, 1167, 1202, 1447
RsaNI	GTAC	6 cut(s)	844, 871, 962, 1166, 1201, 1446
SacI	GAGCTC	1 cut(s)	194
SaqAI	TTAA	7 cut(s)	258, 491, 849, 1055, 1121, 1139, 1500
SatI	GCNGC	3 cut(s)	432, 1024, 1581
Sau3AI	GATC	4 cut(s)	614, 699, 1409, 1690
Sau96I	GGNCC	5 cut(s)	86, 92, 627, 1099, 1237
SchI	GAGTC	3 cut(s)	287, 1289, 1621
ScrFI	CCNGG	5 cut(s)	90, 781, 970, 1384, 1527
SduI	GDGCHC	5 cut(s)	194, 226, 1459, 1491, 1574
SfcI	CTRYAG	1 cut(s)	1492
SfuI	TTCGAA	1 cut(s)	787
SinI	GGWCC	4 cut(s)	86, 627, 1099, 1237
SmlI	CTYRAG	1 cut(s)	1274
SmoI	CTYRAG	1 cut(s)	1274
SsiI	CCGC	7 cut(s)	44, 156, 303, 1102, 1111, 1172, 1679
SspI	AATATT	2 cut(s)	889, 1366
SspMI	CTAG	7 cut(s)	345, 1059, 1301, 1341, 1371, 1422, 1631
SstI	GAGCTC	1 cut(s)	194
StyD4I	CCNGG	5 cut(s)	88, 779, 968, 1382, 1525
StyI	CCWWGG	1 cut(s)	912
TaaI	ACNGT	4 cut(s)	112, 590, 637, 811
TaqI	TCGA	4 cut(s)	123, 201, 497, 787
TatI	WGTACW	3 cut(s)	843, 961, 1445
TfiI	GAWTC	4 cut(s)	182, 278, 335, 758
Tru1I	TTAA	7 cut(s)	258, 491, 849, 1055, 1121, 1139, 1500
Tru9I	TTAA	7 cut(s)	258, 491, 849, 1055, 1121, 1139, 1500
TscAI	CASTG	2 cut(s)	980, 1615
TseFI	GTSAC	2 cut(s)	1307, 1695
TseI	GCWGC	3 cut(s)	431, 1023, 1580
Tsp45I	GTSAC	2 cut(s)	1307, 1695
TspDTI	ATGAA	7 cut(s)	348, 455, 839, 1226, 1244, 1272, 1698
TspGWI	ACGGA	2 cut(s)	55, 910
TspRI	CASTG	2 cut(s)	980, 1615
VpaK11BI	GGWCC	4 cut(s)	86, 627, 1099, 1237
VspI	ATTAAT	2 cut(s)	258, 849
XapI	RAATTY	6 cut(s)	482, 550, 734, 1040, 1265, 1417
XbaI	TCTAGA	2 cut(s)	1421, 1630
XceI	RCATGY	3 cut(s)	405, 1007, 1023
XcmI	CCANNNNNNNNNTGG	1 cut(s)	887
XmiI	GTMKAC	1 cut(s)	1358
XspI	CTAG	7 cut(s)	345, 1059, 1301, 1341, 1371, 1422, 1631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.