Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001715

Physical Location & Seq

Genomic Coordinates Forward (+)

35273140 .. 35281872

Gene Structure 8733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG297000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGTCAGAGCCAATCATCCTCTCAGACGAAGAAGACCACCACAATGCCTCATTCCCCCCATTTCCCTCTAAGAAACGCCGAACCCAATTCGACCCGAGTCCGAATCCGAATCCAAATCCTACGGTTCTCATCCTCGACGACGACCCGACCCCGCAGAAACCCGTCCCCAAATCCACGGCCTACTTGGTCCCGGACACCCCGAATTCCGATATCGCAATCGTGAAATGCACAAGGGCTGCCCAGCACAAGTTATCTGGCATCAATGGATTGATATGTTTGGAATCGGATAATGAGCCCGGAAGTAGTTGTGGAGGGGAAAAGAAGAAGGCAAATGGATCAATGCTGGGTGGTTTTGGTCTGGCCAAGGTCTTGGATTGGAGTCCGAGTTTTTTTGAGTCCTCATCTGCACTTGATTCATGTTTTGGAACAGGACATTCTGAGCTGGCGCGCACGCTTGAGGGCAGCTCTTCAAATCCTACTTCTTTGCAGGATGATATTGCCCAGGTACTTGATTGTCCTGACGATGAAAACATAATGGATCAAATGGGCAACATTATGAGACCAAGAAAAGAATCTATAGCTATTACGGAAAAGGAAAATATTACAAAAGAAGTAGAGGGAAAAAAGAAGATGACCAAAGAGGAAAGGACACGCTTGATGGAAGAAAAGAAGCTAAAGAAGCTTGAAGAGAAGTTGCAAAGAGAAGCTCTGAAAGCTGAAGCTGCAGAGATGAAAAAATTACAGAAAGAAAAGCTAAGGTGGGAAAAAGGGAAGTTTGCACTTAAATCCATCGTGGCTGAGATTGATTCTAAAGTAATTGAATCCGGATCAATTGGAGGAAGTCTGCTTACAAGGTTTGCCGAAAGGGGGTTAGCATACCGTATAACATCAAATCCAATTGAAAGATCAATTGTCTGGACCATGACTGTTCCAGAACATATTTCACAGCTTTCTCCTGGAGGAGTGGAGATTCAATATATATTGATTGTTTATGAGGCTGAAGATTTTTGTAAACTCATCATCAACGAATCTCTTCCGGGACTTGTCTTGAGAGTTCAAAATCATTATCCATCATATACAGTGTGTTACCTCACAAATAAGTTGATTGCATATGTTAGGAAAAGGGAAGGACAATTGTACAATGGCCGGGGCCGTGAGGGACACCCTAGTGTTGACAAGGTTGAAAAGGTGTTGGCAAATTTGACCACTAGCTTTTCCAAAGTACATTCCAGGCAGTGCAAAGATGAGGCTGAACTTGCTGAACATGTTGTTGGTTTAACATGTAGCCTGTCATCCTGCCTTTTCAGGAAGAAGTTAACTAGACTTGATGTAAATGCTAATGGATCCTTTATCACGAAGGACTGCATTGACCGGCATTTGATAAAAAAGAGCTCATGGTTAAAGGCTTTGGTAGCTATCCCGAAGGTGCAGCCACGATTTGCTATTGCCATAGGCAAGAAGTATCCTACCTTGAAGTCTCTGTTGAGTGTTTACATGGACCCAAATATATCAGTACATGAAAAGGAATTTCTGCTCAAGGACTTGACAACAGAAGGTTTACTCGGTGGTGATAGAAGATTAGGTGAGGTGTGTTCCAAGAGAGTGTACAGAATACTCATGGCACAAAGTGGCTGCACCAAGACCGATGATGTTGAGGATGGTGCAGATTTTTTCAGGGTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009987 GO:0010212 GO:0010332 GO:0016787 GO:0016788 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

ERCC4

Protein Analysis

561

Amino Acids

62.52

Weight (kDa)

8.26

Isoelectric Point (pI)

44.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	268 - 424	2.3e-13	ERCC4 domain
EME1-MUS81_C	PF21292	466 - 536	8.9e-08	EME1/MUS81, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21800 AT2G21800 AT2G21800 AT2G22140 AT2G22140
fragaria_vesca	FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_5g31350 FvH4_5g31350
malus_domestica	MD15G1335700.v1.1 MD15G1404100.v1.1
prunus_persica	Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.6G166800_v2.0.a1
pyrus_communis	pycom15g28970
rosa_chinensis	RchiOBHm_Chr2g0117911 RchiOBHm_Chr7g0226601 RchiOBHm_Chr7g0226611 RchiOBHm_Chr7g0228631
rosa_laevigata	RLG00000001714 RLG00000018383
rosa_multiflora	Rmu_sc0001423.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126110 Rroxscaffold_3G00230990 Rroxscaffold_3G00232670
rosa_rugosa	Rorug02G0214800 Rorug02G0214900 Rorug02G0214900 Rorug07G0238500 Rorug07G0238600
rosa_samantha	Rh2AG271200 Rh2BG282800 Rh2DG279100 Rh2DG297000 Rh7AG386100 Rh7AG403200 Rh7BG372700 Rh7BG372800 Rh7CG405400 Rh7CG422500 Rh7DG384700
rosa_wichuraiana	Rw2G021450 Rw7G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	448
AccIII	TCCGGA	1 cut(s)	824
AciI	CCGC	1 cut(s)	152
AclWI	GGATC	5 cut(s)	343, 546, 835, 1338, 1351
AcoI	YGGCCR	2 cut(s)	360, 1144
AcsI	RAATTY	3 cut(s)	202, 1198, 1526
AcuI	CTGAAG	2 cut(s)	738, 1020
AdeI	CACNNNGTG	1 cut(s)	1628
AfaI	GTAC	5 cut(s)	507, 1139, 1224, 1515, 1607
AfiI	CCNNNNNNNGG	1 cut(s)	867
AflIII	ACRYGT	2 cut(s)	1264, 1280
AgsI	TTSAA	8 cut(s)	471, 686, 821, 902, 974, 1058, 1184, 1474
AjnI	CCWGG	3 cut(s)	501, 955, 1229
AjuI	GAANNNNNNNTTGG	2 cut(s)	1254, 1286
AleI	CACNNNNGTG	1 cut(s)	1167
Alw21I	GWGCWC	1 cut(s)	1394
Alw26I	GTCTC	2 cut(s)	553, 1482
AlwI	GGATC	5 cut(s)	343, 546, 835, 1338, 1351
Ama87I	CYCGRG	1 cut(s)	94
Aor13HI	TCCGGA	1 cut(s)	824
AoxI	GGCC	4 cut(s)	177, 360, 1144, 1150
ApeKI	GCWGC	5 cut(s)	236, 462, 722, 1429, 1632
ApoI	RAATTY	3 cut(s)	202, 1198, 1526
Asp700I	GAANNNNTTC	1 cut(s)	1032
AspLEI	GCGC	2 cut(s)	448, 450
AspS9I	GGNCC	4 cut(s)	187, 918, 1150, 1498
AsuC2I	CCSGG	4 cut(s)	191, 297, 1038, 1148
AsuHPI	GGTGA	2 cut(s)	1580, 1595
AvaI	CYCGRG	1 cut(s)	94
AvaII	GGWCC	3 cut(s)	187, 918, 1498
BalI	TGGCCA	1 cut(s)	362
BamHI	GGATCC	1 cut(s)	1343
BanII	GRGCYC	2 cut(s)	297, 1394
BarI	GAAGNNNNNNTAC	2 cut(s)	832, 864
BbsI	GAAGAC	1 cut(s)	39
Bbv12I	GWGCWC	1 cut(s)	1394
BbvI	GCAGC	5 cut(s)	223, 474, 709, 1441, 1619
BccI	CCATC	4 cut(s)	652, 797, 1078, 1652
BceAI	ACGGC	2 cut(s)	192, 1137
BciT130I	CCWGG	3 cut(s)	503, 957, 1231
BciVI	GTATCC	1 cut(s)	1473
BcnI	CCSGG	4 cut(s)	191, 297, 1038, 1148
BcoDI	GTCTC	2 cut(s)	553, 1482
BfaI	CTAG	3 cut(s)	1167, 1209, 1320
BfmI	CTRYAG	2 cut(s)	576, 723
BfuI	GTATCC	1 cut(s)	1473
BisI	GCNGC	5 cut(s)	237, 463, 723, 1430, 1633
BlsI	GCNGC	5 cut(s)	238, 464, 724, 1431, 1634
Bme1390I	CCNGG	7 cut(s)	191, 297, 503, 957, 1038, 1148, 1231
Bme18I	GGWCC	3 cut(s)	187, 918, 1498
BmeT110I	CYCGRG	1 cut(s)	94
BmgT120I	GGNCC	4 cut(s)	187, 918, 1150, 1498
BmiI	GGNNCC	4 cut(s)	189, 1151, 1345, 1500
BmrFI	CCNGG	7 cut(s)	191, 297, 503, 957, 1038, 1148, 1231
BmsI	GCATC	1 cut(s)	267
BoxI	GACNNNNGTC	1 cut(s)	96
BpiI	GAAGAC	1 cut(s)	39
BplI	GAGNNNNNCTC	2 cut(s)	449, 481
BpmI	CTGGAG	1 cut(s)	978
Bpu10I	CCTNAGC	1 cut(s)	755
BpuEI	CTTGAG	3 cut(s)	476, 1069, 1520
BpuMI	CCSGG	4 cut(s)	191, 297, 1038, 1148
BsaI	GGTCTC	1 cut(s)	553
BsaJI	CCNNGG	4 cut(s)	174, 363, 501, 1147
BsaWI	WCCGGW	1 cut(s)	824
BsaXI	ACNNNNNCTCC	2 cut(s)	370, 400
Bsc4I	CCNNNNNNNGG	1 cut(s)	867
Bse118I	RCCGGY	1 cut(s)	1371
BseAI	TCCGGA	1 cut(s)	824
BseBI	CCWGG	3 cut(s)	503, 957, 1231
BseDI	CCNNGG	4 cut(s)	174, 363, 501, 1147
BseGI	GGATG	5 cut(s)	15, 129, 496, 1292, 1663
BseLI	CCNNNNNNNGG	1 cut(s)	867
BseMII	CTCAG	3 cut(s)	36, 429, 789
BsePI	GCGCGC	1 cut(s)	446
BseRI	GAGGAG	1 cut(s)	975
BseXI	GCAGC	5 cut(s)	223, 474, 709, 1441, 1619
BseYI	CCCAGC	2 cut(s)	240, 343
BsgI	GTGCAG	4 cut(s)	390, 1448, 1618, 1683
Bsh1236I	CGCG	1 cut(s)	448
BshFI	GGCC	4 cut(s)	179, 362, 1146, 1152
BsiHKAI	GWGCWC	1 cut(s)	1394
BsiHKCI	CYCGRG	1 cut(s)	94
BsiSI	CCGG	6 cut(s)	191, 297, 825, 1037, 1147, 1372
BslFI	GGGAC	4 cut(s)	149, 173, 1053, 1173
BslI	CCNNNNNNNGG	1 cut(s)	867
BsmAI	GTCTC	2 cut(s)	553, 1482
BsmFI	GGGAC	4 cut(s)	149, 173, 1053, 1173
BsnI	GGCC	4 cut(s)	179, 362, 1146, 1152
Bso31I	GGTCTC	1 cut(s)	553
BsoBI	CYCGRG	1 cut(s)	94
Bsp1286I	GDGCHC	2 cut(s)	297, 1394
Bsp13I	TCCGGA	1 cut(s)	824
Bsp1407I	TGTACA	2 cut(s)	1137, 1605
Bsp143I	GATC	5 cut(s)	335, 538, 827, 905, 1343
BspACI	CCGC	1 cut(s)	152
BspANI	GGCC	4 cut(s)	179, 362, 1146, 1152
BspCNI	CTCAG	3 cut(s)	35, 430, 790
BspEI	TCCGGA	1 cut(s)	824
BspFNI	CGCG	1 cut(s)	448
BspLI	GGNNCC	4 cut(s)	189, 1151, 1345, 1500
BspMAI	CTGCAG	1 cut(s)	727
BspPI	GGATC	5 cut(s)	343, 546, 835, 1338, 1351
BspQI	GCTCTTC	1 cut(s)	472
BspTNI	GGTCTC	1 cut(s)	553
BsrFI	RCCGGY	1 cut(s)	1371
BsrGI	TGTACA	2 cut(s)	1137, 1605
BssAI	RCCGGY	1 cut(s)	1371
BssECI	CCNNGG	4 cut(s)	174, 363, 501, 1147
BssHII	GCGCGC	1 cut(s)	446
BssMI	GATC	5 cut(s)	335, 538, 827, 905, 1343
BssT1I	CCWWGG	1 cut(s)	363
Bst2UI	CCWGG	3 cut(s)	503, 957, 1231
Bst4CI	ACNGT	4 cut(s)	124, 881, 928, 1081
Bst6I	CTCTTC	3 cut(s)	472, 681, 1038
BstAUI	TGTACA	2 cut(s)	1137, 1605
BstC8I	GCNNGC	3 cut(s)	444, 448, 452
BstDEI	CTNAG	5 cut(s)	22, 69, 438, 755, 798
BstDSI	CCRYGG	1 cut(s)	174
BstF5I	GGATG	5 cut(s)	15, 129, 496, 1292, 1663
BstFNI	CGCG	1 cut(s)	448
BstHHI	GCGC	2 cut(s)	448, 450
BstKTI	GATC	5 cut(s)	338, 541, 830, 908, 1346
BstMAI	GTCTC	2 cut(s)	553, 1482
BstMBI	GATC	5 cut(s)	335, 538, 827, 905, 1343
BstMWI	GCNNNNNNNGC	5 cut(s)	679, 713, 722, 1256, 1412
BstNI	CCWGG	3 cut(s)	503, 957, 1231
BstNSI	RCATGY	2 cut(s)	1268, 1284
BstPAI	GACNNNNGTC	1 cut(s)	96
BstSCI	CCNGG	7 cut(s)	189, 295, 501, 955, 1036, 1146, 1229
BstSFI	CTRYAG	2 cut(s)	576, 723
BstUI	CGCG	1 cut(s)	448
BstV1I	GCAGC	5 cut(s)	223, 474, 709, 1441, 1619
BstV2I	GAAGAC	1 cut(s)	39
BstX2I	RGATCY	1 cut(s)	1343
BstXI	CCANNNNNNTGG	1 cut(s)	370
BstYI	RGATCY	1 cut(s)	1343
BsuI	GTATCC	1 cut(s)	1473
BsuRI	GGCC	4 cut(s)	179, 362, 1146, 1152
BtgI	CCRYGG	1 cut(s)	174
BtsCI	GGATG	5 cut(s)	15, 129, 496, 1292, 1663
BtsI	GCAGTG	1 cut(s)	1241
BtsIMutI	CAGTG	2 cut(s)	1086, 1241
Cac8I	GCNNGC	3 cut(s)	444, 448, 452
CfoI	GCGC	2 cut(s)	448, 450
Cfr10I	RCCGGY	1 cut(s)	1371
Cfr13I	GGNCC	4 cut(s)	187, 918, 1150, 1498
Csp6I	GTAC	5 cut(s)	506, 1138, 1223, 1514, 1606
CviAII	CATG	8 cut(s)	417, 922, 1265, 1281, 1395, 1495, 1517, 1618
CviQI	GTAC	5 cut(s)	506, 1138, 1223, 1514, 1606
DdeI	CTNAG	5 cut(s)	22, 69, 438, 755, 798
DpnI	GATC	5 cut(s)	337, 540, 829, 907, 1345
DpnII	GATC	5 cut(s)	335, 538, 827, 905, 1343
DraIII	CACNNNGTG	1 cut(s)	1628
EaeI	YGGCCR	2 cut(s)	360, 1144
Eam1104I	CTCTTC	3 cut(s)	472, 681, 1038
EarI	CTCTTC	3 cut(s)	472, 681, 1038
Ecl136II	GAGCTC	1 cut(s)	1392
Eco130I	CCWWGG	1 cut(s)	363
Eco24I	GRGCYC	2 cut(s)	297, 1394
Eco31I	GGTCTC	1 cut(s)	553
Eco32I	GATATC	1 cut(s)	211
Eco47I	GGWCC	3 cut(s)	187, 918, 1498
Eco53kI	GAGCTC	1 cut(s)	1392
Eco57I	CTGAAG	2 cut(s)	738, 1020
Eco88I	CYCGRG	1 cut(s)	94
EcoICRI	GAGCTC	1 cut(s)	1392
EcoRI	GAATTC	1 cut(s)	202
EcoRII	CCWGG	3 cut(s)	501, 955, 1229
EcoRV	GATATC	1 cut(s)	211
EcoT14I	CCWWGG	1 cut(s)	363
EcoT38I	GRGCYC	2 cut(s)	297, 1394
ErhI	CCWWGG	1 cut(s)	363
FaeI	CATG	8 cut(s)	420, 925, 1268, 1284, 1398, 1498, 1520, 1621
FaqI	GGGAC	4 cut(s)	149, 173, 1053, 1173
FatI	CATG	8 cut(s)	416, 921, 1264, 1280, 1394, 1494, 1516, 1617
FauI	CCCGC	1 cut(s)	159
FauNDI	CATATG	1 cut(s)	1111
Fnu4HI	GCNGC	5 cut(s)	237, 463, 723, 1430, 1633
FokI	GGATG	5 cut(s)	2, 116, 503, 1279, 1670
FriOI	GRGCYC	2 cut(s)	297, 1394
Fsp4HI	GCNGC	5 cut(s)	237, 463, 723, 1430, 1633
FspBI	CTAG	3 cut(s)	1167, 1209, 1320
GlaI	GCGC	2 cut(s)	447, 449
GluI	GCNGC	5 cut(s)	237, 463, 723, 1430, 1633
GsaI	CCCAGC	2 cut(s)	244, 347
GsuI	CTGGAG	1 cut(s)	978
HaeIII	GGCC	4 cut(s)	179, 362, 1146, 1152
HapII	CCGG	6 cut(s)	191, 297, 825, 1037, 1147, 1372
HhaI	GCGC	2 cut(s)	448, 450
Hin1II	CATG	8 cut(s)	420, 925, 1268, 1284, 1398, 1498, 1520, 1621
Hin6I	GCGC	2 cut(s)	446, 448
HinP1I	GCGC	2 cut(s)	446, 448
HincII	GTYRAC	2 cut(s)	1174, 1317
HindII	GTYRAC	2 cut(s)	1174, 1317
HindIII	AAGCTT	1 cut(s)	680
HpaI	GTTAAC	1 cut(s)	1317
HpaII	CCGG	6 cut(s)	191, 297, 825, 1037, 1147, 1372
HphI	GGTGA	2 cut(s)	1580, 1595
Hpy166II	GTNNAC	6 cut(s)	1013, 1174, 1317, 1492, 1559, 1606
Hpy188I	TCNGA	9 cut(s)	7, 25, 102, 108, 208, 286, 384, 439, 711
Hpy188III	TCNNGA	9 cut(s)	220, 518, 825, 916, 932, 1048, 1306, 1354, 1420
Hpy8I	GTNNAC	6 cut(s)	1013, 1174, 1317, 1492, 1559, 1606
Hpy99I	CGWCG	2 cut(s)	140, 143
HpyAV	CCTTC	5 cut(s)	319, 1121, 1351, 1417, 1547
HpyCH4III	ACNGT	4 cut(s)	124, 881, 928, 1081
HpyF10VI	GCNNNNNNNGC	5 cut(s)	679, 713, 722, 1256, 1412
HpyF3I	CTNAG	5 cut(s)	22, 69, 438, 755, 798
Hsp92II	CATG	8 cut(s)	420, 925, 1268, 1284, 1398, 1498, 1520, 1621
HspAI	GCGC	2 cut(s)	446, 448
Kpn2I	TCCGGA	1 cut(s)	824
KspAI	GTTAAC	1 cut(s)	1317
Kzo9I	GATC	5 cut(s)	335, 538, 827, 905, 1343
LguI	GCTCTTC	1 cut(s)	472
Lsp1109I	GCAGC	5 cut(s)	223, 474, 709, 1441, 1619
LweI	GCATC	1 cut(s)	267
MaeI	CTAG	3 cut(s)	1167, 1209, 1320
MaeIII	GTNAC	1 cut(s)	1085
MalI	GATC	5 cut(s)	337, 540, 829, 907, 1345
MboI	GATC	5 cut(s)	335, 538, 827, 905, 1343
MfeI	CAATTG	5 cut(s)	831, 897, 909, 1133, 1681
MflI	RGATCY	1 cut(s)	1343
MhlI	GDGCHC	2 cut(s)	297, 1394
MlsI	TGGCCA	1 cut(s)	362
MluNI	TGGCCA	1 cut(s)	362
MlyI	GAGTC	3 cut(s)	106, 388, 404
Mox20I	TGGCCA	1 cut(s)	362
MroI	TCCGGA	1 cut(s)	824
MroXI	GAANNNNTTC	1 cut(s)	1032
MscI	TGGCCA	1 cut(s)	362
MseI	TTAA	4 cut(s)	783, 1277, 1316, 1400
MslI	CAYNNNNRTG	2 cut(s)	42, 1167
Msp20I	TGGCCA	1 cut(s)	362
MspI	CCGG	6 cut(s)	191, 297, 825, 1037, 1147, 1372
MspR9I	CCNGG	7 cut(s)	191, 297, 503, 957, 1038, 1148, 1231
MunI	CAATTG	5 cut(s)	831, 897, 909, 1133, 1681
MvaI	CCWGG	3 cut(s)	503, 957, 1231
MvnI	CGCG	1 cut(s)	448
MwoI	GCNNNNNNNGC	5 cut(s)	679, 713, 722, 1256, 1412
NciI	CCSGG	4 cut(s)	191, 297, 1038, 1148
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	5 cut(s)	335, 538, 827, 905, 1343
NlaIII	CATG	8 cut(s)	420, 925, 1268, 1284, 1398, 1498, 1520, 1621
NlaIV	GGNNCC	4 cut(s)	189, 1151, 1345, 1500
NspI	RCATGY	2 cut(s)	1268, 1284
OliI	CACNNNNGTG	1 cut(s)	1167
PauI	GCGCGC	1 cut(s)	446
PciI	ACATGT	2 cut(s)	1264, 1280
PciSI	GCTCTTC	1 cut(s)	472
PdmI	GAANNNNTTC	1 cut(s)	1032
PfeI	GAWTC	9 cut(s)	103, 109, 281, 413, 572, 806, 821, 970, 1028
PfoI	TCCNGGA	3 cut(s)	189, 955, 1036
PkrI	GCNGC	5 cut(s)	238, 464, 724, 1431, 1634
PleI	GAGTC	3 cut(s)	105, 387, 403
PpsI	GAGTC	3 cut(s)	105, 387, 403
PscI	ACATGT	2 cut(s)	1264, 1280
PshAI	GACNNNNGTC	1 cut(s)	96
Psp124BI	GAGCTC	1 cut(s)	1394
Psp6I	CCWGG	3 cut(s)	501, 955, 1229
PspFI	CCCAGC	2 cut(s)	240, 343
PspGI	CCWGG	3 cut(s)	501, 955, 1229
PspN4I	GGNNCC	4 cut(s)	189, 1151, 1345, 1500
PspPI	GGNCC	4 cut(s)	187, 918, 1150, 1498
PstI	CTGCAG	1 cut(s)	727
PsuI	RGATCY	1 cut(s)	1343
PteI	GCGCGC	1 cut(s)	446
RsaI	GTAC	5 cut(s)	507, 1139, 1224, 1515, 1607
RsaNI	GTAC	5 cut(s)	506, 1138, 1223, 1514, 1606
RseI	CAYNNNNRTG	2 cut(s)	42, 1167
SacI	GAGCTC	1 cut(s)	1394
SapI	GCTCTTC	1 cut(s)	472
SaqAI	TTAA	4 cut(s)	783, 1277, 1316, 1400
SatI	GCNGC	5 cut(s)	237, 463, 723, 1430, 1633
Sau3AI	GATC	5 cut(s)	335, 538, 827, 905, 1343
Sau96I	GGNCC	4 cut(s)	187, 918, 1150, 1498
SchI	GAGTC	3 cut(s)	106, 388, 404
ScrFI	CCNGG	7 cut(s)	191, 297, 503, 957, 1038, 1148, 1231
SduI	GDGCHC	2 cut(s)	297, 1394
SfaNI	GCATC	1 cut(s)	267
SfcI	CTRYAG	2 cut(s)	576, 723
SinI	GGWCC	3 cut(s)	187, 918, 1498
SmiMI	CAYNNNNRTG	2 cut(s)	42, 1167
SmlI	CTYRAG	3 cut(s)	455, 1048, 1535
SmoI	CTYRAG	3 cut(s)	455, 1048, 1535
SsiI	CCGC	1 cut(s)	152
SspI	AATATT	1 cut(s)	601
SspMI	CTAG	3 cut(s)	1167, 1209, 1320
SstI	GAGCTC	1 cut(s)	1394
StyD4I	CCNGG	7 cut(s)	189, 295, 501, 955, 1036, 1146, 1229
StyI	CCWWGG	1 cut(s)	363
TaaI	ACNGT	4 cut(s)	124, 881, 928, 1081
TaqI	TCGA	2 cut(s)	90, 135
TaqII	GACCGA	1 cut(s)	1658
TatI	WGTACW	4 cut(s)	1137, 1222, 1513, 1605
TfiI	GAWTC	9 cut(s)	103, 109, 281, 413, 572, 806, 821, 970, 1028
Tru1I	TTAA	4 cut(s)	783, 1277, 1316, 1400
Tru9I	TTAA	4 cut(s)	783, 1277, 1316, 1400
TscAI	CASTG	2 cut(s)	1086, 1241
TseI	GCWGC	5 cut(s)	236, 462, 722, 1429, 1632
TspDTI	ATGAA	4 cut(s)	405, 540, 746, 1533
TspGWI	ACGGA	1 cut(s)	602
TspRI	CASTG	2 cut(s)	1086, 1241
VpaK11BI	GGWCC	3 cut(s)	187, 918, 1498
XapI	RAATTY	3 cut(s)	202, 1198, 1526
XceI	RCATGY	2 cut(s)	1268, 1284
XcmI	CCANNNNNNNNNTGG	1 cut(s)	181
XmnI	GAANNNNTTC	1 cut(s)	1032
XspI	CTAG	3 cut(s)	1167, 1209, 1320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.