Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001715

Physical Location & Seq

Genomic Coordinates Reverse (-)

52030949 .. 52039858

Gene Structure 8910 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG405400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGTTCCGGCCACAAGTCCTCTGCTAATCGATGTCCTTACAAAGCAGCAAGAGAAGATGCAAAGAGAAGCTTTGAAAGCTGAAGCAGCAGATATGAAAAAGATACAGAAAGAAAAGCAAAGGTGGGAGAAAGGGAAATTTGCCTTAAAATCGATTGTGGCTGAGATTGATTGTAAAGTTGTGGAACTGGGGTCATTAGGAGGAAATTTGCTTACAAGGTTTGCTGAAAGAGGGCTATCATACCGTATAAAAGCAAATCCAATTGAAAGATCAATTGTCTGGACCATGACAATTCCAGAACACTTTTCACAGCTTTTTCCTGAAGGAATAGAGATCCAGTATATATTGCTTGTGTATGAGGCAGAAGAATTTTGTAACCTTGTCATCAAGGATTCACTTCTGGAACATATTGCCAGGGTTCGAAGTATTTATCCGTCTTATACAGTTTGTTATCTCATGAATAGGTCTATGGCGATGTATATTAATAATAGGGAACAAGAAGCGTACAAGAACCAAACAAATATTGGACGGACAAACCCAACTGCCAAGGAGGTTGAACTGGTGTTTGCAAAGTTTACCACCAATTTTTTCAAAGTACATTCCAGGCAGTGCAGAGATGAGGTTGAACTTGCTGAACATGTTGTTGGTTTGACATGCAGCCTGTCAACCTGCAAATTTAGAAAGAAGTTAACTAGACTGGATGTAAATGCTAATGGAGCCCTAATCACGAAGGACCGCATTGACCGCGATTTATTAAAGAACAACTTATGGTTAAGAGCTTTGGTAGCTATTCCGAAGGTACAACCGCGATTTGCTAAGGCTATATGGAAGAAGTACCCTACCATGAAATCTCTTTTGAGTGTTTACATGGACCCGATAATATCAGTTCATGAAAAGGAATTTCTGCTCAAGGATTTGACAACAGAAGGCTTACTAGGTGGTGACAGAAAAGTAGGTGAGGTAGGTATCATGGCTAGGGTTTTCGTCCAGTCTACTAATATTCCTAGTGTGGTTGCCGGGCGAAAGCTTGGTCAATTTAAAGGATCTGAAAATTCTAGAAAGGCAACAAAGATGATGTGTACTTTACGAGCACCTGCATTGAGATTGAGCAGTTTCTCAGGACTCCGTAGTGTTAATGCTTTAGATATTATGGTGAAGCCTGGGCAAGACTTATATTCTAAGGTGGGAGAAGCTATCTCCTCCCGGCATCGTAAGGCTAGCAGATGTGTGCCTAAAGCCACGTCGTTTGAGCGCTTCTCAGAAAAGGCAATAAACGCGATTATGCTTGCACAAGAGGAAACAAGGCGAATTGGTCACAACTTTGTTGGTACAGAGCACATACTTTTGGGTCTTGTTGGTGAAGGAACTGGAATTGCTGCCAAGGTCCTTAAATCTATGGGAATCAATCTTAAAGGGGCACGCGTTGAAGTGAAAAAGATCATTGGAACGGGTCGTGGCTTTGTTGCTATTGAAATCCCATTCACTTCTCGTGCAAAGCGAGTTTTGGAACTGTCACAGGAGGAAGCTCGACAACTGGGCCATAACTATATTGGACCTGAGCACTTGCTTTTGGGACTGCTTCGTGAAGGTGAGGGTGTGGCAGCTTGTGTTCTTAAAAATTTAGGTGCTGACTTCAGCAACATTCGCACACAGGCAAGCTACTGTCCTTGGGTTTATCTTTCTTTCAAGAGTAATTCGTCAAAAGGAAAAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009987 GO:0010212 GO:0010332 GO:0016787 GO:0016788 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

ERCC4

Protein Analysis

571

Amino Acids

64.09

Weight (kDa)

9.66

Isoelectric Point (pI)

33.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	64 - 215	2.3e-10	ERCC4 domain
EME1-MUS81_C	PF21292	256 - 319	1.3e-06	EME1/MUS81, C-terminal
Clp_N	PF02861	418 - 540	2.2e-34	Clp repeat (R) N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21800 AT2G21800 AT2G21800 AT2G22140 AT2G22140
fragaria_vesca	FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_5g31350 FvH4_5g31350
malus_domestica	MD15G1335700.v1.1 MD15G1404100.v1.1
prunus_persica	Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.6G166800_v2.0.a1
pyrus_communis	pycom15g28970
rosa_chinensis	RchiOBHm_Chr2g0117911 RchiOBHm_Chr7g0226601 RchiOBHm_Chr7g0226611 RchiOBHm_Chr7g0228631
rosa_laevigata	RLG00000001714 RLG00000018383
rosa_multiflora	Rmu_sc0001423.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126110 Rroxscaffold_3G00230990 Rroxscaffold_3G00232670
rosa_rugosa	Rorug02G0214800 Rorug02G0214900 Rorug02G0214900 Rorug07G0238500 Rorug07G0238600
rosa_samantha	Rh2AG271200 Rh2BG282800 Rh2DG279100 Rh2DG297000 Rh7AG386100 Rh7AG403200 Rh7BG372700 Rh7BG372800 Rh7CG405400 Rh7CG422500 Rh7DG384700
rosa_wichuraiana	Rw2G021450 Rw7G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1102
Acc36I	ACCTGC	2 cut(s)	677, 1102
AccI	GTMKAC	1 cut(s)	992
AccII	CGCG	4 cut(s)	747, 808, 1277, 1422
AciI	CCGC	3 cut(s)	736, 745, 806
AclWI	GGATC	2 cut(s)	328, 1051
AcoI	YGGCCR	1 cut(s)	9
AcsI	RAATTY	7 cut(s)	137, 205, 368, 674, 899, 1051, 1618
AcuI	CTGAAG	3 cut(s)	102, 342, 1618
AfaI	GTAC	6 cut(s)	506, 597, 801, 836, 1081, 1330
AfeI	AGCGCT	1 cut(s)	1253
AflIII	ACRYGT	2 cut(s)	637, 1420
AgsI	TTSAA	8 cut(s)	76, 266, 557, 592, 626, 1427, 1472, 1687
AjiI	CACGTC	1 cut(s)	1242
AjnI	CCWGG	3 cut(s)	413, 602, 1159
AjuI	GAANNNNNNNTTGG	2 cut(s)	627, 659
Alw21I	GWGCWC	3 cut(s)	1093, 1338, 1563
AlwI	GGATC	2 cut(s)	328, 1051
Aor51HI	AGCGCT	1 cut(s)	1253
AoxI	GGCC	2 cut(s)	9, 1537
ApeKI	GCWGC	5 cut(s)	46, 86, 657, 1376, 1601
ApoI	RAATTY	7 cut(s)	137, 205, 368, 674, 899, 1051, 1618
ArsI	GACNNNNNNTTYG	2 cut(s)	1015, 1047
AseI	ATTAAT	1 cut(s)	483
AspLEI	GCGC	1 cut(s)	1254
AspS9I	GGNCC	6 cut(s)	282, 733, 871, 1384, 1537, 1553
AsuC2I	CCSGG	2 cut(s)	1018, 1204
AsuHPI	GGTGA	5 cut(s)	953, 968, 1165, 1370, 1601
AsuII	TTCGAA	1 cut(s)	421
AsuNHI	GCTAGC	1 cut(s)	1217
AvaII	GGWCC	5 cut(s)	282, 733, 871, 1384, 1553
BaeGI	GKGCMC	1 cut(s)	1420
BanII	GRGCYC	1 cut(s)	721
BauI	CACGAG	1 cut(s)	1488
Bbv12I	GWGCWC	3 cut(s)	1093, 1338, 1563
BbvI	GCAGC	5 cut(s)	58, 98, 669, 1363, 1613
BciT130I	CCWGG	3 cut(s)	415, 604, 1161
BcnI	CCSGG	2 cut(s)	1018, 1204
BfaI	CTAG	6 cut(s)	693, 935, 975, 1005, 1056, 1218
BfoI	RGCGCY	1 cut(s)	1255
BfuAI	ACCTGC	2 cut(s)	677, 1102
BisI	GCNGC	5 cut(s)	47, 87, 658, 1377, 1602
BlsI	GCNGC	5 cut(s)	48, 88, 659, 1378, 1603
Bme1390I	CCNGG	5 cut(s)	415, 604, 1018, 1161, 1204
Bme18I	GGWCC	5 cut(s)	282, 733, 871, 1384, 1553
BmgBI	CACGTC	1 cut(s)	1242
BmgT120I	GGNCC	6 cut(s)	282, 733, 871, 1384, 1537, 1553
BmiI	GGNNCC	3 cut(s)	6, 718, 873
BmrFI	CCNGG	5 cut(s)	415, 604, 1018, 1161, 1204
BmrI	ACTGGG	2 cut(s)	197, 1544
BmsI	GCATC	2 cut(s)	48, 1216
BmtI	GCTAGC	1 cut(s)	1221
BmuI	ACTGGG	2 cut(s)	197, 1544
BplI	GAGNNNNNCTC	2 cut(s)	1241, 1273
Bpu10I	CCTNAGC	2 cut(s)	816, 1557
Bpu14I	TTCGAA	1 cut(s)	421
BpuEI	CTTGAG	1 cut(s)	893
BpuMI	CCSGG	2 cut(s)	1018, 1204
Bsa29I	ATCGAT	2 cut(s)	30, 152
BsaJI	CCNNGG	5 cut(s)	414, 546, 1160, 1380, 1667
Bse1I	ACTGG	7 cut(s)	192, 337, 564, 702, 988, 1372, 1539
BseBI	CCWGG	3 cut(s)	415, 604, 1161
BseCI	ATCGAT	2 cut(s)	30, 152
BseDI	CCNNGG	5 cut(s)	414, 546, 1160, 1380, 1667
BseGI	GGATG	1 cut(s)	706
BseMII	CTCAG	4 cut(s)	153, 1131, 1272, 1548
BseNI	ACTGG	7 cut(s)	192, 337, 564, 702, 988, 1372, 1539
BseRI	GAGGAG	1 cut(s)	1189
BseSI	GKGCMC	1 cut(s)	1420
BseXI	GCAGC	5 cut(s)	58, 98, 669, 1363, 1613
BsgI	GTGCAG	1 cut(s)	631
Bsh1236I	CGCG	4 cut(s)	747, 808, 1277, 1422
BshFI	GGCC	2 cut(s)	11, 1539
BshVI	ATCGAT	2 cut(s)	30, 152
BsiHKAI	GWGCWC	3 cut(s)	1093, 1338, 1563
BsiSI	CCGG	3 cut(s)	8, 1017, 1204
BslFI	GGGAC	1 cut(s)	1587
BsmFI	GGGAC	1 cut(s)	1587
BsnI	GGCC	2 cut(s)	11, 1539
Bsp119I	TTCGAA	1 cut(s)	421
Bsp1286I	GDGCHC	5 cut(s)	721, 1093, 1338, 1420, 1563
Bsp143I	GATC	4 cut(s)	269, 333, 1043, 1437
BspACI	CCGC	3 cut(s)	736, 745, 806
BspANI	GGCC	2 cut(s)	11, 1539
BspCNI	CTCAG	4 cut(s)	154, 1130, 1271, 1549
BspDI	ATCGAT	2 cut(s)	30, 152
BspFNI	CGCG	4 cut(s)	747, 808, 1277, 1422
BspHI	TCATGA	2 cut(s)	456, 889
BspLI	GGNNCC	3 cut(s)	6, 718, 873
BspMI	ACCTGC	2 cut(s)	677, 1102
BspOI	GCTAGC	1 cut(s)	1221
BspPI	GGATC	2 cut(s)	328, 1051
BspT104I	TTCGAA	1 cut(s)	421
BsrI	ACTGG	7 cut(s)	192, 337, 564, 702, 988, 1372, 1539
BssECI	CCNNGG	5 cut(s)	414, 546, 1160, 1380, 1667
BssMI	GATC	4 cut(s)	269, 333, 1043, 1437
BssSI	CACGAG	1 cut(s)	1488
BssT1I	CCWWGG	3 cut(s)	546, 1380, 1667
Bst2BI	CACGAG	1 cut(s)	1488
Bst2UI	CCWGG	3 cut(s)	415, 604, 1161
Bst4CI	ACNGT	4 cut(s)	245, 445, 1512, 1664
BstBI	TTCGAA	1 cut(s)	421
BstC8I	GCNNGC	4 cut(s)	1219, 1287, 1420, 1657
BstDEI	CTNAG	6 cut(s)	162, 816, 1117, 1179, 1258, 1557
BstF5I	GGATG	1 cut(s)	706
BstFNI	CGCG	4 cut(s)	747, 808, 1277, 1422
BstH2I	RGCGCY	1 cut(s)	1255
BstHHI	GCGC	1 cut(s)	1254
BstKTI	GATC	4 cut(s)	272, 336, 1046, 1440
BstMBI	GATC	4 cut(s)	269, 333, 1043, 1437
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 86, 716, 744, 785, 1274, 1644
BstNI	CCWGG	3 cut(s)	415, 604, 1161
BstNSI	RCATGY	2 cut(s)	641, 657
BstSCI	CCNGG	5 cut(s)	413, 602, 1016, 1159, 1202
BstSLI	GKGCMC	1 cut(s)	1420
BstUI	CGCG	4 cut(s)	747, 808, 1277, 1422
BstV1I	GCAGC	5 cut(s)	58, 98, 669, 1363, 1613
BstX2I	RGATCY	2 cut(s)	333, 1043
BstYI	RGATCY	2 cut(s)	333, 1043
Bsu15I	ATCGAT	2 cut(s)	30, 152
BsuRI	GGCC	2 cut(s)	11, 1539
BsuTUI	ATCGAT	2 cut(s)	30, 152
BtgZI	GCGATG	1 cut(s)	488
BtrI	CACGTC	1 cut(s)	1242
BtsCI	GGATG	1 cut(s)	706
BtsI	GCAGTG	1 cut(s)	614
BtsIMutI	CAGTG	1 cut(s)	614
BveI	ACCTGC	2 cut(s)	677, 1102
Cac8I	GCNNGC	4 cut(s)	1219, 1287, 1420, 1657
CciI	TCATGA	2 cut(s)	456, 889
CfoI	GCGC	1 cut(s)	1254
Cfr13I	GGNCC	6 cut(s)	282, 733, 871, 1384, 1537, 1553
ClaI	ATCGAT	2 cut(s)	30, 152
Csp6I	GTAC	6 cut(s)	505, 596, 800, 835, 1080, 1329
CspCI	CAANNNNNGTGG	2 cut(s)	1228, 1263
CviAII	CATG	8 cut(s)	286, 457, 638, 654, 844, 868, 890, 970
CviQI	GTAC	6 cut(s)	505, 596, 800, 835, 1080, 1329
DdeI	CTNAG	6 cut(s)	162, 816, 1117, 1179, 1258, 1557
DpnI	GATC	4 cut(s)	271, 335, 1045, 1439
DpnII	GATC	4 cut(s)	269, 333, 1043, 1437
DraI	TTTAAA	1 cut(s)	1039
EaeI	YGGCCR	1 cut(s)	9
Eco130I	CCWWGG	3 cut(s)	546, 1380, 1667
Eco24I	GRGCYC	1 cut(s)	721
Eco47I	GGWCC	5 cut(s)	282, 733, 871, 1384, 1553
Eco47III	AGCGCT	1 cut(s)	1253
Eco57I	CTGAAG	3 cut(s)	102, 342, 1618
EcoO109I	RGGNCCY	1 cut(s)	1384
EcoRII	CCWGG	3 cut(s)	413, 602, 1159
EcoT14I	CCWWGG	3 cut(s)	546, 1380, 1667
EcoT38I	GRGCYC	1 cut(s)	721
ErhI	CCWWGG	3 cut(s)	546, 1380, 1667
FaeI	CATG	8 cut(s)	289, 460, 641, 657, 847, 871, 893, 973
FalI	AAGNNNNNCTT	4 cut(s)	55, 87, 749, 781
FaqI	GGGAC	1 cut(s)	1587
FatI	CATG	8 cut(s)	285, 456, 637, 653, 843, 867, 889, 969
FblI	GTMKAC	1 cut(s)	992
Fnu4HI	GCNGC	5 cut(s)	47, 87, 658, 1377, 1602
FokI	GGATG	1 cut(s)	713
FriOI	GRGCYC	1 cut(s)	721
Fsp4HI	GCNGC	5 cut(s)	47, 87, 658, 1377, 1602
FspBI	CTAG	6 cut(s)	693, 935, 975, 1005, 1056, 1218
GlaI	GCGC	1 cut(s)	1253
GluI	GCNGC	5 cut(s)	47, 87, 658, 1377, 1602
HaeII	RGCGCY	1 cut(s)	1255
HaeIII	GGCC	2 cut(s)	11, 1539
HapII	CCGG	3 cut(s)	8, 1017, 1204
HhaI	GCGC	1 cut(s)	1254
Hin1II	CATG	8 cut(s)	289, 460, 641, 657, 847, 871, 893, 973
Hin6I	GCGC	1 cut(s)	1252
HinP1I	GCGC	1 cut(s)	1252
HincII	GTYRAC	2 cut(s)	666, 690
HindII	GTYRAC	2 cut(s)	666, 690
HindIII	AAGCTT	2 cut(s)	69, 1025
HinfI	GANTC	3 cut(s)	392, 1122, 1401
HpaI	GTTAAC	1 cut(s)	690
HpaII	CCGG	3 cut(s)	8, 1017, 1204
HphI	GGTGA	5 cut(s)	953, 968, 1165, 1370, 1601
Hpy166II	GTNNAC	6 cut(s)	576, 666, 690, 865, 993, 1080
Hpy188I	TCNGA	3 cut(s)	795, 1048, 1261
Hpy8I	GTNNAC	6 cut(s)	576, 666, 690, 865, 993, 1080
Hpy99I	CGWCG	1 cut(s)	1246
HpyAV	CCTTC	6 cut(s)	317, 724, 790, 920, 1355, 1580
HpyCH4III	ACNGT	4 cut(s)	245, 445, 1512, 1664
HpyCH4IV	ACGT	1 cut(s)	1241
HpyCH4V	TGCA	8 cut(s)	61, 569, 612, 657, 672, 1097, 1289, 1493
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 86, 716, 744, 785, 1274, 1644
HpyF3I	CTNAG	6 cut(s)	162, 816, 1117, 1179, 1258, 1557
HpySE526I	ACGT	1 cut(s)	1241
Hsp92II	CATG	8 cut(s)	289, 460, 641, 657, 847, 871, 893, 973
HspAI	GCGC	1 cut(s)	1252
KspAI	GTTAAC	1 cut(s)	690
Kzo9I	GATC	4 cut(s)	269, 333, 1043, 1437
LmnI	GCTCC	1 cut(s)	716
Lsp1109I	GCAGC	5 cut(s)	58, 98, 669, 1363, 1613
LweI	GCATC	2 cut(s)	48, 1216
MaeI	CTAG	6 cut(s)	693, 935, 975, 1005, 1056, 1218
MaeII	ACGT	1 cut(s)	1241
MaeIII	GTNAC	4 cut(s)	374, 941, 1313, 1512
MalI	GATC	4 cut(s)	271, 335, 1045, 1439
MboI	GATC	4 cut(s)	269, 333, 1043, 1437
MboII	GAAGA	3 cut(s)	67, 377, 841
MfeI	CAATTG	2 cut(s)	261, 273
MflI	RGATCY	2 cut(s)	333, 1043
MhlI	GDGCHC	5 cut(s)	721, 1093, 1338, 1420, 1563
MluI	ACGCGT	1 cut(s)	1420
MlyI	GAGTC	1 cut(s)	1116
MspI	CCGG	3 cut(s)	8, 1017, 1204
MspR9I	CCNGG	5 cut(s)	415, 604, 1018, 1161, 1204
MunI	CAATTG	2 cut(s)	261, 273
MvaI	CCWGG	3 cut(s)	415, 604, 1161
MvnI	CGCG	4 cut(s)	747, 808, 1277, 1422
MwoI	GCNNNNNNNGC	7 cut(s)	77, 86, 716, 744, 785, 1274, 1644
NciI	CCSGG	2 cut(s)	1018, 1204
NdeII	GATC	4 cut(s)	269, 333, 1043, 1437
NheI	GCTAGC	1 cut(s)	1217
NlaIII	CATG	8 cut(s)	289, 460, 641, 657, 847, 871, 893, 973
NlaIV	GGNNCC	3 cut(s)	6, 718, 873
NmuCI	GTSAC	3 cut(s)	941, 1313, 1512
NspI	RCATGY	2 cut(s)	641, 657
NspV	TTCGAA	1 cut(s)	421
PagI	TCATGA	2 cut(s)	456, 889
PaqCI	CACCTGC	1 cut(s)	1102
PciI	ACATGT	1 cut(s)	637
PcsI	WCGNNNNNNNCGW	1 cut(s)	1495
PfeI	GAWTC	2 cut(s)	392, 1401
PkrI	GCNGC	5 cut(s)	48, 88, 659, 1378, 1603
PleI	GAGTC	1 cut(s)	1116
PpsI	GAGTC	1 cut(s)	1116
PpuMI	RGGWCCY	1 cut(s)	1384
PscI	ACATGT	1 cut(s)	637
PshBI	ATTAAT	1 cut(s)	483
Psp5II	RGGWCCY	1 cut(s)	1384
Psp6I	CCWGG	3 cut(s)	413, 602, 1159
PspGI	CCWGG	3 cut(s)	413, 602, 1159
PspN4I	GGNNCC	3 cut(s)	6, 718, 873
PspPI	GGNCC	6 cut(s)	282, 733, 871, 1384, 1537, 1553
PspPPI	RGGWCCY	1 cut(s)	1384
PsuI	RGATCY	2 cut(s)	333, 1043
RsaI	GTAC	6 cut(s)	506, 597, 801, 836, 1081, 1330
RsaNI	GTAC	6 cut(s)	505, 596, 800, 835, 1080, 1329
SatI	GCNGC	5 cut(s)	47, 87, 658, 1377, 1602
Sau3AI	GATC	4 cut(s)	269, 333, 1043, 1437
Sau96I	GGNCC	6 cut(s)	282, 733, 871, 1384, 1537, 1553
SchI	GAGTC	1 cut(s)	1116
ScrFI	CCNGG	5 cut(s)	415, 604, 1018, 1161, 1204
SduI	GDGCHC	5 cut(s)	721, 1093, 1338, 1420, 1563
SfaNI	GCATC	2 cut(s)	48, 1216
SfuI	TTCGAA	1 cut(s)	421
SinI	GGWCC	5 cut(s)	282, 733, 871, 1384, 1553
SmlI	CTYRAG	1 cut(s)	908
SmoI	CTYRAG	1 cut(s)	908
SsiI	CCGC	3 cut(s)	736, 745, 806
SspI	AATATT	2 cut(s)	523, 1000
SspMI	CTAG	6 cut(s)	693, 935, 975, 1005, 1056, 1218
StyD4I	CCNGG	5 cut(s)	413, 602, 1016, 1159, 1202
StyI	CCWWGG	3 cut(s)	546, 1380, 1667
TaaI	ACNGT	4 cut(s)	245, 445, 1512, 1664
TaiI	ACGT	1 cut(s)	1244
TaqI	TCGA	4 cut(s)	30, 152, 421, 1528
TatI	WGTACW	2 cut(s)	595, 1079
TfiI	GAWTC	2 cut(s)	392, 1401
TscAI	CASTG	1 cut(s)	614
TseFI	GTSAC	3 cut(s)	941, 1313, 1512
TseI	GCWGC	5 cut(s)	46, 86, 657, 1376, 1601
Tsp45I	GTSAC	3 cut(s)	941, 1313, 1512
TspDTI	ATGAA	5 cut(s)	110, 473, 860, 878, 906
TspGWI	ACGGA	3 cut(s)	423, 544, 1115
TspRI	CASTG	1 cut(s)	614
VpaK11BI	GGWCC	5 cut(s)	282, 733, 871, 1384, 1553
VspI	ATTAAT	1 cut(s)	483
XapI	RAATTY	7 cut(s)	137, 205, 368, 674, 899, 1051, 1618
XbaI	TCTAGA	1 cut(s)	1055
XceI	RCATGY	2 cut(s)	641, 657
XcmI	CCANNNNNNNNNTGG	2 cut(s)	521, 1547
XmiI	GTMKAC	1 cut(s)	992
XspI	CTAG	6 cut(s)	693, 935, 975, 1005, 1056, 1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.