Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001715

Physical Location & Seq

Genomic Coordinates Forward (+)

19477523 .. 19486841

Gene Structure 9319 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001714

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGTCGGAGCCAATCATCCTCTCCGACGAAGAAGACCAAATTCCGCCCTCAATCCTCTTCCACTCCGTCAAGAAACGCCGAACCGGACCCGGCCCAAACCCAAACCCAAACCCAAACCCTACTGTTCTAATCCTCGACGATGATGACGCCACCCCACGCCAGTTCCCCGCCTCCACCTCCACGTCCTACTTTGAATCGCCGAGCTCCGACATCGAAGTTGTGAAATGCACAAGAGCCCCGTCCGGAGACCTAACTAGGGTTCATGGTTCCGGCCACAAGTCCTCTGGAATTGATGGATTGATATGTTTGGAATCTGATGACGATGACTCTGAAAGCGGTTCTGGAGGGGAAAAGGAGAAGGAGAATGAATCCATCACTAGCGGTTTCGGCAGGGTGGAGGACCTGGATTTGAGTTATAGAGATGTTACGACGACATGTTCTCTTGGACATACTGATCTAGCACATATTACGGAAGAGGAAACAAAAGAAGCAAAGAAAAGAAAAAAGATGACAAAAGATGAAAGGGCACAATTAATGGAAGAAAAGAAGCTGAAGAAGCTACAAGAGAAGATGCAAAGAGAAGCTCTGAAAGCTGAAGCAGCAGATATGAAAAAGATACAGAAAGAAAGGCAAAGGTGGGAGAAAGGGAAATTTGCCTTAAAATCGATTGTGGCTGAGATTGATTGTAAAGTTGCGGAACTGGGGTCACTAGGAGGAAATTTGCTTACAAGGTTTGCTGAAAGAGGGCTATCATACCGTATAAAAGCAAATCCAATTGAAAGATCAATTGTCTGGACCATGACAGTTCCAGAACACTTTTCACAGCTTTTTCCTGAAGGAATAGAGATCCAGTATATATTGCTTGTGTATGAGGCAGAAGAATTTTGTAACCTTGTCATCAAGGATTCTCTTCTGGAACATATTGCCAGGGTTCGAAGTATTTATCCGTCTTATACAGTTTGTTATCTCATGAATAGGTCTATGGCGATGTATATTAATAATAGGGAACAAGAAGCGTACAAGAACCAAACAAATATTGGGCGGACATACCCAACTGCCAAGGAGGTTGAACTGGTGTTTGCAAAGTTTACCACCAATTTTTTCAAAGTACATTCCAGGCAGTGCAGAGATGAGGTTGAACTTGCTGAACATGTTGTTGGTTTGACATGCAGCCTGTCAACCTGCAAATTTAGAAAGAAGTTAACTAGACTGGATGTAAATGCTAATGGAGCCCTTATCACGAAGGACCGCATTGATGGCGATTTATTAAAGAACAACTTATGGTTAAGAGCTTTGGTAGCTATTCCAAAGGTACAACCGCGATTTGCTAAGGCTATATGGAAGAAGTACCCTACCATGAAATCTCTTTTGAGTGTTTACATGGACCCGATAATATCAGTTCATGAAAAGGAATTTCTGCTCAAGGATTTGACAACAGAAGGCTTACTAGGTGGTGACAGAAAAGTAGTGCTTTTCCTTGTATGGACAAACCTAGGTATCATGGCTAGGGTTTTCGTCCTGTCGACTAATATTCCTAGTGTGGTTGCCGGGCGAAAGCTTGGTCAATTTGAAGGATCTGAAAATTCTAGAAAGGCAACAAAGATGATGTGTACTTTACGAGCACCTGCATTGAGATTGAGCAGTTTCTCAGGACTCAGTAGTGTTAATGTCTTAGATATTATGGTGAAGCCTGGGCAAGACTTATATTCTAAGGTGGGAGAAGCTATCTCCTCCCGGAATCGAAAGGCGAGCAGATGTGTGCCTAAAGCCACGTCGTTTCATCGCTTCTCAGAAAAGGCAATAAAAGCGATTATGCTTGCACAAGAGGAAACAAGGCGAATTGGTCACGACTTTGTTGGTACAGAGCACATACTTTTGGGTCTTGTTGGTGAAGGAACTGGAATTGCTGCCAAGGTCCTTAAATCTATGGGAATCAATCTTAGAGGTGCACGCGTTGAAGTGAAAAAGATCATTGGAACGGGTCGTGGCTTTGTTGCTCTTGAAATCCCATTCACTTCTCGTGCAGAGCGAGTTTTGGAACTGTCACAGGAGGAAGCTCGACAACTGGGTGAGGGTGTGGCAGCTTGTGTTCTTAAAAATTTAGGTGCTGACCTCAGCAACATTCGCACACAGGCAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009987 GO:0010212 GO:0010332 GO:0016787 GO:0016788 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

ERCC4

Protein Analysis

714

Amino Acids

79.55

Weight (kDa)

8.92

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	240 - 386	3.6e-10	ERCC4 domain
Clp_N	PF02861	595 - 691	3.1e-21	Clp repeat (R) N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21800 AT2G21800 AT2G21800 AT2G22140 AT2G22140
fragaria_vesca	FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_5g31350 FvH4_5g31350
malus_domestica	MD15G1335700.v1.1 MD15G1404100.v1.1
prunus_persica	Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.6G166800_v2.0.a1
pyrus_communis	pycom15g28970
rosa_chinensis	RchiOBHm_Chr2g0117911 RchiOBHm_Chr7g0226601 RchiOBHm_Chr7g0226611 RchiOBHm_Chr7g0228631
rosa_laevigata	RLG00000001714 RLG00000018383
rosa_multiflora	Rmu_sc0001423.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126110 Rroxscaffold_3G00230990 Rroxscaffold_3G00232670
rosa_rugosa	Rorug02G0214800 Rorug02G0214900 Rorug02G0214900 Rorug07G0238500 Rorug07G0238600
rosa_samantha	Rh2AG271200 Rh2BG282800 Rh2DG279100 Rh2DG297000 Rh7AG386100 Rh7AG403200 Rh7BG372700 Rh7BG372800 Rh7CG405400 Rh7CG422500 Rh7DG384700
rosa_wichuraiana	Rw2G021450 Rw7G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1633
Acc36I	ACCTGC	2 cut(s)	1190, 1633
AccI	GTMKAC	1 cut(s)	1523
AccII	CGCG	2 cut(s)	1321, 1953
AccIII	TCCGGA	1 cut(s)	242
AciI	CCGC	8 cut(s)	44, 168, 336, 381, 695, 1042, 1249, 1319
AclWI	GGATC	2 cut(s)	841, 1582
AcoI	YGGCCR	1 cut(s)	271
AcsI	RAATTY	8 cut(s)	39, 650, 718, 881, 1187, 1412, 1582, 2098
AcuI	CTGAAG	3 cut(s)	572, 615, 855
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	6 cut(s)	1019, 1110, 1314, 1349, 1612, 1861
AfiI	CCNNNNNNNGG	1 cut(s)	256
AflIII	ACRYGT	3 cut(s)	434, 1150, 1951
AgsI	TTSAA	8 cut(s)	194, 779, 1070, 1105, 1139, 1571, 1958, 2003
AjiI	CACGTC	2 cut(s)	183, 1773
AjnI	CCWGG	4 cut(s)	402, 926, 1115, 1690
AjuI	GAANNNNNNNTTGG	2 cut(s)	1140, 1172
Alw21I	GWGCWC	4 cut(s)	206, 1624, 1869, 1951
Alw26I	GTCTC	1 cut(s)	240
Alw44I	GTGCAC	1 cut(s)	1947
AlwI	GGATC	2 cut(s)	841, 1582
Aor13HI	TCCGGA	1 cut(s)	242
AoxI	GGCC	2 cut(s)	91, 271
ApaLI	GTGCAC	1 cut(s)	1947
ApeKI	GCWGC	4 cut(s)	599, 1170, 1907, 2081
ApoI	RAATTY	8 cut(s)	39, 650, 718, 881, 1187, 1412, 1582, 2098
ArsI	GACNNNNNNTTYG	2 cut(s)	1546, 1578
AseI	ATTAAT	2 cut(s)	533, 996
AspA2I	CCTAGG	1 cut(s)	1492
AspS9I	GGNCC	7 cut(s)	86, 92, 400, 795, 1246, 1384, 1915
AsuC2I	CCSGG	3 cut(s)	90, 1549, 1735
AsuHPI	GGTGA	4 cut(s)	1466, 1696, 1901, 2081
AsuII	TTCGAA	1 cut(s)	934
AvaII	GGWCC	6 cut(s)	86, 400, 795, 1246, 1384, 1915
AvrII	CCTAGG	1 cut(s)	1492
BaeGI	GKGCMC	2 cut(s)	529, 1951
BaeI	ACNNNNGTAYC	2 cut(s)	1480, 1513
BanII	GRGCYC	3 cut(s)	206, 238, 1234
BauI	CACGAG	1 cut(s)	2019
BbsI	GAAGAC	1 cut(s)	39
Bbv12I	GWGCWC	4 cut(s)	206, 1624, 1869, 1951
BbvCI	CCTCAGC	1 cut(s)	2114
BbvI	GCAGC	4 cut(s)	611, 1182, 1894, 2093
BccI	CCATC	3 cut(s)	287, 380, 1250
BciT130I	CCWGG	4 cut(s)	404, 928, 1117, 1692
BcnI	CCSGG	3 cut(s)	90, 1549, 1735
BcoDI	GTCTC	1 cut(s)	240
BfuAI	ACCTGC	2 cut(s)	1190, 1633
BisI	GCNGC	4 cut(s)	600, 1171, 1908, 2082
BlnI	CCTAGG	1 cut(s)	1492
BlsI	GCNGC	4 cut(s)	601, 1172, 1909, 2083
Bme1390I	CCNGG	7 cut(s)	90, 404, 928, 1117, 1549, 1692, 1735
Bme18I	GGWCC	6 cut(s)	86, 400, 795, 1246, 1384, 1915
BmgBI	CACGTC	2 cut(s)	183, 1773
BmgT120I	GGNCC	7 cut(s)	86, 92, 400, 795, 1246, 1384, 1915
BmiI	GGNNCC	5 cut(s)	9, 88, 268, 1231, 1386
BmrFI	CCNGG	7 cut(s)	90, 404, 928, 1117, 1549, 1692, 1735
BmrI	ACTGGG	2 cut(s)	710, 2075
BmsI	GCATC	1 cut(s)	561
BmuI	ACTGGG	2 cut(s)	710, 2075
BpiI	GAAGAC	1 cut(s)	39
BpmI	CTGGAG	1 cut(s)	363
Bpu10I	CCTNAGC	2 cut(s)	1329, 2114
Bpu14I	TTCGAA	1 cut(s)	934
BpuEI	CTTGAG	1 cut(s)	1406
BpuMI	CCSGG	3 cut(s)	90, 1549, 1735
Bsa29I	ATCGAT	1 cut(s)	665
BsaHI	GRCGYC	1 cut(s)	147
BsaI	GGTCTC	1 cut(s)	240
BsaJI	CCNNGG	5 cut(s)	927, 1059, 1492, 1691, 1911
BsaWI	WCCGGW	2 cut(s)	83, 242
Bsc4I	CCNNNNNNNGG	1 cut(s)	256
Bse1I	ACTGG	7 cut(s)	160, 705, 850, 1077, 1215, 1903, 2070
BseAI	TCCGGA	1 cut(s)	242
BseBI	CCWGG	4 cut(s)	404, 928, 1117, 1692
BseCI	ATCGAT	1 cut(s)	665
BseDI	CCNNGG	5 cut(s)	927, 1059, 1492, 1691, 1911
BseGI	GGATG	2 cut(s)	15, 1219
BseLI	CCNNNNNNNGG	1 cut(s)	256
BseMII	CTCAG	5 cut(s)	666, 1662, 1669, 1803, 2128
BseNI	ACTGG	7 cut(s)	160, 705, 850, 1077, 1215, 1903, 2070
BseRI	GAGGAG	1 cut(s)	1720
BseSI	GKGCMC	2 cut(s)	529, 1951
BseXI	GCAGC	4 cut(s)	611, 1182, 1894, 2093
BsgI	GTGCAG	2 cut(s)	1144, 2043
Bsh1236I	CGCG	2 cut(s)	1321, 1953
BshFI	GGCC	2 cut(s)	93, 273
BshVI	ATCGAT	1 cut(s)	665
BsiHKAI	GWGCWC	4 cut(s)	206, 1624, 1869, 1951
BsiSI	CCGG	6 cut(s)	84, 90, 243, 270, 1548, 1735
BslI	CCNNNNNNNGG	1 cut(s)	256
BsmAI	GTCTC	1 cut(s)	240
BsnI	GGCC	2 cut(s)	93, 273
Bso31I	GGTCTC	1 cut(s)	240
Bsp119I	TTCGAA	1 cut(s)	934
Bsp1286I	GDGCHC	7 cut(s)	206, 238, 529, 1234, 1624, 1869, 1951
Bsp13I	TCCGGA	1 cut(s)	242
Bsp143I	GATC	5 cut(s)	454, 782, 846, 1574, 1968
BspACI	CCGC	8 cut(s)	44, 168, 336, 381, 695, 1042, 1249, 1319
BspANI	GGCC	2 cut(s)	93, 273
BspCNI	CTCAG	5 cut(s)	667, 1661, 1668, 1802, 2127
BspDI	ATCGAT	1 cut(s)	665
BspEI	TCCGGA	1 cut(s)	242
BspFNI	CGCG	2 cut(s)	1321, 1953
BspHI	TCATGA	2 cut(s)	969, 1402
BspLI	GGNNCC	5 cut(s)	9, 88, 268, 1231, 1386
BspMI	ACCTGC	2 cut(s)	1190, 1633
BspPI	GGATC	2 cut(s)	841, 1582
BspT104I	TTCGAA	1 cut(s)	934
BspTNI	GGTCTC	1 cut(s)	240
BsrI	ACTGG	7 cut(s)	160, 705, 850, 1077, 1215, 1903, 2070
BssECI	CCNNGG	5 cut(s)	927, 1059, 1492, 1691, 1911
BssMI	GATC	5 cut(s)	454, 782, 846, 1574, 1968
BssNI	GRCGYC	1 cut(s)	147
BssSI	CACGAG	1 cut(s)	2019
BssT1I	CCWWGG	3 cut(s)	1059, 1492, 1911
Bst2BI	CACGAG	1 cut(s)	2019
Bst2UI	CCWGG	4 cut(s)	404, 928, 1117, 1692
Bst4CI	ACNGT	5 cut(s)	124, 758, 805, 958, 2043
Bst6I	CTCTTC	3 cut(s)	62, 468, 915
BstACI	GRCGYC	1 cut(s)	147
BstBI	TTCGAA	1 cut(s)	934
BstC8I	GCNNGC	4 cut(s)	1750, 1818, 1951, 2137
BstDEI	CTNAG	9 cut(s)	675, 1329, 1648, 1655, 1672, 1710, 1789, 1940, 2114
BstF5I	GGATG	2 cut(s)	15, 1219
BstFNI	CGCG	2 cut(s)	1321, 1953
BstKTI	GATC	5 cut(s)	457, 785, 849, 1577, 1971
BstMAI	GTCTC	1 cut(s)	240
BstMBI	GATC	5 cut(s)	454, 782, 846, 1574, 1968
BstMWI	GCNNNNNNNGC	9 cut(s)	387, 556, 590, 599, 1229, 1257, 1298, 1805, 2124
BstNI	CCWGG	4 cut(s)	404, 928, 1117, 1692
BstNSI	RCATGY	3 cut(s)	438, 1154, 1170
BstSCI	CCNGG	7 cut(s)	88, 402, 926, 1115, 1547, 1690, 1733
BstSLI	GKGCMC	2 cut(s)	529, 1951
BstUI	CGCG	2 cut(s)	1321, 1953
BstV1I	GCAGC	4 cut(s)	611, 1182, 1894, 2093
BstV2I	GAAGAC	1 cut(s)	39
BstX2I	RGATCY	2 cut(s)	846, 1574
BstYI	RGATCY	2 cut(s)	846, 1574
Bsu15I	ATCGAT	1 cut(s)	665
BsuRI	GGCC	2 cut(s)	93, 273
BsuTUI	ATCGAT	1 cut(s)	665
BtgZI	GCGATG	2 cut(s)	1001, 1766
BtrI	CACGTC	2 cut(s)	183, 1773
BtsCI	GGATG	2 cut(s)	15, 1219
BtsI	GCAGTG	1 cut(s)	1127
BtsIMutI	CAGTG	1 cut(s)	1127
BveI	ACCTGC	2 cut(s)	1190, 1633
Cac8I	GCNNGC	4 cut(s)	1750, 1818, 1951, 2137
CciI	TCATGA	2 cut(s)	969, 1402
Cfr13I	GGNCC	7 cut(s)	86, 92, 400, 795, 1246, 1384, 1915
ClaI	ATCGAT	1 cut(s)	665
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	6 cut(s)	1018, 1109, 1313, 1348, 1611, 1860
CviQI	GTAC	6 cut(s)	1018, 1109, 1313, 1348, 1611, 1860
DdeI	CTNAG	9 cut(s)	675, 1329, 1648, 1655, 1672, 1710, 1789, 1940, 2114
DpnI	GATC	5 cut(s)	456, 784, 848, 1576, 1970
DpnII	GATC	5 cut(s)	454, 782, 846, 1574, 1968
EaeI	YGGCCR	1 cut(s)	271
Eam1104I	CTCTTC	3 cut(s)	62, 468, 915
EarI	CTCTTC	3 cut(s)	62, 468, 915
EciI	GGCGGA	2 cut(s)	33, 1057
Ecl136II	GAGCTC	1 cut(s)	204
Eco130I	CCWWGG	3 cut(s)	1059, 1492, 1911
Eco24I	GRGCYC	3 cut(s)	206, 238, 1234
Eco31I	GGTCTC	1 cut(s)	240
Eco47I	GGWCC	6 cut(s)	86, 400, 795, 1246, 1384, 1915
Eco53kI	GAGCTC	1 cut(s)	204
Eco57I	CTGAAG	3 cut(s)	572, 615, 855
EcoICRI	GAGCTC	1 cut(s)	204
EcoO109I	RGGNCCY	2 cut(s)	400, 1915
EcoRII	CCWGG	4 cut(s)	402, 926, 1115, 1690
EcoT14I	CCWWGG	3 cut(s)	1059, 1492, 1911
EcoT38I	GRGCYC	3 cut(s)	206, 238, 1234
ErhI	CCWWGG	3 cut(s)	1059, 1492, 1911
FalI	AAGNNNNNCTT	4 cut(s)	1262, 1294, 1455, 1487
FauI	CCCGC	1 cut(s)	175
FblI	GTMKAC	1 cut(s)	1523
Fnu4HI	GCNGC	4 cut(s)	600, 1171, 1908, 2082
FokI	GGATG	2 cut(s)	2, 1226
FriOI	GRGCYC	3 cut(s)	206, 238, 1234
Fsp4HI	GCNGC	4 cut(s)	600, 1171, 1908, 2082
GluI	GCNGC	4 cut(s)	600, 1171, 1908, 2082
GsuI	CTGGAG	1 cut(s)	363
HaeIII	GGCC	2 cut(s)	93, 273
HapII	CCGG	6 cut(s)	84, 90, 243, 270, 1548, 1735
HgaI	GACGC	1 cut(s)	155
Hin1I	GRCGYC	1 cut(s)	147
HincII	GTYRAC	3 cut(s)	1179, 1203, 1524
HindII	GTYRAC	3 cut(s)	1179, 1203, 1524
HindIII	AAGCTT	1 cut(s)	1556
HinfI	GANTC	8 cut(s)	194, 311, 326, 368, 905, 1653, 1738, 1932
HpaI	GTTAAC	1 cut(s)	1203
HpaII	CCGG	6 cut(s)	84, 90, 243, 270, 1548, 1735
HphI	GGTGA	4 cut(s)	1466, 1696, 1901, 2081
Hpy166II	GTNNAC	7 cut(s)	1089, 1179, 1203, 1378, 1524, 1611, 1949
Hpy188I	TCNGA	8 cut(s)	7, 25, 208, 316, 331, 588, 1579, 1792
Hpy8I	GTNNAC	7 cut(s)	1089, 1179, 1203, 1378, 1524, 1611, 1949
Hpy99I	CGWCG	4 cut(s)	29, 140, 433, 1777
HpyAV	CCTTC	6 cut(s)	352, 830, 1237, 1433, 1565, 1886
HpyCH4III	ACNGT	5 cut(s)	124, 758, 805, 958, 2043
HpyCH4IV	ACGT	2 cut(s)	182, 1772
HpyF10VI	GCNNNNNNNGC	9 cut(s)	387, 556, 590, 599, 1229, 1257, 1298, 1805, 2124
HpyF3I	CTNAG	9 cut(s)	675, 1329, 1648, 1655, 1672, 1710, 1789, 1940, 2114
HpySE526I	ACGT	2 cut(s)	182, 1772
Hsp92I	GRCGYC	1 cut(s)	147
Kpn2I	TCCGGA	1 cut(s)	242
KspAI	GTTAAC	1 cut(s)	1203
Kzo9I	GATC	5 cut(s)	454, 782, 846, 1574, 1968
LmnI	GCTCC	3 cut(s)	7, 209, 1229
Lsp1109I	GCAGC	4 cut(s)	611, 1182, 1894, 2093
LweI	GCATC	1 cut(s)	561
MaeII	ACGT	2 cut(s)	182, 1772
MaeIII	GTNAC	6 cut(s)	424, 705, 887, 1454, 1844, 2043
MalI	GATC	5 cut(s)	456, 784, 848, 1576, 1970
MboI	GATC	5 cut(s)	454, 782, 846, 1574, 1968
MfeI	CAATTG	2 cut(s)	774, 786
MflI	RGATCY	2 cut(s)	846, 1574
MhlI	GDGCHC	7 cut(s)	206, 238, 529, 1234, 1624, 1869, 1951
MluI	ACGCGT	1 cut(s)	1951
MlyI	GAGTC	2 cut(s)	320, 1647
MmeI	TCCRAC	2 cut(s)	48, 231
MroI	TCCGGA	1 cut(s)	242
MseI	TTAA	9 cut(s)	533, 659, 996, 1202, 1268, 1286, 1665, 1920, 2094
MspI	CCGG	6 cut(s)	84, 90, 243, 270, 1548, 1735
MspR9I	CCNGG	7 cut(s)	90, 404, 928, 1117, 1549, 1692, 1735
MunI	CAATTG	2 cut(s)	774, 786
MvaI	CCWGG	4 cut(s)	404, 928, 1117, 1692
MvnI	CGCG	2 cut(s)	1321, 1953
MwoI	GCNNNNNNNGC	9 cut(s)	387, 556, 590, 599, 1229, 1257, 1298, 1805, 2124
NciI	CCSGG	3 cut(s)	90, 1549, 1735
NdeII	GATC	5 cut(s)	454, 782, 846, 1574, 1968
NlaIV	GGNNCC	5 cut(s)	9, 88, 268, 1231, 1386
NmeAIII	GCCGAG	1 cut(s)	225
NmuCI	GTSAC	4 cut(s)	705, 1454, 1844, 2043
NspI	RCATGY	3 cut(s)	438, 1154, 1170
NspV	TTCGAA	1 cut(s)	934
PagI	TCATGA	2 cut(s)	969, 1402
PaqCI	CACCTGC	1 cut(s)	1633
PciI	ACATGT	2 cut(s)	434, 1150
PcsI	WCGNNNNNNNCGW	1 cut(s)	2026
PfeI	GAWTC	6 cut(s)	194, 311, 368, 905, 1738, 1932
PfoI	TCCNGGA	1 cut(s)	1733
PkrI	GCNGC	4 cut(s)	601, 1172, 1909, 2083
PleI	GAGTC	2 cut(s)	320, 1647
PpsI	GAGTC	2 cut(s)	320, 1647
PpuMI	RGGWCCY	2 cut(s)	400, 1915
PscI	ACATGT	2 cut(s)	434, 1150
PshBI	ATTAAT	2 cut(s)	533, 996
Psp124BI	GAGCTC	1 cut(s)	206
Psp5II	RGGWCCY	2 cut(s)	400, 1915
Psp6I	CCWGG	4 cut(s)	402, 926, 1115, 1690
PspGI	CCWGG	4 cut(s)	402, 926, 1115, 1690
PspN4I	GGNNCC	5 cut(s)	9, 88, 268, 1231, 1386
PspPI	GGNCC	7 cut(s)	86, 92, 400, 795, 1246, 1384, 1915
PspPPI	RGGWCCY	2 cut(s)	400, 1915
PsuI	RGATCY	2 cut(s)	846, 1574
RsaI	GTAC	6 cut(s)	1019, 1110, 1314, 1349, 1612, 1861
RsaNI	GTAC	6 cut(s)	1018, 1109, 1313, 1348, 1611, 1860
SacI	GAGCTC	1 cut(s)	206
SalI	GTCGAC	1 cut(s)	1522
SaqAI	TTAA	9 cut(s)	533, 659, 996, 1202, 1268, 1286, 1665, 1920, 2094
SatI	GCNGC	4 cut(s)	600, 1171, 1908, 2082
Sau3AI	GATC	5 cut(s)	454, 782, 846, 1574, 1968
Sau96I	GGNCC	7 cut(s)	86, 92, 400, 795, 1246, 1384, 1915
SchI	GAGTC	2 cut(s)	320, 1647
ScrFI	CCNGG	7 cut(s)	90, 404, 928, 1117, 1549, 1692, 1735
SduI	GDGCHC	7 cut(s)	206, 238, 529, 1234, 1624, 1869, 1951
SfaNI	GCATC	1 cut(s)	561
SfuI	TTCGAA	1 cut(s)	934
SinI	GGWCC	6 cut(s)	86, 400, 795, 1246, 1384, 1915
SmlI	CTYRAG	1 cut(s)	1421
SmoI	CTYRAG	1 cut(s)	1421
SsiI	CCGC	8 cut(s)	44, 168, 336, 381, 695, 1042, 1249, 1319
SspI	AATATT	2 cut(s)	1036, 1531
SstI	GAGCTC	1 cut(s)	206
StyD4I	CCNGG	7 cut(s)	88, 402, 926, 1115, 1547, 1690, 1733
StyI	CCWWGG	3 cut(s)	1059, 1492, 1911
TaaI	ACNGT	5 cut(s)	124, 758, 805, 958, 2043
TaiI	ACGT	2 cut(s)	185, 1775
TaqI	TCGA	7 cut(s)	135, 213, 665, 934, 1523, 1741, 2059
TatI	WGTACW	2 cut(s)	1108, 1610
TfiI	GAWTC	6 cut(s)	194, 311, 368, 905, 1738, 1932
Tru1I	TTAA	9 cut(s)	533, 659, 996, 1202, 1268, 1286, 1665, 1920, 2094
Tru9I	TTAA	9 cut(s)	533, 659, 996, 1202, 1268, 1286, 1665, 1920, 2094
TscAI	CASTG	1 cut(s)	1127
TseFI	GTSAC	4 cut(s)	705, 1454, 1844, 2043
TseI	GCWGC	4 cut(s)	599, 1170, 1907, 2081
Tsp45I	GTSAC	4 cut(s)	705, 1454, 1844, 2043
TspDTI	ATGAA	9 cut(s)	251, 381, 534, 623, 986, 1373, 1391, 1419, 1769
TspGWI	ACGGA	3 cut(s)	55, 485, 936
TspRI	CASTG	1 cut(s)	1127
VneI	GTGCAC	1 cut(s)	1947
VpaK11BI	GGWCC	6 cut(s)	86, 400, 795, 1246, 1384, 1915
VspI	ATTAAT	2 cut(s)	533, 996
XapI	RAATTY	8 cut(s)	39, 650, 718, 881, 1187, 1412, 1582, 2098
XbaI	TCTAGA	1 cut(s)	1586
XceI	RCATGY	3 cut(s)	438, 1154, 1170
XcmI	CCANNNNNNNNNTGG	2 cut(s)	281, 1034
XmaJI	CCTAGG	1 cut(s)	1492
XmiI	GTMKAC	1 cut(s)	1523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.