Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0001715

Physical Location & Seq

Genomic Coordinates Reverse (-)

50608875 .. 50620220

Gene Structure 11346 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG386100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGCGAGGACGAGTTCAAGGTCAGCAGCGACTCAGGGCTGTCGGAGGAGGAAGTCGAGAAGCGCTGGGCGGTGTACGGATGGAACGAACTGGAGAAGCACGAGGATCAGTCGATCCTGAAGCTGCTGATGGATCAGCTCAGCGACACGCTCGTCCGGGTTCTGTTGTTCGCAGCGGTTCTCTCCTTCGTTCTCGCATGCAAGAGAAGATGCAAAGAGAAGCTTTGAAAGCTGAAGCAGCAGATATGAAAAAGATACAGAAAGAAAAGCAAAGGTGGGAGAAAGGGAAATTTGCCTTAAAATCGATTGTGGCTGAGATTGATTGTAAAGTTGTGGAACTGGGGTCATTAGGAGGAAATTTGCTTACAAGGTTTGCTGAAAGAGGGCTATCATACCGTATAAAAGCAAATCCAATTGAAAGATCAATTGTCTGGACCATGACAATTCCAGAACACTTTTCACAGCTTTTTCCTGAAGGAATAGAGATCCAGTATATATTGCTTGTGTATGAGGCAGAAGAATTTTGTAACCTTGTCATCAAGGATTCACTTCTGGAACATATTGCCAGGGTTCGAAGTATTTATCCGTCTTATACAGTTTGTTATCTCATGAATAGGTCTATGGCGATGTATATTAATAATAGGGAACAAGAAGCGTACAAGAACCAAACAAATATTGGACGGACAAACCCAACTGCCAAGGAGGTTGAACTGGTGTTTGCAAAGTTTACCACCAATTTTTTCAAAGTACATTCCAGGCAGTGCAGAGATGAGGTTGAACTTGCTGAACATGTTGTTGGTTTGACATGCAGCCTGTCAACCTGCAAATTTAGAAAGAAGTTAACTAGACTGGATGTAAATGCTAATGGAGCCCTAATCACGAAGGACCGCATTGACCGCGATTTATTAAAGAACAACTTATGGTTAAGAGCTTTGGTAGCTATTCCGAAGGTACAACCGCGATTTGCTAAGGCTATATGGAAGAAGTACCCTACCATGAAATCTCTTTTGAGTGTTTACATGGACCCGATAATATCAGTTCATGAAAAGGAATTTCTGCTCAAGGATTTGACAACAGAAGGCTTACTAGGTGGTGACAGAAAAGTAGGTGAGGTAGGTATCATGGCTAGGGTTTTCGTCCAGTCTACTAATATTCCTAGTGTGGTTGCCGGGCGAAAGCTTGGTCAATTTAAAGGATCTGAAAATTCTAGAAAGGCAACAAAGATGATGTGTACTTTACGAGCACCTGCATTGAGATTGAGCAGTTTCTCAGGACTCCGTAGTGTTAATGCTTTAGATATTATGGTGAAGCCTGGGCAAGACTTATATTCTAAGGTGGGAGAAGCTATCTCCTCCCGGCATCGTAAGGCTAGCAGATGTGTGCCTAAAGCCACGTCGTTTGAGCGCTTCTCAGAAAAGGCAATAAACGCGATTATGCTTGCACAAGAGGAAACAAGGCGAATTGGTCACAACTTTGTTGGTACAGAGCACATACTTTTGGGTCTTGTTGGTGAAGGAACTGGAATTGCTGCCAAGGTCCTTAAATCTATGGGAATCAATCTTAAAGGGGCACGCGTTGAAGTGAAAAAGATCATTGGAACGGGTCGTGGCTTTGTTGCTATTGAAATCCCATTCACTTCTCGTGCAAAGCGAGTTTTGGAACTGTCACAGGAGGAAGCTCGACAACTGGGCCATAACTATATTGGACCTGAGCACTTGCTTTTGGGACTGCTTCGTGAAGGTGAGGGTGTGGCAGCTTGTGTTCTTAAAAATTTAGGTGCTGACTTCAGCAACATTCGCACACAGGTTATTCGTATGGTAGGTGAGAGCACAGAAGCTGTTGGTTTTGGAGCTAGACAAAGAACCAGTGGCAACAAAATGGGCAAAGAAGATATTTTGACTTCATATGTAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009987 GO:0010212 GO:0010332 GO:0016787 GO:0016788 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

ERCC4

Protein Analysis

637

Amino Acids

70.91

Weight (kDa)

9.87

Isoelectric Point (pI)

33.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	114 - 265	2.9e-10	ERCC4 domain
EME1-MUS81_C	PF21292	306 - 369	1.5e-06	EME1/MUS81, C-terminal
Clp_N	PF02861	468 - 590	2.8e-34	Clp repeat (R) N-terminal domain
Clp_N	PF02861	544 - 614	4.5e-17	Clp repeat (R) N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21800 AT2G21800 AT2G21800 AT2G22140 AT2G22140
fragaria_vesca	FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_1g23210 FvH4_5g31350 FvH4_5g31350
malus_domestica	MD15G1335700.v1.1 MD15G1404100.v1.1
prunus_persica	Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.1G550600_v2.0.a1 Prupe.6G166800_v2.0.a1
pyrus_communis	pycom15g28970
rosa_chinensis	RchiOBHm_Chr2g0117911 RchiOBHm_Chr7g0226601 RchiOBHm_Chr7g0226611 RchiOBHm_Chr7g0228631
rosa_laevigata	RLG00000001714 RLG00000018383
rosa_multiflora	Rmu_sc0001423.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126110 Rroxscaffold_3G00230990 Rroxscaffold_3G00232670
rosa_rugosa	Rorug02G0214800 Rorug02G0214900 Rorug02G0214900 Rorug07G0238500 Rorug07G0238600
rosa_samantha	Rh2AG271200 Rh2BG282800 Rh2DG279100 Rh2DG297000 Rh7AG386100 Rh7AG403200 Rh7BG372700 Rh7BG372800 Rh7CG405400 Rh7CG422500 Rh7DG384700
rosa_wichuraiana	Rw2G021450 Rw7G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1252
AasI	GACNNNNNNGTC	1 cut(s)	150
Acc36I	ACCTGC	2 cut(s)	827, 1252
AccI	GTMKAC	1 cut(s)	1142
AccII	CGCG	4 cut(s)	897, 958, 1427, 1572
AciI	CCGC	5 cut(s)	69, 174, 886, 895, 956
AclWI	GGATC	5 cut(s)	107, 112, 139, 478, 1201
AcsI	RAATTY	7 cut(s)	287, 355, 518, 824, 1049, 1201, 1768
AcuI	CTGAAG	4 cut(s)	138, 252, 492, 1768
AfaI	GTAC	7 cut(s)	75, 656, 747, 951, 986, 1231, 1480
AfeI	AGCGCT	2 cut(s)	63, 1403
AflIII	ACRYGT	2 cut(s)	787, 1570
AgsI	TTSAA	8 cut(s)	17, 226, 416, 707, 742, 776, 1577, 1622
AjiI	CACGTC	1 cut(s)	1392
AjnI	CCWGG	3 cut(s)	563, 752, 1309
AjuI	GAANNNNNNNTTGG	2 cut(s)	777, 809
Alw21I	GWGCWC	4 cut(s)	1243, 1488, 1713, 1829
AlwI	GGATC	5 cut(s)	107, 112, 139, 478, 1201
AlwNI	CAGNNNCTG	1 cut(s)	1835
Aor51HI	AGCGCT	2 cut(s)	63, 1403
AoxI	GGCC	1 cut(s)	1687
ApeKI	GCWGC	7 cut(s)	25, 122, 171, 236, 807, 1526, 1751
ApoI	RAATTY	7 cut(s)	287, 355, 518, 824, 1049, 1201, 1768
ArsI	GACNNNNNNTTYG	2 cut(s)	1165, 1197
AseI	ATTAAT	1 cut(s)	633
AspLEI	GCGC	2 cut(s)	64, 1404
AspS9I	GGNCC	6 cut(s)	432, 883, 1021, 1534, 1687, 1703
AsuC2I	CCSGG	3 cut(s)	156, 1168, 1354
AsuHPI	GGTGA	6 cut(s)	1103, 1118, 1315, 1520, 1751, 1832
AsuII	TTCGAA	1 cut(s)	571
AsuNHI	GCTAGC	1 cut(s)	1367
AvaII	GGWCC	5 cut(s)	432, 883, 1021, 1534, 1703
BaeGI	GKGCMC	1 cut(s)	1570
BanII	GRGCYC	1 cut(s)	871
BauI	CACGAG	2 cut(s)	99, 1638
Bbv12I	GWGCWC	4 cut(s)	1243, 1488, 1713, 1829
BbvI	GCAGC	7 cut(s)	37, 109, 183, 248, 819, 1513, 1763
BccI	CCATC	2 cut(s)	73, 122
BciT130I	CCWGG	3 cut(s)	565, 754, 1311
BcnI	CCSGG	3 cut(s)	156, 1168, 1354
BfaI	CTAG	7 cut(s)	843, 1085, 1125, 1155, 1206, 1368, 1851
BfoI	RGCGCY	2 cut(s)	65, 1405
BfuAI	ACCTGC	2 cut(s)	827, 1252
BisI	GCNGC	7 cut(s)	26, 123, 172, 237, 808, 1527, 1752
BlpI	GCTNAGC	1 cut(s)	138
BlsI	GCNGC	7 cut(s)	27, 124, 173, 238, 809, 1528, 1753
Bme1390I	CCNGG	6 cut(s)	156, 565, 754, 1168, 1311, 1354
Bme18I	GGWCC	5 cut(s)	432, 883, 1021, 1534, 1703
BmgBI	CACGTC	1 cut(s)	1392
BmgT120I	GGNCC	6 cut(s)	432, 883, 1021, 1534, 1687, 1703
BmiI	GGNNCC	2 cut(s)	868, 1023
BmrFI	CCNGG	6 cut(s)	156, 565, 754, 1168, 1311, 1354
BmrI	ACTGGG	2 cut(s)	347, 1694
BmsI	GCATC	2 cut(s)	198, 1366
BmtI	GCTAGC	1 cut(s)	1371
BmuI	ACTGGG	2 cut(s)	347, 1694
BplI	GAGNNNNNCTC	2 cut(s)	1391, 1423
BpmI	CTGGAG	1 cut(s)	111
Bpu10I	CCTNAGC	2 cut(s)	966, 1707
Bpu1102I	GCTNAGC	1 cut(s)	138
Bpu14I	TTCGAA	1 cut(s)	571
BpuEI	CTTGAG	1 cut(s)	1043
BpuMI	CCSGG	3 cut(s)	156, 1168, 1354
Bsa29I	ATCGAT	1 cut(s)	302
BsaJI	CCNNGG	4 cut(s)	564, 696, 1310, 1530
Bse1I	ACTGG	9 cut(s)	94, 342, 487, 714, 852, 1138, 1522, 1689, 1863
BseBI	CCWGG	3 cut(s)	565, 754, 1311
BseCI	ATCGAT	1 cut(s)	302
BseDI	CCNNGG	4 cut(s)	564, 696, 1310, 1530
BseGI	GGATG	2 cut(s)	84, 856
BseMII	CTCAG	6 cut(s)	46, 152, 303, 1281, 1422, 1698
BseNI	ACTGG	9 cut(s)	94, 342, 487, 714, 852, 1138, 1522, 1689, 1863
BseRI	GAGGAG	2 cut(s)	60, 1339
BseSI	GKGCMC	1 cut(s)	1570
BseXI	GCAGC	7 cut(s)	37, 109, 183, 248, 819, 1513, 1763
BseYI	CCCAGC	1 cut(s)	64
BsgI	GTGCAG	1 cut(s)	781
Bsh1236I	CGCG	4 cut(s)	897, 958, 1427, 1572
BshFI	GGCC	1 cut(s)	1689
BshVI	ATCGAT	1 cut(s)	302
BsiHKAI	GWGCWC	4 cut(s)	1243, 1488, 1713, 1829
BsiSI	CCGG	3 cut(s)	155, 1167, 1354
BslFI	GGGAC	1 cut(s)	1737
BsmFI	GGGAC	1 cut(s)	1737
BsnI	GGCC	1 cut(s)	1689
Bsp119I	TTCGAA	1 cut(s)	571
Bsp1286I	GDGCHC	6 cut(s)	871, 1243, 1488, 1570, 1713, 1829
Bsp143I	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
Bsp1720I	GCTNAGC	1 cut(s)	138
BspACI	CCGC	5 cut(s)	69, 174, 886, 895, 956
BspANI	GGCC	1 cut(s)	1689
BspCNI	CTCAG	6 cut(s)	45, 151, 304, 1280, 1421, 1699
BspDI	ATCGAT	1 cut(s)	302
BspFNI	CGCG	4 cut(s)	897, 958, 1427, 1572
BspHI	TCATGA	2 cut(s)	606, 1039
BspLI	GGNNCC	2 cut(s)	868, 1023
BspMI	ACCTGC	2 cut(s)	827, 1252
BspOI	GCTAGC	1 cut(s)	1371
BspPI	GGATC	5 cut(s)	107, 112, 139, 478, 1201
BspT104I	TTCGAA	1 cut(s)	571
BsrI	ACTGG	9 cut(s)	94, 342, 487, 714, 852, 1138, 1522, 1689, 1863
BssECI	CCNNGG	4 cut(s)	564, 696, 1310, 1530
BssMI	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
BssSI	CACGAG	2 cut(s)	99, 1638
BssT1I	CCWWGG	2 cut(s)	696, 1530
Bst2BI	CACGAG	2 cut(s)	99, 1638
Bst2UI	CCWGG	3 cut(s)	565, 754, 1311
Bst4CI	ACNGT	3 cut(s)	395, 595, 1662
BstBI	TTCGAA	1 cut(s)	571
BstC8I	GCNNGC	4 cut(s)	197, 1369, 1437, 1570
BstDEI	CTNAG	8 cut(s)	32, 138, 312, 966, 1267, 1329, 1408, 1707
BstF5I	GGATG	2 cut(s)	84, 856
BstFNI	CGCG	4 cut(s)	897, 958, 1427, 1572
BstH2I	RGCGCY	2 cut(s)	65, 1405
BstHHI	GCGC	2 cut(s)	64, 1404
BstKTI	GATC	7 cut(s)	107, 115, 134, 422, 486, 1196, 1590
BstMBI	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
BstMWI	GCNNNNNNNGC	7 cut(s)	227, 236, 866, 894, 935, 1424, 1794
BstNI	CCWGG	3 cut(s)	565, 754, 1311
BstNSI	RCATGY	3 cut(s)	199, 791, 807
BstSCI	CCNGG	6 cut(s)	154, 563, 752, 1166, 1309, 1352
BstSLI	GKGCMC	1 cut(s)	1570
BstUI	CGCG	4 cut(s)	897, 958, 1427, 1572
BstV1I	GCAGC	7 cut(s)	37, 109, 183, 248, 819, 1513, 1763
BstX2I	RGATCY	2 cut(s)	483, 1193
BstYI	RGATCY	2 cut(s)	483, 1193
Bsu15I	ATCGAT	1 cut(s)	302
BsuRI	GGCC	1 cut(s)	1689
BsuTUI	ATCGAT	1 cut(s)	302
BtgZI	GCGATG	1 cut(s)	638
BtrI	CACGTC	1 cut(s)	1392
BtsCI	GGATG	2 cut(s)	84, 856
BtsI	GCAGTG	1 cut(s)	764
BtsIMutI	CAGTG	2 cut(s)	764, 1870
BveI	ACCTGC	2 cut(s)	827, 1252
Cac8I	GCNNGC	4 cut(s)	197, 1369, 1437, 1570
CaiI	CAGNNNCTG	1 cut(s)	1835
CciI	TCATGA	2 cut(s)	606, 1039
CfoI	GCGC	2 cut(s)	64, 1404
Cfr13I	GGNCC	6 cut(s)	432, 883, 1021, 1534, 1687, 1703
ClaI	ATCGAT	1 cut(s)	302
Csp6I	GTAC	7 cut(s)	74, 655, 746, 950, 985, 1230, 1479
CspCI	CAANNNNNGTGG	2 cut(s)	1378, 1413
CviAII	CATG	9 cut(s)	196, 436, 607, 788, 804, 994, 1018, 1040, 1120
CviQI	GTAC	7 cut(s)	74, 655, 746, 950, 985, 1230, 1479
DdeI	CTNAG	8 cut(s)	32, 138, 312, 966, 1267, 1329, 1408, 1707
DpnI	GATC	7 cut(s)	106, 114, 133, 421, 485, 1195, 1589
DpnII	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
DraI	TTTAAA	1 cut(s)	1189
DrdI	GACNNNNNNGTC	1 cut(s)	150
DseDI	GACNNNNNNGTC	1 cut(s)	150
Eco130I	CCWWGG	2 cut(s)	696, 1530
Eco24I	GRGCYC	1 cut(s)	871
Eco47I	GGWCC	5 cut(s)	432, 883, 1021, 1534, 1703
Eco47III	AGCGCT	2 cut(s)	63, 1403
Eco57I	CTGAAG	4 cut(s)	138, 252, 492, 1768
EcoO109I	RGGNCCY	1 cut(s)	1534
EcoRII	CCWGG	3 cut(s)	563, 752, 1309
EcoT14I	CCWWGG	2 cut(s)	696, 1530
EcoT38I	GRGCYC	1 cut(s)	871
ErhI	CCWWGG	2 cut(s)	696, 1530
FaeI	CATG	9 cut(s)	199, 439, 610, 791, 807, 997, 1021, 1043, 1123
FalI	AAGNNNNNCTT	4 cut(s)	205, 237, 899, 931
FaqI	GGGAC	1 cut(s)	1737
FatI	CATG	9 cut(s)	195, 435, 606, 787, 803, 993, 1017, 1039, 1119
FauNDI	CATATG	1 cut(s)	1903
FblI	GTMKAC	1 cut(s)	1142
Fnu4HI	GCNGC	7 cut(s)	26, 123, 172, 237, 808, 1527, 1752
FokI	GGATG	2 cut(s)	91, 863
FriOI	GRGCYC	1 cut(s)	871
Fsp4HI	GCNGC	7 cut(s)	26, 123, 172, 237, 808, 1527, 1752
FspBI	CTAG	7 cut(s)	843, 1085, 1125, 1155, 1206, 1368, 1851
GlaI	GCGC	2 cut(s)	63, 1403
GluI	GCNGC	7 cut(s)	26, 123, 172, 237, 808, 1527, 1752
GsaI	CCCAGC	1 cut(s)	68
GsuI	CTGGAG	1 cut(s)	111
HaeII	RGCGCY	2 cut(s)	65, 1405
HaeIII	GGCC	1 cut(s)	1689
HapII	CCGG	3 cut(s)	155, 1167, 1354
HhaI	GCGC	2 cut(s)	64, 1404
Hin1II	CATG	9 cut(s)	199, 439, 610, 791, 807, 997, 1021, 1043, 1123
Hin6I	GCGC	2 cut(s)	62, 1402
HinP1I	GCGC	2 cut(s)	62, 1402
HincII	GTYRAC	2 cut(s)	816, 840
HindII	GTYRAC	2 cut(s)	816, 840
HindIII	AAGCTT	2 cut(s)	219, 1175
HinfI	GANTC	4 cut(s)	30, 542, 1272, 1551
HpaI	GTTAAC	1 cut(s)	840
HpaII	CCGG	3 cut(s)	155, 1167, 1354
HphI	GGTGA	6 cut(s)	1103, 1118, 1315, 1520, 1751, 1832
Hpy166II	GTNNAC	7 cut(s)	74, 726, 816, 840, 1015, 1143, 1230
Hpy188I	TCNGA	4 cut(s)	44, 945, 1198, 1411
Hpy8I	GTNNAC	7 cut(s)	74, 726, 816, 840, 1015, 1143, 1230
Hpy99I	CGWCG	1 cut(s)	1396
HpyAV	CCTTC	7 cut(s)	194, 467, 874, 940, 1070, 1505, 1730
HpyCH4III	ACNGT	3 cut(s)	395, 595, 1662
HpyCH4IV	ACGT	1 cut(s)	1391
HpyCH4V	TGCA	9 cut(s)	199, 211, 719, 762, 807, 822, 1247, 1439, 1643
HpyF10VI	GCNNNNNNNGC	7 cut(s)	227, 236, 866, 894, 935, 1424, 1794
HpyF3I	CTNAG	8 cut(s)	32, 138, 312, 966, 1267, 1329, 1408, 1707
HpySE526I	ACGT	1 cut(s)	1391
Hsp92II	CATG	9 cut(s)	199, 439, 610, 791, 807, 997, 1021, 1043, 1123
HspAI	GCGC	2 cut(s)	62, 1402
KspAI	GTTAAC	1 cut(s)	840
Kzo9I	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
LmnI	GCTCC	2 cut(s)	866, 1847
Lsp1109I	GCAGC	7 cut(s)	37, 109, 183, 248, 819, 1513, 1763
LweI	GCATC	2 cut(s)	198, 1366
MaeI	CTAG	7 cut(s)	843, 1085, 1125, 1155, 1206, 1368, 1851
MaeII	ACGT	1 cut(s)	1391
MaeIII	GTNAC	4 cut(s)	524, 1091, 1463, 1662
MalI	GATC	7 cut(s)	106, 114, 133, 421, 485, 1195, 1589
MboI	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
MboII	GAAGA	4 cut(s)	217, 527, 991, 1898
MfeI	CAATTG	2 cut(s)	411, 423
MflI	RGATCY	2 cut(s)	483, 1193
MhlI	GDGCHC	6 cut(s)	871, 1243, 1488, 1570, 1713, 1829
MluI	ACGCGT	1 cut(s)	1570
MlyI	GAGTC	2 cut(s)	24, 1266
MmeI	TCCRAC	1 cut(s)	22
MspA1I	CMGCKG	1 cut(s)	174
MspI	CCGG	3 cut(s)	155, 1167, 1354
MspR9I	CCNGG	6 cut(s)	156, 565, 754, 1168, 1311, 1354
MunI	CAATTG	2 cut(s)	411, 423
MvaI	CCWGG	3 cut(s)	565, 754, 1311
MvnI	CGCG	4 cut(s)	897, 958, 1427, 1572
MwoI	GCNNNNNNNGC	7 cut(s)	227, 236, 866, 894, 935, 1424, 1794
NciI	CCSGG	3 cut(s)	156, 1168, 1354
NdeI	CATATG	1 cut(s)	1903
NdeII	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
NheI	GCTAGC	1 cut(s)	1367
NlaIII	CATG	9 cut(s)	199, 439, 610, 791, 807, 997, 1021, 1043, 1123
NlaIV	GGNNCC	2 cut(s)	868, 1023
NmuCI	GTSAC	3 cut(s)	1091, 1463, 1662
NspI	RCATGY	3 cut(s)	199, 791, 807
NspV	TTCGAA	1 cut(s)	571
PaeI	GCATGC	1 cut(s)	199
PagI	TCATGA	2 cut(s)	606, 1039
PaqCI	CACCTGC	1 cut(s)	1252
PciI	ACATGT	1 cut(s)	787
PcsI	WCGNNNNNNNCGW	2 cut(s)	82, 1645
PfeI	GAWTC	2 cut(s)	542, 1551
PkrI	GCNGC	7 cut(s)	27, 124, 173, 238, 809, 1528, 1753
PleI	GAGTC	2 cut(s)	24, 1266
PpsI	GAGTC	2 cut(s)	24, 1266
PpuMI	RGGWCCY	1 cut(s)	1534
PscI	ACATGT	1 cut(s)	787
PshBI	ATTAAT	1 cut(s)	633
Psp5II	RGGWCCY	1 cut(s)	1534
Psp6I	CCWGG	3 cut(s)	563, 752, 1309
PspFI	CCCAGC	1 cut(s)	64
PspGI	CCWGG	3 cut(s)	563, 752, 1309
PspN4I	GGNNCC	2 cut(s)	868, 1023
PspPI	GGNCC	6 cut(s)	432, 883, 1021, 1534, 1687, 1703
PspPPI	RGGWCCY	1 cut(s)	1534
PstNI	CAGNNNCTG	1 cut(s)	1835
PsuI	RGATCY	2 cut(s)	483, 1193
RsaI	GTAC	7 cut(s)	75, 656, 747, 951, 986, 1231, 1480
RsaNI	GTAC	7 cut(s)	74, 655, 746, 950, 985, 1230, 1479
SatI	GCNGC	7 cut(s)	26, 123, 172, 237, 808, 1527, 1752
Sau3AI	GATC	7 cut(s)	104, 112, 131, 419, 483, 1193, 1587
Sau96I	GGNCC	6 cut(s)	432, 883, 1021, 1534, 1687, 1703
SchI	GAGTC	2 cut(s)	24, 1266
ScrFI	CCNGG	6 cut(s)	156, 565, 754, 1168, 1311, 1354
SduI	GDGCHC	6 cut(s)	871, 1243, 1488, 1570, 1713, 1829
SfaNI	GCATC	2 cut(s)	198, 1366
SfuI	TTCGAA	1 cut(s)	571
SinI	GGWCC	5 cut(s)	432, 883, 1021, 1534, 1703
SmlI	CTYRAG	1 cut(s)	1058
SmoI	CTYRAG	1 cut(s)	1058
SphI	GCATGC	1 cut(s)	199
SsiI	CCGC	5 cut(s)	69, 174, 886, 895, 956
SspI	AATATT	2 cut(s)	673, 1150
SspMI	CTAG	7 cut(s)	843, 1085, 1125, 1155, 1206, 1368, 1851
StyD4I	CCNGG	6 cut(s)	154, 563, 752, 1166, 1309, 1352
StyI	CCWWGG	2 cut(s)	696, 1530
TaaI	ACNGT	3 cut(s)	395, 595, 1662
TaiI	ACGT	1 cut(s)	1394
TaqI	TCGA	5 cut(s)	55, 111, 302, 571, 1678
TatI	WGTACW	2 cut(s)	745, 1229
TfiI	GAWTC	2 cut(s)	542, 1551
TscAI	CASTG	2 cut(s)	764, 1870
TseFI	GTSAC	3 cut(s)	1091, 1463, 1662
TseI	GCWGC	7 cut(s)	25, 122, 171, 236, 807, 1526, 1751
Tsp45I	GTSAC	3 cut(s)	1091, 1463, 1662
TspDTI	ATGAA	6 cut(s)	260, 623, 1010, 1028, 1056, 1890
TspGWI	ACGGA	4 cut(s)	91, 573, 694, 1265
TspRI	CASTG	2 cut(s)	764, 1870
VpaK11BI	GGWCC	5 cut(s)	432, 883, 1021, 1534, 1703
VspI	ATTAAT	1 cut(s)	633
XapI	RAATTY	7 cut(s)	287, 355, 518, 824, 1049, 1201, 1768
XbaI	TCTAGA	1 cut(s)	1205
XceI	RCATGY	3 cut(s)	199, 791, 807
XcmI	CCANNNNNNNNNTGG	2 cut(s)	671, 1697
XmiI	GTMKAC	1 cut(s)	1142
XspI	CTAG	7 cut(s)	843, 1085, 1125, 1155, 1206, 1368, 1851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.