Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0013203

Physical Location & Seq

Genomic Coordinates Forward (+)

74700705 .. 74704415

Gene Structure 3711 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00137000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGTCAACGGCGGACCAAAACGACGACGAATCTGACCACCGTTTTGAGACCGTCGATGGTCGCGACTACACCTTAGATCTCCCCGACGAGTGCTTGGGGATCATTTTCCATTTCCTCGGCTCCGGCGACCGGAAGCGTAGCTCGGTTGTCTGCAAGCGGTGGCTCCACGTCGACGGCGAGCACCGCCACCGTCTCTCTCTGAACGCCCAGGCCGGAATCTTGCCTTTCATTCCTTGTATATTTACTCGATTCGATTCCGTCTCGAAGCTCGCGCTTCGATGTGACCGGAAATCGACTAGCATAGACGACGATGCCCTGGTCCTGATCTCCGTTCGCTGCAAGAGCCTCACGCGCCTCAAGCTCCGCGGCTGCCGGGAAATCACCGACCTCGGAATGGCGGCGTTCGCTCAGAATTCTACTGGATTGAAGAAGCTCTCCGTCGGGTCGTGCATGTTCGGCGCCAAGGCCATGAACGCCGTGCTCGAGTACTGCACGGCGCTCGAGGAGCTATCGGTGAAGCGGCTCCGGGGGATCCACGACGCCTCGGAGCAGATCGGAGCCGGCAAAACGCCGTCGACGCTGAAATCGATCTGCCTGAAGGAGATACTGAATGGCCAGTGCTTTGGACCGCTGATTGTAAGCTCGAAAAACCTTAAGACTTTGAAATTGTTTAGATGTTTGGGAGATTGGGATAGGGTTTTGGAAATGCTTGGAAATGGGAACAGGGGCTTGACTGAAATTCATCTTGAGAGGATTCAAGTGACCGATCTGGGGCTTTCGGCGATTGCCAAATGCTCGAATTTGGAGGTCTTGCACATTGTTAAGGCCCCCGAGTGTTCGAATTTCGGGCTTATTTGTGTTGCTGAACATTGCAAGTTACTGAGGAAGCTTCACATTGATGGATGGAGGACTAATAGAATTGGGGATGAGGGTTTGATTGCTGTAGCTAAAGATTGCCCTGACATTCAAGAGCTTGTGTTGATCGGTGTTAATCCTACTTCTTTGAGCTTGACTGCAATCGCTTCCAATTGCAAAAAATTGGAGAGGTTGGCTCTTTGCGGCAGTGGAACAATTGGAGATGCTGAATTCACTTGTATTGCTGCCAAATGTGTAGCATTGAAGAAGCTGTGTATTAAGGGGTGCCCGATTTCGAATGTTGGACTCGAAACGCTTGCTTGGGGCTGCCCCAATTTGGCCAAGATTAAGGTCAAGAAGTGCAAAGGTGTGAGTGGTGAGGTTGCAGAATGGTTGCGGGAAAGGAGAGGATCATTGACTGTTAATTGGGAATCTGGAGAAATTGTACCTTTGGATGCTGGTGGTGGTTTGAGTGGAGGTGTAGAAAGCTCCATGGAGTTTCCGCTTGATCATGTAGCTGTTGCCATCGCGCCATCAAGTAGCAATAATCCATTGACATTGTTTAGAACAAAGTTCGGGTTTTTTTCAGGTAGGAGTTTTGTTCCTTGCACATTCAGAAGGTGGTCAGTTAGCGAGAATACTTCCAATGGAAATTTGATTGTTAGCTCAGTTCAGGGTGCATTGTTCCTAATGCTACTTGCGCGTGGCAAGTTGCACAATTCGTTGCTAGATCTGGCCACAGATCCAAGAGTTCTGTACCTCCTTTCTTCAGGGAAATCCATTTCACCAGAACTTCTGAAAGCTATCGAAGAGTCCAAGTTTGCGGTTACAGTTCTTTCAACCAACTATGCTACTTCAACTTGGTGTCTGGATGAACTTGCCCATATTCTCGATTGCAGGAAAGTAAGGGGACTGGAAGTTCTTCCGGTTTTTTATCATGTAGAACCATCTGAGATAAGGAAGCAAACTGGAAACTACGGCAAGGCGTTTGCTAAGCATGAGACAAATTTCAAGGAAAATATGAGAAAGGTGGACAAGTGGAGGAAAGCTTTAGAATATATAGCCAGTCTCTCCGGATGGCATGTGACACAGGATAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like LRR_6

Protein Analysis

651

Amino Acids

71.55

Weight (kDa)

8.68

Isoelectric Point (pI)

31.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	541 - 647	3.6e-35	TIR domain
TIR_2	PF13676	541 - 601	9.1e-08	TIR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67250
fragaria_vesca	FvH4_1g16660
malus_domestica	MD02G1178100.v1.1 MD15G1288000.v1.1
prunus_persica	Prupe.6G229800_v2.0.a1
pyrus_communis	pycom02g14380 pycom02g14420 pycom15g25150
rosa_chinensis	RchiOBHm_Chr2g0106581
rosa_laevigata	RLG00000017518
rosa_multiflora	Rmu_ssc0000135.1_g000051
rosa_roxburghii	Rroxscaffold_2G00137000
rosa_rugosa	Rorug02G0136500
rosa_samantha	Rh2AG187700 Rh2BG198700 Rh2CG192700 Rh2DG193900
rosa_wichuraiana	Rw2G014730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	458, 1140
AccI	GTMKAC	2 cut(s)	171, 575
AccII	CGCG	6 cut(s)	63, 272, 352, 366, 1385, 1558
AccIII	TCCGGA	1 cut(s)	1928
AclWI	GGATC	5 cut(s)	107, 526, 539, 1273, 1592
AcoI	YGGCCR	3 cut(s)	613, 1194, 1590
AcsI	RAATTY	7 cut(s)	412, 738, 799, 841, 1085, 1507, 1861
AcuI	CTGAAG	2 cut(s)	617, 1608
AcyI	GRCGYC	2 cut(s)	459, 540
AfaI	GTAC	3 cut(s)	488, 1302, 1613
AfiI	CCNNNNNNNGG	4 cut(s)	129, 394, 771, 1192
AflII	CTTAAG	1 cut(s)	653
AgsI	TTSAA	8 cut(s)	427, 664, 758, 968, 1120, 1695, 1713, 1867
AjiI	CACGTC	1 cut(s)	169
AjnI	CCWGG	2 cut(s)	207, 315
AloI	GAACNNNNNNTCC	2 cut(s)	1758, 1790
Alw21I	GWGCWC	2 cut(s)	183, 483
Alw26I	GTCTC	5 cut(s)	41, 197, 265, 1850, 1928
AlwI	GGATC	5 cut(s)	107, 526, 539, 1273, 1592
Ama87I	CYCGRG	3 cut(s)	482, 500, 830
Aor13HI	TCCGGA	1 cut(s)	1928
AoxI	GGCC	6 cut(s)	210, 465, 613, 825, 1194, 1590
ApeKI	GCWGC	4 cut(s)	336, 369, 1100, 1182
ApoI	RAATTY	7 cut(s)	412, 738, 799, 841, 1085, 1507, 1861
ArsI	GACNNNNNNTTYG	2 cut(s)	26, 58
Asp700I	GAANNNNTTC	1 cut(s)	1776
AspLEI	GCGC	6 cut(s)	274, 354, 461, 499, 1387, 1558
AspS9I	GGNCC	4 cut(s)	13, 319, 626, 826
AsuC2I	CCSGG	2 cut(s)	374, 527
AsuHPI	GGTGA	4 cut(s)	373, 526, 1244, 1632
AsuII	TTCGAA	2 cut(s)	839, 1151
AvaI	CYCGRG	3 cut(s)	482, 500, 830
AvaII	GGWCC	3 cut(s)	13, 319, 626
BaeGI	GKGCMC	1 cut(s)	1145
BalI	TGGCCA	3 cut(s)	615, 1196, 1592
BamHI	GGATCC	1 cut(s)	531
BanI	GGYRCC	2 cut(s)	458, 1140
Bbv12I	GWGCWC	2 cut(s)	183, 483
BbvI	GCAGC	4 cut(s)	323, 356, 1087, 1169
BccI	CCATC	7 cut(s)	50, 893, 897, 1388, 1396, 1810, 1926
BceAI	ACGGC	6 cut(s)	24, 190, 461, 510, 556, 1849
BcgI	CGANNNNNNTGC	4 cut(s)	481, 515, 1154, 1188
BciT130I	CCWGG	2 cut(s)	209, 317
BclI	TGATCA	1 cut(s)	1363
BcnI	CCSGG	2 cut(s)	374, 527
BcoDI	GTCTC	5 cut(s)	41, 197, 265, 1850, 1928
BfaI	CTAG	2 cut(s)	297, 1583
BfmI	CTRYAG	1 cut(s)	942
BfoI	RGCGCY	2 cut(s)	462, 500
BfrI	CTTAAG	1 cut(s)	653
BglII	AGATCT	2 cut(s)	76, 1585
BisI	GCNGC	8 cut(s)	337, 367, 370, 399, 521, 1060, 1101, 1183
BlpI	GCTNAGC	1 cut(s)	1848
BlsI	GCNGC	8 cut(s)	338, 368, 371, 400, 522, 1061, 1102, 1184
BmcAI	AGTACT	1 cut(s)	488
Bme1390I	CCNGG	4 cut(s)	209, 317, 374, 527
Bme18I	GGWCC	3 cut(s)	13, 319, 626
BmeT110I	CYCGRG	3 cut(s)	482, 500, 830
BmgBI	CACGTC	1 cut(s)	169
BmgT120I	GGNCC	4 cut(s)	13, 319, 626, 826
BmiI	GGNNCC	8 cut(s)	121, 164, 460, 524, 533, 559, 828, 1142
BmrFI	CCNGG	4 cut(s)	209, 317, 374, 527
BmsI	GCATC	3 cut(s)	301, 1069, 1300
BplI	GAGNNNNNCTC	2 cut(s)	1036, 1068
BpmI	CTGGAG	1 cut(s)	1311
Bpu1102I	GCTNAGC	1 cut(s)	1848
Bpu14I	TTCGAA	2 cut(s)	839, 1151
BpuEI	CTTGAG	2 cut(s)	341, 767
BpuMI	CCSGG	2 cut(s)	374, 527
Bsa29I	ATCGAT	1 cut(s)	587
BsaHI	GRCGYC	2 cut(s)	459, 540
BsaI	GGTCTC	1 cut(s)	41
BsaJI	CCNNGG	9 cut(s)	115, 207, 315, 364, 388, 462, 526, 543, 1347
BsaWI	WCCGGW	4 cut(s)	129, 285, 1780, 1928
BsaXI	ACNNNNNCTCC	2 cut(s)	1284, 1314
Bsc4I	CCNNNNNNNGG	4 cut(s)	129, 394, 771, 1192
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	5 cut(s)	424, 616, 1773, 1828, 1920
Bse3DI	GCAATG	1 cut(s)	868
BseAI	TCCGGA	1 cut(s)	1928
BseBI	CCWGG	2 cut(s)	209, 317
BseCI	ATCGAT	1 cut(s)	587
BseDI	CCNNGG	9 cut(s)	115, 207, 315, 364, 388, 462, 526, 543, 1347
BseGI	GGATG	5 cut(s)	908, 931, 1315, 1732, 1937
BseLI	CCNNNNNNNGG	4 cut(s)	129, 394, 771, 1192
BseMI	GCAATG	1 cut(s)	868
BseMII	CTCAG	4 cut(s)	422, 872, 1536, 1797
BseNI	ACTGG	5 cut(s)	424, 616, 1773, 1828, 1920
BseRI	GAGGAG	1 cut(s)	518
BseSI	GKGCMC	1 cut(s)	1145
BseXI	GCAGC	4 cut(s)	323, 356, 1087, 1169
BsgI	GTGCAG	1 cut(s)	475
Bsh1236I	CGCG	6 cut(s)	63, 272, 352, 366, 1385, 1558
Bsh1285I	CGRYCG	1 cut(s)	130
BshFI	GGCC	6 cut(s)	212, 467, 615, 827, 1196, 1592
BshNI	GGYRCC	2 cut(s)	458, 1140
BshVI	ATCGAT	1 cut(s)	587
BsiEI	CGRYCG	1 cut(s)	130
BsiHKAI	GWGCWC	2 cut(s)	183, 483
BsiHKCI	CYCGRG	3 cut(s)	482, 500, 830
BsiSI	CCGG	9 cut(s)	123, 130, 213, 286, 373, 526, 561, 1781, 1929
BslFI	GGGAC	1 cut(s)	1779
BslI	CCNNNNNNNGG	4 cut(s)	129, 394, 771, 1192
BsmAI	GTCTC	5 cut(s)	41, 197, 265, 1850, 1928
BsmBI	CGTCTC	2 cut(s)	197, 265
BsmFI	GGGAC	1 cut(s)	1779
BsnI	GGCC	6 cut(s)	212, 467, 615, 827, 1196, 1592
Bso31I	GGTCTC	1 cut(s)	41
BsoBI	CYCGRG	3 cut(s)	482, 500, 830
Bsp119I	TTCGAA	2 cut(s)	839, 1151
Bsp1286I	GDGCHC	3 cut(s)	183, 483, 1145
Bsp13I	TCCGGA	1 cut(s)	1928
Bsp1720I	GCTNAGC	1 cut(s)	1848
Bsp19I	CCATGG	1 cut(s)	1347
Bsp68I	TCGCGA	1 cut(s)	63
BspANI	GGCC	6 cut(s)	212, 467, 615, 827, 1196, 1592
BspCNI	CTCAG	4 cut(s)	421, 873, 1535, 1798
BspDI	ATCGAT	1 cut(s)	587
BspEI	TCCGGA	1 cut(s)	1928
BspFNI	CGCG	6 cut(s)	63, 272, 352, 366, 1385, 1558
BspLI	GGNNCC	8 cut(s)	121, 164, 460, 524, 533, 559, 828, 1142
BspPI	GGATC	5 cut(s)	107, 526, 539, 1273, 1592
BspT104I	TTCGAA	2 cut(s)	839, 1151
BspT107I	GGYRCC	2 cut(s)	458, 1140
BspTI	CTTAAG	1 cut(s)	653
BspTNI	GGTCTC	1 cut(s)	41
BsrDI	GCAATG	1 cut(s)	868
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	5 cut(s)	424, 616, 1773, 1828, 1920
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	9 cut(s)	115, 207, 315, 364, 388, 462, 526, 543, 1347
BssNI	GRCGYC	2 cut(s)	459, 540
BssT1I	CCWWGG	2 cut(s)	462, 1347
Bst2UI	CCWGG	2 cut(s)	209, 317
Bst4CI	ACNGT	5 cut(s)	41, 52, 191, 1276, 1687
Bst6I	CTCTTC	1 cut(s)	1659
BstACI	GRCGYC	2 cut(s)	459, 540
BstAFI	CTTAAG	1 cut(s)	653
BstBI	TTCGAA	2 cut(s)	839, 1151
BstC8I	GCNNGC	5 cut(s)	155, 179, 270, 562, 1173
BstDEI	CTNAG	6 cut(s)	73, 408, 881, 1522, 1806, 1848
BstDSI	CCRYGG	2 cut(s)	364, 1347
BstF5I	GGATG	5 cut(s)	908, 931, 1315, 1732, 1937
BstFNI	CGCG	6 cut(s)	63, 272, 352, 366, 1385, 1558
BstH2I	RGCGCY	2 cut(s)	462, 500
BstHHI	GCGC	6 cut(s)	274, 354, 461, 499, 1387, 1558
BstMAI	GTCTC	5 cut(s)	41, 197, 265, 1850, 1928
BstMCI	CGRYCG	1 cut(s)	130
BstNI	CCWGG	2 cut(s)	209, 317
BstNSI	RCATGY	2 cut(s)	454, 1940
BstSCI	CCNGG	4 cut(s)	207, 315, 372, 525
BstSFI	CTRYAG	1 cut(s)	942
BstSLI	GKGCMC	1 cut(s)	1145
BstUI	CGCG	6 cut(s)	63, 272, 352, 366, 1385, 1558
BstV1I	GCAGC	4 cut(s)	323, 356, 1087, 1169
BstX2I	RGATCY	4 cut(s)	76, 531, 1585, 1597
BstXI	CCANNNNNNTGG	1 cut(s)	623
BstYI	RGATCY	4 cut(s)	76, 531, 1585, 1597
Bsu15I	ATCGAT	1 cut(s)	587
BsuRI	GGCC	6 cut(s)	212, 467, 615, 827, 1196, 1592
BsuTUI	ATCGAT	1 cut(s)	587
BtgI	CCRYGG	2 cut(s)	364, 1347
BtgZI	GCGATG	1 cut(s)	1366
BtrI	CACGTC	1 cut(s)	169
BtsCI	GGATG	5 cut(s)	908, 931, 1315, 1732, 1937
BtsI	GCAGTG	1 cut(s)	1069
BtsIMutI	CAGTG	2 cut(s)	623, 1069
BtuMI	TCGCGA	1 cut(s)	63
Cac8I	GCNNGC	5 cut(s)	155, 179, 270, 562, 1173
CfoI	GCGC	6 cut(s)	274, 354, 461, 499, 1387, 1558
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	4 cut(s)	13, 319, 626, 826
Cfr42I	CCGCGG	1 cut(s)	367
ClaI	ATCGAT	1 cut(s)	587
CseI	GACGC	2 cut(s)	548, 586
Csp6I	GTAC	3 cut(s)	487, 1301, 1612
CviAII	CATG	7 cut(s)	451, 469, 1348, 1367, 1793, 1853, 1937
CviQI	GTAC	3 cut(s)	487, 1301, 1612
DdeI	CTNAG	6 cut(s)	73, 408, 881, 1522, 1806, 1848
DinI	GGCGCC	1 cut(s)	460
EaeI	YGGCCR	3 cut(s)	613, 1194, 1590
Eam1104I	CTCTTC	1 cut(s)	1659
EarI	CTCTTC	1 cut(s)	1659
EciI	GGCGGA	1 cut(s)	26
Eco130I	CCWWGG	2 cut(s)	462, 1347
Eco31I	GGTCTC	1 cut(s)	41
Eco47I	GGWCC	3 cut(s)	13, 319, 626
Eco57I	CTGAAG	2 cut(s)	617, 1608
Eco88I	CYCGRG	3 cut(s)	482, 500, 830
EcoO109I	RGGNCCY	1 cut(s)	826
EcoRI	GAATTC	2 cut(s)	412, 1085
EcoRII	CCWGG	2 cut(s)	207, 315
EcoT14I	CCWWGG	2 cut(s)	462, 1347
EgeI	GGCGCC	1 cut(s)	460
EheI	GGCGCC	1 cut(s)	460
ErhI	CCWWGG	2 cut(s)	462, 1347
Esp3I	CGTCTC	2 cut(s)	197, 265
FaeI	CATG	7 cut(s)	454, 472, 1351, 1370, 1796, 1856, 1940
FaqI	GGGAC	1 cut(s)	1779
FatI	CATG	7 cut(s)	450, 468, 1347, 1366, 1792, 1852, 1936
FauI	CCCGC	1 cut(s)	1245
FbaI	TGATCA	1 cut(s)	1363
FblI	GTMKAC	2 cut(s)	171, 575
Fnu4HI	GCNGC	8 cut(s)	337, 367, 370, 399, 521, 1060, 1101, 1183
FokI	GGATG	5 cut(s)	915, 938, 1322, 1739, 1944
Fsp4HI	GCNGC	8 cut(s)	337, 367, 370, 399, 521, 1060, 1101, 1183
FspBI	CTAG	2 cut(s)	297, 1583
GlaI	GCGC	6 cut(s)	273, 353, 460, 498, 1386, 1557
GluI	GCNGC	8 cut(s)	337, 367, 370, 399, 521, 1060, 1101, 1183
GsuI	CTGGAG	1 cut(s)	1311
HaeII	RGCGCY	2 cut(s)	462, 500
HaeIII	GGCC	6 cut(s)	212, 467, 615, 827, 1196, 1592
HapII	CCGG	9 cut(s)	123, 130, 213, 286, 373, 526, 561, 1781, 1929
HgaI	GACGC	2 cut(s)	548, 586
HhaI	GCGC	6 cut(s)	274, 354, 461, 499, 1387, 1558
Hin1I	GRCGYC	2 cut(s)	459, 540
Hin1II	CATG	7 cut(s)	454, 472, 1351, 1370, 1796, 1856, 1940
Hin6I	GCGC	6 cut(s)	272, 352, 459, 497, 1385, 1556
HinP1I	GCGC	6 cut(s)	272, 352, 459, 497, 1385, 1556
HincII	GTYRAC	3 cut(s)	6, 172, 576
HindII	GTYRAC	3 cut(s)	6, 172, 576
HindIII	AAGCTT	2 cut(s)	887, 1902
HinfI	GANTC	8 cut(s)	29, 216, 249, 254, 754, 1161, 1286, 1667
HpaII	CCGG	9 cut(s)	123, 130, 213, 286, 373, 526, 561, 1781, 1929
HphI	GGTGA	4 cut(s)	373, 526, 1244, 1632
Hpy166II	GTNNAC	4 cut(s)	6, 172, 576, 1888
Hpy188I	TCNGA	9 cut(s)	34, 201, 392, 411, 547, 557, 1472, 1653, 1807
Hpy8I	GTNNAC	4 cut(s)	6, 172, 576, 1888
HpyAV	CCTTC	2 cut(s)	592, 1467
HpyCH4III	ACNGT	5 cut(s)	41, 52, 191, 1276, 1687
HpyCH4IV	ACGT	1 cut(s)	168
HpyF3I	CTNAG	6 cut(s)	73, 408, 881, 1522, 1806, 1848
HpySE526I	ACGT	1 cut(s)	168
Hsp92I	GRCGYC	2 cut(s)	459, 540
Hsp92II	CATG	7 cut(s)	454, 472, 1351, 1370, 1796, 1856, 1940
HspAI	GCGC	6 cut(s)	272, 352, 459, 497, 1385, 1556
KasI	GGCGCC	1 cut(s)	458
Kpn2I	TCCGGA	1 cut(s)	1928
KroI	GCCGGC	1 cut(s)	560
KroNI	GCCGGC	1 cut(s)	562
Ksp22I	TGATCA	1 cut(s)	1363
KspI	CCGCGG	1 cut(s)	367
LmnI	GCTCC	8 cut(s)	125, 168, 366, 505, 528, 547, 557, 1349
Lsp1109I	GCAGC	4 cut(s)	323, 356, 1087, 1169
LweI	GCATC	3 cut(s)	301, 1069, 1300
MaeI	CTAG	2 cut(s)	297, 1583
MaeII	ACGT	1 cut(s)	168
MaeIII	GTNAC	5 cut(s)	281, 760, 876, 1681, 1939
MboII	GAAGA	5 cut(s)	439, 1132, 1614, 1676, 1769
MfeI	CAATTG	2 cut(s)	1027, 1071
MflI	RGATCY	4 cut(s)	76, 531, 1585, 1597
MhlI	GDGCHC	3 cut(s)	183, 483, 1145
MlsI	TGGCCA	3 cut(s)	615, 1196, 1592
MluNI	TGGCCA	3 cut(s)	615, 1196, 1592
Mly113I	GGCGCC	1 cut(s)	459
MlyI	GAGTC	2 cut(s)	1155, 1676
MmeI	TCCRAC	1 cut(s)	1138
Mox20I	TGGCCA	3 cut(s)	615, 1196, 1592
MroI	TCCGGA	1 cut(s)	1928
MroNI	GCCGGC	1 cut(s)	560
MroXI	GAANNNNTTC	1 cut(s)	1776
MscI	TGGCCA	3 cut(s)	615, 1196, 1592
MseI	TTAA	6 cut(s)	654, 822, 990, 1134, 1203, 1278
MslI	CAYNNNNRTG	1 cut(s)	897
Msp20I	TGGCCA	3 cut(s)	615, 1196, 1592
MspA1I	CMGCKG	2 cut(s)	366, 631
MspCI	CTTAAG	1 cut(s)	653
MspI	CCGG	9 cut(s)	123, 130, 213, 286, 373, 526, 561, 1781, 1929
MspR9I	CCNGG	4 cut(s)	209, 317, 374, 527
MunI	CAATTG	2 cut(s)	1027, 1071
MvaI	CCWGG	2 cut(s)	209, 317
MvnI	CGCG	6 cut(s)	63, 272, 352, 366, 1385, 1558
NaeI	GCCGGC	1 cut(s)	562
NarI	GGCGCC	1 cut(s)	459
NciI	CCSGG	2 cut(s)	374, 527
NcoI	CCATGG	1 cut(s)	1347
NgoMIV	GCCGGC	1 cut(s)	560
NlaIII	CATG	7 cut(s)	454, 472, 1351, 1370, 1796, 1856, 1940
NlaIV	GGNNCC	8 cut(s)	121, 164, 460, 524, 533, 559, 828, 1142
NmeAIII	GCCGAG	1 cut(s)	96
NmuCI	GTSAC	3 cut(s)	281, 760, 1939
NruI	TCGCGA	1 cut(s)	63
NspI	RCATGY	2 cut(s)	454, 1940
NspV	TTCGAA	2 cut(s)	839, 1151
PaeR7I	CTCGAG	2 cut(s)	482, 500
PcsI	WCGNNNNNNNCGW	5 cut(s)	60, 123, 174, 480, 584
PdiI	GCCGGC	1 cut(s)	562
PdmI	GAANNNNTTC	1 cut(s)	1776
PfeI	GAWTC	6 cut(s)	29, 216, 249, 254, 754, 1286
PkrI	GCNGC	8 cut(s)	338, 368, 371, 400, 522, 1061, 1102, 1184
PleI	GAGTC	2 cut(s)	1155, 1675
PluTI	GGCGCC	1 cut(s)	462
PpsI	GAGTC	2 cut(s)	1155, 1675
Psp6I	CCWGG	2 cut(s)	207, 315
PspGI	CCWGG	2 cut(s)	207, 315
PspN4I	GGNNCC	8 cut(s)	121, 164, 460, 524, 533, 559, 828, 1142
PspPI	GGNCC	4 cut(s)	13, 319, 626, 826
PspXI	VCTCGAGB	2 cut(s)	482, 500
PsuI	RGATCY	4 cut(s)	76, 531, 1585, 1597
RruI	TCGCGA	1 cut(s)	63
RsaI	GTAC	3 cut(s)	488, 1302, 1613
RsaNI	GTAC	3 cut(s)	487, 1301, 1612
RseI	CAYNNNNRTG	1 cut(s)	897
SacII	CCGCGG	1 cut(s)	367
SalI	GTCGAC	2 cut(s)	170, 574
SaqAI	TTAA	6 cut(s)	654, 822, 990, 1134, 1203, 1278
SatI	GCNGC	8 cut(s)	337, 367, 370, 399, 521, 1060, 1101, 1183
Sau96I	GGNCC	4 cut(s)	13, 319, 626, 826
ScaI	AGTACT	1 cut(s)	488
SchI	GAGTC	2 cut(s)	1155, 1676
ScrFI	CCNGG	4 cut(s)	209, 317, 374, 527
SduI	GDGCHC	3 cut(s)	183, 483, 1145
SfaNI	GCATC	3 cut(s)	301, 1069, 1300
SfcI	CTRYAG	1 cut(s)	942
SfoI	GGCGCC	1 cut(s)	460
Sfr274I	CTCGAG	2 cut(s)	482, 500
Sfr303I	CCGCGG	1 cut(s)	367
SfuI	TTCGAA	2 cut(s)	839, 1151
SgrBI	CCGCGG	1 cut(s)	367
SgrDI	CGTCGACG	2 cut(s)	170, 574
SinI	GGWCC	3 cut(s)	13, 319, 626
SlaI	CTCGAG	2 cut(s)	482, 500
SmiMI	CAYNNNNRTG	1 cut(s)	897
SmlI	CTYRAG	5 cut(s)	356, 482, 500, 653, 746
SmoI	CTYRAG	5 cut(s)	356, 482, 500, 653, 746
SspDI	GGCGCC	1 cut(s)	458
SspMI	CTAG	2 cut(s)	297, 1583
StyD4I	CCNGG	4 cut(s)	207, 315, 372, 525
StyI	CCWWGG	2 cut(s)	462, 1347
TaaI	ACNGT	5 cut(s)	41, 52, 191, 1276, 1687
TaiI	ACGT	1 cut(s)	171
TaqII	GACCGA	1 cut(s)	779
TatI	WGTACW	1 cut(s)	486
TauI	GCSGC	4 cut(s)	369, 401, 523, 1062
TfiI	GAWTC	6 cut(s)	29, 216, 249, 254, 754, 1286
Tru1I	TTAA	6 cut(s)	654, 822, 990, 1134, 1203, 1278
Tru9I	TTAA	6 cut(s)	654, 822, 990, 1134, 1203, 1278
TscAI	CASTG	2 cut(s)	623, 1069
TseFI	GTSAC	3 cut(s)	281, 760, 1939
TseI	GCWGC	4 cut(s)	336, 369, 1100, 1182
Tsp45I	GTSAC	3 cut(s)	281, 760, 1939
TspDTI	ATGAA	4 cut(s)	217, 485, 731, 1743
TspGWI	ACGGA	3 cut(s)	247, 319, 427
TspRI	CASTG	2 cut(s)	623, 1069
Vha464I	CTTAAG	1 cut(s)	653
VpaK11BI	GGWCC	3 cut(s)	13, 319, 626
XapI	RAATTY	7 cut(s)	412, 738, 799, 841, 1085, 1507, 1861
XceI	RCATGY	2 cut(s)	454, 1940
XhoI	CTCGAG	2 cut(s)	482, 500
XmiI	GTMKAC	2 cut(s)	171, 575
XmnI	GAANNNNTTC	1 cut(s)	1776
XspI	CTAG	2 cut(s)	297, 1583
ZrmI	AGTACT	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.