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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_3G00224440 Rroxscaffold_6G00404520 Rroxscaffold_6G00404540 Rroxscaffold_6G00404960 Rroxscaffold_6G00404990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 149 |
| AciI | CCGC | 1 cut(s) | 147 |
| AcsI | RAATTY | 1 cut(s) | 279 |
| AfaI | GTAC | 2 cut(s) | 96, 186 |
| AgsI | TTSAA | 1 cut(s) | 302 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 59, 91, 294, 326 |
| AluBI | AGCT | 2 cut(s) | 75, 326 |
| AluI | AGCT | 2 cut(s) | 75, 326 |
| Alw26I | GTCTC | 1 cut(s) | 380 |
| ApeKI | GCWGC | 4 cut(s) | 28, 80, 102, 219 |
| ApoI | RAATTY | 1 cut(s) | 279 |
| BbvI | GCAGC | 4 cut(s) | 40, 92, 114, 231 |
| BcoDI | GTCTC | 1 cut(s) | 380 |
| BfaI | CTAG | 2 cut(s) | 87, 327 |
| BisI | GCNGC | 4 cut(s) | 29, 81, 103, 220 |
| BlsI | GCNGC | 4 cut(s) | 30, 82, 104, 221 |
| BmsI | GCATC | 1 cut(s) | 92 |
| BsaAI | YACGTR | 1 cut(s) | 98 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 373, 403 |
| Bse1I | ACTGG | 1 cut(s) | 375 |
| BseGI | GGATG | 2 cut(s) | 52, 321 |
| BseMII | CTCAG | 1 cut(s) | 375 |
| BseNI | ACTGG | 1 cut(s) | 375 |
| BseXI | GCAGC | 4 cut(s) | 40, 92, 114, 231 |
| Bsh1236I | CGCG | 1 cut(s) | 149 |
| BsmAI | GTCTC | 1 cut(s) | 380 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspACI | CCGC | 1 cut(s) | 147 |
| BspCNI | CTCAG | 1 cut(s) | 376 |
| BspFNI | CGCG | 1 cut(s) | 149 |
| BspQI | GCTCTTC | 1 cut(s) | 209 |
| BsrI | ACTGG | 1 cut(s) | 375 |
| BssMI | GATC | 1 cut(s) | 268 |
| Bst4CI | ACNGT | 2 cut(s) | 359, 407 |
| Bst6I | CTCTTC | 1 cut(s) | 209 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 108 |
| BstBAI | YACGTR | 1 cut(s) | 98 |
| BstDEI | CTNAG | 2 cut(s) | 71, 384 |
| BstF5I | GGATG | 2 cut(s) | 52, 321 |
| BstFNI | CGCG | 1 cut(s) | 149 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 1 cut(s) | 380 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 108 |
| BstNSI | RCATGY | 1 cut(s) | 398 |
| BstSNI | TACGTA | 1 cut(s) | 98 |
| BstUI | CGCG | 1 cut(s) | 149 |
| BstV1I | GCAGC | 4 cut(s) | 40, 92, 114, 231 |
| BtsCI | GGATG | 2 cut(s) | 52, 321 |
| Csp6I | GTAC | 2 cut(s) | 95, 185 |
| CviAII | CATG | 2 cut(s) | 377, 395 |
| CviJI | RGCY | 5 cut(s) | 31, 75, 105, 326, 374 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 75, 105, 326, 374 |
| CviQI | GTAC | 2 cut(s) | 95, 185 |
| DdeI | CTNAG | 2 cut(s) | 71, 384 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| Eam1104I | CTCTTC | 1 cut(s) | 209 |
| EarI | CTCTTC | 1 cut(s) | 209 |
| Eco105I | TACGTA | 1 cut(s) | 98 |
| EcoT22I | ATGCAT | 1 cut(s) | 400 |
| FaeI | CATG | 2 cut(s) | 380, 398 |
| FaiI | YATR | 4 cut(s) | 237, 296, 378, 396 |
| FatI | CATG | 2 cut(s) | 376, 394 |
| FauI | CCCGC | 1 cut(s) | 154 |
| Fnu4HI | GCNGC | 4 cut(s) | 29, 81, 103, 220 |
| FokI | GGATG | 2 cut(s) | 39, 328 |
| Fsp4HI | GCNGC | 4 cut(s) | 29, 81, 103, 220 |
| FspBI | CTAG | 2 cut(s) | 87, 327 |
| GluI | GCNGC | 4 cut(s) | 29, 81, 103, 220 |
| Hin1II | CATG | 2 cut(s) | 380, 398 |
| HindIII | AAGCTT | 1 cut(s) | 73 |
| HinfI | GANTC | 1 cut(s) | 388 |
| Hpy188III | TCNNGA | 1 cut(s) | 211 |
| HpyAV | CCTTC | 2 cut(s) | 140, 296 |
| HpyCH4III | ACNGT | 2 cut(s) | 359, 407 |
| HpyCH4IV | ACGT | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 7 cut(s) | 111, 167, 265, 332, 340, 380, 398 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 108 |
| HpyF3I | CTNAG | 2 cut(s) | 71, 384 |
| HpySE526I | ACGT | 1 cut(s) | 97 |
| Hsp92II | CATG | 2 cut(s) | 380, 398 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LguI | GCTCTTC | 1 cut(s) | 209 |
| LpnPI | CCDG | 1 cut(s) | 356 |
| Lsp1109I | GCAGC | 4 cut(s) | 40, 92, 114, 231 |
| LweI | GCATC | 1 cut(s) | 92 |
| MaeI | CTAG | 2 cut(s) | 87, 327 |
| MaeII | ACGT | 1 cut(s) | 97 |
| MaeIII | GTNAC | 1 cut(s) | 353 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 1 cut(s) | 226 |
| MluCI | AATT | 2 cut(s) | 156, 279 |
| MlyI | GAGTC | 1 cut(s) | 382 |
| MnlI | CCTC | 4 cut(s) | 22, 67, 153, 172 |
| Mph1103I | ATGCAT | 1 cut(s) | 400 |
| MvnI | CGCG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 108 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 2 cut(s) | 380, 398 |
| NsiI | ATGCAT | 1 cut(s) | 400 |
| NspI | RCATGY | 1 cut(s) | 398 |
| PciSI | GCTCTTC | 1 cut(s) | 209 |
| PkrI | GCNGC | 4 cut(s) | 30, 82, 104, 221 |
| PleI | GAGTC | 1 cut(s) | 382 |
| PpsI | GAGTC | 1 cut(s) | 382 |
| Ppu21I | YACGTR | 1 cut(s) | 98 |
| RsaI | GTAC | 2 cut(s) | 96, 186 |
| RsaNI | GTAC | 2 cut(s) | 95, 185 |
| SapI | GCTCTTC | 1 cut(s) | 209 |
| SatI | GCNGC | 4 cut(s) | 29, 81, 103, 220 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| SchI | GAGTC | 1 cut(s) | 382 |
| SetI | ASST | 6 cut(s) | 14, 77, 100, 145, 307, 328 |
| SfaNI | GCATC | 1 cut(s) | 92 |
| SnaBI | TACGTA | 1 cut(s) | 98 |
| Sse9I | AATT | 2 cut(s) | 156, 279 |
| SsiI | CCGC | 1 cut(s) | 147 |
| SspI | AATATT | 1 cut(s) | 251 |
| SspMI | CTAG | 2 cut(s) | 87, 327 |
| TaaI | ACNGT | 2 cut(s) | 359, 407 |
| TaiI | ACGT | 1 cut(s) | 100 |
| TasI | AATT | 2 cut(s) | 156, 279 |
| TatI | WGTACW | 1 cut(s) | 184 |
| TseI | GCWGC | 4 cut(s) | 28, 80, 102, 219 |
| TspDTI | ATGAA | 1 cut(s) | 41 |
| XapI | RAATTY | 1 cut(s) | 279 |
| XceI | RCATGY | 1 cut(s) | 398 |
| XspI | CTAG | 2 cut(s) | 87, 327 |
| Zsp2I | ATGCAT | 1 cut(s) | 400 |