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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51800 |
| fragaria_vesca | FvH4_7g28640 FvH4_7g28640 |
| malus_domestica | MD00G1003400.v1.1 MD01G1192000.v1.1 |
| prunus_persica | Prupe.2G286400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0376121 |
| rosa_laevigata | RLG00000026631 |
| rosa_multiflora | Rmu_ssc0000116.1_g000035 |
| rosa_roxburghii | Rroxscaffold_4G00282390 |
| rosa_rugosa | Rorug01G0393900 Rorug01G0394000 |
| rosa_samantha | Rh1AG405300 Rh1BG368900 Rh1BG369000 Rh1CG381900 Rh1DG398800 |
| rosa_wichuraiana | Rw1G035970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 1154, 2780, 2889 |
| Acc36I | ACCTGC | 3 cut(s) | 1154, 2780, 2889 |
| AccB1I | GGYRCC | 1 cut(s) | 2656 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 164, 546 |
| AccBSI | CCGCTC | 1 cut(s) | 1059 |
| AccI | GTMKAC | 1 cut(s) | 1815 |
| AccII | CGCG | 2 cut(s) | 710, 2708 |
| AclWI | GGATC | 2 cut(s) | 704, 1292 |
| AcoI | YGGCCR | 2 cut(s) | 247, 1880 |
| AcsI | RAATTY | 1 cut(s) | 54 |
| AcuI | CTGAAG | 4 cut(s) | 668, 1278, 1881, 2870 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 164, 252, 546, 648, 912, 1028, 1468, 2358 |
| AflIII | ACRYGT | 1 cut(s) | 2748 |
| AhlI | ACTAGT | 2 cut(s) | 239, 2222 |
| AjiI | CACGTC | 1 cut(s) | 2749 |
| AjnI | CCWGG | 1 cut(s) | 2676 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 243, 275, 2813, 2845 |
| AleI | CACNNNNGTG | 1 cut(s) | 1275 |
| Alw21I | GWGCWC | 7 cut(s) | 888, 1272, 1329, 1594, 2508, 2606, 2817 |
| Alw26I | GTCTC | 8 cut(s) | 220, 408, 699, 1002, 1637, 1746, 1941, 2087 |
| AlwI | GGATC | 2 cut(s) | 704, 1292 |
| Ama87I | CYCGRG | 1 cut(s) | 1584 |
| AoxI | GGCC | 8 cut(s) | 247, 421, 1451, 1765, 1880, 2238, 2451, 2852 |
| ApeKI | GCWGC | 8 cut(s) | 34, 1042, 1160, 1739, 2548, 2684, 2861, 2890 |
| ApoI | RAATTY | 1 cut(s) | 54 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1171, 1203, 2133, 2165 |
| AspLEI | GCGC | 3 cut(s) | 2518, 2548, 2710 |
| AspS9I | GGNCC | 6 cut(s) | 582, 903, 2238, 2267, 2433, 2833 |
| AsuC2I | CCSGG | 2 cut(s) | 506, 1623 |
| AsuII | TTCGAA | 2 cut(s) | 1717, 1831 |
| AsuNHI | GCTAGC | 2 cut(s) | 535, 2185 |
| AvaI | CYCGRG | 1 cut(s) | 1584 |
| AvaII | GGWCC | 5 cut(s) | 582, 903, 2267, 2433, 2833 |
| AxyI | CCTNAGG | 1 cut(s) | 418 |
| BaeGI | GKGCMC | 1 cut(s) | 2659 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 226, 226, 259, 259 |
| BalI | TGGCCA | 1 cut(s) | 1882 |
| BanI | GGYRCC | 1 cut(s) | 2656 |
| BanII | GRGCYC | 5 cut(s) | 888, 1329, 1594, 2508, 2817 |
| BauI | CACGAG | 2 cut(s) | 521, 2507 |
| BbsI | GAAGAC | 2 cut(s) | 267, 1816 |
| Bbv12I | GWGCWC | 7 cut(s) | 888, 1272, 1329, 1594, 2508, 2606, 2817 |
| BbvCI | CCTCAGC | 1 cut(s) | 2807 |
| BbvI | GCAGC | 8 cut(s) | 46, 1054, 1147, 1726, 2535, 2671, 2873, 2877 |
| BccI | CCATC | 6 cut(s) | 274, 336, 469, 1373, 1462, 1694 |
| BceAI | ACGGC | 1 cut(s) | 2110 |
| BciT130I | CCWGG | 1 cut(s) | 2678 |
| BciVI | GTATCC | 1 cut(s) | 361 |
| BclI | TGATCA | 5 cut(s) | 193, 1050, 1117, 1936, 2398 |
| BcnI | CCSGG | 2 cut(s) | 506, 1623 |
| BcoDI | GTCTC | 8 cut(s) | 220, 408, 699, 1002, 1637, 1746, 1941, 2087 |
| BcuI | ACTAGT | 2 cut(s) | 239, 2222 |
| BfaI | CTAG | 9 cut(s) | 231, 240, 536, 1151, 1673, 2147, 2186, 2223, 2229 |
| BfmI | CTRYAG | 5 cut(s) | 1161, 1572, 2034, 2859, 2891 |
| BfoI | RGCGCY | 2 cut(s) | 2519, 2549 |
| BfuAI | ACCTGC | 3 cut(s) | 1154, 2780, 2889 |
| BfuI | GTATCC | 1 cut(s) | 361 |
| BlpI | GCTNAGC | 1 cut(s) | 2691 |
| BmcAI | AGTACT | 2 cut(s) | 979, 2227 |
| Bme1390I | CCNGG | 3 cut(s) | 506, 1623, 2678 |
| Bme18I | GGWCC | 5 cut(s) | 582, 903, 2267, 2433, 2833 |
| BmeT110I | CYCGRG | 1 cut(s) | 1584 |
| BmgBI | CACGTC | 1 cut(s) | 2749 |
| BmgT120I | GGNCC | 6 cut(s) | 582, 903, 2238, 2267, 2433, 2833 |
| BmiI | GGNNCC | 9 cut(s) | 144, 583, 606, 904, 1103, 1303, 2239, 2627, 2658 |
| BmrFI | CCNGG | 3 cut(s) | 506, 1623, 2678 |
| BmrI | ACTGGG | 2 cut(s) | 1080, 1457 |
| BmsI | GCATC | 5 cut(s) | 98, 1667, 1791, 2186, 2793 |
| BmtI | GCTAGC | 2 cut(s) | 539, 2189 |
| BmuI | ACTGGG | 2 cut(s) | 1080, 1457 |
| BpiI | GAAGAC | 2 cut(s) | 267, 1816 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 904, 936 |
| BpmI | CTGGAG | 3 cut(s) | 1288, 2738, 2801 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2807, 2849 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2691 |
| Bpu14I | TTCGAA | 2 cut(s) | 1717, 1831 |
| BpuEI | CTTGAG | 1 cut(s) | 2504 |
| BpuMI | CCSGG | 2 cut(s) | 506, 1623 |
| BsaAI | YACGTR | 2 cut(s) | 1692, 2527 |
| BsaI | GGTCTC | 1 cut(s) | 220 |
| BsaJI | CCNNGG | 9 cut(s) | 363, 540, 568, 1276, 1347, 1362, 1585, 2436, 2454 |
| BsaWI | WCCGGW | 3 cut(s) | 113, 350, 584 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2711, 2741 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 164, 252, 546, 648, 912, 1028, 1468, 2358 |
| Bse118I | RCCGGY | 2 cut(s) | 245, 719 |
| Bse1I | ACTGG | 5 cut(s) | 628, 936, 1086, 1463, 1746 |
| Bse21I | CCTNAGG | 1 cut(s) | 418 |
| Bse3DI | GCAATG | 2 cut(s) | 2180, 2239 |
| BseBI | CCWGG | 1 cut(s) | 2678 |
| BseDI | CCNNGG | 9 cut(s) | 363, 540, 568, 1276, 1347, 1362, 1585, 2436, 2454 |
| BseGI | GGATG | 6 cut(s) | 328, 377, 1230, 1454, 1780, 1960 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 164, 252, 546, 648, 912, 1028, 1468, 2358 |
| BseMI | GCAATG | 2 cut(s) | 2180, 2239 |
| BseMII | CTCAG | 7 cut(s) | 432, 588, 627, 774, 1041, 2682, 2798 |
| BseNI | ACTGG | 5 cut(s) | 628, 936, 1086, 1463, 1746 |
| BseRI | GAGGAG | 5 cut(s) | 384, 792, 909, 1602, 2614 |
| BseSI | GKGCMC | 1 cut(s) | 2659 |
| BseXI | GCAGC | 8 cut(s) | 46, 1054, 1147, 1726, 2535, 2671, 2873, 2877 |
| BseYI | CCCAGC | 3 cut(s) | 742, 2168, 2583 |
| BsgI | GTGCAG | 1 cut(s) | 2534 |
| Bsh1236I | CGCG | 2 cut(s) | 710, 2708 |
| BshFI | GGCC | 8 cut(s) | 249, 423, 1453, 1767, 1882, 2240, 2453, 2854 |
| BshNI | GGYRCC | 1 cut(s) | 2656 |
| BsiHKAI | GWGCWC | 7 cut(s) | 888, 1272, 1329, 1594, 2508, 2606, 2817 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1584 |
| BsiSI | CCGG | 9 cut(s) | 114, 140, 246, 351, 506, 585, 720, 1622, 2711 |
| BsiWI | CGTACG | 1 cut(s) | 1692 |
| BslFI | GGGAC | 5 cut(s) | 295, 1638, 2230, 2588, 2600 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 164, 252, 546, 648, 912, 1028, 1468, 2358 |
| BsmAI | GTCTC | 8 cut(s) | 220, 408, 699, 1002, 1637, 1746, 1941, 2087 |
| BsmBI | CGTCTC | 4 cut(s) | 408, 699, 1002, 1941 |
| BsmFI | GGGAC | 5 cut(s) | 295, 1638, 2230, 2588, 2600 |
| BsmI | GAATGC | 1 cut(s) | 1321 |
| BsnI | GGCC | 8 cut(s) | 249, 423, 1453, 1767, 1882, 2240, 2453, 2854 |
| Bso31I | GGTCTC | 1 cut(s) | 220 |
| BsoBI | CYCGRG | 1 cut(s) | 1584 |
| Bsp119I | TTCGAA | 2 cut(s) | 1717, 1831 |
| Bsp1286I | GDGCHC | 8 cut(s) | 888, 1272, 1329, 1594, 2508, 2606, 2659, 2817 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2691 |
| Bsp19I | CCATGG | 2 cut(s) | 1347, 1362 |
| BspANI | GGCC | 8 cut(s) | 249, 423, 1453, 1767, 1882, 2240, 2453, 2854 |
| BspCNI | CTCAG | 7 cut(s) | 431, 587, 626, 775, 1040, 2683, 2799 |
| BspFNI | CGCG | 2 cut(s) | 710, 2708 |
| BspHI | TCATGA | 1 cut(s) | 1053 |
| BspLI | GGNNCC | 9 cut(s) | 144, 583, 606, 904, 1103, 1303, 2239, 2627, 2658 |
| BspMAI | CTGCAG | 3 cut(s) | 1165, 2863, 2895 |
| BspMI | ACCTGC | 3 cut(s) | 1154, 2780, 2889 |
| BspOI | GCTAGC | 2 cut(s) | 539, 2189 |
| BspPI | GGATC | 2 cut(s) | 704, 1292 |
| BspT104I | TTCGAA | 2 cut(s) | 1717, 1831 |
| BspT107I | GGYRCC | 1 cut(s) | 2656 |
| BspTNI | GGTCTC | 1 cut(s) | 220 |
| BsrBI | CCGCTC | 1 cut(s) | 1059 |
| BsrDI | GCAATG | 2 cut(s) | 2180, 2239 |
| BsrFI | RCCGGY | 2 cut(s) | 245, 719 |
| BsrI | ACTGG | 5 cut(s) | 628, 936, 1086, 1463, 1746 |
| BssAI | RCCGGY | 2 cut(s) | 245, 719 |
| BssECI | CCNNGG | 9 cut(s) | 363, 540, 568, 1276, 1347, 1362, 1585, 2436, 2454 |
| BssSI | CACGAG | 2 cut(s) | 521, 2507 |
| BssT1I | CCWWGG | 5 cut(s) | 540, 568, 1347, 1362, 2454 |
| Bst2BI | CACGAG | 2 cut(s) | 521, 2507 |
| Bst2UI | CCWGG | 1 cut(s) | 2678 |
| Bst6I | CTCTTC | 4 cut(s) | 471, 481, 864, 1923 |
| BstBAI | YACGTR | 2 cut(s) | 1692, 2527 |
| BstBI | TTCGAA | 2 cut(s) | 1717, 1831 |
| BstC8I | GCNNGC | 6 cut(s) | 537, 855, 888, 1329, 1357, 2187 |
| BstDSI | CCRYGG | 3 cut(s) | 1276, 1347, 1362 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1026 |
| BstF5I | GGATG | 6 cut(s) | 328, 377, 1230, 1454, 1780, 1960 |
| BstFNI | CGCG | 2 cut(s) | 710, 2708 |
| BstH2I | RGCGCY | 2 cut(s) | 2519, 2549 |
| BstHHI | GCGC | 3 cut(s) | 2518, 2548, 2710 |
| BstMAI | GTCTC | 8 cut(s) | 220, 408, 699, 1002, 1637, 1746, 1941, 2087 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 551, 716, 1305, 1589, 2543, 2654, 2803, 2812, 2890 |
| BstNI | CCWGG | 1 cut(s) | 2678 |
| BstNSI | RCATGY | 1 cut(s) | 742 |
| BstSCI | CCNGG | 3 cut(s) | 504, 1621, 2676 |
| BstSFI | CTRYAG | 5 cut(s) | 1161, 1572, 2034, 2859, 2891 |
| BstSLI | GKGCMC | 1 cut(s) | 2659 |
| BstUI | CGCG | 2 cut(s) | 710, 2708 |
| BstV1I | GCAGC | 8 cut(s) | 46, 1054, 1147, 1726, 2535, 2671, 2873, 2877 |
| BstV2I | GAAGAC | 2 cut(s) | 267, 1816 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2539 |
| Bsu36I | CCTNAGG | 1 cut(s) | 418 |
| BsuI | GTATCC | 1 cut(s) | 361 |
| BsuRI | GGCC | 8 cut(s) | 249, 423, 1453, 1767, 1882, 2240, 2453, 2854 |
| BtgI | CCRYGG | 3 cut(s) | 1276, 1347, 1362 |
| BtrI | CACGTC | 1 cut(s) | 2749 |
| BtsCI | GGATG | 6 cut(s) | 328, 377, 1230, 1454, 1780, 1960 |
| BtsIMutI | CAGTG | 8 cut(s) | 169, 621, 943, 1093, 2218, 2281, 2340, 2900 |
| BveI | ACCTGC | 3 cut(s) | 1154, 2780, 2889 |
| Cac8I | GCNNGC | 6 cut(s) | 537, 855, 888, 1329, 1357, 2187 |
| CciI | TCATGA | 1 cut(s) | 1053 |
| CfoI | GCGC | 3 cut(s) | 2518, 2548, 2710 |
| Cfr10I | RCCGGY | 2 cut(s) | 245, 719 |
| Cfr13I | GGNCC | 6 cut(s) | 582, 903, 2238, 2267, 2433, 2833 |
| CseI | GACGC | 2 cut(s) | 716, 1801 |
| CsiI | ACCWGGT | 1 cut(s) | 2676 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2345, 2380 |
| CviAII | CATG | 9 cut(s) | 739, 1054, 1230, 1348, 1363, 1819, 2414, 2566, 2732 |
| EaeI | YGGCCR | 2 cut(s) | 247, 1880 |
| Eam1104I | CTCTTC | 4 cut(s) | 471, 481, 864, 1923 |
| EarI | CTCTTC | 4 cut(s) | 471, 481, 864, 1923 |
| Ecl136II | GAGCTC | 5 cut(s) | 886, 1327, 1592, 2506, 2815 |
| Eco130I | CCWWGG | 5 cut(s) | 540, 568, 1347, 1362, 2454 |
| Eco24I | GRGCYC | 5 cut(s) | 888, 1329, 1594, 2508, 2817 |
| Eco31I | GGTCTC | 1 cut(s) | 220 |
| Eco32I | GATATC | 1 cut(s) | 619 |
| Eco47I | GGWCC | 5 cut(s) | 582, 903, 2267, 2433, 2833 |
| Eco53kI | GAGCTC | 5 cut(s) | 886, 1327, 1592, 2506, 2815 |
| Eco57I | CTGAAG | 4 cut(s) | 668, 1278, 1881, 2870 |
| Eco81I | CCTNAGG | 1 cut(s) | 418 |
| Eco88I | CYCGRG | 1 cut(s) | 1584 |
| EcoICRI | GAGCTC | 5 cut(s) | 886, 1327, 1592, 2506, 2815 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1026 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2433 |
| EcoRII | CCWGG | 1 cut(s) | 2676 |
| EcoRV | GATATC | 1 cut(s) | 619 |
| EcoT14I | CCWWGG | 5 cut(s) | 540, 568, 1347, 1362, 2454 |
| EcoT38I | GRGCYC | 5 cut(s) | 888, 1329, 1594, 2508, 2817 |
| ErhI | CCWWGG | 5 cut(s) | 540, 568, 1347, 1362, 2454 |
| Esp3I | CGTCTC | 4 cut(s) | 408, 699, 1002, 1941 |
| FaeI | CATG | 9 cut(s) | 742, 1057, 1233, 1351, 1366, 1822, 2417, 2569, 2735 |
| FaqI | GGGAC | 5 cut(s) | 295, 1638, 2230, 2588, 2600 |
| FatI | CATG | 9 cut(s) | 738, 1053, 1229, 1347, 1362, 1818, 2413, 2565, 2731 |
| FauNDI | CATATG | 1 cut(s) | 2579 |
| FbaI | TGATCA | 5 cut(s) | 193, 1050, 1117, 1936, 2398 |
| FblI | GTMKAC | 1 cut(s) | 1815 |
| FokI | GGATG | 6 cut(s) | 315, 364, 1237, 1441, 1787, 1947 |
| FriOI | GRGCYC | 5 cut(s) | 888, 1329, 1594, 2508, 2817 |
| FspBI | CTAG | 9 cut(s) | 231, 240, 536, 1151, 1673, 2147, 2186, 2223, 2229 |
| GlaI | GCGC | 3 cut(s) | 2517, 2547, 2709 |
| GsaI | CCCAGC | 3 cut(s) | 746, 2172, 2587 |
| GsuI | CTGGAG | 3 cut(s) | 1288, 2738, 2801 |
| HaeII | RGCGCY | 2 cut(s) | 2519, 2549 |
| HaeIII | GGCC | 8 cut(s) | 249, 423, 1453, 1767, 1882, 2240, 2453, 2854 |
| HapII | CCGG | 9 cut(s) | 114, 140, 246, 351, 506, 585, 720, 1622, 2711 |
| HgaI | GACGC | 2 cut(s) | 716, 1801 |
| HhaI | GCGC | 3 cut(s) | 2518, 2548, 2710 |
| Hin1II | CATG | 9 cut(s) | 742, 1057, 1233, 1351, 1366, 1822, 2417, 2569, 2735 |
| Hin6I | GCGC | 3 cut(s) | 2516, 2546, 2708 |
| HinP1I | GCGC | 3 cut(s) | 2516, 2546, 2708 |
| HincII | GTYRAC | 5 cut(s) | 629, 1405, 1424, 1816, 2322 |
| HindII | GTYRAC | 5 cut(s) | 629, 1405, 1424, 1816, 2322 |
| HindIII | AAGCTT | 4 cut(s) | 257, 839, 1368, 1863 |
| HpaII | CCGG | 9 cut(s) | 114, 140, 246, 351, 506, 585, 720, 1622, 2711 |
| Hpy166II | GTNNAC | 7 cut(s) | 629, 1405, 1424, 1619, 1816, 2322, 2746 |
| Hpy188III | TCNNGA | 9 cut(s) | 597, 906, 1054, 1288, 1312, 1474, 1900, 2078, 2818 |
| Hpy8I | GTNNAC | 7 cut(s) | 629, 1405, 1424, 1619, 1816, 2322, 2746 |
| Hpy99I | CGWCG | 6 cut(s) | 1016, 1209, 1817, 2131, 2504, 2645 |
| HpyAV | CCTTC | 8 cut(s) | 437, 1008, 1189, 1256, 1443, 1495, 1768, 1974 |
| HpyCH4IV | ACGT | 4 cut(s) | 1615, 1691, 2526, 2748 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 551, 716, 1305, 1589, 2543, 2654, 2803, 2812, 2890 |
| HpySE526I | ACGT | 4 cut(s) | 1615, 1691, 2526, 2748 |
| Hsp92II | CATG | 9 cut(s) | 742, 1057, 1233, 1351, 1366, 1822, 2417, 2569, 2735 |
| HspAI | GCGC | 3 cut(s) | 2516, 2546, 2708 |
| Ksp22I | TGATCA | 5 cut(s) | 193, 1050, 1117, 1936, 2398 |
| Lsp1109I | GCAGC | 8 cut(s) | 46, 1054, 1147, 1726, 2535, 2671, 2873, 2877 |
| LweI | GCATC | 5 cut(s) | 98, 1667, 1791, 2186, 2793 |
| MabI | ACCWGGT | 1 cut(s) | 2676 |
| MaeI | CTAG | 9 cut(s) | 231, 240, 536, 1151, 1673, 2147, 2186, 2223, 2229 |
| MaeII | ACGT | 4 cut(s) | 1615, 1691, 2526, 2748 |
| MbiI | CCGCTC | 1 cut(s) | 1059 |
| MhlI | GDGCHC | 8 cut(s) | 888, 1272, 1329, 1594, 2508, 2606, 2659, 2817 |
| MlsI | TGGCCA | 1 cut(s) | 1882 |
| MluCI | AATT | 7 cut(s) | 54, 203, 479, 795, 1209, 2085, 2098 |
| MluNI | TGGCCA | 1 cut(s) | 1882 |
| MlyI | GAGTC | 5 cut(s) | 286, 910, 946, 1748, 2130 |
| MmeI | TCCRAC | 2 cut(s) | 2109, 2376 |
| Mox20I | TGGCCA | 1 cut(s) | 1882 |
| MscI | TGGCCA | 1 cut(s) | 1882 |
| MseI | TTAA | 4 cut(s) | 98, 132, 1467, 2063 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1275, 2918 |
| Msp20I | TGGCCA | 1 cut(s) | 1882 |
| MspA1I | CMGCKG | 1 cut(s) | 2890 |
| MspI | CCGG | 9 cut(s) | 114, 140, 246, 351, 506, 585, 720, 1622, 2711 |
| MspR9I | CCNGG | 3 cut(s) | 506, 1623, 2678 |
| Mva1269I | GAATGC | 1 cut(s) | 1321 |
| MvaI | CCWGG | 1 cut(s) | 2678 |
| MvnI | CGCG | 2 cut(s) | 710, 2708 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 551, 716, 1305, 1589, 2543, 2654, 2803, 2812, 2890 |
| NciI | CCSGG | 2 cut(s) | 506, 1623 |
| NcoI | CCATGG | 2 cut(s) | 1347, 1362 |
| NdeI | CATATG | 1 cut(s) | 2579 |
| NheI | GCTAGC | 2 cut(s) | 535, 2185 |
| NlaIII | CATG | 9 cut(s) | 742, 1057, 1233, 1351, 1366, 1822, 2417, 2569, 2735 |
| NlaIV | GGNNCC | 9 cut(s) | 144, 583, 606, 904, 1103, 1303, 2239, 2627, 2658 |
| NmeAIII | GCCGAG | 1 cut(s) | 700 |
| NmuCI | GTSAC | 9 cut(s) | 109, 967, 1888, 1952, 2047, 2335, 2527, 2898, 2911 |
| NspI | RCATGY | 1 cut(s) | 742 |
| NspV | TTCGAA | 2 cut(s) | 1717, 1831 |
| OliI | CACNNNNGTG | 1 cut(s) | 1275 |
| PagI | TCATGA | 1 cut(s) | 1053 |
| PaqCI | CACCTGC | 3 cut(s) | 1154, 2780, 2889 |
| PctI | GAATGC | 1 cut(s) | 1321 |
| PfeI | GAWTC | 7 cut(s) | 217, 1238, 1291, 1343, 1667, 2668, 2821 |
| Pfl23II | CGTACG | 1 cut(s) | 1692 |
| PflFI | GACNNNGTC | 1 cut(s) | 1820 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 164, 546 |
| PleI | GAGTC | 5 cut(s) | 286, 910, 946, 1748, 2130 |
| PpsI | GAGTC | 5 cut(s) | 286, 910, 946, 1748, 2130 |
| Ppu21I | YACGTR | 2 cut(s) | 1692, 2527 |
| PpuMI | RGGWCCY | 1 cut(s) | 2433 |
| Psp124BI | GAGCTC | 5 cut(s) | 888, 1329, 1594, 2508, 2817 |
| Psp5II | RGGWCCY | 1 cut(s) | 2433 |
| Psp6I | CCWGG | 1 cut(s) | 2676 |
| PspFI | CCCAGC | 3 cut(s) | 742, 2168, 2583 |
| PspGI | CCWGG | 1 cut(s) | 2676 |
| PspLI | CGTACG | 1 cut(s) | 1692 |
| PspN4I | GGNNCC | 9 cut(s) | 144, 583, 606, 904, 1103, 1303, 2239, 2627, 2658 |
| PspPI | GGNCC | 6 cut(s) | 582, 903, 2238, 2267, 2433, 2833 |
| PspPPI | RGGWCCY | 1 cut(s) | 2433 |
| PstI | CTGCAG | 3 cut(s) | 1165, 2863, 2895 |
| PsyI | GACNNNGTC | 1 cut(s) | 1820 |
| PvuII | CAGCTG | 1 cut(s) | 2890 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1275, 2918 |
| SacI | GAGCTC | 5 cut(s) | 888, 1329, 1594, 2508, 2817 |
| SalI | GTCGAC | 1 cut(s) | 1814 |
| SaqAI | TTAA | 4 cut(s) | 98, 132, 1467, 2063 |
| Sau96I | GGNCC | 6 cut(s) | 582, 903, 2238, 2267, 2433, 2833 |
| ScaI | AGTACT | 2 cut(s) | 979, 2227 |
| SchI | GAGTC | 5 cut(s) | 286, 910, 946, 1748, 2130 |
| ScrFI | CCNGG | 3 cut(s) | 506, 1623, 2678 |
| SduI | GDGCHC | 8 cut(s) | 888, 1272, 1329, 1594, 2508, 2606, 2659, 2817 |
| SexAI | ACCWGGT | 1 cut(s) | 2676 |
| SfaNI | GCATC | 5 cut(s) | 98, 1667, 1791, 2186, 2793 |
| SfcI | CTRYAG | 5 cut(s) | 1161, 1572, 2034, 2859, 2891 |
| SfuI | TTCGAA | 2 cut(s) | 1717, 1831 |
| SinI | GGWCC | 5 cut(s) | 582, 903, 2267, 2433, 2833 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1275, 2918 |
| SmlI | CTYRAG | 1 cut(s) | 2519 |
| SmoI | CTYRAG | 1 cut(s) | 2519 |
| SpeI | ACTAGT | 2 cut(s) | 239, 2222 |
| Sse9I | AATT | 7 cut(s) | 54, 203, 479, 795, 1209, 2085, 2098 |
| SspI | AATATT | 1 cut(s) | 2311 |
| SspMI | CTAG | 9 cut(s) | 231, 240, 536, 1151, 1673, 2147, 2186, 2223, 2229 |
| SstI | GAGCTC | 5 cut(s) | 888, 1329, 1594, 2508, 2817 |
| StyD4I | CCNGG | 3 cut(s) | 504, 1621, 2676 |
| StyI | CCWWGG | 5 cut(s) | 540, 568, 1347, 1362, 2454 |
| TaiI | ACGT | 4 cut(s) | 1618, 1694, 2529, 2751 |
| TaqI | TCGA | 7 cut(s) | 1178, 1207, 1717, 1815, 1831, 2083, 2640 |
| TaqII | GACCGA | 1 cut(s) | 2255 |
| TasI | AATT | 7 cut(s) | 54, 203, 479, 795, 1209, 2085, 2098 |
| TatI | WGTACW | 3 cut(s) | 977, 2225, 2421 |
| TauI | GCSGC | 4 cut(s) | 991, 1302, 2243, 2690 |
| TfiI | GAWTC | 7 cut(s) | 217, 1238, 1291, 1343, 1667, 2668, 2821 |
| Tru1I | TTAA | 4 cut(s) | 98, 132, 1467, 2063 |
| Tru9I | TTAA | 4 cut(s) | 98, 132, 1467, 2063 |
| TscAI | CASTG | 8 cut(s) | 169, 628, 943, 1093, 2218, 2281, 2340, 2907 |
| TseFI | GTSAC | 9 cut(s) | 109, 967, 1888, 1952, 2047, 2335, 2527, 2898, 2911 |
| TseI | GCWGC | 8 cut(s) | 34, 1042, 1160, 1739, 2548, 2684, 2861, 2890 |
| Tsp45I | GTSAC | 9 cut(s) | 109, 967, 1888, 1952, 2047, 2335, 2527, 2898, 2911 |
| TspGWI | ACGGA | 6 cut(s) | 261, 617, 964, 1231, 2621, 2661 |
| TspRI | CASTG | 8 cut(s) | 169, 628, 943, 1093, 2218, 2281, 2340, 2907 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1820 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 164, 546 |
| VpaK11BI | GGWCC | 5 cut(s) | 582, 903, 2267, 2433, 2833 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1026 |
| XapI | RAATTY | 1 cut(s) | 54 |
| XceI | RCATGY | 1 cut(s) | 742 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2539 |
| XmiI | GTMKAC | 1 cut(s) | 1815 |
| XspI | CTAG | 9 cut(s) | 231, 240, 536, 1151, 1673, 2147, 2186, 2223, 2229 |
| ZrmI | AGTACT | 2 cut(s) | 979, 2227 |