Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009368

Physical Location & Seq

Genomic Coordinates Reverse (-)

23543142 .. 23557317

Gene Structure 14176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00303180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGGGGTGGGTGGTAAATTCTGGGACTTGCTTAAACCCTATGCTCGGCACGAGGGTTTTGATTTCTTGAGGAACAAGCGCGTGGCTGTCGACCTCTCCCTTTGGATTGTGCAGCATGAAACCGCTATCAAGGCGCGTGCACGAAGCCCCCACCTGAGGCTCACATTCTTCCGCACCATCAATCTCTTCGCCAAGTTTGGAGCATTTCCAGTCTTTGTGGTTGATGGAAGCCCATCACATCTAAAGTCGCAGGCGAGGACTGCAAGATTCTTTCGGTCTTCTGGTATTGATTCATCTAGTTTGCCTGTGGCTGAAGATGGCATTTCAGCTGAGAGGAACAGCAGATTTTCTAAGTATGTTCAAGAATGTGTGGAACTACTTGAACTACTTGGGATACCTGTTTTAAAGGCAAAAGGAGAGGCTGAAGCACTGTGCGGTCAATTAAATCTCGAAGGTGATGTAGATGCTTGCATCACATCTGATAGTGATTCCTTACTCTTTGGGGCTAAATGTGTGATAAAAAGCTTCCAATCCAATTCAAAGGAACCATTTGAATGTTACTACATGTCAGATATTGAAGCTGGTCTAGGTTTGAAAAGGAAACATATGATTGCCATCTCTCTTTTGGTTGGAAATGACCATGATTTGAATGGAGTGCCAGGTATTGGACTAGATACAGCTCTTCGCTTTGTCCAGACTTTTAGTGAAGATGAGATACTGAATAGATTACGTGATATAGGCAATGGCGATGCTTCACTGTTTCAAGGTGGTATCCAATATGTGGATGATATAGTACTGAGTTCAGCTGAGAGCTCATTAAGGGCAAAACTTTCTCATTGTTCATTCTGTGGGCATCCTGGCAGCAAAAAAGCTCATTCCAAGTCTTCCTGTCAATATTGTATTACCAACATGGATGAGGGTTGCTTGAAAAAGCCAGAGGGGTTCAGATGCAGTTGCTCTTCCTGTGATATGGATCGTAAAGAAAAGCAACAGAAAAAGCAAGAGAATTGGCGACTGAAAGTTCTCAACAAAATTGCACTGGAGCAGAATTTTCCCAATGAAGAGATAATTGAAATGTATTTGTGCAACAACCATGGTTACTTCAGTGCAAATGAGGGCCCTTGCATATCCTGGGAAAGTCCAAAAACTGAATTGGTGGTTGATTTCTTAGCTTTTCATCGGCTATGGGAACCATCTTATATTCGCCAGAGGATGCTTCCTATGTTGTCTACCATTTATTTGAGGAAATGGCAGAAACTCCTTTGGTGTTATGCATCAATTCGATTTGATGTGTTATTTCTACATCCTCAAATTGAATTACTCAGCTTACAACTGGTCTACATTAGCAAGTTCCATTCTGTATCAGTTTTGACAGCTAAAGGAGCCTCTGAGGCATTAGATATCTCTCAGAAGAAGGAAGCTGATCTTGATGTTGTTCTGACAGAGGCACACTTACCTGACACGAACAAATATGAGCTCCTAGAGAAAATGACCGCAGTCTCCAATTTACCTGTTGTTATCATGTCTGATGATGATGATATGAATGCCAAGATTGGTTGTCTGTTTAAAGGGGCTGTTTATTATATTGTTAAGCCAGTCACAATGGATAATCTCAAGAACCTATGGCAATTTGCATTCAAAAACAACAGAAATGTGGTCATAGACATTACTAAAGAGGAAAGCAAAGAAATGTTTCAAGCCATTTGCAGAGAGCTTGCAGCCAACGGATTGAAGGGGAAGCAATTGACTTTGTTGATAGAGAAGAGTTTGAATGCTAGGGATGTAAAGTGTGACAAAACAAGGTTTCATCAAGTTAAGGGACCCCCGATGACTACACTGCACGGTGTTGGCATGCTTGCGCACTCAAAAGAGACAGTTTGCTACCCGGATCGGTTTTGGAGCCAAACAACACATTGGCTTTTGGATTCTCATTTGTGCAACCGAGAAAACAATAAGCACTCTACGAGGAAGAGAGACACACCGCACGGTTTCCGGTGGACAAAGAGTAATCGAGACGACATTATACTCTTATGCGGCAGCACTTCCACGTGCATAATTCCGACATTTCAATTTCACCCGGATGTTCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008821 GO:0009555 GO:0009987 GO:0016787 GO:0016788 GO:0016889 GO:0016894 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0048229 GO:0048256 GO:0048856 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XPG_I XPG_N

Protein Analysis

696

Amino Acids

78.8

Weight (kDa)

8.08

Isoelectric Point (pI)

37.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
XPG_N	PF00752	1 - 93	1.7e-09	XPG N-terminal domain
XPG_I	PF00867	131 - 213	1.3e-21	XPG I-region
Response_reg	PF00072	454 - 540	3.4e-10	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01880 AT1G01880 AT1G01880 AT1G01880
fragaria_vesca	FvH4_7g12990 FvH4_7g12990 FvH4_7g12990
malus_domestica	MD07G1125800.v1.1 MD08G1041100.v1.1
prunus_persica	Prupe.2G154000_v2.0.a1 Prupe.2G154000_v2.0.a1
pyrus_communis	pycom07g11950
rosa_chinensis	RchiOBHm_Chr1g0352131
rosa_laevigata	RLG00000028358
rosa_multiflora	Rmu_sc0001599.1_g000011
rosa_roxburghii	Rroxscaffold_4G00303180
rosa_rugosa	Rorug01G0224900
rosa_samantha	Rh1AG239000 Rh1BG210000 Rh1CG223500 Rh1DG236700
rosa_wichuraiana	Rw1G020760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1860
AccB7I	CCANNNNNTGG	2 cut(s)	665, 781
AccI	GTMKAC	3 cut(s)	90, 1229, 1338
AccII	CGCG	2 cut(s)	81, 136
AciI	CCGC	6 cut(s)	123, 172, 435, 1494, 1982, 2034
AclWI	GGATC	2 cut(s)	981, 1896
AcsI	RAATTY	2 cut(s)	17, 1048
AcuI	CTGAAG	3 cut(s)	333, 444, 1087
AcvI	CACGTG	1 cut(s)	2049
AfaI	GTAC	1 cut(s)	795
AfiI	CCNNNNNNNGG	4 cut(s)	45, 156, 665, 781
AflIII	ACRYGT	1 cut(s)	564
AjnI	CCWGG	3 cut(s)	658, 856, 1130
Alw21I	GWGCWC	3 cut(s)	142, 815, 1479
Alw26I	GTCTC	4 cut(s)	1504, 1865, 1968, 2007
Alw44I	GTGCAC	1 cut(s)	138
AlwI	GGATC	2 cut(s)	981, 1896
AoxI	GGCC	1 cut(s)	1117
ApaI	GGGCCC	1 cut(s)	1121
ApaLI	GTGCAC	1 cut(s)	138
ApeKI	GCWGC	4 cut(s)	112, 861, 1718, 2037
ApoI	RAATTY	2 cut(s)	17, 1048
Asp700I	GAANNNNTTC	1 cut(s)	1692
AspLEI	GCGC	3 cut(s)	81, 136, 1861
AspS9I	GGNCC	3 cut(s)	1117, 1118, 1820
AsuC2I	CCSGG	2 cut(s)	1886, 2078
AsuHPI	GGTGA	2 cut(s)	467, 2066
AvaII	GGWCC	1 cut(s)	1820
AxyI	CCTNAGG	1 cut(s)	155
BaeGI	GKGCMC	2 cut(s)	142, 1121
BanII	GRGCYC	3 cut(s)	815, 1121, 1479
BarI	GAAGNNNNNNTAC	2 cut(s)	699, 731
BauI	CACGAG	1 cut(s)	50
BbrPI	CACGTG	1 cut(s)	2049
BbsI	GAAGAC	2 cut(s)	270, 876
Bbv12I	GWGCWC	3 cut(s)	142, 815, 1479
BbvI	GCAGC	4 cut(s)	124, 873, 1730, 2049
BccI	CCATC	6 cut(s)	185, 218, 241, 311, 623, 1201
BciT130I	CCWGG	3 cut(s)	660, 858, 1132
BciVI	GTATCC	2 cut(s)	387, 782
BcnI	CCSGG	2 cut(s)	1886, 2078
BcoDI	GTCTC	4 cut(s)	1504, 1865, 1968, 2007
BfaI	CTAG	5 cut(s)	297, 587, 671, 1481, 1776
BfuI	GTATCC	2 cut(s)	387, 782
BglI	GCCNNNNNGGC	1 cut(s)	1391
BisI	GCNGC	5 cut(s)	113, 862, 1719, 2035, 2038
BlsI	GCNGC	5 cut(s)	114, 863, 1720, 2036, 2039
BmcAI	AGTACT	1 cut(s)	795
Bme1390I	CCNGG	5 cut(s)	660, 858, 1132, 1886, 2078
Bme18I	GGWCC	1 cut(s)	1820
BmgT120I	GGNCC	3 cut(s)	1117, 1118, 1820
BmiI	GGNNCC	7 cut(s)	546, 1119, 1191, 1384, 1821, 1822, 1901
BmrFI	CCNGG	5 cut(s)	660, 858, 1132, 1886, 2078
BmsI	GCATC	7 cut(s)	454, 480, 739, 862, 938, 1203, 1283
BoxI	GACNNNNGTC	1 cut(s)	1496
BpiI	GAAGAC	2 cut(s)	270, 876
BpmI	CTGGAG	1 cut(s)	1061
BpuEI	CTTGAG	2 cut(s)	88, 1598
BpuMI	CCSGG	2 cut(s)	1886, 2078
BsaAI	YACGTR	2 cut(s)	731, 2049
BsaBI	GATNNNNATC	2 cut(s)	614, 972
BsaJI	CCNNGG	2 cut(s)	1093, 1131
BsaWI	WCCGGW	1 cut(s)	1992
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 156, 665, 781
Bse1I	ACTGG	4 cut(s)	209, 1044, 1338, 1595
Bse21I	CCTNAGG	1 cut(s)	155
Bse3DI	GCAATG	1 cut(s)	748
Bse8I	GATNNNNATC	2 cut(s)	614, 972
BseBI	CCWGG	3 cut(s)	660, 858, 1132
BseDI	CCNNGG	2 cut(s)	1093, 1131
BseGI	GGATG	7 cut(s)	790, 853, 919, 1218, 1303, 1786, 2086
BseJI	GATNNNNATC	2 cut(s)	614, 972
BseLI	CCNNNNNNNGG	4 cut(s)	45, 156, 665, 781
BseMI	GCAATG	1 cut(s)	748
BseMII	CTCAG	7 cut(s)	146, 321, 788, 798, 1336, 1380, 1421
BseNI	ACTGG	4 cut(s)	209, 1044, 1338, 1595
BseSI	GKGCMC	2 cut(s)	142, 1121
BseXI	GCAGC	4 cut(s)	124, 873, 1730, 2049
BsgI	GTGCAG	2 cut(s)	131, 1823
Bsh1236I	CGCG	2 cut(s)	81, 136
BshFI	GGCC	1 cut(s)	1119
BsiHKAI	GWGCWC	3 cut(s)	142, 815, 1479
BsiSI	CCGG	3 cut(s)	1886, 1993, 2078
BslFI	GGGAC	2 cut(s)	38, 1833
BslI	CCNNNNNNNGG	4 cut(s)	45, 156, 665, 781
BsmAI	GTCTC	4 cut(s)	1504, 1865, 1968, 2007
BsmBI	CGTCTC	1 cut(s)	2007
BsmFI	GGGAC	2 cut(s)	38, 1833
BsmI	GAATGC	3 cut(s)	1549, 1634, 1777
BsnI	GGCC	1 cut(s)	1119
Bsp120I	GGGCCC	1 cut(s)	1117
Bsp1286I	GDGCHC	4 cut(s)	142, 815, 1121, 1479
Bsp143I	GATC	3 cut(s)	973, 1423, 1888
Bsp19I	CCATGG	1 cut(s)	1093
BspACI	CCGC	6 cut(s)	123, 172, 435, 1494, 1982, 2034
BspANI	GGCC	1 cut(s)	1119
BspCNI	CTCAG	7 cut(s)	147, 322, 789, 799, 1335, 1381, 1420
BspFNI	CGCG	2 cut(s)	81, 136
BspLI	GGNNCC	7 cut(s)	546, 1119, 1191, 1384, 1821, 1822, 1901
BspPI	GGATC	2 cut(s)	981, 1896
BspQI	GCTCTTC	2 cut(s)	687, 964
BsrDI	GCAATG	1 cut(s)	748
BsrI	ACTGG	4 cut(s)	209, 1044, 1338, 1595
BssECI	CCNNGG	2 cut(s)	1093, 1131
BssMI	GATC	3 cut(s)	973, 1423, 1888
BssSI	CACGAG	1 cut(s)	50
BssT1I	CCWWGG	1 cut(s)	1093
Bst2BI	CACGAG	1 cut(s)	50
Bst2UI	CCWGG	3 cut(s)	660, 858, 1132
Bst4CI	ACNGT	5 cut(s)	432, 759, 1844, 1876, 1988
Bst6I	CTCTTC	6 cut(s)	191, 687, 964, 1056, 1757, 1964
BstBAI	YACGTR	2 cut(s)	731, 2049
BstC8I	GCNNGC	6 cut(s)	138, 252, 469, 1716, 1853, 1857
BstDEI	CTNAG	9 cut(s)	155, 330, 351, 797, 807, 1168, 1322, 1389, 1407
BstDSI	CCRYGG	1 cut(s)	1093
BstF5I	GGATG	7 cut(s)	790, 853, 919, 1218, 1303, 1786, 2086
BstFNI	CGCG	2 cut(s)	81, 136
BstHHI	GCGC	3 cut(s)	81, 136, 1861
BstKTI	GATC	3 cut(s)	976, 1426, 1891
BstMAI	GTCTC	4 cut(s)	1504, 1865, 1968, 2007
BstMBI	GATC	3 cut(s)	973, 1423, 1888
BstMWI	GCNNNNNNNGC	4 cut(s)	131, 260, 1382, 1391
BstNI	CCWGG	3 cut(s)	660, 858, 1132
BstNSI	RCATGY	2 cut(s)	568, 1855
BstPAI	GACNNNNGTC	1 cut(s)	1496
BstSCI	CCNGG	5 cut(s)	658, 856, 1130, 1884, 2076
BstSLI	GKGCMC	2 cut(s)	142, 1121
BstUI	CGCG	2 cut(s)	81, 136
BstV1I	GCAGC	4 cut(s)	124, 873, 1730, 2049
BstV2I	GAAGAC	2 cut(s)	270, 876
Bsu36I	CCTNAGG	1 cut(s)	155
BsuI	GTATCC	2 cut(s)	387, 782
BsuRI	GGCC	1 cut(s)	1119
BtgI	CCRYGG	1 cut(s)	1093
BtgZI	GCGATG	1 cut(s)	762
BtsCI	GGATG	7 cut(s)	790, 853, 919, 1218, 1303, 1786, 2086
BtsI	GCAGTG	1 cut(s)	1835
BtsIMutI	CAGTG	5 cut(s)	428, 755, 1037, 1111, 1835
Cac8I	GCNNGC	6 cut(s)	138, 252, 469, 1716, 1853, 1857
CfoI	GCGC	3 cut(s)	81, 136, 1861
Cfr13I	GGNCC	3 cut(s)	1117, 1118, 1820
Csp6I	GTAC	1 cut(s)	794
CviAII	CATG	7 cut(s)	116, 565, 641, 910, 1094, 1522, 1852
CviQI	GTAC	1 cut(s)	794
DdeI	CTNAG	9 cut(s)	155, 330, 351, 797, 807, 1168, 1322, 1389, 1407
DpnI	GATC	3 cut(s)	975, 1425, 1890
DpnII	GATC	3 cut(s)	973, 1423, 1888
DraI	TTTAAA	2 cut(s)	405, 1567
Eam1104I	CTCTTC	6 cut(s)	191, 687, 964, 1056, 1757, 1964
EarI	CTCTTC	6 cut(s)	191, 687, 964, 1056, 1757, 1964
Ecl136II	GAGCTC	2 cut(s)	813, 1477
Eco130I	CCWWGG	1 cut(s)	1093
Eco24I	GRGCYC	3 cut(s)	815, 1121, 1479
Eco32I	GATATC	1 cut(s)	1402
Eco47I	GGWCC	1 cut(s)	1820
Eco53kI	GAGCTC	2 cut(s)	813, 1477
Eco57I	CTGAAG	3 cut(s)	333, 444, 1087
Eco72I	CACGTG	1 cut(s)	2049
Eco81I	CCTNAGG	1 cut(s)	155
EcoICRI	GAGCTC	2 cut(s)	813, 1477
EcoO109I	RGGNCCY	3 cut(s)	1117, 1118, 1820
EcoRII	CCWGG	3 cut(s)	658, 856, 1130
EcoRV	GATATC	1 cut(s)	1402
EcoT14I	CCWWGG	1 cut(s)	1093
EcoT22I	ATGCAT	1 cut(s)	1276
EcoT38I	GRGCYC	3 cut(s)	815, 1121, 1479
ErhI	CCWWGG	1 cut(s)	1093
Esp3I	CGTCTC	1 cut(s)	2007
FaeI	CATG	7 cut(s)	119, 568, 644, 913, 1097, 1525, 1855
FalI	AAGNNNNNCTT	2 cut(s)	1410, 1442
FaqI	GGGAC	2 cut(s)	38, 1833
FatI	CATG	7 cut(s)	115, 564, 640, 909, 1093, 1521, 1851
FauNDI	CATATG	1 cut(s)	606
FblI	GTMKAC	3 cut(s)	90, 1229, 1338
Fnu4HI	GCNGC	5 cut(s)	113, 862, 1719, 2035, 2038
FokI	GGATG	6 cut(s)	797, 840, 926, 1225, 1290, 1793
FriOI	GRGCYC	3 cut(s)	815, 1121, 1479
Fsp4HI	GCNGC	5 cut(s)	113, 862, 1719, 2035, 2038
FspBI	CTAG	5 cut(s)	297, 587, 671, 1481, 1776
FspI	TGCGCA	1 cut(s)	1860
GlaI	GCGC	3 cut(s)	80, 135, 1860
GluI	GCNGC	5 cut(s)	113, 862, 1719, 2035, 2038
GsuI	CTGGAG	1 cut(s)	1061
HaeIII	GGCC	1 cut(s)	1119
HapII	CCGG	3 cut(s)	1886, 1993, 2078
HhaI	GCGC	3 cut(s)	81, 136, 1861
Hin1II	CATG	7 cut(s)	119, 568, 644, 913, 1097, 1525, 1855
Hin6I	GCGC	3 cut(s)	79, 134, 1859
HinP1I	GCGC	3 cut(s)	79, 134, 1859
HincII	GTYRAC	1 cut(s)	91
HindII	GTYRAC	1 cut(s)	91
HindIII	AAGCTT	1 cut(s)	523
HinfI	GANTC	4 cut(s)	267, 290, 488, 1925
HpaII	CCGG	3 cut(s)	1886, 1993, 2078
HphI	GGTGA	2 cut(s)	467, 2066
Hpy166II	GTNNAC	5 cut(s)	91, 140, 1230, 1339, 1998
Hpy188I	TCNGA	8 cut(s)	481, 571, 947, 1390, 1410, 1440, 1528, 2061
Hpy188III	TCNNGA	7 cut(s)	67, 362, 449, 694, 1427, 1615, 2012
Hpy8I	GTNNAC	5 cut(s)	91, 140, 1230, 1339, 1998
HpyAV	CCTTC	3 cut(s)	446, 1408, 1726
HpyCH4III	ACNGT	5 cut(s)	432, 759, 1844, 1876, 1988
HpyCH4IV	ACGT	2 cut(s)	730, 2048
HpyF10VI	GCNNNNNNNGC	4 cut(s)	131, 260, 1382, 1391
HpyF3I	CTNAG	9 cut(s)	155, 330, 351, 797, 807, 1168, 1322, 1389, 1407
HpySE526I	ACGT	2 cut(s)	730, 2048
Hsp92II	CATG	7 cut(s)	119, 568, 644, 913, 1097, 1525, 1855
HspAI	GCGC	3 cut(s)	79, 134, 1859
KflI	GGGWCCC	1 cut(s)	1820
Kzo9I	GATC	3 cut(s)	973, 1423, 1888
LguI	GCTCTTC	2 cut(s)	687, 964
LmnI	GCTCC	5 cut(s)	200, 1042, 1382, 1482, 1899
Lsp1109I	GCAGC	4 cut(s)	124, 873, 1730, 2049
LweI	GCATC	7 cut(s)	454, 480, 739, 862, 938, 1203, 1283
MaeI	CTAG	5 cut(s)	297, 587, 671, 1481, 1776
MaeII	ACGT	2 cut(s)	730, 2048
MaeIII	GTNAC	4 cut(s)	557, 1097, 1597, 1790
MalI	GATC	3 cut(s)	975, 1425, 1890
MboI	GATC	3 cut(s)	973, 1423, 1888
MfeI	CAATTG	1 cut(s)	1742
MhlI	GDGCHC	4 cut(s)	142, 815, 1121, 1479
MmeI	TCCRAC	2 cut(s)	610, 2084
Mph1103I	ATGCAT	1 cut(s)	1276
MroXI	GAANNNNTTC	1 cut(s)	1692
MseI	TTAA	7 cut(s)	33, 404, 443, 818, 1566, 1590, 1815
MslI	CAYNNNNRTG	2 cut(s)	553, 2079
MspA1I	CMGCKG	2 cut(s)	329, 806
MspI	CCGG	3 cut(s)	1886, 1993, 2078
MspR9I	CCNGG	5 cut(s)	660, 858, 1132, 1886, 2078
MunI	CAATTG	1 cut(s)	1742
Mva1269I	GAATGC	3 cut(s)	1549, 1634, 1777
MvaI	CCWGG	3 cut(s)	660, 858, 1132
MvnI	CGCG	2 cut(s)	81, 136
MwoI	GCNNNNNNNGC	4 cut(s)	131, 260, 1382, 1391
NciI	CCSGG	2 cut(s)	1886, 2078
NcoI	CCATGG	1 cut(s)	1093
NdeI	CATATG	1 cut(s)	606
NdeII	GATC	3 cut(s)	973, 1423, 1888
NlaIII	CATG	7 cut(s)	119, 568, 644, 913, 1097, 1525, 1855
NlaIV	GGNNCC	7 cut(s)	546, 1119, 1191, 1384, 1821, 1822, 1901
NmeAIII	GCCGAG	1 cut(s)	25
NmuCI	GTSAC	2 cut(s)	1597, 1790
NsbI	TGCGCA	1 cut(s)	1860
NsiI	ATGCAT	1 cut(s)	1276
NspI	RCATGY	2 cut(s)	568, 1855
PaeI	GCATGC	1 cut(s)	1855
PciI	ACATGT	1 cut(s)	564
PciSI	GCTCTTC	2 cut(s)	687, 964
PctI	GAATGC	3 cut(s)	1549, 1634, 1777
PdmI	GAANNNNTTC	1 cut(s)	1692
PfeI	GAWTC	4 cut(s)	267, 290, 488, 1925
PflMI	CCANNNNNTGG	2 cut(s)	665, 781
PkrI	GCNGC	5 cut(s)	114, 863, 1720, 2036, 2039
PmaCI	CACGTG	1 cut(s)	2049
PmlI	CACGTG	1 cut(s)	2049
Ppu21I	YACGTR	2 cut(s)	731, 2049
PpuMI	RGGWCCY	1 cut(s)	1820
PscI	ACATGT	1 cut(s)	564
PshAI	GACNNNNGTC	1 cut(s)	1496
Psp124BI	GAGCTC	2 cut(s)	815, 1479
Psp5II	RGGWCCY	1 cut(s)	1820
Psp6I	CCWGG	3 cut(s)	658, 856, 1130
PspCI	CACGTG	1 cut(s)	2049
PspGI	CCWGG	3 cut(s)	658, 856, 1130
PspN4I	GGNNCC	7 cut(s)	546, 1119, 1191, 1384, 1821, 1822, 1901
PspOMI	GGGCCC	1 cut(s)	1117
PspPI	GGNCC	3 cut(s)	1117, 1118, 1820
PspPPI	RGGWCCY	1 cut(s)	1820
PvuII	CAGCTG	2 cut(s)	329, 806
RsaI	GTAC	1 cut(s)	795
RsaNI	GTAC	1 cut(s)	794
RseI	CAYNNNNRTG	2 cut(s)	553, 2079
SacI	GAGCTC	2 cut(s)	815, 1479
SalI	GTCGAC	1 cut(s)	89
SapI	GCTCTTC	2 cut(s)	687, 964
SaqAI	TTAA	7 cut(s)	33, 404, 443, 818, 1566, 1590, 1815
SatI	GCNGC	5 cut(s)	113, 862, 1719, 2035, 2038
Sau3AI	GATC	3 cut(s)	973, 1423, 1888
Sau96I	GGNCC	3 cut(s)	1117, 1118, 1820
ScaI	AGTACT	1 cut(s)	795
ScrFI	CCNGG	5 cut(s)	660, 858, 1132, 1886, 2078
SduI	GDGCHC	4 cut(s)	142, 815, 1121, 1479
SfaNI	GCATC	7 cut(s)	454, 480, 739, 862, 938, 1203, 1283
SinI	GGWCC	1 cut(s)	1820
SmiMI	CAYNNNNRTG	2 cut(s)	553, 2079
SmlI	CTYRAG	2 cut(s)	67, 1613
SmoI	CTYRAG	2 cut(s)	67, 1613
SphI	GCATGC	1 cut(s)	1855
SsiI	CCGC	6 cut(s)	123, 172, 435, 1494, 1982, 2034
SspI	AATATT	1 cut(s)	896
SspMI	CTAG	5 cut(s)	297, 587, 671, 1481, 1776
SstI	GAGCTC	2 cut(s)	815, 1479
StyD4I	CCNGG	5 cut(s)	658, 856, 1130, 1884, 2076
StyI	CCWWGG	1 cut(s)	1093
TaaI	ACNGT	5 cut(s)	432, 759, 1844, 1876, 1988
TaiI	ACGT	2 cut(s)	733, 2051
TaqI	TCGA	4 cut(s)	90, 450, 1282, 2011
TaqII	GACCGA	1 cut(s)	264
TatI	WGTACW	1 cut(s)	793
TauI	GCSGC	1 cut(s)	2037
TfiI	GAWTC	4 cut(s)	267, 290, 488, 1925
Tru1I	TTAA	7 cut(s)	33, 404, 443, 818, 1566, 1590, 1815
Tru9I	TTAA	7 cut(s)	33, 404, 443, 818, 1566, 1590, 1815
TscAI	CASTG	5 cut(s)	435, 762, 1044, 1111, 1842
TseFI	GTSAC	2 cut(s)	1597, 1790
TseI	GCWGC	4 cut(s)	112, 861, 1718, 2037
Tsp45I	GTSAC	2 cut(s)	1597, 1790
TspDTI	ATGAA	7 cut(s)	132, 282, 831, 1074, 1166, 1556, 1796
TspGWI	ACGGA	1 cut(s)	1740
TspRI	CASTG	5 cut(s)	435, 762, 1044, 1111, 1842
Van91I	CCANNNNNTGG	2 cut(s)	665, 781
VneI	GTGCAC	1 cut(s)	138
VpaK11BI	GGWCC	1 cut(s)	1820
XapI	RAATTY	2 cut(s)	17, 1048
XceI	RCATGY	2 cut(s)	568, 1855
XcmI	CCANNNNNNNNNTGG	2 cut(s)	622, 647
XmiI	GTMKAC	3 cut(s)	90, 1229, 1338
XmnI	GAANNNNTTC	1 cut(s)	1692
XspI	CTAG	5 cut(s)	297, 587, 671, 1481, 1776
ZrmI	AGTACT	1 cut(s)	795
Zsp2I	ATGCAT	1 cut(s)	1276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.