Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0018279

Physical Location & Seq

Genomic Coordinates Reverse (-)

23939103 .. 23941814

Gene Structure 2712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00303560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGGCTACAACTAGAACAGCTCTGATGGAAACACAGACATACATTGTTCACATGGACAAGGCGAAATTCCCTGCCTGGGGTCACAAAGATCAACACTACTACTACAAAGCAGTGATGGATTCCATTACCGAACTCTCATCTCAAGAAGAAGAGGAAGAAGAAGGTCGCAAAGCATCAGCTCCTCAGCTTCTTTACATCTACAACACTGCTATTTCGGGTTTTGCAGCAAAGCTCTCAAGCAATCAACTCAAATCCTTGAGCCAAATCCATGGTTTCCTATATGCCACACCTGATGAGCTTCTAACTCTCCACACCACACACACTCCTCAGTTTCTTGGCTTACAAAAAGGGAAAGGACTTTGGAGAGCTCCCAACTTGGCCTCGGATGTGATCATTGGAGTTGTTGACACCGGAGTCTGGCCAGAACATGTTAGCTTCAAGGACAAAGGAATGTCCCCTGTACCCTCTCACTGGAACGGCACTTGTGAACAAGGCACAAGGTTCTCACACTCAAATTGTAACAGAAAGCTTATTGGTGCAAGAGCCTTTTTCCAAGGGTATGAGGCCATTGTCGGAAGAGTCAACGAAACAGTGGATTATAGATCCCCTCGTGACTCCGAAGGACATGGAACTCACACTGCTTCAACTGCAGGCGGTAATGTTGTCAAACAAGCAAGCTTATTTGGCTTAGCAAAGGGATCGGCCAGTGGAATGAGTCATTCTTCAAGAATTGCAGTCTATAAGGCCTGTTGGCCATCGGGGTGTGCTAATTCTGATGTAATGGCTGCAATTGACAGTGCTGTTTCTGATGGGGTAGACATTTTGTCACTCTCATTGGGAGGTCTTCCGAAACCTTATTTTCGTGACAATATTGCTATAGCTTCATTTGGTGCAGTCCAACACGGAGTTTCCGTGTCATCTTCAGCTGGAAATTCAGGTCCCTTTCGCTCAAGTGTTAGCAATACCGCACCTTGGATCATGACTGTTGCTGCTAGCTACACTGACCGAAGCTTCCCAGTGATAGTGAAGCTTGGGAATGGACAAACTTATGAAGGGTCATCACTATATCCAGGTAAGAAAACTAAGCAGTTGCCACTTGTGTATAACAGAACAGCAGGTGGCCAAGGGGCTGAGCATTGTGTCGATGGCTCGCTTGACACAAAGCTGGTGAAGGGAAAGATTGTAGCATGTGAGCGCGGAACACACAGCCGGACTGAAATTGGAGAGGAAGTGAAGAAAGCAGGAGGAGTCGGAATGCTTCTACTCAATAATGAAGCTCAAGGAGAGGAACTACTTGCTGATGCTCACATTTTGCCAGCCACTTCTCTTGGAGCTTCGGCTTCTAAAGCCGTGAGAAAATACGCAGGTGCAGCAAAGAAACCTACAACTTTGCTTCTGTTCCAAGGCACGGTCTTTGGTAAAACTGCTCCGGTGATGGCAGCATTTTCATCTAGGGGGCCAAGCTCAGTTGGACCGGACGTGATCAAGCCCGATGTGACTGCTCCTGGTGTCAACATTTTGGCTGCTTGGCCAGCCGAGACTAGCCCAACCAGGCTTAAAAGTGACAAGAGAAAGGTGTTGTTTAACATGGTCTCAGGCACTTCAATGTCTTGCCCTCACGTTAGTGGCTTAGCTGCTCTTATCAAATCAGTGCACAAAGATTGGTCACCTGCAGCAATCAAATCTGCACTTATGACTACAGCTTATACACTGAACAACAAAGGCTCTCCGATTTCTGATTTTGGCTCAAAAAATCAATCAGCTAATCCCTTTGCATTTGGTTCGGGGCATGTCAACCCAGAAAGTGCTGCCGATCCAGGACTAATTTATGATATCACCAGCAAAGATTACTTGCTCTATTTATGTAGCTTGAATTACACATCTTCCCAAATAGCTCTTTTCTCCAGTGGGATTAGTAACTTCACTTGTCCTAGCAACAGTGCAGTTCTTCTTCAGCCCGACGACTTGAACTACCCTTCATTCTCAGTGGTTTTCAAAAAAGGTGGAAGGAAAATGAGTGTGACATACAAGAGGACAGTGACAAATGTTGGTGCCATTAACCCTAGCACTTATGCAGTGCAAGTGGAAGCACCCATTGGAGTATCAGTTACTGTTGAACCTAGGAAGTTGGTTTTTAAGAAGATGGGTGAGAAATTGAGCTACAAGGTGAGTTTTGTTGGAGTGAGTACTATAACCTATTCCTCATTTGGATCCTTAGCTTGGGTGAGTGAGAAATATAGGGTTCGAAGTCCCATTGCAGTGATTTGGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031012 GO:0043170 GO:0044238 GO:0044421 GO:0044464 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

757

Amino Acids

80.8

Weight (kDa)

9.23

Isoelectric Point (pI)

36.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	13 - 104	7.6e-12	Peptidase inhibitor I9
Peptidase_S8	PF00082	128 - 582	3.2e-49	Subtilase family
PA	PF02225	363 - 449	1.5e-10	PA domain
fn3_6	PF17766	655 - 754	3.2e-29	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018279)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01900
malus_domestica	MD02G1196800.v1.1
prunus_persica	Prupe.2G152000_v2.0.a1
pyrus_communis	pycom02g16010
rosa_chinensis	RchiOBHm_Chr1g0351771
rosa_roxburghii	Rroxscaffold_4G00303560
rosa_rugosa	Rorug01G0221300
rosa_samantha	Rh1AG235300 Rh1DG232800
rosa_wichuraiana	Rw1G020480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	1106, 1355, 1678
AasI	GACNNNNNNGTC	1 cut(s)	413
Acc36I	ACCTGC	3 cut(s)	1106, 1355, 1678
AccB1I	GGYRCC	1 cut(s)	2051
AccI	GTMKAC	1 cut(s)	816
AccII	CGCG	1 cut(s)	1197
AciI	CCGC	3 cut(s)	654, 966, 1197
AclWI	GGATC	6 cut(s)	597, 706, 983, 1808, 2205, 2218
AcoI	YGGCCR	5 cut(s)	419, 702, 752, 1120, 1529
AcsI	RAATTY	2 cut(s)	65, 931
AcuI	CTGAAG	2 cut(s)	906, 1937
AfaI	GTAC	2 cut(s)	462, 2188
AfiI	CCNNNNNNNGG	7 cut(s)	76, 77, 417, 471, 972, 1408, 2220
AflIII	ACRYGT	1 cut(s)	427
AgsI	TTSAA	8 cut(s)	439, 645, 726, 1605, 1873, 1969, 1996, 2117
AhdI	GACNNNNNGTC	1 cut(s)	823
AjiI	CACGTC	1 cut(s)	1480
AjnI	CCWGG	5 cut(s)	74, 1069, 1504, 1550, 1816
AjuI	GAANNNNNNNTTGG	2 cut(s)	2079, 2111
AleI	CACNNNNGTG	1 cut(s)	1623
Alw21I	GWGCWC	2 cut(s)	370, 1656
Alw26I	GTCTC	2 cut(s)	1532, 1597
Alw44I	GTGCAC	1 cut(s)	1652
AlwI	GGATC	6 cut(s)	597, 706, 983, 1808, 2205, 2218
AlwNI	CAGNNNCTG	1 cut(s)	2111
AoxI	GGCC	9 cut(s)	378, 419, 564, 702, 744, 752, 1120, 1457, 1529
ApaLI	GTGCAC	1 cut(s)	1652
ApeKI	GCWGC	9 cut(s)	224, 785, 989, 1370, 1439, 1523, 1634, 1673, 1808
ApoI	RAATTY	2 cut(s)	65, 931
AspA2I	CCTAGG	1 cut(s)	2120
AspLEI	GCGC	1 cut(s)	1197
AspS9I	GGNCC	3 cut(s)	938, 1457, 1472
AsuHPI	GGTGA	7 cut(s)	1180, 1444, 1659, 1828, 2159, 2179, 2236
AsuII	TTCGAA	1 cut(s)	2245
AsuNHI	GCTAGC	1 cut(s)	992
AvaII	GGWCC	2 cut(s)	938, 1472
AvrII	CCTAGG	1 cut(s)	2120
BaeGI	GKGCMC	1 cut(s)	1656
BalI	TGGCCA	4 cut(s)	421, 754, 1122, 1531
BamHI	GGATCC	1 cut(s)	2210
BanI	GGYRCC	1 cut(s)	2051
BanII	GRGCYC	1 cut(s)	370
BauI	CACGAG	1 cut(s)	609
BbsI	GAAGAC	1 cut(s)	836
Bbv12I	GWGCWC	2 cut(s)	370, 1656
BbvCI	CCTCAGC	1 cut(s)	183
BbvI	GCAGC	9 cut(s)	236, 772, 976, 1382, 1451, 1510, 1621, 1685, 1795
BccI	CCATC	7 cut(s)	19, 109, 763, 803, 1139, 1429, 2137
BceAI	ACGGC	2 cut(s)	493, 1334
BcgI	CGANNNNNNTGC	6 cut(s)	681, 715, 1481, 1515, 1764, 1798
BciT130I	CCWGG	5 cut(s)	76, 1071, 1506, 1552, 1818
BclI	TGATCA	2 cut(s)	390, 1482
BcoDI	GTCTC	2 cut(s)	1532, 1597
BfaI	CTAG	7 cut(s)	12, 993, 1452, 1542, 1932, 2064, 2121
BfmI	CTRYAG	4 cut(s)	648, 876, 1671, 1698
BfuAI	ACCTGC	3 cut(s)	1106, 1355, 1678
BisI	GCNGC	9 cut(s)	225, 786, 990, 1371, 1440, 1524, 1635, 1674, 1809
BlnI	CCTAGG	1 cut(s)	2120
BlpI	GCTNAGC	3 cut(s)	688, 1131, 1630
BlsI	GCNGC	9 cut(s)	226, 787, 991, 1372, 1441, 1525, 1636, 1675, 1810
BmcAI	AGTACT	1 cut(s)	2188
Bme1390I	CCNGG	5 cut(s)	76, 1071, 1506, 1552, 1818
Bme18I	GGWCC	2 cut(s)	938, 1472
BmeRI	GACNNNNNGTC	1 cut(s)	823
BmgBI	CACGTC	1 cut(s)	1480
BmgT120I	GGNCC	3 cut(s)	938, 1457, 1472
BmiI	GGNNCC	4 cut(s)	940, 1458, 2053, 2212
BmrFI	CCNGG	5 cut(s)	76, 1071, 1506, 1552, 1818
BmrI	ACTGGG	1 cut(s)	1010
BmsI	GCATC	2 cut(s)	182, 1291
BmtI	GCTAGC	1 cut(s)	996
BmuI	ACTGGG	1 cut(s)	1010
BpiI	GAAGAC	1 cut(s)	836
BpmI	CTGGAG	1 cut(s)	1888
Bpu10I	CCTNAGC	2 cut(s)	183, 2215
Bpu1102I	GCTNAGC	3 cut(s)	688, 1131, 1630
Bpu14I	TTCGAA	1 cut(s)	2245
BpuEI	CTTGAG	5 cut(s)	126, 220, 277, 934, 1263
BsaI	GGTCTC	1 cut(s)	1597
BsaJI	CCNNGG	8 cut(s)	75, 268, 381, 553, 971, 1123, 1402, 2120
BsaWI	WCCGGW	3 cut(s)	410, 1429, 1474
BsaXI	ACNNNNNCTCC	8 cut(s)	307, 337, 897, 927, 1215, 1245, 2091, 2121
Bsc4I	CCNNNNNNNGG	7 cut(s)	76, 77, 417, 471, 972, 1408, 2220
Bse1I	ACTGG	4 cut(s)	476, 705, 1016, 1905
Bse3DI	GCAATG	1 cut(s)	2253
BseBI	CCWGG	5 cut(s)	76, 1071, 1506, 1552, 1818
BseDI	CCNNGG	8 cut(s)	75, 268, 381, 553, 971, 1123, 1402, 2120
BseGI	GGATG	1 cut(s)	391
BseLI	CCNNNNNNNGG	7 cut(s)	76, 77, 417, 471, 972, 1408, 2220
BseMI	GCAATG	1 cut(s)	2253
BseMII	CTCAG	6 cut(s)	197, 341, 1122, 1479, 1608, 1998
BseNI	ACTGG	4 cut(s)	476, 705, 1016, 1905
BseRI	GAGGAG	3 cut(s)	171, 315, 1260
BseSI	GKGCMC	1 cut(s)	1656
BseXI	GCAGC	9 cut(s)	236, 772, 976, 1382, 1451, 1510, 1621, 1685, 1795
BsgI	GTGCAG	4 cut(s)	912, 1389, 1671, 1962
Bsh1236I	CGCG	1 cut(s)	1197
BshFI	GGCC	9 cut(s)	380, 421, 566, 704, 746, 754, 1122, 1459, 1531
BshNI	GGYRCC	1 cut(s)	2051
BsiHKAI	GWGCWC	2 cut(s)	370, 1656
BsiSI	CCGG	4 cut(s)	411, 1210, 1430, 1475
BslFI	GGGAC	3 cut(s)	439, 924, 2235
BslI	CCNNNNNNNGG	7 cut(s)	76, 77, 417, 471, 972, 1408, 2220
BsmAI	GTCTC	2 cut(s)	1532, 1597
BsmFI	GGGAC	3 cut(s)	439, 924, 2235
BsmI	GAATGC	1 cut(s)	1260
BsnI	GGCC	9 cut(s)	380, 421, 566, 704, 746, 754, 1122, 1459, 1531
Bso31I	GGTCTC	1 cut(s)	1597
Bsp119I	TTCGAA	1 cut(s)	2245
Bsp1286I	GDGCHC	2 cut(s)	370, 1656
Bsp143I	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
Bsp1720I	GCTNAGC	3 cut(s)	688, 1131, 1630
Bsp19I	CCATGG	1 cut(s)	268
BspACI	CCGC	3 cut(s)	654, 966, 1197
BspANI	GGCC	9 cut(s)	380, 421, 566, 704, 746, 754, 1122, 1459, 1531
BspCNI	CTCAG	6 cut(s)	196, 340, 1123, 1478, 1607, 1997
BspFNI	CGCG	1 cut(s)	1197
BspHI	TCATGA	1 cut(s)	978
BspLI	GGNNCC	4 cut(s)	940, 1458, 2053, 2212
BspMAI	CTGCAG	2 cut(s)	652, 1675
BspMI	ACCTGC	3 cut(s)	1106, 1355, 1678
BspOI	GCTAGC	1 cut(s)	996
BspPI	GGATC	6 cut(s)	597, 706, 983, 1808, 2205, 2218
BspT104I	TTCGAA	1 cut(s)	2245
BspT107I	GGYRCC	1 cut(s)	2051
BspTNI	GGTCTC	1 cut(s)	1597
BsrDI	GCAATG	1 cut(s)	2253
BsrI	ACTGG	4 cut(s)	476, 705, 1016, 1905
BssECI	CCNNGG	8 cut(s)	75, 268, 381, 553, 971, 1123, 1402, 2120
BssMI	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	6 cut(s)	268, 553, 971, 1123, 1402, 2120
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	5 cut(s)	76, 1071, 1506, 1552, 1818
Bst4CI	ACNGT	7 cut(s)	592, 797, 985, 1411, 1940, 2038, 2113
Bst6I	CTCTTC	2 cut(s)	144, 571
BstBI	TTCGAA	1 cut(s)	2245
BstC8I	GCNNGC	6 cut(s)	652, 676, 994, 1151, 1317, 1533
BstDSI	CCRYGG	1 cut(s)	268
BstEII	GGTNACC	1 cut(s)	1665
BstF5I	GGATG	1 cut(s)	391
BstFNI	CGCG	1 cut(s)	1197
BstHHI	GCGC	1 cut(s)	1197
BstKTI	GATC	8 cut(s)	91, 393, 605, 701, 978, 1485, 1816, 2213
BstMAI	GTCTC	2 cut(s)	1532, 1597
BstMBI	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
BstMWI	GCNNNNNNNGC	5 cut(s)	647, 684, 1346, 1370, 1532
BstNI	CCWGG	5 cut(s)	76, 1071, 1506, 1552, 1818
BstNSI	RCATGY	3 cut(s)	431, 1191, 1793
BstPI	GGTNACC	1 cut(s)	1665
BstSCI	CCNGG	5 cut(s)	74, 1069, 1504, 1550, 1816
BstSFI	CTRYAG	4 cut(s)	648, 876, 1671, 1698
BstSLI	GKGCMC	1 cut(s)	1656
BstUI	CGCG	1 cut(s)	1197
BstV1I	GCAGC	9 cut(s)	236, 772, 976, 1382, 1451, 1510, 1621, 1685, 1795
BstV2I	GAAGAC	1 cut(s)	836
BstX2I	RGATCY	2 cut(s)	602, 2210
BstXI	CCANNNNNNTGG	1 cut(s)	269
BstYI	RGATCY	2 cut(s)	602, 2210
BsuRI	GGCC	9 cut(s)	380, 421, 566, 704, 746, 754, 1122, 1459, 1531
BtgI	CCRYGG	1 cut(s)	268
BtrI	CACGTC	1 cut(s)	1480
BtsCI	GGATG	1 cut(s)	391
BtsI	GCAGTG	5 cut(s)	117, 204, 636, 2082, 2265
BveI	ACCTGC	3 cut(s)	1106, 1355, 1678
Cac8I	GCNNGC	6 cut(s)	652, 676, 994, 1151, 1317, 1533
CaiI	CAGNNNCTG	1 cut(s)	2111
CciI	TCATGA	1 cut(s)	978
CfoI	GCGC	1 cut(s)	1197
Cfr13I	GGNCC	3 cut(s)	938, 1457, 1472
Csp6I	GTAC	2 cut(s)	461, 2187
CspCI	CAANNNNNGTGG	4 cut(s)	1309, 1344, 1984, 2019
CviAII	CATG	8 cut(s)	52, 269, 428, 626, 979, 1188, 1588, 1790
CviQI	GTAC	2 cut(s)	461, 2187
DpnI	GATC	8 cut(s)	90, 392, 604, 700, 977, 1484, 1815, 2212
DpnII	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
DrdI	GACNNNNNNGTC	1 cut(s)	413
DriI	GACNNNNNGTC	1 cut(s)	823
DseDI	GACNNNNNNGTC	1 cut(s)	413
EaeI	YGGCCR	5 cut(s)	419, 702, 752, 1120, 1529
Eam1104I	CTCTTC	2 cut(s)	144, 571
Eam1105I	GACNNNNNGTC	1 cut(s)	823
EarI	CTCTTC	2 cut(s)	144, 571
Ecl136II	GAGCTC	1 cut(s)	368
Eco130I	CCWWGG	6 cut(s)	268, 553, 971, 1123, 1402, 2120
Eco147I	AGGCCT	1 cut(s)	746
Eco24I	GRGCYC	1 cut(s)	370
Eco31I	GGTCTC	1 cut(s)	1597
Eco32I	GATATC	1 cut(s)	1834
Eco47I	GGWCC	2 cut(s)	938, 1472
Eco53kI	GAGCTC	1 cut(s)	368
Eco57I	CTGAAG	2 cut(s)	906, 1937
Eco91I	GGTNACC	1 cut(s)	1665
EcoICRI	GAGCTC	1 cut(s)	368
EcoO109I	RGGNCCY	1 cut(s)	938
EcoO65I	GGTNACC	1 cut(s)	1665
EcoRII	CCWGG	5 cut(s)	74, 1069, 1504, 1550, 1816
EcoRV	GATATC	1 cut(s)	1834
EcoT14I	CCWWGG	6 cut(s)	268, 553, 971, 1123, 1402, 2120
EcoT38I	GRGCYC	1 cut(s)	370
ErhI	CCWWGG	6 cut(s)	268, 553, 971, 1123, 1402, 2120
FaeI	CATG	8 cut(s)	55, 272, 431, 629, 982, 1191, 1591, 1793
FaqI	GGGAC	3 cut(s)	439, 924, 2235
FatI	CATG	8 cut(s)	51, 268, 427, 625, 978, 1187, 1587, 1789
FbaI	TGATCA	2 cut(s)	390, 1482
FblI	GTMKAC	1 cut(s)	816
Fnu4HI	GCNGC	9 cut(s)	225, 786, 990, 1371, 1440, 1524, 1635, 1674, 1809
FokI	GGATG	1 cut(s)	398
FriOI	GRGCYC	1 cut(s)	370
Fsp4HI	GCNGC	9 cut(s)	225, 786, 990, 1371, 1440, 1524, 1635, 1674, 1809
FspBI	CTAG	7 cut(s)	12, 993, 1452, 1542, 1932, 2064, 2121
GlaI	GCGC	1 cut(s)	1196
GluI	GCNGC	9 cut(s)	225, 786, 990, 1371, 1440, 1524, 1635, 1674, 1809
GsuI	CTGGAG	1 cut(s)	1888
HaeIII	GGCC	9 cut(s)	380, 421, 566, 704, 746, 754, 1122, 1459, 1531
HapII	CCGG	4 cut(s)	411, 1210, 1430, 1475
HhaI	GCGC	1 cut(s)	1197
Hin1II	CATG	8 cut(s)	55, 272, 431, 629, 982, 1191, 1591, 1793
Hin6I	GCGC	1 cut(s)	1195
HinP1I	GCGC	1 cut(s)	1195
HincII	GTYRAC	4 cut(s)	406, 583, 1513, 1795
HindII	GTYRAC	4 cut(s)	406, 583, 1513, 1795
HindIII	AAGCTT	4 cut(s)	527, 676, 1009, 1028
HinfI	GANTC	6 cut(s)	119, 414, 579, 614, 715, 1248
HpaII	CCGG	4 cut(s)	411, 1210, 1430, 1475
HphI	GGTGA	7 cut(s)	1180, 1444, 1659, 1828, 2159, 2179, 2236
Hpy166II	GTNNAC	8 cut(s)	49, 406, 488, 583, 817, 1513, 1654, 1795
Hpy188III	TCNNGA	5 cut(s)	143, 611, 726, 863, 979
Hpy8I	GTNNAC	8 cut(s)	49, 406, 488, 583, 817, 1513, 1654, 1795
Hpy99I	CGWCG	1 cut(s)	1964
HpyAV	CCTTC	6 cut(s)	155, 614, 1046, 1165, 1986, 2001
HpyCH4III	ACNGT	7 cut(s)	592, 797, 985, 1411, 1940, 2038, 2113
HpyCH4IV	ACGT	2 cut(s)	1479, 1620
HpyF10VI	GCNNNNNNNGC	5 cut(s)	647, 684, 1346, 1370, 1532
HpySE526I	ACGT	2 cut(s)	1479, 1620
Hsp92II	CATG	8 cut(s)	55, 272, 431, 629, 982, 1191, 1591, 1793
HspAI	GCGC	1 cut(s)	1195
Ksp22I	TGATCA	2 cut(s)	390, 1482
Kzo9I	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
LmnI	GCTCC	5 cut(s)	184, 373, 1331, 1432, 1507
Lsp1109I	GCAGC	9 cut(s)	236, 772, 976, 1382, 1451, 1510, 1621, 1685, 1795
LweI	GCATC	2 cut(s)	182, 1291
MaeI	CTAG	7 cut(s)	12, 993, 1452, 1542, 1932, 2064, 2121
MaeII	ACGT	2 cut(s)	1479, 1620
MalI	GATC	8 cut(s)	90, 392, 604, 700, 977, 1484, 1815, 2212
MboI	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
MfeI	CAATTG	1 cut(s)	789
MflI	RGATCY	2 cut(s)	602, 2210
MhlI	GDGCHC	2 cut(s)	370, 1656
MlsI	TGGCCA	4 cut(s)	421, 754, 1122, 1531
MluNI	TGGCCA	4 cut(s)	421, 754, 1122, 1531
MlyI	GAGTC	5 cut(s)	423, 588, 608, 724, 1257
MmeI	TCCRAC	5 cut(s)	553, 922, 1231, 1450, 2158
Mox20I	TGGCCA	4 cut(s)	421, 754, 1122, 1531
MscI	TGGCCA	4 cut(s)	421, 754, 1122, 1531
MseI	TTAA	4 cut(s)	1557, 1584, 2058, 2136
MslI	CAYNNNNRTG	4 cut(s)	760, 1604, 1623, 2258
Msp20I	TGGCCA	4 cut(s)	421, 754, 1122, 1531
MspA1I	CMGCKG	1 cut(s)	926
MspI	CCGG	4 cut(s)	411, 1210, 1430, 1475
MspR9I	CCNGG	5 cut(s)	76, 1071, 1506, 1552, 1818
MunI	CAATTG	1 cut(s)	789
Mva1269I	GAATGC	1 cut(s)	1260
MvaI	CCWGG	5 cut(s)	76, 1071, 1506, 1552, 1818
MvnI	CGCG	1 cut(s)	1197
MwoI	GCNNNNNNNGC	5 cut(s)	647, 684, 1346, 1370, 1532
NcoI	CCATGG	1 cut(s)	268
NdeII	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
NheI	GCTAGC	1 cut(s)	992
NlaIII	CATG	8 cut(s)	55, 272, 431, 629, 982, 1191, 1591, 1793
NlaIV	GGNNCC	4 cut(s)	940, 1458, 2053, 2212
NmeAIII	GCCGAG	1 cut(s)	1561
NmuCI	GTSAC	9 cut(s)	80, 611, 825, 863, 1495, 1562, 1665, 2020, 2038
NspI	RCATGY	3 cut(s)	431, 1191, 1793
NspV	TTCGAA	1 cut(s)	2245
OliI	CACNNNNGTG	1 cut(s)	1623
PagI	TCATGA	1 cut(s)	978
PaqCI	CACCTGC	3 cut(s)	1106, 1355, 1678
PceI	AGGCCT	1 cut(s)	746
PciI	ACATGT	1 cut(s)	427
PcsI	WCGNNNNNNNCGW	1 cut(s)	909
PctI	GAATGC	1 cut(s)	1260
PfeI	GAWTC	1 cut(s)	119
PfoI	TCCNGGA	1 cut(s)	1816
PkrI	GCNGC	9 cut(s)	226, 787, 991, 1372, 1441, 1525, 1636, 1675, 1810
PleI	GAGTC	5 cut(s)	422, 587, 608, 723, 1256
PpsI	GAGTC	5 cut(s)	422, 587, 608, 723, 1256
PpuMI	RGGWCCY	1 cut(s)	938
PscI	ACATGT	1 cut(s)	427
Psp124BI	GAGCTC	1 cut(s)	370
Psp5II	RGGWCCY	1 cut(s)	938
Psp6I	CCWGG	5 cut(s)	74, 1069, 1504, 1550, 1816
PspEI	GGTNACC	1 cut(s)	1665
PspGI	CCWGG	5 cut(s)	74, 1069, 1504, 1550, 1816
PspN4I	GGNNCC	4 cut(s)	940, 1458, 2053, 2212
PspPI	GGNCC	3 cut(s)	938, 1457, 1472
PspPPI	RGGWCCY	1 cut(s)	938
PstI	CTGCAG	2 cut(s)	652, 1675
PstNI	CAGNNNCTG	1 cut(s)	2111
PsuI	RGATCY	2 cut(s)	602, 2210
PvuII	CAGCTG	1 cut(s)	926
RsaI	GTAC	2 cut(s)	462, 2188
RsaNI	GTAC	2 cut(s)	461, 2187
RseI	CAYNNNNRTG	4 cut(s)	760, 1604, 1623, 2258
SacI	GAGCTC	1 cut(s)	370
SaqAI	TTAA	4 cut(s)	1557, 1584, 2058, 2136
SatI	GCNGC	9 cut(s)	225, 786, 990, 1371, 1440, 1524, 1635, 1674, 1809
Sau3AI	GATC	8 cut(s)	88, 390, 602, 698, 975, 1482, 1813, 2210
Sau96I	GGNCC	3 cut(s)	938, 1457, 1472
ScaI	AGTACT	1 cut(s)	2188
SchI	GAGTC	5 cut(s)	423, 588, 608, 724, 1257
ScrFI	CCNGG	5 cut(s)	76, 1071, 1506, 1552, 1818
SduI	GDGCHC	2 cut(s)	370, 1656
SfaNI	GCATC	2 cut(s)	182, 1291
SfcI	CTRYAG	4 cut(s)	648, 876, 1671, 1698
SfuI	TTCGAA	1 cut(s)	2245
SinI	GGWCC	2 cut(s)	938, 1472
SmiMI	CAYNNNNRTG	4 cut(s)	760, 1604, 1623, 2258
SmlI	CTYRAG	5 cut(s)	141, 235, 256, 949, 1278
SmoI	CTYRAG	5 cut(s)	141, 235, 256, 949, 1278
SseBI	AGGCCT	1 cut(s)	746
SsiI	CCGC	3 cut(s)	654, 966, 1197
SspI	AATATT	1 cut(s)	871
SspMI	CTAG	7 cut(s)	12, 993, 1452, 1542, 1932, 2064, 2121
SstI	GAGCTC	1 cut(s)	370
StuI	AGGCCT	1 cut(s)	746
StyD4I	CCNGG	5 cut(s)	74, 1069, 1504, 1550, 1816
StyI	CCWWGG	6 cut(s)	268, 553, 971, 1123, 1402, 2120
TaaI	ACNGT	7 cut(s)	592, 797, 985, 1411, 1940, 2038, 2113
TaiI	ACGT	2 cut(s)	1482, 1623
TaqI	TCGA	2 cut(s)	1143, 2245
TaqII	GACCGA	1 cut(s)	1020
TatI	WGTACW	1 cut(s)	2186
TfiI	GAWTC	1 cut(s)	119
Tru1I	TTAA	4 cut(s)	1557, 1584, 2058, 2136
Tru9I	TTAA	4 cut(s)	1557, 1584, 2058, 2136
TseFI	GTSAC	9 cut(s)	80, 611, 825, 863, 1495, 1562, 1665, 2020, 2038
TseI	GCWGC	9 cut(s)	224, 785, 989, 1370, 1439, 1523, 1634, 1673, 1808
Tsp45I	GTSAC	9 cut(s)	80, 611, 825, 863, 1495, 1562, 1665, 2020, 2038
TspDTI	ATGAA	5 cut(s)	873, 1065, 1287, 1437, 1968
TspGWI	ACGGA	2 cut(s)	901, 918
VneI	GTGCAC	1 cut(s)	1652
VpaK11BI	GGWCC	2 cut(s)	938, 1472
XapI	RAATTY	2 cut(s)	65, 931
XceI	RCATGY	3 cut(s)	431, 1191, 1793
XmaJI	CCTAGG	1 cut(s)	2120
XmiI	GTMKAC	1 cut(s)	816
XspI	CTAG	7 cut(s)	12, 993, 1452, 1542, 1932, 2064, 2121
ZrmI	AGTACT	1 cut(s)	2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.