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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0336491 |
| rosa_laevigata | RLG00000029363 RLG00000029365 RLG00000029368 |
| rosa_multiflora | Rmu_sc0001981.1_g000032 |
| rosa_roxburghii | Rroxscaffold_4G00315580 Rroxscaffold_4G00315630 |
| rosa_samantha | Rh1AG146300 Rh1DG153200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 722 |
| AcoI | YGGCCR | 2 cut(s) | 324, 366 |
| AcsI | RAATTY | 2 cut(s) | 116, 188 |
| AcuI | CTGAAG | 2 cut(s) | 161, 747 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 1 cut(s) | 286 |
| AgsI | TTSAA | 6 cut(s) | 271, 379, 609, 617, 682, 787 |
| AjnI | CCWGG | 1 cut(s) | 401 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 263, 295 |
| AluBI | AGCT | 6 cut(s) | 46, 139, 247, 523, 530, 596 |
| AluI | AGCT | 6 cut(s) | 46, 139, 247, 523, 530, 596 |
| Alw26I | GTCTC | 2 cut(s) | 84, 352 |
| AoxI | GGCC | 2 cut(s) | 324, 366 |
| ApeKI | GCWGC | 2 cut(s) | 136, 593 |
| ApoI | RAATTY | 2 cut(s) | 116, 188 |
| AspLEI | GCGC | 1 cut(s) | 472 |
| AsuHPI | GGTGA | 2 cut(s) | 26, 359 |
| BalI | TGGCCA | 1 cut(s) | 326 |
| BbsI | GAAGAC | 1 cut(s) | 137 |
| BbvI | GCAGC | 2 cut(s) | 148, 605 |
| BciT130I | CCWGG | 1 cut(s) | 403 |
| BcoDI | GTCTC | 2 cut(s) | 84, 352 |
| BfmI | CTRYAG | 2 cut(s) | 288, 687 |
| BisI | GCNGC | 2 cut(s) | 137, 594 |
| BlsI | GCNGC | 2 cut(s) | 138, 595 |
| Bme1390I | CCNGG | 1 cut(s) | 403 |
| BmrFI | CCNGG | 1 cut(s) | 403 |
| BpiI | GAAGAC | 1 cut(s) | 137 |
| BpmI | CTGGAG | 1 cut(s) | 542 |
| BpuEI | CTTGAG | 1 cut(s) | 662 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 1 cut(s) | 301 |
| BsaWI | WCCGGW | 1 cut(s) | 11 |
| Bse1I | ACTGG | 2 cut(s) | 580, 594 |
| BseBI | CCWGG | 1 cut(s) | 403 |
| BseDI | CCNNGG | 1 cut(s) | 301 |
| BseGI | GGATG | 2 cut(s) | 398, 627 |
| BseMII | CTCAG | 1 cut(s) | 321 |
| BseNI | ACTGG | 2 cut(s) | 580, 594 |
| BseXI | GCAGC | 2 cut(s) | 148, 605 |
| BseYI | CCCAGC | 1 cut(s) | 247 |
| BshFI | GGCC | 2 cut(s) | 326, 368 |
| BsiSI | CCGG | 1 cut(s) | 12 |
| BslFI | GGGAC | 2 cut(s) | 227, 332 |
| BsmAI | GTCTC | 2 cut(s) | 84, 352 |
| BsmFI | GGGAC | 2 cut(s) | 227, 332 |
| BsmI | GAATGC | 2 cut(s) | 472, 688 |
| BsnI | GGCC | 2 cut(s) | 326, 368 |
| BspANI | GGCC | 2 cut(s) | 326, 368 |
| BspCNI | CTCAG | 1 cut(s) | 322 |
| BspMAI | CTGCAG | 1 cut(s) | 292 |
| BsrI | ACTGG | 2 cut(s) | 580, 594 |
| BssECI | CCNNGG | 1 cut(s) | 301 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 1 cut(s) | 301 |
| Bst2UI | CCWGG | 1 cut(s) | 403 |
| Bst4CI | ACNGT | 3 cut(s) | 449, 720, 757 |
| Bst6I | CTCTTC | 1 cut(s) | 150 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 2 cut(s) | 147, 245 |
| BstDEI | CTNAG | 4 cut(s) | 234, 330, 531, 548 |
| BstF5I | GGATG | 2 cut(s) | 398, 627 |
| BstHHI | GCGC | 1 cut(s) | 472 |
| BstMAI | GTCTC | 2 cut(s) | 84, 352 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 142, 536, 593 |
| BstNI | CCWGG | 1 cut(s) | 403 |
| BstSCI | CCNGG | 1 cut(s) | 401 |
| BstSFI | CTRYAG | 2 cut(s) | 288, 687 |
| BstV1I | GCAGC | 2 cut(s) | 148, 605 |
| BstV2I | GAAGAC | 1 cut(s) | 137 |
| BsuRI | GGCC | 2 cut(s) | 326, 368 |
| BtsCI | GGATG | 2 cut(s) | 398, 627 |
| BtsIMutI | CAGTG | 5 cut(s) | 327, 454, 573, 587, 716 |
| Cac8I | GCNNGC | 2 cut(s) | 147, 245 |
| CfoI | GCGC | 1 cut(s) | 472 |
| CseI | GACGC | 1 cut(s) | 142 |
| Csp6I | GTAC | 1 cut(s) | 285 |
| CviAII | CATG | 1 cut(s) | 36 |
| CviJI | RGCY | 8 cut(s) | 46, 139, 247, 326, 368, 523, 530, 596 |
| CviKI_1 | RGCY | 8 cut(s) | 46, 139, 247, 326, 368, 523, 530, 596 |
| CviQI | GTAC | 1 cut(s) | 285 |
| DdeI | CTNAG | 4 cut(s) | 234, 330, 531, 548 |
| EaeI | YGGCCR | 2 cut(s) | 324, 366 |
| Eam1104I | CTCTTC | 1 cut(s) | 150 |
| EarI | CTCTTC | 1 cut(s) | 150 |
| Eco130I | CCWWGG | 1 cut(s) | 301 |
| Eco57I | CTGAAG | 2 cut(s) | 161, 747 |
| EcoRII | CCWGG | 1 cut(s) | 401 |
| EcoT14I | CCWWGG | 1 cut(s) | 301 |
| ErhI | CCWWGG | 1 cut(s) | 301 |
| FaeI | CATG | 1 cut(s) | 39 |
| FaiI | YATR | 8 cut(s) | 37, 443, 458, 464, 475, 510, 543, 636 |
| FaqI | GGGAC | 2 cut(s) | 227, 332 |
| FatI | CATG | 1 cut(s) | 35 |
| FblI | GTMKAC | 1 cut(s) | 722 |
| Fnu4HI | GCNGC | 2 cut(s) | 137, 594 |
| FokI | GGATG | 2 cut(s) | 385, 634 |
| Fsp4HI | GCNGC | 2 cut(s) | 137, 594 |
| GlaI | GCGC | 1 cut(s) | 471 |
| GluI | GCNGC | 2 cut(s) | 137, 594 |
| GsaI | CCCAGC | 1 cut(s) | 251 |
| GsuI | CTGGAG | 1 cut(s) | 542 |
| HaeIII | GGCC | 2 cut(s) | 326, 368 |
| HapII | CCGG | 1 cut(s) | 12 |
| HgaI | GACGC | 1 cut(s) | 142 |
| HhaI | GCGC | 1 cut(s) | 472 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 39 |
| Hin6I | GCGC | 1 cut(s) | 470 |
| HinP1I | GCGC | 1 cut(s) | 470 |
| HincII | GTYRAC | 1 cut(s) | 396 |
| HindII | GTYRAC | 1 cut(s) | 396 |
| HinfI | GANTC | 3 cut(s) | 32, 692, 770 |
| HpaII | CCGG | 1 cut(s) | 12 |
| HphI | GGTGA | 2 cut(s) | 26, 359 |
| Hpy166II | GTNNAC | 3 cut(s) | 396, 554, 723 |
| Hpy188I | TCNGA | 1 cut(s) | 390 |
| Hpy188III | TCNNGA | 3 cut(s) | 185, 559, 641 |
| Hpy8I | GTNNAC | 3 cut(s) | 396, 554, 723 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 5 cut(s) | 11, 76, 611, 706, 722 |
| HpyCH4III | ACNGT | 3 cut(s) | 449, 720, 757 |
| HpyCH4V | TGCA | 2 cut(s) | 290, 441 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 142, 536, 593 |
| HpyF3I | CTNAG | 4 cut(s) | 234, 330, 531, 548 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 1 cut(s) | 39 |
| HspAI | GCGC | 1 cut(s) | 470 |
| LmnI | GCTCC | 1 cut(s) | 251 |
| LpnPI | CCDG | 9 cut(s) | 25, 32, 233, 301, 388, 415, 561, 572, 575 |
| Lsp1109I | GCAGC | 2 cut(s) | 148, 605 |
| MaeIII | GTNAC | 3 cut(s) | 109, 487, 714 |
| MboII | GAAGA | 3 cut(s) | 142, 167, 305 |
| MfeI | CAATTG | 1 cut(s) | 362 |
| MlsI | TGGCCA | 1 cut(s) | 326 |
| MluNI | TGGCCA | 1 cut(s) | 326 |
| MnlI | CCTC | 9 cut(s) | 22, 54, 64, 151, 202, 384, 403, 431, 555 |
| Mox20I | TGGCCA | 1 cut(s) | 326 |
| MscI | TGGCCA | 1 cut(s) | 326 |
| MseI | TTAA | 3 cut(s) | 77, 198, 750 |
| Msp20I | TGGCCA | 1 cut(s) | 326 |
| MspA1I | CMGCKG | 2 cut(s) | 139, 596 |
| MspI | CCGG | 1 cut(s) | 12 |
| MspR9I | CCNGG | 1 cut(s) | 403 |
| MunI | CAATTG | 1 cut(s) | 362 |
| Mva1269I | GAATGC | 2 cut(s) | 472, 688 |
| MvaI | CCWGG | 1 cut(s) | 403 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 142, 536, 593 |
| NlaIII | CATG | 1 cut(s) | 39 |
| NmuCI | GTSAC | 2 cut(s) | 109, 714 |
| PctI | GAATGC | 2 cut(s) | 472, 688 |
| PfeI | GAWTC | 3 cut(s) | 32, 692, 770 |
| PfoI | TCCNGGA | 1 cut(s) | 401 |
| PkrI | GCNGC | 2 cut(s) | 138, 595 |
| Psp6I | CCWGG | 1 cut(s) | 401 |
| PspFI | CCCAGC | 1 cut(s) | 247 |
| PspGI | CCWGG | 1 cut(s) | 401 |
| PstI | CTGCAG | 1 cut(s) | 292 |
| PvuII | CAGCTG | 2 cut(s) | 139, 596 |
| RsaI | GTAC | 1 cut(s) | 286 |
| RsaNI | GTAC | 1 cut(s) | 285 |
| SaqAI | TTAA | 3 cut(s) | 77, 198, 750 |
| SatI | GCNGC | 2 cut(s) | 137, 594 |
| ScrFI | CCNGG | 1 cut(s) | 403 |
| SfcI | CTRYAG | 2 cut(s) | 288, 687 |
| SmlI | CTYRAG | 1 cut(s) | 641 |
| SmoI | CTYRAG | 1 cut(s) | 641 |
| SspI | AATATT | 2 cut(s) | 181, 612 |
| StyD4I | CCNGG | 1 cut(s) | 401 |
| StyI | CCWWGG | 1 cut(s) | 301 |
| TaaI | ACNGT | 3 cut(s) | 449, 720, 757 |
| TaqI | TCGA | 1 cut(s) | 184 |
| TfiI | GAWTC | 3 cut(s) | 32, 692, 770 |
| Tru1I | TTAA | 3 cut(s) | 77, 198, 750 |
| Tru9I | TTAA | 3 cut(s) | 77, 198, 750 |
| TscAI | CASTG | 5 cut(s) | 334, 454, 580, 594, 723 |
| TseFI | GTSAC | 2 cut(s) | 109, 714 |
| TseI | GCWGC | 2 cut(s) | 136, 593 |
| Tsp45I | GTSAC | 2 cut(s) | 109, 714 |
| TspDTI | ATGAA | 2 cut(s) | 24, 479 |
| TspGWI | ACGGA | 1 cut(s) | 417 |
| TspRI | CASTG | 5 cut(s) | 334, 454, 580, 594, 723 |
| XapI | RAATTY | 2 cut(s) | 116, 188 |
| XmiI | GTMKAC | 1 cut(s) | 722 |