Rroxscaffold_4G00318190
ERF Family

Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0010940
Physical Location & Seq
Reverse (-)
44202394 .. 44206955
4562 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00318190.1

Sequence Viewer

Length: 1263 bp
ATGGCCGCCGCCGCCGTGGATGAGTCGCAGAAATGGGTGCTGATGGTGACAGCGCAGACGCCGACCAACATCGCGGTGATCAAGTACTGGGGAAAGAGGGACGAGAAGCTCATCTTGCCGGTCAACGACAGCATCAGCGTCACGCTTGATCCCGGCCACCTCTGCACCACCACCACCGTCTCCGTCAGCCCCGCCTTCACCCAAGATCGCATGTGGCTCAACGGCCAGGAGATTTCGCTTTCCGGAGGCAGATTCCAGAGCTGTTTGAGGGAAATTCGGAGTCGAGCTTGCGACGTTCATGACAAGGAAAAGGGAATCAAGATCAATAAGAAGGATTGGGACGGCTTGCACGTGCACATCGCTTCCTTTAACAATTTTCCTACTGCTGCTGGATTGGCTTCCTCCGCAGCTGGTTTTGCTTGTCTTGTTTTTGCGCTTGGAAAGTTAATGAATGTAAAGGAAGATCAGAGCCAGCTTTCTGCTATTGCAAGGCAAGGTTCAGGCAGTGCTTGTCGCAGCTTATATGGGGGATTTGTCAAGTGGATCATGGGAAAAGACGACAAGGGAACCGACAGTCTTGCAGTTCAACTTGCAGACGAGAAGCACTGGGATGAGCTTGTCATTATTATTGCTGTGGTAAGTTCAAGGCAGAAGGAAACAAGTAGTACTACAGGAATGCGTGATACCGTCGAAACAAGTTTACTGTTACAACATAGAGCGAAGGAAGTAGTGCCCAAACGCATATTAAAAATGGAAGAAGCCATTAGGAATCGAGATTTTGCTTCTTTTGCACAGTTGACCTGTACTGACAGCAACCAGTTTCATGCCGTCTGCCTGGATACATGTCCTCCCATATTCTACATGAATGATACATCCCACAGGATAATCAGCCTTGTTGAGAAGTGGAACTGCTCAGAAGGAACACCTCAGGTGGCTTATACATTTGATGCGGGCCCGAATGCGGTTATGATTGCACGTGACAGAAAAACTGCTACCCTTTTGCTTCAGAAGCTTCTTTACACTTTCCCTCCAAATTCTGATGCGGATTTGAACAGTTTTGTTCTTGGTGATAAGTCAATTTTAAAAGATGCTGGTATTAATGCCCCGGAGGATATCGCGACTTTACCTCCACCTCCAGAAATCAAGGGCCAGCAGTTCAAAGGAGATGTTAGTTACTTTATTTGCACAAGACCTGGGAGAGGTCCAGTGGTGTTGTCAGATGAAACTCATCTTCTCAACCCTGAAACTGGGCTGCCGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004163 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006066 GO:0006084 GO:0006139 GO:0006163 GO:0006464 GO:0006486 GO:0006487 GO:0006488 GO:0006489 GO:0006490 GO:0006629 GO:0006637 GO:0006644 GO:0006694 GO:0006695 GO:0006720 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008202 GO:0008203 GO:0008284 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009117 GO:0009150 GO:0009240 GO:0009259 GO:0009889 GO:0009987 GO:0016125 GO:0016126 GO:0016829 GO:0016830 GO:0016831 GO:0019216 GO:0019218 GO:0019222 GO:0019287 GO:0019538 GO:0019637 GO:0019693 GO:0030544 GO:0031072 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0034645 GO:0035383 GO:0036211 GO:0042127 GO:0042579 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045540 GO:0046165 GO:0046465 GO:0046483 GO:0046490 GO:0046890 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050810 GO:0051186 GO:0055086 GO:0062012 GO:0065007 GO:0070085 GO:0071704 GO:0072521 GO:0080090 GO:0090181 GO:0090407 GO:0106118 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617 GO:1902652 GO:1902653 GO:1902930
KEGG Pathways
Metabolic & Signaling
ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130
Pfam Domains
Protein Families
GHMP_kinases_N

Protein Analysis

420

Amino Acids

46.12

Weight (kDa)

6.52

Isoelectric Point (pI)

44.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MVD-like_N PF22700 21 - 194 1.7e-64 Diphosphomevalonate decarboxylase-like N-terminal domain
GHMP_kinases_N PF00288 114 - 170 7.6e-06 GHMP kinases N terminal domain
MDD_C PF18376 208 - 404 4.7e-65 Mevalonate 5-diphosphate decarboxylase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010940)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38700 AT3G54250
fragaria_vesca FvH4_7g05610 FvH4_7g05610
malus_domestica MD02G1256300.v1.1 MD07G1064100.v1.1
prunus_persica Prupe.2G078900_v2.0.a1
pyrus_communis pycom02g21690 pycom07g04970
rosa_chinensis RchiOBHm_Chr1g0332421
rosa_laevigata RLG00000029671
rosa_multiflora Rmu_sc0016943.1_g000003 Rmu_ssc0000161.1_g000007
rosa_roxburghii Rroxscaffold_4G00318190
rosa_rugosa Rorug01G0100700
rosa_samantha Rh1AG124800 Rh1BG095200 Rh1CG118900 Rh1DG129700
rosa_wichuraiana Rw1G010140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 74, 1118
AccIII TCCGGA 1 cut(s) 242
AciI CCGC 9 cut(s) 6, 9, 12, 74, 192, 405, 950, 962, 1043
AclWI GGATC 2 cut(s) 143, 551
AcoI YGGCCR 3 cut(s) 3, 154, 223
AcsI RAATTY 2 cut(s) 273, 1033
AcuI CTGAAG 1 cut(s) 989
AcvI CACGTG 2 cut(s) 352, 977
AcyI GRCGYC 1 cut(s) 59
AfaI GTAC 3 cut(s) 86, 667, 805
AfiI CCNNNNNNNGG 3 cut(s) 961, 1199, 1247
AflIII ACRYGT 1 cut(s) 842
AgsI TTSAA 4 cut(s) 587, 645, 1051, 1159
AjnI CCWGG 3 cut(s) 225, 834, 1192
AluBI AGCT 8 cut(s) 109, 261, 287, 410, 475, 519, 616, 1012
AluI AGCT 8 cut(s) 109, 261, 287, 410, 475, 519, 616, 1012
Alw21I GWGCWC 1 cut(s) 357
Alw26I GTCTC 1 cut(s) 184
Alw44I GTGCAC 1 cut(s) 353
AlwI GGATC 2 cut(s) 143, 551
Aor13HI TCCGGA 1 cut(s) 242
AoxI GGCC 5 cut(s) 3, 154, 223, 952, 1147
ApaI GGGCCC 1 cut(s) 956
ApaLI GTGCAC 1 cut(s) 353
ApeKI GCWGC 4 cut(s) 386, 407, 516, 1252
ApoI RAATTY 2 cut(s) 273, 1033
AseI ATTAAT 1 cut(s) 1098
AspLEI GCGC 2 cut(s) 55, 436
AspS9I GGNCC 4 cut(s) 952, 953, 1147, 1202
AsuC2I CCSGG 2 cut(s) 153, 1106
AsuHPI GGTGA 4 cut(s) 58, 88, 190, 1079
AvaII GGWCC 1 cut(s) 1202
AxyI CCTNAGG 1 cut(s) 927
BaeGI GKGCMC 3 cut(s) 357, 735, 956
BanII GRGCYC 1 cut(s) 956
BarI GAAGNNNNNNTAC 2 cut(s) 1001, 1033
BbrPI CACGTG 2 cut(s) 352, 977
Bbv12I GWGCWC 1 cut(s) 357
BbvI GCAGC 4 cut(s) 373, 419, 528, 1239
BccI CCATC 1 cut(s) 37
BceAI ACGGC 3 cut(s) 238, 358, 812
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 3 cut(s) 227, 836, 1194
BciVI GTATCC 1 cut(s) 832
BclI TGATCA 1 cut(s) 78
BcnI CCSGG 2 cut(s) 153, 1106
BcoDI GTCTC 1 cut(s) 184
BfmI CTRYAG 1 cut(s) 669
BfuI GTATCC 1 cut(s) 832
BisI GCNGC 7 cut(s) 6, 9, 12, 387, 408, 517, 1253
BlsI GCNGC 7 cut(s) 7, 10, 13, 388, 409, 518, 1254
BmcAI AGTACT 2 cut(s) 86, 667
Bme1390I CCNGG 5 cut(s) 153, 227, 836, 1106, 1194
Bme18I GGWCC 1 cut(s) 1202
BmgT120I GGNCC 4 cut(s) 952, 953, 1147, 1202
BmiI GGNNCC 2 cut(s) 568, 954
BmrFI CCNGG 5 cut(s) 153, 227, 836, 1106, 1194
BmrI ACTGGG 3 cut(s) 97, 616, 1257
BmsI GCATC 4 cut(s) 141, 937, 1030, 1078
BmuI ACTGGG 3 cut(s) 97, 616, 1257
BpmI CTGGAG 1 cut(s) 1119
BpuMI CCSGG 2 cut(s) 153, 1106
BsaAI YACGTR 2 cut(s) 352, 977
BsaHI GRCGYC 1 cut(s) 59
BsaJI CCNNGG 3 cut(s) 15, 1104, 1193
BsaWI WCCGGW 1 cut(s) 242
BsaXI ACNNNNNCTCC 6 cut(s) 832, 862, 1012, 1042, 1111, 1141
Bsc4I CCNNNNNNNGG 3 cut(s) 961, 1199, 1247
Bse118I RCCGGY 1 cut(s) 118
Bse1I ACTGG 5 cut(s) 92, 611, 817, 1205, 1252
Bse21I CCTNAGG 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 242
BseBI CCWGG 3 cut(s) 227, 836, 1194
BseDI CCNNGG 3 cut(s) 15, 1104, 1193
BseGI GGATG 3 cut(s) 25, 616, 872
BseLI CCNNNNNNNGG 3 cut(s) 961, 1199, 1247
BseMII CTCAG 2 cut(s) 927, 941
BseNI ACTGG 5 cut(s) 92, 611, 817, 1205, 1252
BseSI GKGCMC 3 cut(s) 357, 735, 956
BseXI GCAGC 4 cut(s) 373, 419, 528, 1239
BsgI GTGCAG 1 cut(s) 148
Bsh1236I CGCG 2 cut(s) 74, 1118
BshFI GGCC 5 cut(s) 5, 156, 225, 954, 1149
BsiHKAI GWGCWC 1 cut(s) 357
BsiSI CCGG 4 cut(s) 119, 153, 243, 1106
BslFI GGGAC 2 cut(s) 113, 353
BslI CCNNNNNNNGG 3 cut(s) 961, 1199, 1247
BsmAI GTCTC 1 cut(s) 184
BsmBI CGTCTC 1 cut(s) 184
BsmFI GGGAC 2 cut(s) 113, 353
BsmI GAATGC 2 cut(s) 681, 964
BsnI GGCC 5 cut(s) 5, 156, 225, 954, 1149
Bsp120I GGGCCC 1 cut(s) 952
Bsp1286I GDGCHC 3 cut(s) 357, 735, 956
Bsp13I TCCGGA 1 cut(s) 242
Bsp143I GATC 6 cut(s) 78, 148, 205, 321, 463, 543
Bsp68I TCGCGA 1 cut(s) 1118
BspACI CCGC 9 cut(s) 6, 9, 12, 74, 192, 405, 950, 962, 1043
BspANI GGCC 5 cut(s) 5, 156, 225, 954, 1149
BspCNI CTCAG 2 cut(s) 926, 940
BspEI TCCGGA 1 cut(s) 242
BspFNI CGCG 2 cut(s) 74, 1118
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 2 cut(s) 568, 954
BspPI GGATC 2 cut(s) 143, 551
BsrFI RCCGGY 1 cut(s) 118
BsrI ACTGG 5 cut(s) 92, 611, 817, 1205, 1252
BssAI RCCGGY 1 cut(s) 118
BssECI CCNNGG 3 cut(s) 15, 1104, 1193
BssMI GATC 6 cut(s) 78, 148, 205, 321, 463, 543
BssNI GRCGYC 1 cut(s) 59
Bst2UI CCWGG 3 cut(s) 227, 836, 1194
Bst4CI ACNGT 6 cut(s) 178, 575, 688, 705, 795, 1055
BstACI GRCGYC 1 cut(s) 59
BstBAI YACGTR 2 cut(s) 352, 977
BstC8I GCNNGC 5 cut(s) 289, 347, 473, 952, 1151
BstDEI CTNAG 2 cut(s) 913, 927
BstDSI CCRYGG 1 cut(s) 15
BstENI CCTNNNNNAGG 1 cut(s) 1197
BstF5I GGATG 3 cut(s) 25, 616, 872
BstFNI CGCG 2 cut(s) 74, 1118
BstHHI GCGC 2 cut(s) 55, 436
BstKTI GATC 6 cut(s) 81, 151, 208, 324, 466, 546
BstMAI GTCTC 1 cut(s) 184
BstMBI GATC 6 cut(s) 78, 148, 205, 321, 463, 543
BstMWI GCNNNNNNNGC 8 cut(s) 11, 115, 162, 395, 404, 416, 788, 1009
BstNI CCWGG 3 cut(s) 227, 836, 1194
BstNSI RCATGY 2 cut(s) 214, 846
BstSCI CCNGG 5 cut(s) 151, 225, 834, 1104, 1192
BstSFI CTRYAG 1 cut(s) 669
BstSLI GKGCMC 3 cut(s) 357, 735, 956
BstUI CGCG 2 cut(s) 74, 1118
BstV1I GCAGC 4 cut(s) 373, 419, 528, 1239
Bsu36I CCTNAGG 1 cut(s) 927
BsuI GTATCC 1 cut(s) 832
BsuRI GGCC 5 cut(s) 5, 156, 225, 954, 1149
BtgI CCRYGG 1 cut(s) 15
BtgZI GCGATG 2 cut(s) 55, 343
BtsCI GGATG 3 cut(s) 25, 616, 872
BtsI GCAGTG 1 cut(s) 511
BtsIMutI CAGTG 3 cut(s) 511, 604, 1212
BtuMI TCGCGA 1 cut(s) 1118
Cac8I GCNNGC 5 cut(s) 289, 347, 473, 952, 1151
CciI TCATGA 1 cut(s) 298
CfoI GCGC 2 cut(s) 55, 436
Cfr10I RCCGGY 1 cut(s) 118
Cfr13I GGNCC 4 cut(s) 952, 953, 1147, 1202
CseI GACGC 2 cut(s) 67, 127
Csp6I GTAC 3 cut(s) 85, 666, 804
CviAII CATG 6 cut(s) 211, 299, 547, 824, 843, 862
CviQI GTAC 3 cut(s) 85, 666, 804
DdeI CTNAG 2 cut(s) 913, 927
DpnI GATC 6 cut(s) 80, 150, 207, 323, 465, 545
DpnII GATC 6 cut(s) 78, 148, 205, 321, 463, 543
DraI TTTAAA 1 cut(s) 1083
EaeI YGGCCR 3 cut(s) 3, 154, 223
Eco24I GRGCYC 1 cut(s) 956
Eco32I GATATC 1 cut(s) 1114
Eco47I GGWCC 1 cut(s) 1202
Eco57I CTGAAG 1 cut(s) 989
Eco72I CACGTG 2 cut(s) 352, 977
Eco81I CCTNAGG 1 cut(s) 927
EcoNI CCTNNNNNAGG 1 cut(s) 1197
EcoRII CCWGG 3 cut(s) 225, 834, 1192
EcoRV GATATC 1 cut(s) 1114
EcoT38I GRGCYC 1 cut(s) 956
Esp3I CGTCTC 1 cut(s) 184
FaeI CATG 6 cut(s) 214, 302, 550, 827, 846, 865
FalI AAGNNNNNCTT 2 cut(s) 98, 130
FaqI GGGAC 2 cut(s) 113, 353
FatI CATG 6 cut(s) 210, 298, 546, 823, 842, 861
FauI CCCGC 2 cut(s) 199, 943
FbaI TGATCA 1 cut(s) 78
Fnu4HI GCNGC 7 cut(s) 6, 9, 12, 387, 408, 517, 1253
FokI GGATG 3 cut(s) 32, 623, 859
FriOI GRGCYC 1 cut(s) 956
Fsp4HI GCNGC 7 cut(s) 6, 9, 12, 387, 408, 517, 1253
GlaI GCGC 2 cut(s) 54, 435
GluI GCNGC 7 cut(s) 6, 9, 12, 387, 408, 517, 1253
GsuI CTGGAG 1 cut(s) 1119
HaeIII GGCC 5 cut(s) 5, 156, 225, 954, 1149
HapII CCGG 4 cut(s) 119, 153, 243, 1106
HgaI GACGC 2 cut(s) 67, 127
HhaI GCGC 2 cut(s) 55, 436
Hin1I GRCGYC 1 cut(s) 59
Hin1II CATG 6 cut(s) 214, 302, 550, 827, 846, 865
Hin6I GCGC 2 cut(s) 53, 434
HinP1I GCGC 2 cut(s) 53, 434
HincII GTYRAC 2 cut(s) 124, 798
HindII GTYRAC 2 cut(s) 124, 798
HindIII AAGCTT 1 cut(s) 1010
HinfI GANTC 5 cut(s) 23, 252, 280, 315, 769
HpaII CCGG 4 cut(s) 119, 153, 243, 1106
HphI GGTGA 4 cut(s) 58, 88, 190, 1079
Hpy166II GTNNAC 4 cut(s) 124, 355, 701, 798
Hpy188I TCNGA 6 cut(s) 279, 468, 916, 1008, 1039, 1219
Hpy188III TCNNGA 7 cut(s) 243, 256, 299, 319, 773, 1117, 1136
Hpy8I GTNNAC 4 cut(s) 124, 355, 701, 798
Hpy99I CGWCG 2 cut(s) 296, 692
HpyAV CCTTC 5 cut(s) 205, 325, 646, 715, 911
HpyCH4III ACNGT 6 cut(s) 178, 575, 688, 705, 795, 1055
HpyCH4IV ACGT 3 cut(s) 294, 351, 976
HpyCH4V TGCA 9 cut(s) 165, 349, 355, 488, 581, 593, 791, 974, 1185
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 115, 162, 395, 404, 416, 788, 1009
HpyF3I CTNAG 2 cut(s) 913, 927
HpySE526I ACGT 3 cut(s) 294, 351, 976
Hsp92I GRCGYC 1 cut(s) 59
Hsp92II CATG 6 cut(s) 214, 302, 550, 827, 846, 865
HspAI GCGC 2 cut(s) 53, 434
Kpn2I TCCGGA 1 cut(s) 242
Ksp22I TGATCA 1 cut(s) 78
Kzo9I GATC 6 cut(s) 78, 148, 205, 321, 463, 543
Lsp1109I GCAGC 4 cut(s) 373, 419, 528, 1239
LweI GCATC 4 cut(s) 141, 937, 1030, 1078
MaeII ACGT 3 cut(s) 294, 351, 976
MaeIII GTNAC 5 cut(s) 46, 139, 705, 977, 1172
MalI GATC 6 cut(s) 80, 150, 207, 323, 465, 545
MboI GATC 6 cut(s) 78, 148, 205, 321, 463, 543
MboII GAAGA 3 cut(s) 473, 767, 1223
MhlI GDGCHC 3 cut(s) 357, 735, 956
MluCI AATT 4 cut(s) 273, 373, 1033, 1077
MlyI GAGTC 2 cut(s) 32, 289
MroI TCCGGA 1 cut(s) 242
MseI TTAA 5 cut(s) 369, 446, 746, 1082, 1098
MslI CAYNNNNRTG 2 cut(s) 74, 609
MspA1I CMGCKG 1 cut(s) 410
MspI CCGG 4 cut(s) 119, 153, 243, 1106
MspR9I CCNGG 5 cut(s) 153, 227, 836, 1106, 1194
Mva1269I GAATGC 2 cut(s) 681, 964
MvaI CCWGG 3 cut(s) 227, 836, 1194
MvnI CGCG 2 cut(s) 74, 1118
MwoI GCNNNNNNNGC 8 cut(s) 11, 115, 162, 395, 404, 416, 788, 1009
NciI CCSGG 2 cut(s) 153, 1106
NdeII GATC 6 cut(s) 78, 148, 205, 321, 463, 543
NlaIII CATG 6 cut(s) 214, 302, 550, 827, 846, 865
NlaIV GGNNCC 2 cut(s) 568, 954
NmuCI GTSAC 3 cut(s) 46, 139, 977
NruI TCGCGA 1 cut(s) 1118
NspI RCATGY 2 cut(s) 214, 846
PagI TCATGA 1 cut(s) 298
PciI ACATGT 1 cut(s) 842
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 2 cut(s) 681, 964
PfeI GAWTC 3 cut(s) 252, 315, 769
PkrI GCNGC 7 cut(s) 7, 10, 13, 388, 409, 518, 1254
PleI GAGTC 2 cut(s) 31, 288
PmaCI CACGTG 2 cut(s) 352, 977
PmlI CACGTG 2 cut(s) 352, 977
PpsI GAGTC 2 cut(s) 31, 288
Ppu21I YACGTR 2 cut(s) 352, 977
PscI ACATGT 1 cut(s) 842
PshBI ATTAAT 1 cut(s) 1098
Psp6I CCWGG 3 cut(s) 225, 834, 1192
PspCI CACGTG 2 cut(s) 352, 977
PspGI CCWGG 3 cut(s) 225, 834, 1192
PspN4I GGNNCC 2 cut(s) 568, 954
PspOMI GGGCCC 1 cut(s) 952
PspPI GGNCC 4 cut(s) 952, 953, 1147, 1202
PvuII CAGCTG 1 cut(s) 410
RruI TCGCGA 1 cut(s) 1118
RsaI GTAC 3 cut(s) 86, 667, 805
RsaNI GTAC 3 cut(s) 85, 666, 804
RseI CAYNNNNRTG 2 cut(s) 74, 609
SaqAI TTAA 5 cut(s) 369, 446, 746, 1082, 1098
SatI GCNGC 7 cut(s) 6, 9, 12, 387, 408, 517, 1253
Sau3AI GATC 6 cut(s) 78, 148, 205, 321, 463, 543
Sau96I GGNCC 4 cut(s) 952, 953, 1147, 1202
ScaI AGTACT 2 cut(s) 86, 667
SchI GAGTC 2 cut(s) 32, 289
ScrFI CCNGG 5 cut(s) 153, 227, 836, 1106, 1194
SduI GDGCHC 3 cut(s) 357, 735, 956
SfaNI GCATC 4 cut(s) 141, 937, 1030, 1078
SfcI CTRYAG 1 cut(s) 669
SinI GGWCC 1 cut(s) 1202
SmiMI CAYNNNNRTG 2 cut(s) 74, 609
Sse9I AATT 4 cut(s) 273, 373, 1033, 1077
SsiI CCGC 9 cut(s) 6, 9, 12, 74, 192, 405, 950, 962, 1043
StyD4I CCNGG 5 cut(s) 151, 225, 834, 1104, 1192
TaaI ACNGT 6 cut(s) 178, 575, 688, 705, 795, 1055
TaiI ACGT 3 cut(s) 297, 354, 979
TaqI TCGA 3 cut(s) 283, 690, 772
TasI AATT 4 cut(s) 273, 373, 1033, 1077
TatI WGTACW 3 cut(s) 84, 665, 803
TauI GCSGC 3 cut(s) 8, 11, 14
TfiI GAWTC 3 cut(s) 252, 315, 769
Tru1I TTAA 5 cut(s) 369, 446, 746, 1082, 1098
Tru9I TTAA 5 cut(s) 369, 446, 746, 1082, 1098
TscAI CASTG 3 cut(s) 511, 611, 1212
TseFI GTSAC 3 cut(s) 46, 139, 977
TseI GCWGC 4 cut(s) 386, 407, 516, 1252
Tsp45I GTSAC 3 cut(s) 46, 139, 977
TspDTI ATGAA 5 cut(s) 287, 464, 812, 878, 1236
TspGWI ACGGA 1 cut(s) 172
TspRI CASTG 3 cut(s) 511, 611, 1212
VneI GTGCAC 1 cut(s) 353
VpaK11BI GGWCC 1 cut(s) 1202
VspI ATTAAT 1 cut(s) 1098
XagI CCTNNNNNAGG 1 cut(s) 1197
XapI RAATTY 2 cut(s) 273, 1033
XceI RCATGY 2 cut(s) 214, 846
ZrmI AGTACT 2 cut(s) 86, 667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.