prolyl 4-hydroxylase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_1G00026130 Rroxscaffold_3G00238630 Rroxscaffold_3G00238640 Rroxscaffold_4G00321640 Rroxscaffold_4G00322070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 6 |
| AccIII | TCCGGA | 2 cut(s) | 88, 274 |
| AciI | CCGC | 2 cut(s) | 41, 133 |
| AclWI | GGATC | 1 cut(s) | 234 |
| AgsI | TTSAA | 1 cut(s) | 252 |
| Alw21I | GWGCWC | 1 cut(s) | 98 |
| AlwI | GGATC | 1 cut(s) | 234 |
| Aor13HI | TCCGGA | 2 cut(s) | 88, 274 |
| AoxI | GGCC | 1 cut(s) | 66 |
| AsuHPI | GGTGA | 1 cut(s) | 269 |
| Bbv12I | GWGCWC | 1 cut(s) | 98 |
| BceAI | ACGGC | 1 cut(s) | 120 |
| BclI | TGATCA | 1 cut(s) | 259 |
| BfaI | CTAG | 1 cut(s) | 280 |
| BmsI | GCATC | 1 cut(s) | 48 |
| BsaWI | WCCGGW | 2 cut(s) | 88, 274 |
| BseAI | TCCGGA | 2 cut(s) | 88, 274 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BsiHKAI | GWGCWC | 1 cut(s) | 98 |
| BsiSI | CCGG | 2 cut(s) | 89, 275 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bsp1286I | GDGCHC | 1 cut(s) | 98 |
| Bsp13I | TCCGGA | 2 cut(s) | 88, 274 |
| Bsp143I | GATC | 4 cut(s) | 28, 118, 226, 259 |
| BspACI | CCGC | 2 cut(s) | 41, 133 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspEI | TCCGGA | 2 cut(s) | 88, 274 |
| BspPI | GGATC | 1 cut(s) | 234 |
| BssMI | GATC | 4 cut(s) | 28, 118, 226, 259 |
| Bst4CI | ACNGT | 1 cut(s) | 47 |
| Bst6I | CTCTTC | 1 cut(s) | 112 |
| BstDEI | CTNAG | 1 cut(s) | 122 |
| BstKTI | GATC | 4 cut(s) | 31, 121, 229, 262 |
| BstMBI | GATC | 4 cut(s) | 28, 118, 226, 259 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| CviAII | CATG | 3 cut(s) | 38, 144, 244 |
| CviJI | RGCY | 3 cut(s) | 68, 160, 248 |
| CviKI_1 | RGCY | 3 cut(s) | 68, 160, 248 |
| DdeI | CTNAG | 1 cut(s) | 122 |
| DpnI | GATC | 4 cut(s) | 30, 120, 228, 261 |
| DpnII | GATC | 4 cut(s) | 28, 118, 226, 259 |
| Eam1104I | CTCTTC | 1 cut(s) | 112 |
| EarI | CTCTTC | 1 cut(s) | 112 |
| EciI | GGCGGA | 1 cut(s) | 122 |
| FaeI | CATG | 3 cut(s) | 41, 147, 247 |
| FaiI | YATR | 3 cut(s) | 39, 145, 245 |
| FatI | CATG | 3 cut(s) | 37, 143, 243 |
| FbaI | TGATCA | 1 cut(s) | 259 |
| FblI | GTMKAC | 1 cut(s) | 6 |
| FspBI | CTAG | 1 cut(s) | 280 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HapII | CCGG | 2 cut(s) | 89, 275 |
| Hin1II | CATG | 3 cut(s) | 41, 147, 247 |
| HincII | GTYRAC | 1 cut(s) | 7 |
| HindII | GTYRAC | 1 cut(s) | 7 |
| HinfI | GANTC | 2 cut(s) | 75, 104 |
| HpaII | CCGG | 2 cut(s) | 89, 275 |
| HphI | GGTGA | 1 cut(s) | 269 |
| Hpy166II | GTNNAC | 2 cut(s) | 7, 13 |
| Hpy188I | TCNGA | 1 cut(s) | 74 |
| Hpy188III | TCNNGA | 4 cut(s) | 89, 252, 267, 275 |
| Hpy8I | GTNNAC | 2 cut(s) | 7, 13 |
| Hpy99I | CGWCG | 3 cut(s) | 11, 104, 224 |
| HpyAV | CCTTC | 2 cut(s) | 79, 139 |
| HpyCH4III | ACNGT | 1 cut(s) | 47 |
| HpyCH4IV | ACGT | 1 cut(s) | 9 |
| HpyF3I | CTNAG | 1 cut(s) | 122 |
| HpySE526I | ACGT | 1 cut(s) | 9 |
| Hsp92II | CATG | 3 cut(s) | 41, 147, 247 |
| Kpn2I | TCCGGA | 2 cut(s) | 88, 274 |
| Ksp22I | TGATCA | 1 cut(s) | 259 |
| Kzo9I | GATC | 4 cut(s) | 28, 118, 226, 259 |
| LpnPI | CCDG | 1 cut(s) | 102 |
| LweI | GCATC | 1 cut(s) | 48 |
| MaeI | CTAG | 1 cut(s) | 280 |
| MaeII | ACGT | 1 cut(s) | 9 |
| MalI | GATC | 4 cut(s) | 30, 120, 228, 261 |
| MboI | GATC | 4 cut(s) | 28, 118, 226, 259 |
| MboII | GAAGA | 1 cut(s) | 99 |
| MhlI | GDGCHC | 1 cut(s) | 98 |
| MlyI | GAGTC | 1 cut(s) | 98 |
| MnlI | CCTC | 5 cut(s) | 150, 166, 217, 223, 248 |
| MroI | TCCGGA | 2 cut(s) | 88, 274 |
| MspI | CCGG | 2 cut(s) | 89, 275 |
| NdeII | GATC | 4 cut(s) | 28, 118, 226, 259 |
| NlaIII | CATG | 3 cut(s) | 41, 147, 247 |
| PfeI | GAWTC | 1 cut(s) | 75 |
| PleI | GAGTC | 1 cut(s) | 98 |
| PpsI | GAGTC | 1 cut(s) | 98 |
| SalI | GTCGAC | 1 cut(s) | 5 |
| Sau3AI | GATC | 4 cut(s) | 28, 118, 226, 259 |
| SchI | GAGTC | 1 cut(s) | 98 |
| SduI | GDGCHC | 1 cut(s) | 98 |
| SetI | ASST | 3 cut(s) | 12, 215, 259 |
| SfaNI | GCATC | 1 cut(s) | 48 |
| SsiI | CCGC | 2 cut(s) | 41, 133 |
| SspMI | CTAG | 1 cut(s) | 280 |
| TaaI | ACNGT | 1 cut(s) | 47 |
| TaiI | ACGT | 1 cut(s) | 12 |
| TaqI | TCGA | 4 cut(s) | 6, 27, 56, 222 |
| TfiI | GAWTC | 1 cut(s) | 75 |
| TspDTI | ATGAA | 1 cut(s) | 26 |
| XmiI | GTMKAC | 1 cut(s) | 6 |
| XspI | CTAG | 1 cut(s) | 280 |