Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0009570

Physical Location & Seq

Genomic Coordinates Reverse (-)

5220229 .. 5234878

Gene Structure 14650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00337190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGGGGTTCTTCTCCTTCTTCGGCCGCGTCCTCTTCGCCTCCATCTTCATCCTCTCCGCTTGGCAAGCTTTCAAAAGTAAGGTTAATGAACAGGTGTTCAATGAATTTGAATTGGAGCTTGTGGTTGGCAAACCGCAGAGCTCCAACCTCGTCAATAGGCCTTGCTTCACAGGACACCCTCTTGAATTCCCTCATTGCATTGCTAGACACACCACACAAGTGCCCAAGATCAATGTTCAAGACCAGATGCTTAATACTCCAGTTACTACTGCACAGTACATGGAGCGCGAAAAGGCGTATGATAAAATTGCCACCGCGTTGAAGATACCGTTTCTTGATGAAGAGATTGCTAAGAATTCATTCCCACGCAAGATGGGACGTATTGATGGAAACAATCCACAGAGTAGTAGAAAGGAAGCAGCATTTGACTGGACAGATGTGTATGAAAGGGACTCTAATTTGACACCTGCATTAGAAAGTTCAGAGGATAGAGCCACAACTAAAGAGGTCATGGACCAAGACCAGCATGACGATGCAAATGCTGAGAAGCTTGGTTCTAGCAAACACCAATACAGAGAGTTCATTTTTGGTGAGGAAGCACTAAAAGTATCTCCCATGGCGCCATATACATTACGTCGTCCTATTCGCAGAGGCCATCTAAATATATCACAACATTATCCCATGCAGCAGGTATTTGAGGATGTGCTTGCTATTTGGGACTTCATTTTGACGGAGAAGTTGCACATCCCTTTAAGTGAAAGAAGCATGTATTCTGCTCTTCTTGTCCTGCCAGAAACATTTGATAGTCGAGAAATAAAGGAATTGTTGTCTGTAGTCTTGCGAGACTTGCGTTTCAGCTTTGCAGTGGTTCACCAGGAAGGTCTAGCTGCAGCTTTTGGGAATGGGTTATCAACAGGATGTATTGTTAGCATGGGTGCTCAGGTGACATCAGTTATTTGCATTGAGGATGGAGTAGCTTTACCTACCACACAGAAAACCTTACCTTTCGGTGGAGAGGATATATCAAGATGCCTTCTTTGGACTCAGAGACATCATCAGACATGGCCACAAATTCGTACTGACTTGTACACAAAGCCTATAGATCTCTTGATGCTTAACAGACTAAAGGAGTCTTATTGTGAGATTAAAGAGGGGAAACTTGAAGCTGTCGCTGTAGTTCATTCTTATGAAGATGGCATGCCAGCTGGATCTCATAAGACAAGCCTAACTGCTCTTAATGTCCCTCCAATGGGTTTGTTCCATCCGATGCTTTTGGTTCCAGATGCATACCCACCACCACCTAGAGTTTGGTTTCTTGACTATGAGGACATGCTGGAAGATACATGGCACATGGAATATCCGAGAAGACCTGAAATGTCAGAAGGACTGTATCCCAGCATGAATGTTGGGTATCCAATGTGGGATAGCTACCCAGTTTATGCAGTTAAACCAAAGAAAGAAGAGAAGGTTGGCCTTGCAGAAGCCATAACGAGGAGCATCCTTTCAACAGGACGTTTAGACCTCCAAAGAAAGTTGTTTTCTAGTATACAATTGATTGGAGGAGTGGCTTTAACAAGAGGTCTTGTTCCTGCAGTGGAGGAGAGGGTTTTACTTGCAATTCCTTCAACTGAAGCAATTGATAGGGTTGAGGTCTTGCAATCAAGAGGCAATCCAACTTTTGTACCGTGGAAAGGTGGAGCGATCCTTGGAATTCTTGACTTTGCTCGAGATGGGTGGCTACGTCGTGAGGAGTGGATTCAAAATGGAGTTCGCGTTGGAAAGGGAAGAAAGTACAAGGACTCCCATTTCCTTGAAGCACAGGCAATGTATTACATTAATTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Actin

Protein Analysis

614

Amino Acids

69.81

Weight (kDa)

5.95

Isoelectric Point (pI)

44.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HR_lesion	PF05514	1 - 26	3.7e-06	HR-like lesion-inducing
Actin	PF00022	107 - 592	2.9e-26	Actin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43500 AT5G43500 AT5G43500 AT5G43500
fragaria_vesca	FvH4_4g03210
malus_domestica	MD13G1210600.v1.1 MD16G1213700.v1.1
prunus_persica	Prupe.1G035000_v2.0.a1 Prupe.1G035000_v2.0.a1 Prupe.1G035000_v2.0.a1 Prupe.1G035000_v2.0.a1
pyrus_communis	pycom13g18300
rosa_chinensis	RchiOBHm_Chr4g0391871
rosa_laevigata	RLG00000009853
rosa_multiflora	Rmu_sc0007693.1_g000009
rosa_roxburghii	Rroxscaffold_5G00337190
rosa_rugosa	Rorug03G0336600
rosa_samantha	Rh4AG039000 Rh4BG033600 Rh4CG041600 Rh4DG036500
rosa_wichuraiana	Rw4G003040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	475
Acc36I	ACCTGC	2 cut(s)	475, 679
AccB1I	GGYRCC	1 cut(s)	619
AccI	GTMKAC	1 cut(s)	1546
AccII	CGCG	4 cut(s)	27, 288, 317, 1773
AciI	CCGC	4 cut(s)	25, 57, 134, 315
AclWI	GGATC	2 cut(s)	1216, 1696
AcoI	YGGCCR	2 cut(s)	22, 1064
AcsI	RAATTY	5 cut(s)	104, 185, 355, 1071, 1710
AcuI	CTGAAG	1 cut(s)	1650
AcyI	GRCGYC	1 cut(s)	620
AfaI	GTAC	5 cut(s)	278, 1078, 1088, 1683, 1793
AfiI	CCNNNNNNNGG	5 cut(s)	1010, 1249, 1250, 1491, 1691
AjnI	CCWGG	1 cut(s)	873
AjuI	GAANNNNNNNTTGG	2 cut(s)	1452, 1484
AleI	CACNNNNGTG	1 cut(s)	218
Alw21I	GWGCWC	2 cut(s)	143, 940
Alw26I	GTCTC	2 cut(s)	837, 1042
AlwI	GGATC	2 cut(s)	1216, 1696
Ama87I	CYCGRG	1 cut(s)	1725
AoxI	GGCC	5 cut(s)	22, 158, 652, 1064, 1471
ApeKI	GCWGC	4 cut(s)	419, 685, 887, 890
ApoI	RAATTY	5 cut(s)	104, 185, 355, 1071, 1710
AseI	ATTAAT	1 cut(s)	1836
Asp700I	GAANNNNTTC	1 cut(s)	359
AspLEI	GCGC	2 cut(s)	288, 622
AspS9I	GGNCC	1 cut(s)	514
AsuHPI	GGTGA	3 cut(s)	602, 863, 955
AvaI	CYCGRG	1 cut(s)	1725
AvaII	GGWCC	1 cut(s)	514
BaeGI	GKGCMC	1 cut(s)	225
BaeI	ACNNNNGTAYC	2 cut(s)	1665, 1698
BalI	TGGCCA	1 cut(s)	1066
BanI	GGYRCC	1 cut(s)	619
BanII	GRGCYC	1 cut(s)	143
BbsI	GAAGAC	1 cut(s)	1372
Bbv12I	GWGCWC	2 cut(s)	143, 940
BbvI	GCAGC	4 cut(s)	431, 697, 874, 902
BccI	CCATC	8 cut(s)	50, 367, 380, 663, 962, 1187, 1269, 1724
BcgI	CGANNNNNNTGC	2 cut(s)	521, 555
BciT130I	CCWGG	1 cut(s)	875
BciVI	GTATCC	2 cut(s)	1401, 1422
BcoDI	GTCTC	2 cut(s)	837, 1042
BfaI	CTAG	5 cut(s)	204, 558, 884, 1302, 1542
BfmI	CTRYAG	5 cut(s)	831, 888, 1098, 1173, 1590
BfoI	RGCGCY	1 cut(s)	623
BfuAI	ACCTGC	2 cut(s)	475, 679
BfuI	GTATCC	2 cut(s)	1401, 1422
BglII	AGATCT	1 cut(s)	1102
BisI	GCNGC	5 cut(s)	25, 420, 686, 888, 891
BlsI	GCNGC	5 cut(s)	26, 421, 687, 889, 892
Bme1390I	CCNGG	1 cut(s)	875
Bme18I	GGWCC	1 cut(s)	514
BmeT110I	CYCGRG	1 cut(s)	1725
BmgT120I	GGNCC	1 cut(s)	514
BmiI	GGNNCC	2 cut(s)	621, 1278
BmrFI	CCNGG	1 cut(s)	875
BmrI	ACTGGG	1 cut(s)	1427
BmsI	GCATC	7 cut(s)	237, 523, 1019, 1101, 1257, 1273, 1506
BmuI	ACTGGG	1 cut(s)	1427
BpiI	GAAGAC	1 cut(s)	1372
BpmI	CTGGAG	1 cut(s)	243
Bpu10I	CCTNAGC	1 cut(s)	939
BsaHI	GRCGYC	1 cut(s)	620
BsaJI	CCNNGG	3 cut(s)	615, 1685, 1705
BsaXI	ACNNNNNCTCC	4 cut(s)	1758, 1784, 1788, 1814
Bsc4I	CCNNNNNNNGG	5 cut(s)	1010, 1249, 1250, 1491, 1691
Bse1I	ACTGG	3 cut(s)	260, 434, 1433
Bse3DI	GCAATG	3 cut(s)	193, 198, 1830
BseBI	CCWGG	1 cut(s)	875
BseDI	CCNNGG	3 cut(s)	615, 1685, 1705
BseGI	GGATG	7 cut(s)	48, 706, 744, 923, 973, 1261, 1497
BseLI	CCNNNNNNNGG	5 cut(s)	1010, 1249, 1250, 1491, 1691
BseMI	GCAATG	3 cut(s)	193, 198, 1830
BseMII	CTCAG	3 cut(s)	534, 953, 1058
BseNI	ACTGG	3 cut(s)	260, 434, 1433
BseRI	GAGGAG	4 cut(s)	1507, 1575, 1613, 1763
BseSI	GKGCMC	1 cut(s)	225
BseX3I	CGGCCG	1 cut(s)	22
BseXI	GCAGC	4 cut(s)	431, 697, 874, 902
BseYI	CCCAGC	1 cut(s)	1394
BsgI	GTGCAG	1 cut(s)	255
Bsh1236I	CGCG	4 cut(s)	27, 288, 317, 1773
Bsh1285I	CGRYCG	1 cut(s)	25
BshFI	GGCC	5 cut(s)	24, 160, 654, 1066, 1473
BshNI	GGYRCC	1 cut(s)	619
BsiEI	CGRYCG	1 cut(s)	25
BsiHKAI	GWGCWC	2 cut(s)	143, 940
BsiHKCI	CYCGRG	1 cut(s)	1725
BslFI	GGGAC	4 cut(s)	390, 464, 731, 1226
BslI	CCNNNNNNNGG	5 cut(s)	1010, 1249, 1250, 1491, 1691
BsmAI	GTCTC	2 cut(s)	837, 1042
BsmFI	GGGAC	4 cut(s)	390, 464, 731, 1226
BsnI	GGCC	5 cut(s)	24, 160, 654, 1066, 1473
BsoBI	CYCGRG	1 cut(s)	1725
Bsp1286I	GDGCHC	3 cut(s)	143, 225, 940
Bsp1407I	TGTACA	1 cut(s)	1086
Bsp143I	GATC	4 cut(s)	228, 1102, 1208, 1701
Bsp19I	CCATGG	1 cut(s)	615
BspACI	CCGC	4 cut(s)	25, 57, 134, 315
BspANI	GGCC	5 cut(s)	24, 160, 654, 1066, 1473
BspCNI	CTCAG	3 cut(s)	535, 952, 1057
BspFNI	CGCG	4 cut(s)	27, 288, 317, 1773
BspLI	GGNNCC	2 cut(s)	621, 1278
BspMAI	CTGCAG	2 cut(s)	892, 1594
BspMI	ACCTGC	2 cut(s)	475, 679
BspPI	GGATC	2 cut(s)	1216, 1696
BspQI	GCTCTTC	1 cut(s)	783
BspT107I	GGYRCC	1 cut(s)	619
BsrDI	GCAATG	3 cut(s)	193, 198, 1830
BsrGI	TGTACA	1 cut(s)	1086
BsrI	ACTGG	3 cut(s)	260, 434, 1433
BssECI	CCNNGG	3 cut(s)	615, 1685, 1705
BssMI	GATC	4 cut(s)	228, 1102, 1208, 1701
BssNAI	GTATAC	1 cut(s)	1547
BssNI	GRCGYC	1 cut(s)	620
BssT1I	CCWWGG	2 cut(s)	615, 1705
Bst1107I	GTATAC	1 cut(s)	1547
Bst2UI	CCWGG	1 cut(s)	875
Bst4CI	ACNGT	4 cut(s)	276, 330, 1389, 1686
Bst6I	CTCTTC	4 cut(s)	38, 336, 783, 1455
BstACI	GRCGYC	1 cut(s)	620
BstAUI	TGTACA	1 cut(s)	1086
BstC8I	GCNNGC	4 cut(s)	66, 708, 1199, 1203
BstDEI	CTNAG	4 cut(s)	351, 543, 939, 1044
BstDSI	CCRYGG	2 cut(s)	615, 1685
BstF5I	GGATG	7 cut(s)	48, 706, 744, 923, 973, 1261, 1497
BstFNI	CGCG	4 cut(s)	27, 288, 317, 1773
BstH2I	RGCGCY	1 cut(s)	623
BstHHI	GCGC	2 cut(s)	288, 622
BstKTI	GATC	4 cut(s)	231, 1105, 1211, 1704
BstMAI	GTCTC	2 cut(s)	837, 1042
BstMBI	GATC	4 cut(s)	228, 1102, 1208, 1701
BstMCI	CGRYCG	1 cut(s)	25
BstMWI	GCNNNNNNNGC	2 cut(s)	65, 847
BstNI	CCWGG	1 cut(s)	875
BstNSI	RCATGY	3 cut(s)	769, 1201, 1333
BstSCI	CCNGG	1 cut(s)	873
BstSFI	CTRYAG	5 cut(s)	831, 888, 1098, 1173, 1590
BstSLI	GKGCMC	1 cut(s)	225
BstUI	CGCG	4 cut(s)	27, 288, 317, 1773
BstV1I	GCAGC	4 cut(s)	431, 697, 874, 902
BstV2I	GAAGAC	1 cut(s)	1372
BstX2I	RGATCY	2 cut(s)	1102, 1208
BstYI	RGATCY	2 cut(s)	1102, 1208
BstZ17I	GTATAC	1 cut(s)	1547
BstZI	CGGCCG	1 cut(s)	22
BsuI	GTATCC	2 cut(s)	1401, 1422
BsuRI	GGCC	5 cut(s)	24, 160, 654, 1066, 1473
BtgI	CCRYGG	2 cut(s)	615, 1685
BtsCI	GGATG	7 cut(s)	48, 706, 744, 923, 973, 1261, 1497
BtsI	GCAGTG	2 cut(s)	870, 1599
BtsIMutI	CAGTG	2 cut(s)	870, 1599
BveI	ACCTGC	2 cut(s)	475, 679
Cac8I	GCNNGC	4 cut(s)	66, 708, 1199, 1203
CfoI	GCGC	2 cut(s)	288, 622
Cfr13I	GGNCC	1 cut(s)	514
CseI	GACGC	1 cut(s)	16
Csp6I	GTAC	5 cut(s)	277, 1077, 1087, 1682, 1792
CviQI	GTAC	5 cut(s)	277, 1077, 1087, 1682, 1792
DdeI	CTNAG	4 cut(s)	351, 543, 939, 1044
DinI	GGCGCC	1 cut(s)	621
DpnI	GATC	4 cut(s)	230, 1104, 1210, 1703
DpnII	GATC	4 cut(s)	228, 1102, 1208, 1701
EaeI	YGGCCR	2 cut(s)	22, 1064
EagI	CGGCCG	1 cut(s)	22
Eam1104I	CTCTTC	4 cut(s)	38, 336, 783, 1455
EarI	CTCTTC	4 cut(s)	38, 336, 783, 1455
Ecl136II	GAGCTC	1 cut(s)	141
EclXI	CGGCCG	1 cut(s)	22
Eco130I	CCWWGG	2 cut(s)	615, 1705
Eco147I	AGGCCT	1 cut(s)	160
Eco24I	GRGCYC	1 cut(s)	143
Eco47I	GGWCC	1 cut(s)	514
Eco52I	CGGCCG	1 cut(s)	22
Eco53kI	GAGCTC	1 cut(s)	141
Eco57I	CTGAAG	1 cut(s)	1650
Eco88I	CYCGRG	1 cut(s)	1725
EcoICRI	GAGCTC	1 cut(s)	141
EcoRI	GAATTC	3 cut(s)	185, 355, 1710
EcoRII	CCWGG	1 cut(s)	873
EcoT14I	CCWWGG	2 cut(s)	615, 1705
EcoT22I	ATGCAT	1 cut(s)	1288
EcoT38I	GRGCYC	1 cut(s)	143
EgeI	GGCGCC	1 cut(s)	621
EheI	GGCGCC	1 cut(s)	621
ErhI	CCWWGG	2 cut(s)	615, 1705
FaqI	GGGAC	4 cut(s)	390, 464, 731, 1226
FblI	GTMKAC	1 cut(s)	1546
Fnu4HI	GCNGC	5 cut(s)	25, 420, 686, 888, 891
FokI	GGATG	7 cut(s)	35, 713, 731, 930, 980, 1248, 1484
FriOI	GRGCYC	1 cut(s)	143
Fsp4HI	GCNGC	5 cut(s)	25, 420, 686, 888, 891
FspBI	CTAG	5 cut(s)	204, 558, 884, 1302, 1542
GlaI	GCGC	2 cut(s)	287, 621
GluI	GCNGC	5 cut(s)	25, 420, 686, 888, 891
GsaI	CCCAGC	1 cut(s)	1398
GsuI	CTGGAG	1 cut(s)	243
HaeII	RGCGCY	1 cut(s)	623
HaeIII	GGCC	5 cut(s)	24, 160, 654, 1066, 1473
HgaI	GACGC	1 cut(s)	16
HhaI	GCGC	2 cut(s)	288, 622
Hin1I	GRCGYC	1 cut(s)	620
Hin6I	GCGC	2 cut(s)	286, 620
HinP1I	GCGC	2 cut(s)	286, 620
HindIII	AAGCTT	2 cut(s)	66, 548
HinfI	GANTC	5 cut(s)	452, 1042, 1130, 1756, 1799
HphI	GGTGA	3 cut(s)	602, 863, 955
Hpy166II	GTNNAC	3 cut(s)	871, 1089, 1547
Hpy188I	TCNGA	6 cut(s)	484, 1047, 1059, 1266, 1362, 1381
Hpy8I	GTNNAC	3 cut(s)	871, 1089, 1547
Hpy99I	CGWCG	2 cut(s)	639, 1746
HpyAV	CCTTC	6 cut(s)	25, 872, 1043, 1376, 1459, 1632
HpyCH4III	ACNGT	4 cut(s)	276, 330, 1389, 1686
HpyCH4IV	ACGT	4 cut(s)	379, 634, 1513, 1741
HpyF10VI	GCNNNNNNNGC	2 cut(s)	65, 847
HpyF3I	CTNAG	4 cut(s)	351, 543, 939, 1044
HpySE526I	ACGT	4 cut(s)	379, 634, 1513, 1741
Hsp92I	GRCGYC	1 cut(s)	620
HspAI	GCGC	2 cut(s)	286, 620
KasI	GGCGCC	1 cut(s)	619
Kzo9I	GATC	4 cut(s)	228, 1102, 1208, 1701
LguI	GCTCTTC	1 cut(s)	783
LmnI	GCTCC	5 cut(s)	115, 146, 283, 1494, 1697
Lsp1109I	GCAGC	4 cut(s)	431, 697, 874, 902
LweI	GCATC	7 cut(s)	237, 523, 1019, 1101, 1257, 1273, 1506
MaeI	CTAG	5 cut(s)	204, 558, 884, 1302, 1542
MaeII	ACGT	4 cut(s)	379, 634, 1513, 1741
MaeIII	GTNAC	2 cut(s)	262, 943
MalI	GATC	4 cut(s)	230, 1104, 1210, 1703
MboI	GATC	4 cut(s)	228, 1102, 1208, 1701
MfeI	CAATTG	2 cut(s)	1550, 1635
MflI	RGATCY	2 cut(s)	1102, 1208
MhlI	GDGCHC	3 cut(s)	143, 225, 940
MlsI	TGGCCA	1 cut(s)	1066
MluNI	TGGCCA	1 cut(s)	1066
Mly113I	GGCGCC	1 cut(s)	620
MlyI	GAGTC	4 cut(s)	446, 1036, 1139, 1793
MmeI	TCCRAC	3 cut(s)	168, 1697, 1756
Mox20I	TGGCCA	1 cut(s)	1066
Mph1103I	ATGCAT	1 cut(s)	1288
MroXI	GAANNNNTTC	1 cut(s)	359
MscI	TGGCCA	1 cut(s)	1066
MseI	TTAA	9 cut(s)	84, 252, 752, 1116, 1146, 1236, 1446, 1571, 1836
MslI	CAYNNNNRTG	3 cut(s)	218, 531, 1185
Msp20I	TGGCCA	1 cut(s)	1066
MspA1I	CMGCKG	1 cut(s)	1205
MspR9I	CCNGG	1 cut(s)	875
MunI	CAATTG	2 cut(s)	1550, 1635
MvaI	CCWGG	1 cut(s)	875
MvnI	CGCG	4 cut(s)	27, 288, 317, 1773
MwoI	GCNNNNNNNGC	2 cut(s)	65, 847
NarI	GGCGCC	1 cut(s)	620
NcoI	CCATGG	1 cut(s)	615
NdeII	GATC	4 cut(s)	228, 1102, 1208, 1701
NlaIV	GGNNCC	2 cut(s)	621, 1278
NmuCI	GTSAC	1 cut(s)	943
NsiI	ATGCAT	1 cut(s)	1288
NspI	RCATGY	3 cut(s)	769, 1201, 1333
OliI	CACNNNNGTG	1 cut(s)	218
PaeI	GCATGC	1 cut(s)	1201
PaeR7I	CTCGAG	1 cut(s)	1725
PaqCI	CACCTGC	1 cut(s)	475
PceI	AGGCCT	1 cut(s)	160
PciSI	GCTCTTC	1 cut(s)	783
PdmI	GAANNNNTTC	1 cut(s)	359
PfeI	GAWTC	1 cut(s)	1756
PkrI	GCNGC	5 cut(s)	26, 421, 687, 889, 892
PleI	GAGTC	4 cut(s)	446, 1036, 1138, 1793
PluTI	GGCGCC	1 cut(s)	623
PpsI	GAGTC	4 cut(s)	446, 1036, 1138, 1793
PshBI	ATTAAT	1 cut(s)	1836
Psp124BI	GAGCTC	1 cut(s)	143
Psp6I	CCWGG	1 cut(s)	873
PspFI	CCCAGC	1 cut(s)	1394
PspGI	CCWGG	1 cut(s)	873
PspN4I	GGNNCC	2 cut(s)	621, 1278
PspPI	GGNCC	1 cut(s)	514
PstI	CTGCAG	2 cut(s)	892, 1594
PsuI	RGATCY	2 cut(s)	1102, 1208
PvuII	CAGCTG	1 cut(s)	1205
RsaI	GTAC	5 cut(s)	278, 1078, 1088, 1683, 1793
RsaNI	GTAC	5 cut(s)	277, 1077, 1087, 1682, 1792
RseI	CAYNNNNRTG	3 cut(s)	218, 531, 1185
SacI	GAGCTC	1 cut(s)	143
SapI	GCTCTTC	1 cut(s)	783
SaqAI	TTAA	9 cut(s)	84, 252, 752, 1116, 1146, 1236, 1446, 1571, 1836
SatI	GCNGC	5 cut(s)	25, 420, 686, 888, 891
Sau3AI	GATC	4 cut(s)	228, 1102, 1208, 1701
Sau96I	GGNCC	1 cut(s)	514
SchI	GAGTC	4 cut(s)	446, 1036, 1139, 1793
ScrFI	CCNGG	1 cut(s)	875
SduI	GDGCHC	3 cut(s)	143, 225, 940
SfaNI	GCATC	7 cut(s)	237, 523, 1019, 1101, 1257, 1273, 1506
SfcI	CTRYAG	5 cut(s)	831, 888, 1098, 1173, 1590
SfoI	GGCGCC	1 cut(s)	621
Sfr274I	CTCGAG	1 cut(s)	1725
SinI	GGWCC	1 cut(s)	514
SlaI	CTCGAG	1 cut(s)	1725
SmiMI	CAYNNNNRTG	3 cut(s)	218, 531, 1185
SmlI	CTYRAG	1 cut(s)	1725
SmoI	CTYRAG	1 cut(s)	1725
SphI	GCATGC	1 cut(s)	1201
SseBI	AGGCCT	1 cut(s)	160
SsiI	CCGC	4 cut(s)	25, 57, 134, 315
SspDI	GGCGCC	1 cut(s)	619
SspMI	CTAG	5 cut(s)	204, 558, 884, 1302, 1542
SstI	GAGCTC	1 cut(s)	143
StuI	AGGCCT	1 cut(s)	160
StyD4I	CCNGG	1 cut(s)	873
StyI	CCWWGG	2 cut(s)	615, 1705
TaaI	ACNGT	4 cut(s)	276, 330, 1389, 1686
TaiI	ACGT	4 cut(s)	382, 637, 1516, 1744
TaqI	TCGA	2 cut(s)	808, 1726
TatI	WGTACW	3 cut(s)	276, 1086, 1791
TauI	GCSGC	1 cut(s)	27
TfiI	GAWTC	1 cut(s)	1756
Tru1I	TTAA	9 cut(s)	84, 252, 752, 1116, 1146, 1236, 1446, 1571, 1836
Tru9I	TTAA	9 cut(s)	84, 252, 752, 1116, 1146, 1236, 1446, 1571, 1836
TscAI	CASTG	2 cut(s)	870, 1599
TseFI	GTSAC	1 cut(s)	943
TseI	GCWGC	4 cut(s)	419, 685, 887, 890
Tsp45I	GTSAC	1 cut(s)	943
TspGWI	ACGGA	1 cut(s)	746
TspRI	CASTG	2 cut(s)	870, 1599
VpaK11BI	GGWCC	1 cut(s)	514
VspI	ATTAAT	1 cut(s)	1836
XapI	RAATTY	5 cut(s)	104, 185, 355, 1071, 1710
XceI	RCATGY	3 cut(s)	769, 1201, 1333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1305
XhoI	CTCGAG	1 cut(s)	1725
XmiI	GTMKAC	1 cut(s)	1546
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	5 cut(s)	204, 558, 884, 1302, 1542
Zsp2I	ATGCAT	1 cut(s)	1288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.