Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0011324

Physical Location & Seq

Genomic Coordinates Reverse (-)

7640014 .. 7644501

Gene Structure 4488 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00339300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGGCTCCGACCCCTTCTTCCTCCAAATCCAATCACACCCACCACCAAACCCTAACCAAAACCCCACAATCCCGCCACCGCCTCCAGTTCTTGAAATCCCACCCTTCCCCCAACCCCACCTCAGCCCTAAGAGAATCTCCGGCCGAGCACCCCGTCGAAGTCCTCGCCCGGATCCGAGACTACCCAGAATCCAAAGACCCACAACCGCCCGCCCCGGTCCTCCAAATCAATCCACAAAAACAGAGCATTCGGGTCCGGGCCGATTTCGGGTACCGGGATTTCACTCTGGATGGGGTTTCGGAGTCTGAAAGCGACGATCTTGGAGCATTCTACAGCAAATTCGTGCAGTCGAGGATTGATAGCGTGAAGATGGGGGAGAAATGTACTATTATGATGTATGGGCCAACTGGGTCTGGGAAGAGTCACACCATGTTTGGGTGCTGCAAGCAACCAGGGATTGTGTATAGGTCGTTGAAGGATATTTTGGGTGATGGAGAAGATTGTGTGGGGACGTTTGTGCAGGTCACGGTTTTGGAGATTTATAATGAGGAGATTTATGATCTGTTGTCTAGTAATGGTGGTGGGGGGTTTGGGTTTGGATGGCCTAGAGGAAATGGGTCCAATTCTAAGGTTAGACTTGAAGTAATGGGAAAGAAGGCAAAGAACGCAACCTACATTTCTGGAAATGAAGCTGGAAAAATTTCGAAAGAGATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAGAGTACCCTTTGCAATGAAAGAAGTTCTCGGAGCCATTGCATGATAATTCTTGATGTCCCAACAGTGGGTGGGCGCTTGATGCTTGTTGACATGGCTGGTTCTGAAAATATTGAGCAAGCTGGACAAATTGGCTTTGAGGCAAAAATGCAGACTGGAAAGATCAACCAAGGAAACATAGCACTAAAAAGAGTGGTTGAATCCATTGCAAATGGTGATTCACATGTGCCTTTCAGAGACAGCAAGCTTACCATGCTTCTACAGGTGTTTTTTGTTCTTCCTGTACAGGACTCTTTTGAGGATGACAAGACAAAAATTTTAATGGTGCTGTGTGCAAGCCCAGATCCCAAGGAGATACACAAGACAATCTCCACCCTTGAATATGGCGCAAAAGCAAAATGTATAGTCCGTGGTCCTCATACGCCAATTAAGGATAAGGCTGGGACTGAAGATTCATCTGCAGTCATTTTAGGATCGAGGATTGCTGCCATGGATGAATTTATCCTGAAACTACAAAAGGAGAACAAGCTGAAAGAAAAGGAGCGAAGTGAAGCTCATAAGCAGCTACTGAAGAAAGAAGAAGAGGTTGCTGCATTGAGAGCTAAACTTCAGTCAATGGAAGGGAAGGGATCTGGAGCAAAAGAGGAAGAAATCAACTTGAAGGTGAATGAAGTAGCCCAGACTCTGAAACAGGAGTTGGAAAAGAAGTTGGAGGAGTGCCAGAGAATGGCCAATGAGTTTGTTGAATTGGAGAGGAGGAGAATGGAAGAAAGGATATTGCAACAGCAACAAGAAGTTGAAATGTTGAGGAAGCGGTTGGAGGAAATTGAGTTTGAGCTATGCCGCTCAAGTGATGGAAATGGCGTGGAGAGTGGGAGAAAGGACAATGATGGAATCCAGTTTGCCAAAAGGTTGATGGGGATCTATTCCAGTGATGGTGCTGGGATGATGAAGTCAATGGACATGGTGAAGTCCATGGATTTGGACATGGATGATCAAGAACCTTTTGCTGGTGTGGTGAAATATGTAGGTGTGAACTGCGGCGGGGTAACTGGGGCTTATCAATCTGACAGCAATAGTGTTCAAGGATTTGTGAATCAGCCTCAATTAAATGCCATTGCTACAGAGAATAATGATTCCTTTGCAGCAAAATATGCTGACAGGGTATGCCTCAGCACTGTTTTTGAGGAAGAAGAAATGGAAGAGGAAGAACGTAAGGAGAATGTGGATGTTGAAGAAGTGGAGAAAGAAGTTATAGAGGAAAAGAGAGTGTGTATGGTTGATAGGTCTAACCTCAAAAGTAATTATAGTCTGGGCTCCTTGGTATCTTTACCTCATGATTATCAGCACACACCAACTTTGAATCAGCCAAGCAGAAATGTAGGGGAAGAAGATGGCAAGGGAGGACCAGACGATAGGCTTGTTAGAATCCGGAACATATTTACACTCTGTGGAAACTACAGAGAGCTCTCTCAACACATCACAAGTCCAGCACCTACTCTGAAGCCACTTGCATCATTCGAATCAGAAAATGAAAAGAAACTGACAGAAATAGATGTACACAAAAACAATGAGACGCCATTGGCTTCCAAGGAGAACTACAACCCGTCAAATGATGGCACTGATGCAGATTGTGAAGTGTATGTGAAATGGGAGTCCTCTAAAGAAAATCCAGGGAAGTTCATTACAACTCTTAGGGTTGTAAAAGATGCAAGCCTTGCTGACCTGCGAAAGCTTATTGAAATCTATCTTGGTGCAGATAATCAAGCTTTCAACTTTCTCGTGCTTGGGGATCCCACTGGAGCTGCAGTACCAAGGGAGAAGGAAGCAACAATACAGACGACTAAGCTTCCCCTTTGCAATGGTGAAACCAATGGATACTTGGCTTGCTTGAGACCTTTGAAGGGAACACAGGGAATGCAATGTAGCCCAATTCAGCAGCTCCCATTGACTCCTCTCCCCTTGAGCTCACTGGAGAACAGACTACCAGTCACCCCAACAACTTGCTTAACACCAAAAGTAGCACCAAACTTAGGTTCTACTCCTTTTATTACAGTCAGAAGATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0008017 GO:0008092 GO:0008150 GO:0008574 GO:0009524 GO:0009987 GO:0010970 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030705 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0047496 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0072384 GO:0099111 GO:0099518 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

936

Amino Acids

103.97

Weight (kDa)

5.81

Isoelectric Point (pI)

51.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	74 - 189	3.3e-08	Microtubule binding
Kinesin	PF00225	79 - 382	1.4e-56	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14330
fragaria_vesca	FvH4_4g04000 FvH4_4g04000
malus_domestica	MD13G1216300.v1.1 MD16G1221700.v1.1
prunus_persica	Prupe.1G042100_v2.0.a1 Prupe.4G184200_v2.0.a1
pyrus_communis	pycom13g18980 pycom16g18590
rosa_chinensis	RchiOBHm_Chr4g0394251
rosa_laevigata	RLG00000009711
rosa_multiflora	Rmu_sc0007246.1_g000005 Rmu_ssc0000473.1_g000031
rosa_roxburghii	Rroxscaffold_5G00339300
rosa_rugosa	Rorug03G0368300.1
rosa_samantha	Rh4AG051100 Rh4BG048100 Rh4CG054800 Rh4DG047800
rosa_wichuraiana	Rw4G004070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	543
Acc36I	ACCTGC	2 cut(s)	511, 2475
Acc65I	GGTACC	1 cut(s)	270
AccB1I	GGYRCC	1 cut(s)	270
AccB7I	CCANNNNNTGG	1 cut(s)	1468
AccBSI	CCGCTC	1 cut(s)	1587
AccIII	TCCGGA	1 cut(s)	2172
AciI	CCGC	8 cut(s)	73, 79, 206, 210, 1555, 1585, 1782, 1785
AclWI	GGATC	8 cut(s)	166, 179, 1079, 1222, 1378, 1670, 2528, 2541
AcoI	YGGCCR	2 cut(s)	141, 1470
AcsI	RAATTY	4 cut(s)	338, 699, 1056, 1238
AcuI	CTGAAG	4 cut(s)	1209, 1331, 1334, 2264
AcyI	GRCGYC	1 cut(s)	2318
AdeI	CACNNNGTG	1 cut(s)	2192
AfaI	GTAC	6 cut(s)	272, 385, 748, 1026, 2301, 2553
AfiI	CCNNNNNNNGG	8 cut(s)	267, 435, 808, 809, 1468, 1751, 2645, 2774
AflIII	ACRYGT	1 cut(s)	964
AhdI	GACNNNNNGTC	1 cut(s)	2729
AjnI	CCWGG	2 cut(s)	451, 2413
AjuI	GAANNNNNNNTTGG	8 cut(s)	467, 499, 1421, 1453, 2475, 2507, 2761, 2793
Alw21I	GWGCWC	3 cut(s)	150, 2211, 2711
Alw26I	GTCTC	4 cut(s)	171, 972, 2309, 2629
AlwI	GGATC	8 cut(s)	166, 179, 1079, 1222, 1378, 1670, 2528, 2541
AlwNI	CAGNNNCTG	2 cut(s)	1309, 1426
Aor13HI	TCCGGA	1 cut(s)	2172
AoxI	GGCC	5 cut(s)	141, 258, 401, 602, 1470
ApeKI	GCWGC	7 cut(s)	441, 1226, 1303, 1331, 1886, 2546, 2680
ApoI	RAATTY	4 cut(s)	338, 699, 1056, 1238
Asp700I	GAANNNNTTC	1 cut(s)	700
Asp718I	GGTACC	1 cut(s)	270
AspLEI	GCGC	2 cut(s)	819, 1130
AspS9I	GGNCC	7 cut(s)	217, 253, 258, 401, 618, 1154, 2147
AsuC2I	CCSGG	4 cut(s)	169, 215, 257, 275
AsuHPI	GGTGA	7 cut(s)	500, 968, 1417, 1720, 1771, 2618, 2725
AsuII	TTCGAA	2 cut(s)	704, 2262
AvaII	GGWCC	5 cut(s)	217, 253, 618, 1154, 2147
BalI	TGGCCA	1 cut(s)	1472
BamHI	GGATCC	2 cut(s)	171, 2533
BanI	GGYRCC	1 cut(s)	270
BanII	GRGCYC	3 cut(s)	2060, 2211, 2711
BarI	GAAGNNNNNNTAC	2 cut(s)	2559, 2591
BauI	CACGAG	1 cut(s)	2522
Bbv12I	GWGCWC	3 cut(s)	150, 2211, 2711
BbvCI	CCTCAGC	2 cut(s)	121, 1913
BbvI	GCAGC	7 cut(s)	428, 1213, 1315, 1318, 1898, 2533, 2692
BciT130I	CCWGG	2 cut(s)	453, 2415
BciVI	GTATCC	1 cut(s)	2612
BclI	TGATCA	1 cut(s)	1735
BcnI	CCSGG	4 cut(s)	169, 215, 257, 275
BcoDI	GTCTC	4 cut(s)	171, 972, 2309, 2629
BfaI	CTAG	3 cut(s)	570, 606, 2809
BfmI	CTRYAG	6 cut(s)	331, 1001, 1200, 1863, 2200, 2547
BfoI	RGCGCY	1 cut(s)	820
BfuAI	ACCTGC	2 cut(s)	511, 2475
BfuI	GTATCC	1 cut(s)	2612
BisI	GCNGC	9 cut(s)	442, 1227, 1304, 1332, 1585, 1783, 1887, 2547, 2681
BlsI	GCNGC	9 cut(s)	443, 1228, 1305, 1333, 1586, 1784, 1888, 2548, 2682
Bme1390I	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2415
Bme18I	GGWCC	5 cut(s)	217, 253, 618, 1154, 2147
BmeRI	GACNNNNNGTC	1 cut(s)	2729
BmgT120I	GGNCC	7 cut(s)	217, 253, 258, 401, 618, 1154, 2147
BmiI	GGNNCC	8 cut(s)	6, 173, 254, 272, 619, 776, 2059, 2535
BmrFI	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2415
BmrI	ACTGGG	2 cut(s)	417, 1803
BmsI	GCATC	5 cut(s)	813, 2264, 2356, 2440, 2795
BmuI	ACTGGG	2 cut(s)	417, 1803
BpmI	CTGGAG	4 cut(s)	68, 1395, 2562, 2735
Bpu10I	CCTNAGC	2 cut(s)	121, 1913
Bpu14I	TTCGAA	2 cut(s)	704, 2262
BpuEI	CTTGAG	3 cut(s)	1573, 2653, 2725
BpuMI	CCSGG	4 cut(s)	169, 215, 257, 275
BsaBI	GATNNNNATC	1 cut(s)	1661
BsaHI	GRCGYC	1 cut(s)	2318
BsaI	GGTCTC	1 cut(s)	2629
BsaWI	WCCGGW	1 cut(s)	2172
BsaXI	ACNNNNNCTCC	2 cut(s)	2535, 2565
Bsc4I	CCNNNNNNNGG	8 cut(s)	267, 435, 808, 809, 1468, 1751, 2645, 2774
Bse1I	ACTGG	9 cut(s)	85, 412, 901, 1639, 1671, 1798, 2545, 2718, 2729
Bse3DI	GCAATG	6 cut(s)	763, 778, 945, 1857, 2608, 2669
Bse8I	GATNNNNATC	1 cut(s)	1661
BseAI	TCCGGA	1 cut(s)	2172
BseBI	CCWGG	2 cut(s)	453, 2415
BseGI	GGATG	7 cut(s)	295, 605, 1048, 1240, 1692, 1738, 1975
BseJI	GATNNNNATC	1 cut(s)	1661
BseLI	CCNNNNNNNGG	8 cut(s)	267, 435, 808, 809, 1468, 1751, 2645, 2774
BseMI	GCAATG	6 cut(s)	763, 778, 945, 1857, 2608, 2669
BseMII	CTCAG	2 cut(s)	135, 1927
BseNI	ACTGG	9 cut(s)	85, 412, 901, 1639, 1671, 1798, 2545, 2718, 2729
BseRI	GAGGAG	5 cut(s)	563, 1469, 1510, 1513, 2685
BseX3I	CGGCCG	1 cut(s)	141
BseXI	GCAGC	7 cut(s)	428, 1213, 1315, 1318, 1898, 2533, 2692
BseYI	CCCAGC	2 cut(s)	1181, 1682
BsgI	GTGCAG	3 cut(s)	365, 539, 2517
Bsh1285I	CGRYCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	143, 260, 403, 604, 1472
BshNI	GGYRCC	1 cut(s)	270
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	3 cut(s)	150, 2211, 2711
BsiSI	CCGG	6 cut(s)	140, 169, 215, 256, 274, 2173
BslFI	GGGAC	3 cut(s)	523, 785, 1198
BslI	CCNNNNNNNGG	8 cut(s)	267, 435, 808, 809, 1468, 1751, 2645, 2774
BsmAI	GTCTC	4 cut(s)	171, 972, 2309, 2629
BsmBI	CGTCTC	1 cut(s)	2309
BsmFI	GGGAC	3 cut(s)	523, 785, 1198
BsmI	GAATGC	3 cut(s)	246, 326, 2664
BsnI	GGCC	5 cut(s)	143, 260, 403, 604, 1472
Bso31I	GGTCTC	1 cut(s)	2629
Bsp119I	TTCGAA	2 cut(s)	704, 2262
Bsp1286I	GDGCHC	4 cut(s)	150, 2060, 2211, 2711
Bsp13I	TCCGGA	1 cut(s)	2172
Bsp1407I	TGTACA	2 cut(s)	1024, 2299
Bsp19I	CCATGG	2 cut(s)	1230, 1716
BspACI	CCGC	8 cut(s)	73, 79, 206, 210, 1555, 1585, 1782, 1785
BspANI	GGCC	5 cut(s)	143, 260, 403, 604, 1472
BspCNI	CTCAG	2 cut(s)	134, 1926
BspEI	TCCGGA	1 cut(s)	2172
BspHI	TCATGA	1 cut(s)	2077
BspLI	GGNNCC	8 cut(s)	6, 173, 254, 272, 619, 776, 2059, 2535
BspMAI	CTGCAG	2 cut(s)	1204, 2551
BspMI	ACCTGC	2 cut(s)	511, 2475
BspPI	GGATC	8 cut(s)	166, 179, 1079, 1222, 1378, 1670, 2528, 2541
BspT104I	TTCGAA	2 cut(s)	704, 2262
BspT107I	GGYRCC	1 cut(s)	270
BspTNI	GGTCTC	1 cut(s)	2629
BsrBI	CCGCTC	1 cut(s)	1587
BsrDI	GCAATG	6 cut(s)	763, 778, 945, 1857, 2608, 2669
BsrGI	TGTACA	2 cut(s)	1024, 2299
BsrI	ACTGG	9 cut(s)	85, 412, 901, 1639, 1671, 1798, 2545, 2718, 2729
BssNI	GRCGYC	1 cut(s)	2318
BssSI	CACGAG	1 cut(s)	2522
BssT1I	CCWWGG	7 cut(s)	910, 1089, 1230, 1716, 2061, 2331, 2555
Bst2BI	CACGAG	1 cut(s)	2522
Bst2UI	CCWGG	2 cut(s)	453, 2415
Bst4CI	ACNGT	4 cut(s)	529, 808, 1921, 2797
Bst6I	CTCTTC	3 cut(s)	413, 1317, 1938
BstACI	GRCGYC	1 cut(s)	2318
BstAPI	GCANNNNNTGC	2 cut(s)	1895, 2459
BstAUI	TGTACA	2 cut(s)	1024, 2299
BstBI	TTCGAA	2 cut(s)	704, 2262
BstC8I	GCNNGC	7 cut(s)	210, 446, 861, 986, 1078, 2455, 2629
BstDEI	CTNAG	7 cut(s)	121, 128, 627, 1913, 2435, 2586, 2773
BstDSI	CCRYGG	3 cut(s)	1150, 1230, 1716
BstF5I	GGATG	7 cut(s)	295, 605, 1048, 1240, 1692, 1738, 1975
BstH2I	RGCGCY	1 cut(s)	820
BstHHI	GCGC	2 cut(s)	819, 1130
BstMAI	GTCTC	4 cut(s)	171, 972, 2309, 2629
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	6 cut(s)	665, 823, 994, 1340, 1895, 2459
BstNI	CCWGG	2 cut(s)	453, 2415
BstNSI	RCATGY	1 cut(s)	968
BstSCI	CCNGG	6 cut(s)	167, 213, 255, 273, 451, 2413
BstSFI	CTRYAG	6 cut(s)	331, 1001, 1200, 1863, 2200, 2547
BstV1I	GCAGC	7 cut(s)	428, 1213, 1315, 1318, 1898, 2533, 2692
BstX2I	RGATCY	5 cut(s)	171, 1084, 1370, 1662, 2533
BstXI	CCANNNNNNTGG	1 cut(s)	1723
BstYI	RGATCY	5 cut(s)	171, 1084, 1370, 1662, 2533
BstZI	CGGCCG	1 cut(s)	141
BsuI	GTATCC	1 cut(s)	2612
BsuRI	GGCC	5 cut(s)	143, 260, 403, 604, 1472
BtgI	CCRYGG	3 cut(s)	1150, 1230, 1716
BtsCI	GGATG	7 cut(s)	295, 605, 1048, 1240, 1692, 1738, 1975
BtsIMutI	CAGTG	6 cut(s)	813, 1678, 1917, 2361, 2538, 2711
BveI	ACCTGC	2 cut(s)	511, 2475
Cac8I	GCNNGC	7 cut(s)	210, 446, 861, 986, 1078, 2455, 2629
CaiI	CAGNNNCTG	2 cut(s)	1309, 1426
CciI	TCATGA	1 cut(s)	2077
CfoI	GCGC	2 cut(s)	819, 1130
Cfr13I	GGNCC	7 cut(s)	217, 253, 258, 401, 618, 1154, 2147
CseI	GACGC	1 cut(s)	2326
Csp6I	GTAC	6 cut(s)	271, 384, 747, 1025, 2300, 2552
CviQI	GTAC	6 cut(s)	271, 384, 747, 1025, 2300, 2552
DdeI	CTNAG	7 cut(s)	121, 128, 627, 1913, 2435, 2586, 2773
DraIII	CACNNNGTG	1 cut(s)	2192
DriI	GACNNNNNGTC	1 cut(s)	2729
EaeI	YGGCCR	2 cut(s)	141, 1470
EagI	CGGCCG	1 cut(s)	141
Eam1104I	CTCTTC	3 cut(s)	413, 1317, 1938
Eam1105I	GACNNNNNGTC	1 cut(s)	2729
EarI	CTCTTC	3 cut(s)	413, 1317, 1938
Ecl136II	GAGCTC	2 cut(s)	2209, 2709
EclXI	CGGCCG	1 cut(s)	141
Eco130I	CCWWGG	7 cut(s)	910, 1089, 1230, 1716, 2061, 2331, 2555
Eco24I	GRGCYC	3 cut(s)	2060, 2211, 2711
Eco31I	GGTCTC	1 cut(s)	2629
Eco47I	GGWCC	5 cut(s)	217, 253, 618, 1154, 2147
Eco52I	CGGCCG	1 cut(s)	141
Eco53kI	GAGCTC	2 cut(s)	2209, 2709
Eco57I	CTGAAG	4 cut(s)	1209, 1331, 1334, 2264
EcoICRI	GAGCTC	2 cut(s)	2209, 2709
EcoRII	CCWGG	2 cut(s)	451, 2413
EcoT14I	CCWWGG	7 cut(s)	910, 1089, 1230, 1716, 2061, 2331, 2555
EcoT38I	GRGCYC	3 cut(s)	2060, 2211, 2711
ErhI	CCWWGG	7 cut(s)	910, 1089, 1230, 1716, 2061, 2331, 2555
Esp3I	CGTCTC	1 cut(s)	2309
FaqI	GGGAC	3 cut(s)	523, 785, 1198
FauI	CCCGC	3 cut(s)	80, 217, 1778
FbaI	TGATCA	1 cut(s)	1735
Fnu4HI	GCNGC	9 cut(s)	442, 1227, 1304, 1332, 1585, 1783, 1887, 2547, 2681
FokI	GGATG	7 cut(s)	302, 612, 1055, 1247, 1699, 1745, 1982
FriOI	GRGCYC	3 cut(s)	2060, 2211, 2711
Fsp4HI	GCNGC	9 cut(s)	442, 1227, 1304, 1332, 1585, 1783, 1887, 2547, 2681
FspBI	CTAG	3 cut(s)	570, 606, 2809
GlaI	GCGC	2 cut(s)	818, 1129
GluI	GCNGC	9 cut(s)	442, 1227, 1304, 1332, 1585, 1783, 1887, 2547, 2681
GsaI	CCCAGC	2 cut(s)	1185, 1686
GsuI	CTGGAG	4 cut(s)	68, 1395, 2562, 2735
HaeII	RGCGCY	1 cut(s)	820
HaeIII	GGCC	5 cut(s)	143, 260, 403, 604, 1472
HapII	CCGG	6 cut(s)	140, 169, 215, 256, 274, 2173
HgaI	GACGC	1 cut(s)	2326
HhaI	GCGC	2 cut(s)	819, 1130
Hin1I	GRCGYC	1 cut(s)	2318
Hin6I	GCGC	2 cut(s)	817, 1128
HinP1I	GCGC	2 cut(s)	817, 1128
HincII	GTYRAC	1 cut(s)	832
HindII	GTYRAC	1 cut(s)	832
HindIII	AAGCTT	4 cut(s)	986, 2474, 2508, 2588
HpaII	CCGG	6 cut(s)	140, 169, 215, 256, 274, 2173
HphI	GGTGA	7 cut(s)	500, 968, 1417, 1720, 1771, 2618, 2725
Hpy166II	GTNNAC	3 cut(s)	832, 1777, 2302
Hpy188III	TCNNGA	9 cut(s)	91, 287, 681, 794, 1246, 1374, 1739, 2078, 2173
Hpy8I	GTNNAC	3 cut(s)	832, 1777, 2302
Hpy99I	CGWCG	2 cut(s)	158, 317
HpyCH4III	ACNGT	4 cut(s)	529, 808, 1921, 2797
HpyCH4IV	ACGT	2 cut(s)	512, 1954
HpyF10VI	GCNNNNNNNGC	6 cut(s)	665, 823, 994, 1340, 1895, 2459
HpyF3I	CTNAG	7 cut(s)	121, 128, 627, 1913, 2435, 2586, 2773
HpySE526I	ACGT	2 cut(s)	512, 1954
Hsp92I	GRCGYC	1 cut(s)	2318
HspAI	GCGC	2 cut(s)	817, 1128
Kpn2I	TCCGGA	1 cut(s)	2172
KpnI	GGTACC	1 cut(s)	274
Ksp22I	TGATCA	1 cut(s)	1735
LmnI	GCTCC	8 cut(s)	10, 323, 774, 1282, 1376, 2063, 2543, 2688
Lsp1109I	GCAGC	7 cut(s)	428, 1213, 1315, 1318, 1898, 2533, 2692
LweI	GCATC	5 cut(s)	813, 2264, 2356, 2440, 2795
MaeI	CTAG	3 cut(s)	570, 606, 2809
MaeII	ACGT	2 cut(s)	512, 1954
MaeIII	GTNAC	4 cut(s)	422, 523, 1789, 2731
MbiI	CCGCTC	1 cut(s)	1587
MflI	RGATCY	5 cut(s)	171, 1084, 1370, 1662, 2533
MhlI	GDGCHC	4 cut(s)	150, 2060, 2211, 2711
MlsI	TGGCCA	1 cut(s)	1472
MluNI	TGGCCA	1 cut(s)	1472
MlyI	GAGTC	6 cut(s)	311, 430, 1025, 1417, 2405, 2686
MmeI	TCCRAC	4 cut(s)	32, 1419, 1431, 1539
Mox20I	TGGCCA	1 cut(s)	1472
MroI	TCCGGA	1 cut(s)	2172
MroXI	GAANNNNTTC	1 cut(s)	700
MscI	TGGCCA	1 cut(s)	1472
MseI	TTAA	5 cut(s)	741, 1061, 1170, 1850, 2750
Msp20I	TGGCCA	1 cut(s)	1472
MspI	CCGG	6 cut(s)	140, 169, 215, 256, 274, 2173
MspR9I	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2415
Mva1269I	GAATGC	3 cut(s)	246, 326, 2664
MvaI	CCWGG	2 cut(s)	453, 2415
MwoI	GCNNNNNNNGC	6 cut(s)	665, 823, 994, 1340, 1895, 2459
NciI	CCSGG	4 cut(s)	169, 215, 257, 275
NcoI	CCATGG	2 cut(s)	1230, 1716
NlaIV	GGNNCC	8 cut(s)	6, 173, 254, 272, 619, 776, 2059, 2535
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	3 cut(s)	422, 523, 2731
NspI	RCATGY	1 cut(s)	968
NspV	TTCGAA	2 cut(s)	704, 2262
PagI	TCATGA	1 cut(s)	2077
PciI	ACATGT	1 cut(s)	964
PctI	GAATGC	3 cut(s)	246, 326, 2664
PdmI	GAANNNNTTC	1 cut(s)	700
PflMI	CCANNNNNTGG	1 cut(s)	1468
PkrI	GCNGC	9 cut(s)	443, 1228, 1305, 1333, 1586, 1784, 1888, 2548, 2682
PleI	GAGTC	6 cut(s)	310, 429, 1025, 1417, 2404, 2686
PpsI	GAGTC	6 cut(s)	310, 429, 1025, 1417, 2404, 2686
PscI	ACATGT	1 cut(s)	964
PsiI	TTATAA	1 cut(s)	543
Psp124BI	GAGCTC	2 cut(s)	2211, 2711
Psp6I	CCWGG	2 cut(s)	451, 2413
PspFI	CCCAGC	2 cut(s)	1181, 1682
PspGI	CCWGG	2 cut(s)	451, 2413
PspN4I	GGNNCC	8 cut(s)	6, 173, 254, 272, 619, 776, 2059, 2535
PspPI	GGNCC	7 cut(s)	217, 253, 258, 401, 618, 1154, 2147
PsrI	GAACNNNNNNTAC	2 cut(s)	656, 688
PstI	CTGCAG	2 cut(s)	1204, 2551
PstNI	CAGNNNCTG	2 cut(s)	1309, 1426
PsuI	RGATCY	5 cut(s)	171, 1084, 1370, 1662, 2533
RsaI	GTAC	6 cut(s)	272, 385, 748, 1026, 2301, 2553
RsaNI	GTAC	6 cut(s)	271, 384, 747, 1025, 2300, 2552
SacI	GAGCTC	2 cut(s)	2211, 2711
SaqAI	TTAA	5 cut(s)	741, 1061, 1170, 1850, 2750
SatI	GCNGC	9 cut(s)	442, 1227, 1304, 1332, 1585, 1783, 1887, 2547, 2681
Sau96I	GGNCC	7 cut(s)	217, 253, 258, 401, 618, 1154, 2147
SchI	GAGTC	6 cut(s)	311, 430, 1025, 1417, 2405, 2686
ScrFI	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2415
SduI	GDGCHC	4 cut(s)	150, 2060, 2211, 2711
SfaNI	GCATC	5 cut(s)	813, 2264, 2356, 2440, 2795
SfcI	CTRYAG	6 cut(s)	331, 1001, 1200, 1863, 2200, 2547
SfuI	TTCGAA	2 cut(s)	704, 2262
SinI	GGWCC	5 cut(s)	217, 253, 618, 1154, 2147
SmlI	CTYRAG	3 cut(s)	1588, 2632, 2704
SmoI	CTYRAG	3 cut(s)	1588, 2632, 2704
SsiI	CCGC	8 cut(s)	73, 79, 206, 210, 1555, 1585, 1782, 1785
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	3 cut(s)	570, 606, 2809
SstI	GAGCTC	2 cut(s)	2211, 2711
StyD4I	CCNGG	6 cut(s)	167, 213, 255, 273, 451, 2413
StyI	CCWWGG	7 cut(s)	910, 1089, 1230, 1716, 2061, 2331, 2555
TaaI	ACNGT	4 cut(s)	529, 808, 1921, 2797
TaiI	ACGT	2 cut(s)	515, 1957
TaqI	TCGA	5 cut(s)	156, 350, 704, 1217, 2262
TatI	WGTACW	3 cut(s)	383, 1024, 2299
TauI	GCSGC	2 cut(s)	1587, 1785
Tru1I	TTAA	5 cut(s)	741, 1061, 1170, 1850, 2750
Tru9I	TTAA	5 cut(s)	741, 1061, 1170, 1850, 2750
TscAI	CASTG	6 cut(s)	813, 1678, 1924, 2368, 2545, 2718
TseFI	GTSAC	3 cut(s)	422, 523, 2731
TseI	GCWGC	7 cut(s)	441, 1226, 1303, 1331, 1886, 2546, 2680
Tsp45I	GTSAC	3 cut(s)	422, 523, 2731
TspDTI	ATGAA	8 cut(s)	702, 774, 1185, 1251, 1425, 1706, 2289, 2413
TspGWI	ACGGA	1 cut(s)	1139
TspRI	CASTG	6 cut(s)	813, 1678, 1924, 2368, 2545, 2718
Van91I	CCANNNNNTGG	1 cut(s)	1468
VpaK11BI	GGWCC	5 cut(s)	217, 253, 618, 1154, 2147
XapI	RAATTY	4 cut(s)	338, 699, 1056, 1238
XceI	RCATGY	1 cut(s)	968
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1654, 2620
XmnI	GAANNNNTTC	1 cut(s)	700
XspI	CTAG	3 cut(s)	570, 606, 2809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.