Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0011324

Physical Location & Seq

Genomic Coordinates Reverse (-)

8680053 .. 8685601

Gene Structure 5549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG048100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGGCTCCGACCCCTTCTTCCTCCAAATCCAATCACACCCACCACCAAACCCTAACCAAAACCCCACAATCCCGCCACCGCCTCCAGTTCTTGAAACCCCACCCTTCCCCCAACCCCACCTCAACCCTAAGAGAATCTCCGGCCGAGCACCCCGTCGAAGTCCTCGCCCGGATCCGAGACTACCCAGAATCCAAAGACCCACAACCACCCGCCCAGGTCCTCCAAATCAACCCACAAAAACAGAGCATTCGGGTCCGGGCCGATTTCGGGTACCGGGATTTCACCCTAGATGGGGTTTCGGAGTCCGAAAGCGACGATCTTGGAGCCTTCTACAGCAAATTCGTGCAGTCGAGGATTGATAGTGTGAAAATGGGGGAGAAATGTACTATTATGATGTATGGCCCAACTGGGTCTGGGAAGAGTCACACCATGTTTGGGTGCTGTAAGCAACCAGGGATTGTGTATAGGTCGTTGAAGGATATTTTGGGTGATGGAGAAGATTGTGTGGGGACGTTTGTGCAGGTCACGGTTTTGGAGATTTATAATGAGGAGATTTATGATCTGTTGTCTAGTAATGGTGGTGGTGGGTTTGGGTTTGGATGGCCTAGAGGGAATGGCTCCAATTCTAAGGTTAGACTTGAAGTAATGGGAAAGAAGGCAAAGAACGCAACCTACATTTCTGGAAATGAAGCTGGAAAAATTTCGAAAGAGATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAGAGTACCCTTTGCAATGAAAGAAGTTCTCGGAGCCATTGCATGATAATTCTTGATGTCCCAACAGTGGGTGGGCGCTTGATGCTTGTTGACATGGCTGGTTCTGAAAATATTGAGCAAGCTGGACAAATTGGCGTTGAGGCAAAAATGCAGACTGGAAAGATCAACCAAGGAAACATAGCACTAAAAAGAGTGGTTGAATCCATTGCAAATGGTGATTCACATGTGCCCTTCAGAGACAGCAAGCTTACCATGCTTCTACAGGACTCTTTTGAGGATGACAAGACAAAAATTTTAATGGTTCTGTGTGCAAGCCCAGATCCCAAGGAGATACACAAGACAATCTCCACCCTTGAATATGGTGCAAAAGCAAAATGTATAGTCCGTGGTCCTCATACGCCAATTAAGGATAAAGCTGGGACTGAAGATTCATCTGCAGTCATTTTAGGATCGAGGATTGCCGCCATGGATGAATTTATCCTGAAACTACAAAAGGAGAACAAGCTGAAAGAAAAGGAGCGAAGTGAAGCTCATAAGCAGCTACTAAAGAAAGAAGAAGAGGTTGCTGCATTGAGAGCTAAACTTCAGTCAATGGAAGGGAAGGGATCTGGAGCAAAAGAGGAAGAAATCAACTTGAAGGTGAATGAAGTAGCCCAGACTCTGAAACAGGAATTGGAAAAGAAGTTGGAGGAGTGCCAGAGAATGGCCAATGAGTTTGTTGAATTGGAGAGGAGGAGAATGGAAGAAAGGATATTGCAACAGCAACAAGAAGTTGAAATGTTGAGGAAGCGGTTGGAGGAAATTGAGTTTGAGCTATGCCGCTCAAGTGATGGAAATGGCGTGGAGAGTGGGAGAAAGGACAATGATGGAATCCAGTTTGCCAAAAGGTTGATGGGGATCTATTCCAGTGATGGGGCTGGGATGATGAAGTCAATGGATATGGTGAAGTCCATGGATTTGGACATGGATGATCAAGAACCTTTTGCTAGTGTGGTGAAATATGTAGGTGTGAACTGCGGGGTAACTGGGGCTTATCAATCTGACAGCAATAGTGTCCAAGGATTTGTGAATCAGCCTCAATTAAATGCCATTGCTACAGAGAATAATGATTCCTTTGCAGCAAAATATGCTGACAGGGTATGCCTCAGCACTGTTTTTGAGGAAGAAGAAATGGAAGAGGAAGAACGTAAGGAGAATGTGGATGTTGAAGAAGTGGAGAAAGAAGTTATAGAGGAAAAGAGAGTGTGTATGGTTGATAGGTCTAACCTCAAAAGTAATTATAGTCTGGGCTCCTTGGTATCTTTACCTCATGATTATCAGCACACACCAACATTGAATCAGCCAAGCAGAAATGTAGGGGAAGAAGATGGCAAGGGAGGACCAGACGATAGGCTTGTTAGAATCCGGAACATATTTACACTCTGTGGAAACTACAGAGAGCTCTCTCAACACATCACAAGTCCAGCACCTACTCTGAAGCCACTTGCATCATTCGAATCAGAAAATGAAAAGAAACTGACAGAACTAGATGTACACAAAAACAATGAGACGCCATTGGCTTCTAAGGAGAACTACAACCCGTCAAATGATGGCACTGATGCAGATTGTGAAGTGTATGTGAAATGGGAGTCCTCTAAAGAAAATCCAGGGAAGTTCATTACAACTCTTAGGGTTGTAAAAGATGCAAGCCTTGCTGACCTGCGAAAGCTTATTGAAATCTATCTTGGTGCAGATAATCAAGCTTTCAACTTTCTCGTGCTTGGGGTATGTCAGCTTCTAAGTTTAAATGAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0008017 GO:0008092 GO:0008150 GO:0008574 GO:0009524 GO:0009987 GO:0010970 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030705 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0047496 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0072384 GO:0099111 GO:0099518 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

845

Amino Acids

94.37

Weight (kDa)

5.56

Isoelectric Point (pI)

51.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	58 - 189	1.7e-08	Microtubule binding
Kinesin	PF00225	78 - 374	3.2e-61	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14330
fragaria_vesca	FvH4_4g04000 FvH4_4g04000
malus_domestica	MD13G1216300.v1.1 MD16G1221700.v1.1
prunus_persica	Prupe.1G042100_v2.0.a1 Prupe.4G184200_v2.0.a1
pyrus_communis	pycom13g18980 pycom16g18590
rosa_chinensis	RchiOBHm_Chr4g0394251
rosa_laevigata	RLG00000009711
rosa_multiflora	Rmu_sc0007246.1_g000005 Rmu_ssc0000473.1_g000031
rosa_roxburghii	Rroxscaffold_5G00339300
rosa_rugosa	Rorug03G0368300.1
rosa_samantha	Rh4AG051100 Rh4BG048100 Rh4CG054800 Rh4DG047800
rosa_wichuraiana	Rw4G004070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	543
Acc36I	ACCTGC	2 cut(s)	511, 2448
Acc65I	GGTACC	1 cut(s)	270
AccB1I	GGYRCC	1 cut(s)	270
AccB7I	CCANNNNNTGG	1 cut(s)	1444
AccBSI	CCGCTC	1 cut(s)	1563
AccIII	TCCGGA	1 cut(s)	2145
AciI	CCGC	7 cut(s)	73, 79, 210, 1203, 1531, 1561, 1758
AclWI	GGATC	6 cut(s)	166, 179, 1055, 1198, 1354, 1646
AcoI	YGGCCR	2 cut(s)	141, 1446
AcsI	RAATTY	4 cut(s)	338, 699, 1032, 1214
AcuI	CTGAAG	4 cut(s)	958, 1185, 1310, 2237
AcyI	GRCGYC	1 cut(s)	2291
AdeI	CACNNNGTG	1 cut(s)	2165
AfaI	GTAC	4 cut(s)	272, 385, 748, 2274
AfiI	CCNNNNNNNGG	8 cut(s)	267, 291, 292, 435, 808, 809, 1444, 1653
AflIII	ACRYGT	1 cut(s)	964
AjnI	CCWGG	3 cut(s)	213, 451, 2386
AjuI	GAANNNNNNNTTGG	6 cut(s)	467, 499, 1397, 1429, 2448, 2480
Alw21I	GWGCWC	2 cut(s)	150, 2184
Alw26I	GTCTC	3 cut(s)	171, 972, 2282
AlwI	GGATC	6 cut(s)	166, 179, 1055, 1198, 1354, 1646
AlwNI	CAGNNNCTG	1 cut(s)	1402
Aor13HI	TCCGGA	1 cut(s)	2145
AoxI	GGCC	5 cut(s)	141, 258, 400, 602, 1446
ApeKI	GCWGC	3 cut(s)	1279, 1307, 1859
ApoI	RAATTY	4 cut(s)	338, 699, 1032, 1214
Asp700I	GAANNNNTTC	1 cut(s)	700
Asp718I	GGTACC	1 cut(s)	270
AspLEI	GCGC	1 cut(s)	819
AspS9I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
AsuC2I	CCSGG	3 cut(s)	169, 257, 275
AsuHPI	GGTGA	6 cut(s)	274, 500, 968, 1393, 1696, 1747
AsuII	TTCGAA	2 cut(s)	704, 2235
AvaII	GGWCC	4 cut(s)	217, 253, 1130, 2120
BaeGI	GKGCMC	1 cut(s)	972
BalI	TGGCCA	1 cut(s)	1448
BamHI	GGATCC	1 cut(s)	171
BanI	GGYRCC	1 cut(s)	270
BanII	GRGCYC	2 cut(s)	2033, 2184
BarI	GAAGNNNNNNTAC	2 cut(s)	2499, 2531
BauI	CACGAG	1 cut(s)	2495
Bbv12I	GWGCWC	2 cut(s)	150, 2184
BbvCI	CCTCAGC	1 cut(s)	1886
BbvI	GCAGC	3 cut(s)	1291, 1294, 1871
BccI	CCATC	9 cut(s)	284, 485, 594, 1565, 1601, 1627, 1646, 2102, 2324
BciT130I	CCWGG	3 cut(s)	215, 453, 2388
BclI	TGATCA	1 cut(s)	1711
BcnI	CCSGG	3 cut(s)	169, 257, 275
BcoDI	GTCTC	3 cut(s)	171, 972, 2282
BfaI	CTAG	5 cut(s)	287, 570, 606, 1728, 2267
BfmI	CTRYAG	5 cut(s)	331, 1001, 1176, 1836, 2173
BfoI	RGCGCY	1 cut(s)	820
BfuAI	ACCTGC	2 cut(s)	511, 2448
BisI	GCNGC	5 cut(s)	1203, 1280, 1308, 1561, 1860
BlsI	GCNGC	5 cut(s)	1204, 1281, 1309, 1562, 1861
Bme1390I	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2388
Bme18I	GGWCC	4 cut(s)	217, 253, 1130, 2120
BmgT120I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
BmiI	GGNNCC	8 cut(s)	6, 173, 254, 272, 325, 619, 776, 2032
BmrFI	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2388
BmrI	ACTGGG	2 cut(s)	417, 1776
BmsI	GCATC	4 cut(s)	813, 2237, 2329, 2413
BmuI	ACTGGG	2 cut(s)	417, 1776
BpmI	CTGGAG	2 cut(s)	68, 1371
Bpu10I	CCTNAGC	1 cut(s)	1886
Bpu14I	TTCGAA	2 cut(s)	704, 2235
BpuEI	CTTGAG	1 cut(s)	1549
BpuMI	CCSGG	3 cut(s)	169, 257, 275
BsaBI	GATNNNNATC	1 cut(s)	1637
BsaHI	GRCGYC	1 cut(s)	2291
BsaWI	WCCGGW	1 cut(s)	2145
Bsc4I	CCNNNNNNNGG	8 cut(s)	267, 291, 292, 435, 808, 809, 1444, 1653
Bse1I	ACTGG	6 cut(s)	85, 412, 901, 1615, 1647, 1771
Bse3DI	GCAATG	4 cut(s)	763, 778, 945, 1830
Bse8I	GATNNNNATC	1 cut(s)	1637
BseAI	TCCGGA	1 cut(s)	2145
BseBI	CCWGG	3 cut(s)	215, 453, 2388
BseGI	GGATG	6 cut(s)	605, 1024, 1216, 1668, 1714, 1948
BseJI	GATNNNNATC	1 cut(s)	1637
BseLI	CCNNNNNNNGG	8 cut(s)	267, 291, 292, 435, 808, 809, 1444, 1653
BseMI	GCAATG	4 cut(s)	763, 778, 945, 1830
BseMII	CTCAG	1 cut(s)	1900
BseNI	ACTGG	6 cut(s)	85, 412, 901, 1615, 1647, 1771
BseRI	GAGGAG	4 cut(s)	563, 1445, 1486, 1489
BseSI	GKGCMC	1 cut(s)	972
BseX3I	CGGCCG	1 cut(s)	141
BseXI	GCAGC	3 cut(s)	1291, 1294, 1871
BseYI	CCCAGC	2 cut(s)	1157, 1658
BsgI	GTGCAG	3 cut(s)	365, 539, 2490
Bsh1285I	CGRYCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	143, 260, 402, 604, 1448
BshNI	GGYRCC	1 cut(s)	270
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	2 cut(s)	150, 2184
BsiSI	CCGG	5 cut(s)	140, 169, 256, 274, 2146
BslFI	GGGAC	3 cut(s)	523, 785, 1174
BslI	CCNNNNNNNGG	8 cut(s)	267, 291, 292, 435, 808, 809, 1444, 1653
BsmAI	GTCTC	3 cut(s)	171, 972, 2282
BsmBI	CGTCTC	1 cut(s)	2282
BsmFI	GGGAC	3 cut(s)	523, 785, 1174
BsmI	GAATGC	1 cut(s)	246
BsnI	GGCC	5 cut(s)	143, 260, 402, 604, 1448
Bsp119I	TTCGAA	2 cut(s)	704, 2235
Bsp1286I	GDGCHC	4 cut(s)	150, 972, 2033, 2184
Bsp13I	TCCGGA	1 cut(s)	2145
Bsp1407I	TGTACA	1 cut(s)	2272
Bsp143I	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
Bsp19I	CCATGG	2 cut(s)	1206, 1692
BspACI	CCGC	7 cut(s)	73, 79, 210, 1203, 1531, 1561, 1758
BspANI	GGCC	5 cut(s)	143, 260, 402, 604, 1448
BspCNI	CTCAG	1 cut(s)	1899
BspEI	TCCGGA	1 cut(s)	2145
BspHI	TCATGA	1 cut(s)	2050
BspLI	GGNNCC	8 cut(s)	6, 173, 254, 272, 325, 619, 776, 2032
BspMAI	CTGCAG	1 cut(s)	1180
BspMI	ACCTGC	2 cut(s)	511, 2448
BspPI	GGATC	6 cut(s)	166, 179, 1055, 1198, 1354, 1646
BspT104I	TTCGAA	2 cut(s)	704, 2235
BspT107I	GGYRCC	1 cut(s)	270
BsrBI	CCGCTC	1 cut(s)	1563
BsrDI	GCAATG	4 cut(s)	763, 778, 945, 1830
BsrGI	TGTACA	1 cut(s)	2272
BsrI	ACTGG	6 cut(s)	85, 412, 901, 1615, 1647, 1771
BssMI	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
BssNI	GRCGYC	1 cut(s)	2291
BssSI	CACGAG	1 cut(s)	2495
BssT1I	CCWWGG	6 cut(s)	910, 1065, 1206, 1692, 1798, 2034
Bst2BI	CACGAG	1 cut(s)	2495
Bst2UI	CCWGG	3 cut(s)	215, 453, 2388
Bst4CI	ACNGT	3 cut(s)	529, 808, 1894
Bst6I	CTCTTC	3 cut(s)	413, 1293, 1911
BstACI	GRCGYC	1 cut(s)	2291
BstAPI	GCANNNNNTGC	2 cut(s)	1868, 2432
BstAUI	TGTACA	1 cut(s)	2272
BstBI	TTCGAA	2 cut(s)	704, 2235
BstC8I	GCNNGC	4 cut(s)	861, 986, 1054, 2428
BstDEI	CTNAG	6 cut(s)	128, 627, 1886, 2304, 2408, 2519
BstDSI	CCRYGG	3 cut(s)	1126, 1206, 1692
BstF5I	GGATG	6 cut(s)	605, 1024, 1216, 1668, 1714, 1948
BstH2I	RGCGCY	1 cut(s)	820
BstHHI	GCGC	1 cut(s)	819
BstKTI	GATC	9 cut(s)	174, 319, 562, 906, 1063, 1193, 1349, 1641, 1714
BstMAI	GTCTC	3 cut(s)	171, 972, 2282
BstMBI	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	6 cut(s)	665, 823, 994, 1316, 1868, 2432
BstNI	CCWGG	3 cut(s)	215, 453, 2388
BstNSI	RCATGY	1 cut(s)	968
BstSCI	CCNGG	6 cut(s)	167, 213, 255, 273, 451, 2386
BstSFI	CTRYAG	5 cut(s)	331, 1001, 1176, 1836, 2173
BstSLI	GKGCMC	1 cut(s)	972
BstV1I	GCAGC	3 cut(s)	1291, 1294, 1871
BstX2I	RGATCY	4 cut(s)	171, 1060, 1346, 1638
BstXI	CCANNNNNNTGG	1 cut(s)	1699
BstYI	RGATCY	4 cut(s)	171, 1060, 1346, 1638
BstZI	CGGCCG	1 cut(s)	141
BsuRI	GGCC	5 cut(s)	143, 260, 402, 604, 1448
BtgI	CCRYGG	3 cut(s)	1126, 1206, 1692
BtsCI	GGATG	6 cut(s)	605, 1024, 1216, 1668, 1714, 1948
BtsIMutI	CAGTG	4 cut(s)	813, 1654, 1890, 2334
BveI	ACCTGC	2 cut(s)	511, 2448
Cac8I	GCNNGC	4 cut(s)	861, 986, 1054, 2428
CaiI	CAGNNNCTG	1 cut(s)	1402
CciI	TCATGA	1 cut(s)	2050
CfoI	GCGC	1 cut(s)	819
Cfr13I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
CseI	GACGC	1 cut(s)	2299
Csp6I	GTAC	4 cut(s)	271, 384, 747, 2273
CviAII	CATG	9 cut(s)	430, 784, 835, 965, 994, 1207, 1693, 1705, 2051
CviQI	GTAC	4 cut(s)	271, 384, 747, 2273
DdeI	CTNAG	6 cut(s)	128, 627, 1886, 2304, 2408, 2519
DpnI	GATC	9 cut(s)	173, 318, 561, 905, 1062, 1192, 1348, 1640, 1713
DpnII	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
DraI	TTTAAA	1 cut(s)	2526
DraIII	CACNNNGTG	1 cut(s)	2165
EaeI	YGGCCR	2 cut(s)	141, 1446
EagI	CGGCCG	1 cut(s)	141
Eam1104I	CTCTTC	3 cut(s)	413, 1293, 1911
EarI	CTCTTC	3 cut(s)	413, 1293, 1911
Ecl136II	GAGCTC	1 cut(s)	2182
EclXI	CGGCCG	1 cut(s)	141
Eco130I	CCWWGG	6 cut(s)	910, 1065, 1206, 1692, 1798, 2034
Eco24I	GRGCYC	2 cut(s)	2033, 2184
Eco47I	GGWCC	4 cut(s)	217, 253, 1130, 2120
Eco52I	CGGCCG	1 cut(s)	141
Eco53kI	GAGCTC	1 cut(s)	2182
Eco57I	CTGAAG	4 cut(s)	958, 1185, 1310, 2237
EcoICRI	GAGCTC	1 cut(s)	2182
EcoO109I	RGGNCCY	1 cut(s)	217
EcoRII	CCWGG	3 cut(s)	213, 451, 2386
EcoT14I	CCWWGG	6 cut(s)	910, 1065, 1206, 1692, 1798, 2034
EcoT38I	GRGCYC	2 cut(s)	2033, 2184
ErhI	CCWWGG	6 cut(s)	910, 1065, 1206, 1692, 1798, 2034
Esp3I	CGTCTC	1 cut(s)	2282
FaeI	CATG	9 cut(s)	433, 787, 838, 968, 997, 1210, 1696, 1708, 2054
FaqI	GGGAC	3 cut(s)	523, 785, 1174
FatI	CATG	9 cut(s)	429, 783, 834, 964, 993, 1206, 1692, 1704, 2050
FauI	CCCGC	3 cut(s)	80, 217, 1751
FbaI	TGATCA	1 cut(s)	1711
Fnu4HI	GCNGC	5 cut(s)	1203, 1280, 1308, 1561, 1860
FokI	GGATG	6 cut(s)	612, 1031, 1223, 1675, 1721, 1955
FriOI	GRGCYC	2 cut(s)	2033, 2184
Fsp4HI	GCNGC	5 cut(s)	1203, 1280, 1308, 1561, 1860
FspBI	CTAG	5 cut(s)	287, 570, 606, 1728, 2267
GlaI	GCGC	1 cut(s)	818
GluI	GCNGC	5 cut(s)	1203, 1280, 1308, 1561, 1860
GsaI	CCCAGC	2 cut(s)	1161, 1662
GsuI	CTGGAG	2 cut(s)	68, 1371
HaeII	RGCGCY	1 cut(s)	820
HaeIII	GGCC	5 cut(s)	143, 260, 402, 604, 1448
HapII	CCGG	5 cut(s)	140, 169, 256, 274, 2146
HgaI	GACGC	1 cut(s)	2299
HhaI	GCGC	1 cut(s)	819
Hin1I	GRCGYC	1 cut(s)	2291
Hin1II	CATG	9 cut(s)	433, 787, 838, 968, 997, 1210, 1696, 1708, 2054
Hin6I	GCGC	1 cut(s)	817
HinP1I	GCGC	1 cut(s)	817
HincII	GTYRAC	1 cut(s)	832
HindII	GTYRAC	1 cut(s)	832
HindIII	AAGCTT	3 cut(s)	986, 2447, 2481
HpaII	CCGG	5 cut(s)	140, 169, 256, 274, 2146
HphI	GGTGA	6 cut(s)	274, 500, 968, 1393, 1696, 1747
Hpy166II	GTNNAC	3 cut(s)	832, 1753, 2275
Hpy188III	TCNNGA	8 cut(s)	91, 681, 794, 1222, 1350, 1715, 2051, 2146
Hpy8I	GTNNAC	3 cut(s)	832, 1753, 2275
Hpy99I	CGWCG	2 cut(s)	158, 317
HpyCH4III	ACNGT	3 cut(s)	529, 808, 1894
HpyCH4IV	ACGT	2 cut(s)	512, 1927
HpyF10VI	GCNNNNNNNGC	6 cut(s)	665, 823, 994, 1316, 1868, 2432
HpyF3I	CTNAG	6 cut(s)	128, 627, 1886, 2304, 2408, 2519
HpySE526I	ACGT	2 cut(s)	512, 1927
Hsp92I	GRCGYC	1 cut(s)	2291
Hsp92II	CATG	9 cut(s)	433, 787, 838, 968, 997, 1210, 1696, 1708, 2054
HspAI	GCGC	1 cut(s)	817
Kpn2I	TCCGGA	1 cut(s)	2145
KpnI	GGTACC	1 cut(s)	274
Ksp22I	TGATCA	1 cut(s)	1711
Kzo9I	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
LmnI	GCTCC	7 cut(s)	10, 323, 623, 774, 1258, 1352, 2036
Lsp1109I	GCAGC	3 cut(s)	1291, 1294, 1871
LweI	GCATC	4 cut(s)	813, 2237, 2329, 2413
MaeI	CTAG	5 cut(s)	287, 570, 606, 1728, 2267
MaeII	ACGT	2 cut(s)	512, 1927
MaeIII	GTNAC	3 cut(s)	422, 523, 1762
MalI	GATC	9 cut(s)	173, 318, 561, 905, 1062, 1192, 1348, 1640, 1713
MbiI	CCGCTC	1 cut(s)	1563
MboI	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
MflI	RGATCY	4 cut(s)	171, 1060, 1346, 1638
MhlI	GDGCHC	4 cut(s)	150, 972, 2033, 2184
MlsI	TGGCCA	1 cut(s)	1448
MluNI	TGGCCA	1 cut(s)	1448
MlyI	GAGTC	5 cut(s)	311, 430, 1001, 1393, 2378
MmeI	TCCRAC	3 cut(s)	32, 1407, 1515
Mox20I	TGGCCA	1 cut(s)	1448
MroI	TCCGGA	1 cut(s)	2145
MroXI	GAANNNNTTC	1 cut(s)	700
MscI	TGGCCA	1 cut(s)	1448
MseI	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2525
Msp20I	TGGCCA	1 cut(s)	1448
MspI	CCGG	5 cut(s)	140, 169, 256, 274, 2146
MspR9I	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2388
Mva1269I	GAATGC	1 cut(s)	246
MvaI	CCWGG	3 cut(s)	215, 453, 2388
MwoI	GCNNNNNNNGC	6 cut(s)	665, 823, 994, 1316, 1868, 2432
NciI	CCSGG	3 cut(s)	169, 257, 275
NcoI	CCATGG	2 cut(s)	1206, 1692
NdeII	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
NlaIII	CATG	9 cut(s)	433, 787, 838, 968, 997, 1210, 1696, 1708, 2054
NlaIV	GGNNCC	8 cut(s)	6, 173, 254, 272, 325, 619, 776, 2032
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	2 cut(s)	422, 523
NspI	RCATGY	1 cut(s)	968
NspV	TTCGAA	2 cut(s)	704, 2235
PagI	TCATGA	1 cut(s)	2050
PciI	ACATGT	1 cut(s)	964
PctI	GAATGC	1 cut(s)	246
PdmI	GAANNNNTTC	1 cut(s)	700
PflMI	CCANNNNNTGG	1 cut(s)	1444
PkrI	GCNGC	5 cut(s)	1204, 1281, 1309, 1562, 1861
PleI	GAGTC	5 cut(s)	310, 429, 1001, 1393, 2377
PpsI	GAGTC	5 cut(s)	310, 429, 1001, 1393, 2377
PpuMI	RGGWCCY	1 cut(s)	217
PscI	ACATGT	1 cut(s)	964
PsiI	TTATAA	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	2184
Psp5II	RGGWCCY	1 cut(s)	217
Psp6I	CCWGG	3 cut(s)	213, 451, 2386
PspFI	CCCAGC	2 cut(s)	1157, 1658
PspGI	CCWGG	3 cut(s)	213, 451, 2386
PspN4I	GGNNCC	8 cut(s)	6, 173, 254, 272, 325, 619, 776, 2032
PspPI	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
PspPPI	RGGWCCY	1 cut(s)	217
PsrI	GAACNNNNNNTAC	4 cut(s)	656, 688, 2256, 2288
PstI	CTGCAG	1 cut(s)	1180
PstNI	CAGNNNCTG	1 cut(s)	1402
PsuI	RGATCY	4 cut(s)	171, 1060, 1346, 1638
RsaI	GTAC	4 cut(s)	272, 385, 748, 2274
RsaNI	GTAC	4 cut(s)	271, 384, 747, 2273
SacI	GAGCTC	1 cut(s)	2184
SaqAI	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2525
SatI	GCNGC	5 cut(s)	1203, 1280, 1308, 1561, 1860
Sau3AI	GATC	9 cut(s)	171, 316, 559, 903, 1060, 1190, 1346, 1638, 1711
Sau96I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
SchI	GAGTC	5 cut(s)	311, 430, 1001, 1393, 2378
ScrFI	CCNGG	6 cut(s)	169, 215, 257, 275, 453, 2388
SduI	GDGCHC	4 cut(s)	150, 972, 2033, 2184
SfaNI	GCATC	4 cut(s)	813, 2237, 2329, 2413
SfcI	CTRYAG	5 cut(s)	331, 1001, 1176, 1836, 2173
SfuI	TTCGAA	2 cut(s)	704, 2235
SinI	GGWCC	4 cut(s)	217, 253, 1130, 2120
SmlI	CTYRAG	1 cut(s)	1564
SmoI	CTYRAG	1 cut(s)	1564
SsiI	CCGC	7 cut(s)	73, 79, 210, 1203, 1531, 1561, 1758
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	5 cut(s)	287, 570, 606, 1728, 2267
SstI	GAGCTC	1 cut(s)	2184
StyD4I	CCNGG	6 cut(s)	167, 213, 255, 273, 451, 2386
StyI	CCWWGG	6 cut(s)	910, 1065, 1206, 1692, 1798, 2034
TaaI	ACNGT	3 cut(s)	529, 808, 1894
TaiI	ACGT	2 cut(s)	515, 1930
TaqI	TCGA	5 cut(s)	156, 350, 704, 1193, 2235
TatI	WGTACW	2 cut(s)	383, 2272
TauI	GCSGC	2 cut(s)	1205, 1563
Tru1I	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2525
Tru9I	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2525
TscAI	CASTG	4 cut(s)	813, 1654, 1897, 2341
TseFI	GTSAC	2 cut(s)	422, 523
TseI	GCWGC	3 cut(s)	1279, 1307, 1859
Tsp45I	GTSAC	2 cut(s)	422, 523
TspDTI	ATGAA	8 cut(s)	702, 774, 1161, 1227, 1401, 1682, 2262, 2386
TspGWI	ACGGA	1 cut(s)	1115
TspRI	CASTG	4 cut(s)	813, 1654, 1897, 2341
Van91I	CCANNNNNTGG	1 cut(s)	1444
VpaK11BI	GGWCC	4 cut(s)	217, 253, 1130, 2120
XapI	RAATTY	4 cut(s)	338, 699, 1032, 1214
XceI	RCATGY	1 cut(s)	968
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1630
XmnI	GAANNNNTTC	1 cut(s)	700
XspI	CTAG	5 cut(s)	287, 570, 606, 1728, 2267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.