Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0011324

Physical Location & Seq

Genomic Coordinates Reverse (-)

10836151 .. 10841634

Gene Structure 5484 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG054800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGCTTGTTGACATGGCTGGTTCTGAAAATATTGAGCAAGCTGGACAAATTGGCTTTGAGGCAAAAATGCAGACTGGAAAGATCAACCAAGGAAACATAGCACTAAAAAGAGTGGTTGAATCCATTGCAAATGGTGATTCACATGTGCCCTTCAGAGACAGCAAGCTTACCATGCTTCTACAGGACTCTTTTGAGGATGACAAGACAAAAATTTTAATGGTTCTGTGTGCAAGCCCAGATGCCAAGGAGATACACAAGACAATCTCCACCCTTGAATATGGCGCAAAAGCAAAATGTATAGTCCGTGGTCCTCATACGCCAATTAAGGATAAAGCTGGGACTGAAGATTCATCTGCAGTCATTTTAGGATCTAGGATTGCTGCCATGGATGAATTTATCCTGAAACTACAAAAGGAGAACAAGCTGAAAGAAAAGGAGCGAAGTGAAGCTCATAAGCAGCTACTGAAGAAAGAAGAAGAGGTTGCTGCATTGAGAGCTAAACTTCAGTCAATGGAAGGGAAGGGATCTGGAGCAAAAGAGGAAGAAATCAACTTGAAGGTGAATGAAGTAGCCCAGACTCTGAAACAGGAATTGGAAAAGAAGTTGGAGGAGTGCCAGAGAATGGCCAATGAGTTTGTTGAATTGGAGAGGAGGAGAATGGAAGAAAGGATATTGCAACAGCAACAAGAAGTTGAAATGTTGAGGAAGCGGTTGGAGGAAATTGAGTTTGAGCTATGCCGCTCAAGTGATGGAAATGGTGTGGAGAGTGGGAGAAAGGACAATGATGGAATCCAGTTTGCCAAAAGGTTGATGGGGATCTATTCCAGTGATGGTGCCGGGATGATGAAGTCAATGGACATGGTGAAGTCCATGGATTTGGACGTGGATGATCAAGAACCTTTTGCTGGTGTGGTGAAATATGTAGGTGTGAACTGCGGGGTAACTGGGGCTTATCAATCTGACAGCAATAGTGTCCAAGGATTTGTGAATCAGCCTCAATTAAATGCCATTGCTACAGAGAATAATGATTCCTTTGCAGCAAAATATGCTGACAGGGTATGCCTCAGCACTGTTTTTGAGGAAGAAGAAATGGAAGAGGAAGAACGTAAGGAGAATGTGGATGTTGAAGAAGTGGAGAAAGAAGTTATAGAGGAAAAGAGAGTGTGTATGGTTGATAGGTCTAACCTCAAAAGTAATTATAGTCTGGGCTCCTTGGTATCTTTACCTCATGATTATCAGCACACACCAACTTTGAATCAGCCAAGCAGAAATGTAGGGGAAGAAGATGGCAAGGGAGGACCAGACGATAGGCTTGTTAGAATCCGGAACATATTTACACTCTGTGGAAACTACAGAGAGCTCTCTCAACACATCACAAGTCCAGCACCTGCTCTGAAGCCACTTGCATCATTCGAATCAGAAAATGAAAAGAAACTGACAGAACTAGATGTACACAAAAACAATGAGACGCCATTGGCTTCCAAGGAGAACTACAACCCGTCAAATGATGGCACTGATGCAGATTGTGAAGTGTATGTGAAATGGGAGTCCTCTAAAGAAAATCCAGGGAAGTTCATTACAACTCTTAGGGTTGTAAAAGATGCAAGCCTTGCTGACCTGCGAAAGCTTATTGAAATCTATCTTGGTGCAGATAATCAAGCTTTCAACTTTCTCGTGCTTGGGGATCCCACTGGAGCTGCAGTACCAAGGGAGAAGGAAGCAACAATACAGACGACTAAGCTTCCCCTTTGCAATGGTGAAACCAATGGATACTTGGCTTGCTTGAGACCATTGAAGGGAACACAGGGAATGCAATGTAGCCCAATTCAGCAGCTCCCATTGACTCCTCTCCCCTTGAGCTCACTGGAGAACAGACTACCAGTCACCCCAACAACTTTCTTAACACCAAAAGTAGCACCAAACTTAGGTTCTACTCCTTTTATTACAGTCAGAAGATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0008017 GO:0008092 GO:0008150 GO:0008574 GO:0009524 GO:0009987 GO:0010970 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030705 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0047496 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0072384 GO:0099111 GO:0099518 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

653

Amino Acids

72.73

Weight (kDa)

5.13

Isoelectric Point (pI)

49.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	2 - 100	4.3e-25	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14330
fragaria_vesca	FvH4_4g04000 FvH4_4g04000
malus_domestica	MD13G1216300.v1.1 MD16G1221700.v1.1
prunus_persica	Prupe.1G042100_v2.0.a1 Prupe.4G184200_v2.0.a1
pyrus_communis	pycom13g18980 pycom16g18590
rosa_chinensis	RchiOBHm_Chr4g0394251
rosa_laevigata	RLG00000009711
rosa_multiflora	Rmu_sc0007246.1_g000005 Rmu_ssc0000473.1_g000031
rosa_roxburghii	Rroxscaffold_5G00339300
rosa_rugosa	Rorug03G0368300.1
rosa_samantha	Rh4AG051100 Rh4BG048100 Rh4CG054800 Rh4DG047800
rosa_wichuraiana	Rw4G004070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1396
Acc36I	ACCTGC	2 cut(s)	1396, 1626
AccB1I	GGYRCC	1 cut(s)	833
AccB7I	CCANNNNNTGG	1 cut(s)	622
AccBSI	CCGCTC	1 cut(s)	741
AccIII	TCCGGA	1 cut(s)	1323
AciI	CCGC	3 cut(s)	709, 739, 936
AclWI	GGATC	5 cut(s)	376, 532, 824, 1679, 1692
AcoI	YGGCCR	1 cut(s)	624
AcsI	RAATTY	2 cut(s)	210, 392
AcuI	CTGAAG	5 cut(s)	136, 363, 485, 488, 1415
AcyI	GRCGYC	1 cut(s)	1469
AdeI	CACNNNGTG	1 cut(s)	1343
AfaI	GTAC	2 cut(s)	1452, 1704
AfiI	CCNNNNNNNGG	4 cut(s)	622, 905, 1796, 1925
AflIII	ACRYGT	1 cut(s)	142
AhdI	GACNNNNNGTC	1 cut(s)	1880
AjiI	CACGTC	1 cut(s)	883
AjnI	CCWGG	1 cut(s)	1564
AjuI	GAANNNNNNNTTGG	6 cut(s)	575, 607, 1626, 1658, 1912, 1944
Alw21I	GWGCWC	2 cut(s)	1362, 1862
Alw26I	GTCTC	3 cut(s)	150, 1460, 1780
AlwI	GGATC	5 cut(s)	376, 532, 824, 1679, 1692
AlwNI	CAGNNNCTG	3 cut(s)	463, 580, 1388
Aor13HI	TCCGGA	1 cut(s)	1323
AoxI	GGCC	1 cut(s)	624
ApeKI	GCWGC	6 cut(s)	380, 457, 485, 1037, 1697, 1831
ApoI	RAATTY	2 cut(s)	210, 392
AspLEI	GCGC	1 cut(s)	284
AspS9I	GGNCC	2 cut(s)	308, 1298
AsuC2I	CCSGG	1 cut(s)	838
AsuHPI	GGTGA	6 cut(s)	146, 571, 874, 925, 1769, 1876
AsuII	TTCGAA	1 cut(s)	1413
AvaII	GGWCC	2 cut(s)	308, 1298
BaeGI	GKGCMC	1 cut(s)	150
BalI	TGGCCA	1 cut(s)	626
BamHI	GGATCC	1 cut(s)	1684
BanI	GGYRCC	1 cut(s)	833
BanII	GRGCYC	3 cut(s)	1211, 1362, 1862
BarI	GAAGNNNNNNTAC	2 cut(s)	1710, 1742
BauI	CACGAG	1 cut(s)	1673
Bbv12I	GWGCWC	2 cut(s)	1362, 1862
BbvCI	CCTCAGC	1 cut(s)	1064
BbvI	GCAGC	6 cut(s)	367, 469, 472, 1049, 1684, 1843
BccI	CCATC	6 cut(s)	743, 779, 805, 824, 1280, 1502
BciT130I	CCWGG	1 cut(s)	1566
BciVI	GTATCC	1 cut(s)	1763
BclI	TGATCA	1 cut(s)	889
BcnI	CCSGG	1 cut(s)	838
BcoDI	GTCTC	3 cut(s)	150, 1460, 1780
BfaI	CTAG	3 cut(s)	372, 1445, 1960
BfmI	CTRYAG	5 cut(s)	179, 354, 1014, 1351, 1698
BfuAI	ACCTGC	2 cut(s)	1396, 1626
BfuI	GTATCC	1 cut(s)	1763
BisI	GCNGC	7 cut(s)	381, 458, 486, 739, 1038, 1698, 1832
BlsI	GCNGC	7 cut(s)	382, 459, 487, 740, 1039, 1699, 1833
Bme1390I	CCNGG	2 cut(s)	838, 1566
Bme18I	GGWCC	2 cut(s)	308, 1298
BmeRI	GACNNNNNGTC	1 cut(s)	1880
BmgBI	CACGTC	1 cut(s)	883
BmgT120I	GGNCC	2 cut(s)	308, 1298
BmiI	GGNNCC	3 cut(s)	835, 1210, 1686
BmrFI	CCNGG	2 cut(s)	838, 1566
BmrI	ACTGGG	1 cut(s)	954
BmsI	GCATC	5 cut(s)	229, 1415, 1507, 1591, 1946
BmuI	ACTGGG	1 cut(s)	954
BpmI	CTGGAG	3 cut(s)	549, 1713, 1886
Bpu10I	CCTNAGC	1 cut(s)	1064
Bpu14I	TTCGAA	1 cut(s)	1413
BpuEI	CTTGAG	3 cut(s)	727, 1804, 1876
BpuMI	CCSGG	1 cut(s)	838
BsaBI	GATNNNNATC	1 cut(s)	815
BsaHI	GRCGYC	1 cut(s)	1469
BsaI	GGTCTC	1 cut(s)	1780
BsaWI	WCCGGW	1 cut(s)	1323
BsaXI	ACNNNNNCTCC	2 cut(s)	1686, 1716
Bsc4I	CCNNNNNNNGG	4 cut(s)	622, 905, 1796, 1925
Bse1I	ACTGG	7 cut(s)	79, 793, 825, 949, 1696, 1869, 1880
Bse3DI	GCAATG	4 cut(s)	123, 1008, 1759, 1820
Bse8I	GATNNNNATC	1 cut(s)	815
BseAI	TCCGGA	1 cut(s)	1323
BseBI	CCWGG	1 cut(s)	1566
BseGI	GGATG	5 cut(s)	202, 394, 846, 892, 1126
BseJI	GATNNNNATC	1 cut(s)	815
BseLI	CCNNNNNNNGG	4 cut(s)	622, 905, 1796, 1925
BseMI	GCAATG	4 cut(s)	123, 1008, 1759, 1820
BseMII	CTCAG	1 cut(s)	1078
BseNI	ACTGG	7 cut(s)	79, 793, 825, 949, 1696, 1869, 1880
BseRI	GAGGAG	4 cut(s)	623, 664, 667, 1836
BseSI	GKGCMC	1 cut(s)	150
BseXI	GCAGC	6 cut(s)	367, 469, 472, 1049, 1684, 1843
BseYI	CCCAGC	1 cut(s)	335
BsgI	GTGCAG	1 cut(s)	1668
BshFI	GGCC	1 cut(s)	626
BshNI	GGYRCC	1 cut(s)	833
BsiHKAI	GWGCWC	2 cut(s)	1362, 1862
BsiSI	CCGG	2 cut(s)	837, 1324
BslFI	GGGAC	1 cut(s)	352
BslI	CCNNNNNNNGG	4 cut(s)	622, 905, 1796, 1925
BsmAI	GTCTC	3 cut(s)	150, 1460, 1780
BsmBI	CGTCTC	1 cut(s)	1460
BsmFI	GGGAC	1 cut(s)	352
BsmI	GAATGC	1 cut(s)	1815
BsnI	GGCC	1 cut(s)	626
Bso31I	GGTCTC	1 cut(s)	1780
Bsp119I	TTCGAA	1 cut(s)	1413
Bsp1286I	GDGCHC	4 cut(s)	150, 1211, 1362, 1862
Bsp13I	TCCGGA	1 cut(s)	1323
Bsp1407I	TGTACA	1 cut(s)	1450
Bsp143I	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
Bsp19I	CCATGG	2 cut(s)	384, 870
BspACI	CCGC	3 cut(s)	709, 739, 936
BspANI	GGCC	1 cut(s)	626
BspCNI	CTCAG	1 cut(s)	1077
BspEI	TCCGGA	1 cut(s)	1323
BspHI	TCATGA	1 cut(s)	1228
BspLI	GGNNCC	3 cut(s)	835, 1210, 1686
BspMAI	CTGCAG	2 cut(s)	358, 1702
BspMI	ACCTGC	2 cut(s)	1396, 1626
BspPI	GGATC	5 cut(s)	376, 532, 824, 1679, 1692
BspT104I	TTCGAA	1 cut(s)	1413
BspT107I	GGYRCC	1 cut(s)	833
BspTNI	GGTCTC	1 cut(s)	1780
BsrBI	CCGCTC	1 cut(s)	741
BsrDI	GCAATG	4 cut(s)	123, 1008, 1759, 1820
BsrGI	TGTACA	1 cut(s)	1450
BsrI	ACTGG	7 cut(s)	79, 793, 825, 949, 1696, 1869, 1880
BssMI	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
BssNI	GRCGYC	1 cut(s)	1469
BssSI	CACGAG	1 cut(s)	1673
BssT1I	CCWWGG	8 cut(s)	88, 243, 384, 870, 976, 1212, 1482, 1706
Bst2BI	CACGAG	1 cut(s)	1673
Bst2UI	CCWGG	1 cut(s)	1566
Bst4CI	ACNGT	2 cut(s)	1072, 1948
Bst6I	CTCTTC	2 cut(s)	471, 1089
BstACI	GRCGYC	1 cut(s)	1469
BstAPI	GCANNNNNTGC	2 cut(s)	1046, 1610
BstAUI	TGTACA	1 cut(s)	1450
BstBI	TTCGAA	1 cut(s)	1413
BstC8I	GCNNGC	5 cut(s)	39, 164, 232, 1606, 1780
BstDEI	CTNAG	4 cut(s)	1064, 1586, 1737, 1924
BstDSI	CCRYGG	3 cut(s)	304, 384, 870
BstF5I	GGATG	5 cut(s)	202, 394, 846, 892, 1126
BstHHI	GCGC	1 cut(s)	284
BstKTI	GATC	6 cut(s)	84, 371, 527, 819, 892, 1687
BstMAI	GTCTC	3 cut(s)	150, 1460, 1780
BstMBI	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
BstMWI	GCNNNNNNNGC	4 cut(s)	172, 494, 1046, 1610
BstNI	CCWGG	1 cut(s)	1566
BstNSI	RCATGY	1 cut(s)	146
BstSCI	CCNGG	2 cut(s)	836, 1564
BstSFI	CTRYAG	5 cut(s)	179, 354, 1014, 1351, 1698
BstSLI	GKGCMC	1 cut(s)	150
BstV1I	GCAGC	6 cut(s)	367, 469, 472, 1049, 1684, 1843
BstX2I	RGATCY	4 cut(s)	368, 524, 816, 1684
BstXI	CCANNNNNNTGG	1 cut(s)	877
BstYI	RGATCY	4 cut(s)	368, 524, 816, 1684
BsuI	GTATCC	1 cut(s)	1763
BsuRI	GGCC	1 cut(s)	626
BtgI	CCRYGG	3 cut(s)	304, 384, 870
BtrI	CACGTC	1 cut(s)	883
BtsCI	GGATG	5 cut(s)	202, 394, 846, 892, 1126
BtsIMutI	CAGTG	5 cut(s)	832, 1068, 1512, 1689, 1862
BveI	ACCTGC	2 cut(s)	1396, 1626
Cac8I	GCNNGC	5 cut(s)	39, 164, 232, 1606, 1780
CaiI	CAGNNNCTG	3 cut(s)	463, 580, 1388
CciI	TCATGA	1 cut(s)	1228
CfoI	GCGC	1 cut(s)	284
Cfr13I	GGNCC	2 cut(s)	308, 1298
CseI	GACGC	1 cut(s)	1477
Csp6I	GTAC	2 cut(s)	1451, 1703
CviAII	CATG	7 cut(s)	13, 143, 172, 385, 859, 871, 1229
CviQI	GTAC	2 cut(s)	1451, 1703
DdeI	CTNAG	4 cut(s)	1064, 1586, 1737, 1924
DpnI	GATC	6 cut(s)	83, 370, 526, 818, 891, 1686
DpnII	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
DraIII	CACNNNGTG	1 cut(s)	1343
DriI	GACNNNNNGTC	1 cut(s)	1880
EaeI	YGGCCR	1 cut(s)	624
Eam1104I	CTCTTC	2 cut(s)	471, 1089
Eam1105I	GACNNNNNGTC	1 cut(s)	1880
EarI	CTCTTC	2 cut(s)	471, 1089
Ecl136II	GAGCTC	2 cut(s)	1360, 1860
Eco130I	CCWWGG	8 cut(s)	88, 243, 384, 870, 976, 1212, 1482, 1706
Eco24I	GRGCYC	3 cut(s)	1211, 1362, 1862
Eco31I	GGTCTC	1 cut(s)	1780
Eco47I	GGWCC	2 cut(s)	308, 1298
Eco53kI	GAGCTC	2 cut(s)	1360, 1860
Eco57I	CTGAAG	5 cut(s)	136, 363, 485, 488, 1415
EcoICRI	GAGCTC	2 cut(s)	1360, 1860
EcoRII	CCWGG	1 cut(s)	1564
EcoT14I	CCWWGG	8 cut(s)	88, 243, 384, 870, 976, 1212, 1482, 1706
EcoT38I	GRGCYC	3 cut(s)	1211, 1362, 1862
ErhI	CCWWGG	8 cut(s)	88, 243, 384, 870, 976, 1212, 1482, 1706
Esp3I	CGTCTC	1 cut(s)	1460
FaeI	CATG	7 cut(s)	16, 146, 175, 388, 862, 874, 1232
FaqI	GGGAC	1 cut(s)	352
FatI	CATG	7 cut(s)	12, 142, 171, 384, 858, 870, 1228
FauI	CCCGC	1 cut(s)	929
FbaI	TGATCA	1 cut(s)	889
Fnu4HI	GCNGC	7 cut(s)	381, 458, 486, 739, 1038, 1698, 1832
FokI	GGATG	5 cut(s)	209, 401, 853, 899, 1133
FriOI	GRGCYC	3 cut(s)	1211, 1362, 1862
Fsp4HI	GCNGC	7 cut(s)	381, 458, 486, 739, 1038, 1698, 1832
FspBI	CTAG	3 cut(s)	372, 1445, 1960
GlaI	GCGC	1 cut(s)	283
GluI	GCNGC	7 cut(s)	381, 458, 486, 739, 1038, 1698, 1832
GsaI	CCCAGC	1 cut(s)	339
GsuI	CTGGAG	3 cut(s)	549, 1713, 1886
HaeIII	GGCC	1 cut(s)	626
HapII	CCGG	2 cut(s)	837, 1324
HgaI	GACGC	1 cut(s)	1477
HhaI	GCGC	1 cut(s)	284
Hin1I	GRCGYC	1 cut(s)	1469
Hin1II	CATG	7 cut(s)	16, 146, 175, 388, 862, 874, 1232
Hin6I	GCGC	1 cut(s)	282
HinP1I	GCGC	1 cut(s)	282
HincII	GTYRAC	1 cut(s)	10
HindII	GTYRAC	1 cut(s)	10
HindIII	AAGCTT	4 cut(s)	164, 1625, 1659, 1739
HpaII	CCGG	2 cut(s)	837, 1324
HphI	GGTGA	6 cut(s)	146, 571, 874, 925, 1769, 1876
Hpy166II	GTNNAC	3 cut(s)	10, 931, 1453
Hpy188I	TCNGA	7 cut(s)	25, 155, 582, 961, 1395, 1420, 1952
Hpy188III	TCNNGA	5 cut(s)	400, 528, 893, 1229, 1324
Hpy8I	GTNNAC	3 cut(s)	10, 931, 1453
HpyAV	CCTTC	6 cut(s)	160, 509, 514, 550, 1708, 1789
HpyCH4III	ACNGT	2 cut(s)	1072, 1948
HpyCH4IV	ACGT	2 cut(s)	882, 1105
HpyF10VI	GCNNNNNNNGC	4 cut(s)	172, 494, 1046, 1610
HpyF3I	CTNAG	4 cut(s)	1064, 1586, 1737, 1924
HpySE526I	ACGT	2 cut(s)	882, 1105
Hsp92I	GRCGYC	1 cut(s)	1469
Hsp92II	CATG	7 cut(s)	16, 146, 175, 388, 862, 874, 1232
HspAI	GCGC	1 cut(s)	282
Kpn2I	TCCGGA	1 cut(s)	1323
Ksp22I	TGATCA	1 cut(s)	889
Kzo9I	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
LmnI	GCTCC	5 cut(s)	436, 530, 1214, 1694, 1839
Lsp1109I	GCAGC	6 cut(s)	367, 469, 472, 1049, 1684, 1843
LweI	GCATC	5 cut(s)	229, 1415, 1507, 1591, 1946
MaeI	CTAG	3 cut(s)	372, 1445, 1960
MaeII	ACGT	2 cut(s)	882, 1105
MaeIII	GTNAC	2 cut(s)	940, 1882
MalI	GATC	6 cut(s)	83, 370, 526, 818, 891, 1686
MbiI	CCGCTC	1 cut(s)	741
MboI	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
MflI	RGATCY	4 cut(s)	368, 524, 816, 1684
MhlI	GDGCHC	4 cut(s)	150, 1211, 1362, 1862
MlsI	TGGCCA	1 cut(s)	626
MluNI	TGGCCA	1 cut(s)	626
MlyI	GAGTC	4 cut(s)	179, 571, 1556, 1837
MmeI	TCCRAC	2 cut(s)	585, 693
Mox20I	TGGCCA	1 cut(s)	626
MroI	TCCGGA	1 cut(s)	1323
MscI	TGGCCA	1 cut(s)	626
MseI	TTAA	4 cut(s)	215, 324, 1001, 1901
Msp20I	TGGCCA	1 cut(s)	626
MspI	CCGG	2 cut(s)	837, 1324
MspR9I	CCNGG	2 cut(s)	838, 1566
Mva1269I	GAATGC	1 cut(s)	1815
MvaI	CCWGG	1 cut(s)	1566
MwoI	GCNNNNNNNGC	4 cut(s)	172, 494, 1046, 1610
NciI	CCSGG	1 cut(s)	838
NcoI	CCATGG	2 cut(s)	384, 870
NdeII	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
NlaIII	CATG	7 cut(s)	16, 146, 175, 388, 862, 874, 1232
NlaIV	GGNNCC	3 cut(s)	835, 1210, 1686
NmuCI	GTSAC	1 cut(s)	1882
NspI	RCATGY	1 cut(s)	146
NspV	TTCGAA	1 cut(s)	1413
PagI	TCATGA	1 cut(s)	1228
PaqCI	CACCTGC	1 cut(s)	1396
PciI	ACATGT	1 cut(s)	142
PctI	GAATGC	1 cut(s)	1815
PfeI	GAWTC	9 cut(s)	119, 137, 347, 789, 988, 1028, 1255, 1320, 1415
PflMI	CCANNNNNTGG	1 cut(s)	622
PkrI	GCNGC	7 cut(s)	382, 459, 487, 740, 1039, 1699, 1833
PleI	GAGTC	4 cut(s)	179, 571, 1555, 1837
PpsI	GAGTC	4 cut(s)	179, 571, 1555, 1837
PscI	ACATGT	1 cut(s)	142
Psp124BI	GAGCTC	2 cut(s)	1362, 1862
Psp6I	CCWGG	1 cut(s)	1564
PspFI	CCCAGC	1 cut(s)	335
PspGI	CCWGG	1 cut(s)	1564
PspN4I	GGNNCC	3 cut(s)	835, 1210, 1686
PspPI	GGNCC	2 cut(s)	308, 1298
PsrI	GAACNNNNNNTAC	2 cut(s)	1434, 1466
PstI	CTGCAG	2 cut(s)	358, 1702
PstNI	CAGNNNCTG	3 cut(s)	463, 580, 1388
PsuI	RGATCY	4 cut(s)	368, 524, 816, 1684
RsaI	GTAC	2 cut(s)	1452, 1704
RsaNI	GTAC	2 cut(s)	1451, 1703
SacI	GAGCTC	2 cut(s)	1362, 1862
SaqAI	TTAA	4 cut(s)	215, 324, 1001, 1901
SatI	GCNGC	7 cut(s)	381, 458, 486, 739, 1038, 1698, 1832
Sau3AI	GATC	6 cut(s)	81, 368, 524, 816, 889, 1684
Sau96I	GGNCC	2 cut(s)	308, 1298
SchI	GAGTC	4 cut(s)	179, 571, 1556, 1837
ScrFI	CCNGG	2 cut(s)	838, 1566
SduI	GDGCHC	4 cut(s)	150, 1211, 1362, 1862
SfaNI	GCATC	5 cut(s)	229, 1415, 1507, 1591, 1946
SfcI	CTRYAG	5 cut(s)	179, 354, 1014, 1351, 1698
SfuI	TTCGAA	1 cut(s)	1413
SinI	GGWCC	2 cut(s)	308, 1298
SmlI	CTYRAG	3 cut(s)	742, 1783, 1855
SmoI	CTYRAG	3 cut(s)	742, 1783, 1855
SsiI	CCGC	3 cut(s)	709, 739, 936
SspI	AATATT	1 cut(s)	31
SspMI	CTAG	3 cut(s)	372, 1445, 1960
SstI	GAGCTC	2 cut(s)	1362, 1862
StyD4I	CCNGG	2 cut(s)	836, 1564
StyI	CCWWGG	8 cut(s)	88, 243, 384, 870, 976, 1212, 1482, 1706
TaaI	ACNGT	2 cut(s)	1072, 1948
TaiI	ACGT	2 cut(s)	885, 1108
TaqI	TCGA	1 cut(s)	1413
TatI	WGTACW	1 cut(s)	1450
TauI	GCSGC	1 cut(s)	741
TfiI	GAWTC	9 cut(s)	119, 137, 347, 789, 988, 1028, 1255, 1320, 1415
Tru1I	TTAA	4 cut(s)	215, 324, 1001, 1901
Tru9I	TTAA	4 cut(s)	215, 324, 1001, 1901
TscAI	CASTG	5 cut(s)	832, 1075, 1519, 1696, 1869
TseFI	GTSAC	1 cut(s)	1882
TseI	GCWGC	6 cut(s)	380, 457, 485, 1037, 1697, 1831
Tsp45I	GTSAC	1 cut(s)	1882
TspDTI	ATGAA	6 cut(s)	339, 405, 579, 860, 1440, 1564
TspGWI	ACGGA	1 cut(s)	293
TspRI	CASTG	5 cut(s)	832, 1075, 1519, 1696, 1869
Van91I	CCANNNNNTGG	1 cut(s)	622
VpaK11BI	GGWCC	2 cut(s)	308, 1298
XapI	RAATTY	2 cut(s)	210, 392
XceI	RCATGY	1 cut(s)	146
XcmI	CCANNNNNNNNNTGG	2 cut(s)	808, 1771
XspI	CTAG	3 cut(s)	372, 1445, 1960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.