GATA transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 |
| rosa_chinensis | RchiOBHm_Chr4g0396691 |
| rosa_laevigata | RLG00000009509 |
| rosa_multiflora | Rmu_sc0006586.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00341540 |
| rosa_rugosa | Rorug03G0347800 Rorug03G0347900 |
| rosa_samantha | Rh4AG071300 Rh4BG069300 Rh4CG077100 Rh4DG066500 |
| rosa_wichuraiana | Rw4G005700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1080 |
| AarI | CACCTGC | 1 cut(s) | 2404 |
| Acc16I | TGCGCA | 1 cut(s) | 328 |
| Acc36I | ACCTGC | 2 cut(s) | 158, 2404 |
| AclWI | GGATC | 1 cut(s) | 3009 |
| AcoI | YGGCCR | 6 cut(s) | 30, 138, 186, 359, 1566, 2340 |
| AcsI | RAATTY | 6 cut(s) | 950, 1051, 1880, 2021, 2156, 2993 |
| AcuI | CTGAAG | 3 cut(s) | 447, 2814, 2898 |
| AdeI | CACNNNGTG | 1 cut(s) | 545 |
| AfaI | GTAC | 5 cut(s) | 623, 1574, 1735, 2845, 2990 |
| AflIII | ACRYGT | 2 cut(s) | 129, 819 |
| AgsI | TTSAA | 8 cut(s) | 693, 899, 1163, 1411, 1428, 1805, 2444, 2516 |
| AjiI | CACGTC | 1 cut(s) | 130 |
| AjnI | CCWGG | 6 cut(s) | 1002, 1663, 2119, 2555, 2617, 2946 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2871, 2903 |
| Alw21I | GWGCWC | 4 cut(s) | 539, 1841, 2117, 2552 |
| Alw26I | GTCTC | 5 cut(s) | 217, 223, 751, 2792, 3006 |
| Alw44I | GTGCAC | 1 cut(s) | 535 |
| AlwI | GGATC | 1 cut(s) | 3009 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 598, 970, 1114, 2176 |
| Ama87I | CYCGRG | 2 cut(s) | 1067, 2272 |
| AoxI | GGCC | 8 cut(s) | 30, 138, 186, 359, 1566, 1714, 1989, 2340 |
| ApaI | GGGCCC | 1 cut(s) | 1993 |
| ApaLI | GTGCAC | 1 cut(s) | 535 |
| ApoI | RAATTY | 6 cut(s) | 950, 1051, 1880, 2021, 2156, 2993 |
| AspLEI | GCGC | 4 cut(s) | 329, 1087, 1234, 1623 |
| AsuC2I | CCSGG | 2 cut(s) | 50, 412 |
| AsuHPI | GGTGA | 6 cut(s) | 478, 502, 526, 766, 1669, 2385 |
| AsuII | TTCGAA | 1 cut(s) | 3056 |
| AvaI | CYCGRG | 2 cut(s) | 1067, 2272 |
| BaeGI | GKGCMC | 2 cut(s) | 539, 1993 |
| BalI | TGGCCA | 3 cut(s) | 188, 1568, 2342 |
| BanII | GRGCYC | 9 cut(s) | 884, 1460, 1511, 1790, 1841, 1993, 2117, 2552, 2581 |
| BauI | CACGAG | 1 cut(s) | 1195 |
| BbsI | GAAGAC | 4 cut(s) | 435, 524, 1014, 1638 |
| Bbv12I | GWGCWC | 4 cut(s) | 539, 1841, 2117, 2552 |
| BbvCI | CCTCAGC | 1 cut(s) | 93 |
| BccI | CCATC | 5 cut(s) | 149, 1645, 2398, 2460, 2677 |
| BceAI | ACGGC | 1 cut(s) | 48 |
| BciT130I | CCWGG | 6 cut(s) | 1004, 1665, 2121, 2557, 2619, 2948 |
| BcnI | CCSGG | 2 cut(s) | 50, 412 |
| BcoDI | GTCTC | 5 cut(s) | 217, 223, 751, 2792, 3006 |
| BfaI | CTAG | 2 cut(s) | 89, 800 |
| BfmI | CTRYAG | 1 cut(s) | 1461 |
| BfoI | RGCGCY | 1 cut(s) | 1088 |
| BfuAI | ACCTGC | 2 cut(s) | 158, 2404 |
| BlpI | GCTNAGC | 3 cut(s) | 870, 1446, 2262 |
| Bme1390I | CCNGG | 8 cut(s) | 50, 412, 1004, 1665, 2121, 2557, 2619, 2948 |
| BmeT110I | CYCGRG | 2 cut(s) | 1067, 2272 |
| BmgBI | CACGTC | 1 cut(s) | 130 |
| BmrFI | CCNGG | 8 cut(s) | 50, 412, 1004, 1665, 2121, 2557, 2619, 2948 |
| BmsI | GCATC | 3 cut(s) | 1802, 1818, 2632 |
| BpiI | GAAGAC | 4 cut(s) | 435, 524, 1014, 1638 |
| BpmI | CTGGAG | 2 cut(s) | 1268, 2539 |
| Bpu10I | CCTNAGC | 2 cut(s) | 93, 2981 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 870, 1446, 2262 |
| Bpu14I | TTCGAA | 1 cut(s) | 3056 |
| BpuEI | CTTGAG | 4 cut(s) | 911, 1235, 2015, 3061 |
| BpuMI | CCSGG | 2 cut(s) | 50, 412 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2564 |
| BsaI | GGTCTC | 4 cut(s) | 217, 751, 2792, 3006 |
| BsaWI | WCCGGW | 1 cut(s) | 2434 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 544, 574, 2124, 2154 |
| Bse118I | RCCGGY | 4 cut(s) | 208, 1393, 1723, 2346 |
| Bse1I | ACTGG | 3 cut(s) | 15, 1897, 2871 |
| Bse3DI | GCAATG | 8 cut(s) | 254, 864, 1520, 1635, 1770, 2660, 2763, 2782 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2564 |
| BseBI | CCWGG | 6 cut(s) | 1004, 1665, 2121, 2557, 2619, 2948 |
| BseGI | GGATG | 3 cut(s) | 298, 1041, 2688 |
| BseJI | GATNNNNATC | 1 cut(s) | 2564 |
| BseMI | GCAATG | 8 cut(s) | 254, 864, 1520, 1635, 1770, 2660, 2763, 2782 |
| BseMII | CTCAG | 7 cut(s) | 84, 861, 947, 1437, 1761, 2253, 2907 |
| BseNI | ACTGG | 3 cut(s) | 15, 1897, 2871 |
| BseRI | GAGGAG | 4 cut(s) | 179, 258, 1831, 2542 |
| BseSI | GKGCMC | 2 cut(s) | 539, 1993 |
| BseYI | CCCAGC | 1 cut(s) | 59 |
| BsgI | GTGCAG | 1 cut(s) | 464 |
| BshFI | GGCC | 8 cut(s) | 32, 140, 188, 361, 1568, 1716, 1991, 2342 |
| BsiHKAI | GWGCWC | 4 cut(s) | 539, 1841, 2117, 2552 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1067, 2272 |
| BsmAI | GTCTC | 5 cut(s) | 217, 223, 751, 2792, 3006 |
| BsmI | GAATGC | 3 cut(s) | 688, 1423, 3052 |
| BsnI | GGCC | 8 cut(s) | 32, 140, 188, 361, 1568, 1716, 1991, 2342 |
| Bso31I | GGTCTC | 4 cut(s) | 217, 751, 2792, 3006 |
| BsoBI | CYCGRG | 2 cut(s) | 1067, 2272 |
| Bsp119I | TTCGAA | 1 cut(s) | 3056 |
| Bsp120I | GGGCCC | 1 cut(s) | 1989 |
| Bsp1407I | TGTACA | 1 cut(s) | 2843 |
| Bsp143I | GATC | 2 cut(s) | 717, 3001 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 870, 1446, 2262 |
| Bsp19I | CCATGG | 1 cut(s) | 583 |
| BspANI | GGCC | 8 cut(s) | 32, 140, 188, 361, 1568, 1716, 1991, 2342 |
| BspCNI | CTCAG | 7 cut(s) | 85, 862, 948, 1438, 1760, 2254, 2908 |
| BspHI | TCATGA | 7 cut(s) | 1047, 1368, 1698, 1833, 1974, 2109, 2544 |
| BspMI | ACCTGC | 2 cut(s) | 158, 2404 |
| BspPI | GGATC | 1 cut(s) | 3009 |
| BspQI | GCTCTTC | 3 cut(s) | 96, 464, 1778 |
| BspT104I | TTCGAA | 1 cut(s) | 3056 |
| BspTNI | GGTCTC | 4 cut(s) | 217, 751, 2792, 3006 |
| BsrDI | GCAATG | 8 cut(s) | 254, 864, 1520, 1635, 1770, 2660, 2763, 2782 |
| BsrFI | RCCGGY | 4 cut(s) | 208, 1393, 1723, 2346 |
| BsrGI | TGTACA | 1 cut(s) | 2843 |
| BsrI | ACTGG | 3 cut(s) | 15, 1897, 2871 |
| BssAI | RCCGGY | 4 cut(s) | 208, 1393, 1723, 2346 |
| BssMI | GATC | 2 cut(s) | 717, 3001 |
| BssSI | CACGAG | 1 cut(s) | 1195 |
| BssT1I | CCWWGG | 5 cut(s) | 372, 583, 1531, 2293, 2824 |
| Bst2BI | CACGAG | 1 cut(s) | 1195 |
| Bst2UI | CCWGG | 6 cut(s) | 1004, 1665, 2121, 2557, 2619, 2948 |
| Bst6I | CTCTTC | 6 cut(s) | 96, 305, 464, 1778, 2439, 2790 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 685 |
| BstAUI | TGTACA | 1 cut(s) | 2843 |
| BstBI | TTCGAA | 1 cut(s) | 3056 |
| BstDSI | CCRYGG | 2 cut(s) | 583, 2400 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 92 |
| BstF5I | GGATG | 3 cut(s) | 298, 1041, 2688 |
| BstH2I | RGCGCY | 1 cut(s) | 1088 |
| BstHHI | GCGC | 4 cut(s) | 329, 1087, 1234, 1623 |
| BstKTI | GATC | 2 cut(s) | 720, 3004 |
| BstMAI | GTCTC | 5 cut(s) | 217, 223, 751, 2792, 3006 |
| BstMBI | GATC | 2 cut(s) | 717, 3001 |
| BstNI | CCWGG | 6 cut(s) | 1004, 1665, 2121, 2557, 2619, 2948 |
| BstNSI | RCATGY | 3 cut(s) | 157, 823, 2976 |
| BstSCI | CCNGG | 8 cut(s) | 48, 410, 1002, 1663, 2119, 2555, 2617, 2946 |
| BstSFI | CTRYAG | 1 cut(s) | 1461 |
| BstSLI | GKGCMC | 2 cut(s) | 539, 1993 |
| BstV2I | GAAGAC | 4 cut(s) | 435, 524, 1014, 1638 |
| BstX2I | RGATCY | 1 cut(s) | 3001 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1493, 2255, 2909 |
| BstYI | RGATCY | 1 cut(s) | 3001 |
| BsuRI | GGCC | 8 cut(s) | 32, 140, 188, 361, 1568, 1716, 1991, 2342 |
| BtgI | CCRYGG | 2 cut(s) | 583, 2400 |
| BtrI | CACGTC | 1 cut(s) | 130 |
| BtsCI | GGATG | 3 cut(s) | 298, 1041, 2688 |
| BtsI | GCAGTG | 8 cut(s) | 572, 783, 1011, 1302, 1689, 2070, 2217, 3018 |
| BveI | ACCTGC | 2 cut(s) | 158, 2404 |
| CaiI | CAGNNNCTG | 4 cut(s) | 598, 970, 1114, 2176 |
| CciI | TCATGA | 7 cut(s) | 1047, 1368, 1698, 1833, 1974, 2109, 2544 |
| CfoI | GCGC | 4 cut(s) | 329, 1087, 1234, 1623 |
| Cfr10I | RCCGGY | 4 cut(s) | 208, 1393, 1723, 2346 |
| CseI | GACGC | 1 cut(s) | 1750 |
| Csp6I | GTAC | 5 cut(s) | 622, 1573, 1734, 2844, 2989 |
| CviQI | GTAC | 5 cut(s) | 622, 1573, 1734, 2844, 2989 |
| DpnI | GATC | 2 cut(s) | 719, 3003 |
| DpnII | GATC | 2 cut(s) | 717, 3001 |
| DraI | TTTAAA | 1 cut(s) | 2866 |
| DraIII | CACNNNGTG | 1 cut(s) | 545 |
| EaeI | YGGCCR | 6 cut(s) | 30, 138, 186, 359, 1566, 2340 |
| Eam1104I | CTCTTC | 6 cut(s) | 96, 305, 464, 1778, 2439, 2790 |
| EarI | CTCTTC | 6 cut(s) | 96, 305, 464, 1778, 2439, 2790 |
| EciI | GGCGGA | 2 cut(s) | 1600, 2695 |
| Ecl136II | GAGCTC | 3 cut(s) | 1839, 2115, 2550 |
| Eco130I | CCWWGG | 5 cut(s) | 372, 583, 1531, 2293, 2824 |
| Eco24I | GRGCYC | 9 cut(s) | 884, 1460, 1511, 1790, 1841, 1993, 2117, 2552, 2581 |
| Eco31I | GGTCTC | 4 cut(s) | 217, 751, 2792, 3006 |
| Eco53kI | GAGCTC | 3 cut(s) | 1839, 2115, 2550 |
| Eco57I | CTGAAG | 3 cut(s) | 447, 2814, 2898 |
| Eco88I | CYCGRG | 2 cut(s) | 1067, 2272 |
| EcoICRI | GAGCTC | 3 cut(s) | 1839, 2115, 2550 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 92 |
| EcoRI | GAATTC | 1 cut(s) | 1051 |
| EcoRII | CCWGG | 6 cut(s) | 1002, 1663, 2119, 2555, 2617, 2946 |
| EcoT14I | CCWWGG | 5 cut(s) | 372, 583, 1531, 2293, 2824 |
| EcoT22I | ATGCAT | 1 cut(s) | 2974 |
| EcoT38I | GRGCYC | 9 cut(s) | 884, 1460, 1511, 1790, 1841, 1993, 2117, 2552, 2581 |
| ErhI | CCWWGG | 5 cut(s) | 372, 583, 1531, 2293, 2824 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1585, 1617 |
| FauI | CCCGC | 5 cut(s) | 329, 1518, 1866, 2780, 2934 |
| FokI | GGATG | 3 cut(s) | 305, 1028, 2695 |
| FriOI | GRGCYC | 9 cut(s) | 884, 1460, 1511, 1790, 1841, 1993, 2117, 2552, 2581 |
| FspBI | CTAG | 2 cut(s) | 89, 800 |
| FspI | TGCGCA | 1 cut(s) | 328 |
| GlaI | GCGC | 4 cut(s) | 328, 1086, 1233, 1622 |
| GsaI | CCCAGC | 1 cut(s) | 63 |
| GsuI | CTGGAG | 2 cut(s) | 1268, 2539 |
| HaeII | RGCGCY | 1 cut(s) | 1088 |
| HaeIII | GGCC | 8 cut(s) | 32, 140, 188, 361, 1568, 1716, 1991, 2342 |
| HgaI | GACGC | 1 cut(s) | 1750 |
| HhaI | GCGC | 4 cut(s) | 329, 1087, 1234, 1623 |
| Hin6I | GCGC | 4 cut(s) | 327, 1085, 1232, 1621 |
| HinP1I | GCGC | 4 cut(s) | 327, 1085, 1232, 1621 |
| HincII | GTYRAC | 1 cut(s) | 1855 |
| HindII | GTYRAC | 1 cut(s) | 1855 |
| HinfI | GANTC | 2 cut(s) | 559, 1385 |
| HphI | GGTGA | 6 cut(s) | 478, 502, 526, 766, 1669, 2385 |
| Hpy166II | GTNNAC | 6 cut(s) | 537, 1575, 1855, 2412, 2761, 2846 |
| Hpy188I | TCNGA | 4 cut(s) | 957, 1750, 2696, 2794 |
| Hpy8I | GTNNAC | 6 cut(s) | 537, 1575, 1855, 2412, 2761, 2846 |
| HpyAV | CCTTC | 1 cut(s) | 700 |
| HpyCH4IV | ACGT | 2 cut(s) | 129, 671 |
| HpySE526I | ACGT | 2 cut(s) | 129, 671 |
| HspAI | GCGC | 4 cut(s) | 327, 1085, 1232, 1621 |
| KflI | GGGWCCC | 4 cut(s) | 368, 578, 1062, 1526 |
| KroI | GCCGGC | 1 cut(s) | 2346 |
| KroNI | GCCGGC | 1 cut(s) | 2348 |
| Kzo9I | GATC | 2 cut(s) | 717, 3001 |
| LguI | GCTCTTC | 3 cut(s) | 96, 464, 1778 |
| LweI | GCATC | 3 cut(s) | 1802, 1818, 2632 |
| MaeI | CTAG | 2 cut(s) | 89, 800 |
| MaeII | ACGT | 2 cut(s) | 129, 671 |
| MaeIII | GTNAC | 8 cut(s) | 6, 340, 458, 482, 977, 1904, 2183, 3062 |
| MalI | GATC | 2 cut(s) | 719, 3003 |
| MboI | GATC | 2 cut(s) | 717, 3001 |
| MfeI | CAATTG | 1 cut(s) | 2807 |
| MflI | RGATCY | 1 cut(s) | 3001 |
| MlsI | TGGCCA | 3 cut(s) | 188, 1568, 2342 |
| MluNI | TGGCCA | 3 cut(s) | 188, 1568, 2342 |
| MlyI | GAGTC | 2 cut(s) | 553, 1379 |
| MmeI | TCCRAC | 2 cut(s) | 144, 2353 |
| Mox20I | TGGCCA | 3 cut(s) | 188, 1568, 2342 |
| Mph1103I | ATGCAT | 1 cut(s) | 2974 |
| MroNI | GCCGGC | 1 cut(s) | 2346 |
| MscI | TGGCCA | 3 cut(s) | 188, 1568, 2342 |
| MseI | TTAA | 7 cut(s) | 453, 477, 501, 525, 1029, 1401, 2865 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1046, 1367, 2108, 2319 |
| Msp20I | TGGCCA | 3 cut(s) | 188, 1568, 2342 |
| MspA1I | CMGCKG | 4 cut(s) | 970, 1114, 1261, 2176 |
| MspR9I | CCNGG | 8 cut(s) | 50, 412, 1004, 1665, 2121, 2557, 2619, 2948 |
| MunI | CAATTG | 1 cut(s) | 2807 |
| Mva1269I | GAATGC | 3 cut(s) | 688, 1423, 3052 |
| MvaI | CCWGG | 6 cut(s) | 1004, 1665, 2121, 2557, 2619, 2948 |
| NaeI | GCCGGC | 1 cut(s) | 2348 |
| NciI | CCSGG | 2 cut(s) | 50, 412 |
| NcoI | CCATGG | 1 cut(s) | 583 |
| NdeII | GATC | 2 cut(s) | 717, 3001 |
| NgoMIV | GCCGGC | 1 cut(s) | 2346 |
| NmeAIII | GCCGAG | 5 cut(s) | 220, 300, 1801, 2512, 3035 |
| NmuCI | GTSAC | 4 cut(s) | 6, 458, 482, 1904 |
| NsbI | TGCGCA | 1 cut(s) | 328 |
| NsiI | ATGCAT | 1 cut(s) | 2974 |
| NspI | RCATGY | 3 cut(s) | 157, 823, 2976 |
| NspV | TTCGAA | 1 cut(s) | 3056 |
| PaeI | GCATGC | 1 cut(s) | 157 |
| PaeR7I | CTCGAG | 1 cut(s) | 1067 |
| PagI | TCATGA | 7 cut(s) | 1047, 1368, 1698, 1833, 1974, 2109, 2544 |
| PaqCI | CACCTGC | 1 cut(s) | 2404 |
| PasI | CCCWGGG | 1 cut(s) | 2947 |
| PciI | ACATGT | 1 cut(s) | 819 |
| PciSI | GCTCTTC | 3 cut(s) | 96, 464, 1778 |
| PctI | GAATGC | 3 cut(s) | 688, 1423, 3052 |
| PdiI | GCCGGC | 1 cut(s) | 2348 |
| PfoI | TCCNGGA | 1 cut(s) | 2555 |
| PleI | GAGTC | 2 cut(s) | 553, 1379 |
| PpsI | GAGTC | 2 cut(s) | 553, 1379 |
| PpuMI | RGGWCCY | 9 cut(s) | 368, 578, 1062, 1526, 1980, 2288, 2590, 2687, 2942 |
| PscI | ACATGT | 1 cut(s) | 819 |
| PsiI | TTATAA | 1 cut(s) | 1080 |
| Psp124BI | GAGCTC | 3 cut(s) | 1841, 2117, 2552 |
| Psp5II | RGGWCCY | 9 cut(s) | 368, 578, 1062, 1526, 1980, 2288, 2590, 2687, 2942 |
| Psp6I | CCWGG | 6 cut(s) | 1002, 1663, 2119, 2555, 2617, 2946 |
| PspFI | CCCAGC | 1 cut(s) | 59 |
| PspGI | CCWGG | 6 cut(s) | 1002, 1663, 2119, 2555, 2617, 2946 |
| PspOMI | GGGCCC | 1 cut(s) | 1989 |
| PspPPI | RGGWCCY | 9 cut(s) | 368, 578, 1062, 1526, 1980, 2288, 2590, 2687, 2942 |
| PspXI | VCTCGAGB | 1 cut(s) | 1067 |
| PstNI | CAGNNNCTG | 4 cut(s) | 598, 970, 1114, 2176 |
| PsuI | RGATCY | 1 cut(s) | 3001 |
| PvuII | CAGCTG | 4 cut(s) | 970, 1114, 1261, 2176 |
| RsaI | GTAC | 5 cut(s) | 623, 1574, 1735, 2845, 2990 |
| RsaNI | GTAC | 5 cut(s) | 622, 1573, 1734, 2844, 2989 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1046, 1367, 2108, 2319 |
| SacI | GAGCTC | 3 cut(s) | 1841, 2117, 2552 |
| SapI | GCTCTTC | 3 cut(s) | 96, 464, 1778 |
| SaqAI | TTAA | 7 cut(s) | 453, 477, 501, 525, 1029, 1401, 2865 |
| Sau3AI | GATC | 2 cut(s) | 717, 3001 |
| SchI | GAGTC | 2 cut(s) | 553, 1379 |
| ScrFI | CCNGG | 8 cut(s) | 50, 412, 1004, 1665, 2121, 2557, 2619, 2948 |
| SfaNI | GCATC | 3 cut(s) | 1802, 1818, 2632 |
| SfcI | CTRYAG | 1 cut(s) | 1461 |
| Sfr274I | CTCGAG | 1 cut(s) | 1067 |
| SfuI | TTCGAA | 1 cut(s) | 3056 |
| SlaI | CTCGAG | 1 cut(s) | 1067 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1046, 1367, 2108, 2319 |
| SmlI | CTYRAG | 5 cut(s) | 926, 1067, 1214, 1994, 3040 |
| SmoI | CTYRAG | 5 cut(s) | 926, 1067, 1214, 1994, 3040 |
| SphI | GCATGC | 1 cut(s) | 157 |
| SspMI | CTAG | 2 cut(s) | 89, 800 |
| SstI | GAGCTC | 3 cut(s) | 1841, 2117, 2552 |
| StyD4I | CCNGG | 8 cut(s) | 48, 410, 1002, 1663, 2119, 2555, 2617, 2946 |
| StyI | CCWWGG | 5 cut(s) | 372, 583, 1531, 2293, 2824 |
| TaiI | ACGT | 2 cut(s) | 132, 674 |
| TaqI | TCGA | 4 cut(s) | 144, 1068, 2420, 3056 |
| TatI | WGTACW | 2 cut(s) | 1572, 2843 |
| TauI | GCSGC | 3 cut(s) | 268, 418, 2757 |
| Tru1I | TTAA | 7 cut(s) | 453, 477, 501, 525, 1029, 1401, 2865 |
| Tru9I | TTAA | 7 cut(s) | 453, 477, 501, 525, 1029, 1401, 2865 |
| TseFI | GTSAC | 4 cut(s) | 6, 458, 482, 1904 |
| Tsp45I | GTSAC | 4 cut(s) | 6, 458, 482, 1904 |
| TspDTI | ATGAA | 5 cut(s) | 824, 1064, 1340, 1385, 1715 |
| TspGWI | ACGGA | 1 cut(s) | 2585 |
| VneI | GTGCAC | 1 cut(s) | 535 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 92 |
| XapI | RAATTY | 6 cut(s) | 950, 1051, 1880, 2021, 2156, 2993 |
| XceI | RCATGY | 3 cut(s) | 157, 823, 2976 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1330, 2195, 2878 |
| XhoI | CTCGAG | 1 cut(s) | 1067 |
| XspI | CTAG | 2 cut(s) | 89, 800 |
| Zsp2I | ATGCAT | 1 cut(s) | 2974 |