Rh4DG066500

GATA transcription factor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
9972764 .. 9978821
6058 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG066500.1

Sequence Viewer

Length: 3015 bp
ATGCTTGGTGATTTTGGGTTTTCATCTTGTGCTTTGCAGGAGAACCTAGCTGAGGAAGAAGAGCTGGAATGGCTATCCAACAAGGACCTGTTCCCGGCAGTCGAAACCTGCATGCTGACGGAGGAGCCACCAAAAAAGGCTATGGCCAATGCCGAGCAGGGGAAGCCGGTCTCTGTCTCGGTGGTTAAAGCAAGCATTGGAGGATGTGGAGCAGTACTATTGCCGCCAATGCCGAGCAGGAAAACAAAGGATGAGAGTGCCAAAGTGAAGAGTATGAGAGTTTGCGCATATTGCGGGGTTACACAGACCCCACAGTGGCCGGAGGGTCCCTTGGGGATATGTAATGCCTGCGGTTTTAGCTACAAGTCCGGGCGGCTTTGCACTGAAGACAGTCCCAAAGTGCAGAGCATTAAGAGTGACAAGGTGAATGGAATTAAGAGTGACAAGGTGAAGACCATTAAGAGAAAGTGCACACATTGTGGGATTACACAGACTCCGCAGTGGCGGTTGGGTCCCCTTGGACTGCAGACCCTGTGTAATGCTTGTGGGGTTAGGTACAAGTCTGGGAGGCTTTGCCCCGAATACCGCCCTGCAAATAGCCCTACGTTCTCGCAGGAGTTGCATTCGAATAAGCACAGGAAGGTAATGGAGATCAGGAAGCAAATCTATGGGAATGAGGGGACGGTGGCGAGACCTGTGGATAAATGCACAAACAGTGCCGCCACCACTGCCCTAGAGAAGATGAAGAAAGACATGTTCCCGACTGTCACAACAGTGGAGCAACCAAGAAGAAGTGTCATTGCTGAGCAGCAGAGCCCTGTTTCGGTGCTTGAAAACAGCACAAACAGCAGCACCACCCTCAAGCCCCACCAACCCCCAAGCAAATTTCTGAGGGAGCAGCAGCTGTTCTGTAACCAACCTAACAATAAGCACAACCAGGAAGACACTGCCAAAGTGGAAATTAAGAGAAACATCATCCTCATGAGTTCCTGTGGGACCCTCGAGCTGCCTTATAAAGCACCAAGCAAAGTTTTGGGGCAGCAGCAGCTGTTTAGTTGCCAACCTACCAGCAAACGCAGAAAGAAAAACACTGTTGAAATGAAGAATGAGGGAAACCACGCCACCCTCACGAGTTCCTGTGGGAACCTTGAGCCGCCTCACCAAGCGCCAAGTCAATTTCTGGAGCAGCACCAGCTGTTTTATGACCAACCTAACAACAAGTGCAACAAGAAACACACTACCAAAGTGGAGATGACCATGAAACCTGTGGATATATGCAACACCACCCTCATGAAGTCTAAGAAAGACTCATTACCGGCTGTCGAAACATTGAATATCTTGGAGCATTCAAGAGGCATTTTTATTGCTGAGCAGCAGAGCCCTGTAGTGGGGATTGCGGTAAATTGCCAGAATTGTGGTGCTGAACAGAGCCCGCAATGGTGGGAGGGTCCCCTTGGACCCAAAACCATATGTCTTTCCTGTGGGCTGGCCAAGTACACAGGCAGGCGGAAAAGAAGTATGTCTTTAGTTTCTAACAAGAAGCGCAAAAAGAAAGACATTGCGAAAGTGGAGATGGCAGTGAAACCTGGTGATAAATGCACAAACAGCACCACTGCCCTCATGAACTCCAAGAAAGACCCCTCACCGGCTGTCGGTACATCGAATATCTCAGAGCAACCAAGCGTCATTGTCATTGCCGAGCAGCAGAGCCCTGCATCTGTGGTTGAAAACAGCATAAGCAGCAGCATGATGCTCATGAGCTCCTCTGGGACTGTCAACCTGCACAACCAAGCCCCAAGCGAATTTCCGCAGCAGAACCAGTTTTGTGACCAAGCTAACAACAAGCCCAAAGAGAAAGACACTACCACAGTGGAGTTTGAGGGAAACAGCTCTACCCTCATGAGGTCCTCTGGGGCGCTTGAGCTGCTCCACCAAGCTCCAAACGAATTTCTGGACCAGCAGCAGCAAGCTAAGAACAAGCCCAACAAGAAAGACACTGCTAAAGTGGAGAGTGAGGGAAACAGCACCACCCTCATGAGCTCTTGTGGGACTAACAAACCGCCCGACCAAGCACAGAGCGAATTTCTGGGGCAACAGCAGCTGTTTTGTAACCAAGCTAACAATGGGACCAAAAAGGAAAACACTGCCGAAGGGGAGAGTGAGGGGAAGTGCCAGAATTGTGGGGCTGAGCAAACCCCGAGTTGGTTGGGAGGTCCCCTTGGACCAAAAACCCTATGTCATGCCTGTGGGCTGGCTAAGTGCACGGCCGGCCGGCAAAGAAGTATTGCTGTGGAGGTTGGAAAACTGCCCTGTCCATCACCTGCTACGGGAGAGTTTACTAATTCGACTTGCACTTTTCCGGTTCTTGAAGAGTTCCATCTCTCGCAGAAACCAAGCGACATAGCCAATGCCGAGCAACAGAAACCTTTTTCAGTTCTTGAAAGCAGCACAAACAACAGCATAGCCCTCATGAGCTCCTGCAGGATAAAAATCCCCCACCGAGCCCGAAGCAAGGTCCTCCGTAGAAGAAGAAGCACAATTCCAGGGCAGCAAGTTGGGATTGGAAAAAACTGTATGCAATGCGGAAAACAGACAAATAGATGGCGGATGGGTCCCCTCGGACCCACAACTCTATGTAATGCCTGTGGGAATAAGTATCAGCCCTTGTGGGGAAGAAGCGGCGTAACAGTGGACATTGCCAAAAACTGTCATCATTGCGGGTCTGAGGAGACCACGCAATTACTATTGTGTCCCCTTGGACCCAAAACCCTATGTACATTCTGTTATCATTGGTTTAAAGCCAGTGCTGAAGTGGAGATTGGGAGAAAATGCCAGCATTGTGGGGCTGAGAAAACCCCGCTTTGGCGGTCAGGTCCCCTGGGTTCCAAAACGCTGTGTAATGCATGTGGGCTTAGGTGGTACAAATTCGGGGATCTTTGCCGAGACCGCTCTGCAAGTAGCCCAACTCTCTTGAGGGAGTTGCATTCAAATTGTTACAGGAATGTGCTGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1004

Amino Acids

110.22

Weight (kDa)

9.09

Isoelectric Point (pI)

61.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GATA PF00320 95 - 126 1.7e-06 GATA zinc finger
GATA PF00320 157 - 191 2.2e-12 GATA zinc finger
GATA PF00320 469 - 497 4.7e-07 GATA zinc finger
GATA PF00320 724 - 752 7.8e-07 GATA zinc finger
GATA PF00320 944 - 975 4.9e-14 GATA zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1014
AarI CACCTGC 1 cut(s) 2329
Acc16I TGCGCA 1 cut(s) 286
Acc36I ACCTGC 3 cut(s) 116, 1788, 2329
AccBSI CCGCTC 1 cut(s) 2949
AclWI GGATC 1 cut(s) 2940
AcoI YGGCCR 5 cut(s) 144, 317, 1488, 2265, 2269
AcsI RAATTY 5 cut(s) 884, 1802, 1946, 2081, 2924
AcuI CTGAAG 2 cut(s) 405, 2829
AdeI CACNNNGTG 1 cut(s) 479
AfaI GTAC 6 cut(s) 216, 557, 1496, 1657, 2776, 2921
AflIII ACRYGT 1 cut(s) 753
AgsI TTSAA 8 cut(s) 833, 1097, 1333, 1350, 1727, 2369, 2441, 2988
AjnI CCWGG 4 cut(s) 936, 1585, 2542, 2877
AjuI GAANNNNNNNTTGG 2 cut(s) 2802, 2834
AleI CACNNNNGTG 1 cut(s) 773
Alw21I GWGCWC 5 cut(s) 473, 1763, 2042, 2264, 2477
Alw26I GTCTC 5 cut(s) 175, 181, 685, 2723, 2937
Alw44I GTGCAC 2 cut(s) 469, 2260
AlwI GGATC 1 cut(s) 2940
AlwNI CAGNNNCTG 4 cut(s) 532, 904, 1048, 2101
Ama87I CYCGRG 2 cut(s) 1001, 2197
AoxI GGCC 5 cut(s) 144, 317, 1488, 2265, 2269
ApaLI GTGCAC 2 cut(s) 469, 2260
ApoI RAATTY 5 cut(s) 884, 1802, 1946, 2081, 2924
AspLEI GCGC 4 cut(s) 287, 1168, 1545, 1918
AsuC2I CCSGG 2 cut(s) 95, 370
AsuHPI GGTGA 7 cut(s) 20, 436, 460, 1151, 1601, 1635, 2310
AsuII TTCGAA 1 cut(s) 626
AvaI CYCGRG 2 cut(s) 1001, 2197
BaeGI GKGCMC 2 cut(s) 473, 2264
BalI TGGCCA 2 cut(s) 146, 1490
BanII GRGCYC 8 cut(s) 818, 1382, 1433, 1712, 1763, 2042, 2477, 2506
BauI CACGAG 1 cut(s) 1129
BbsI GAAGAC 3 cut(s) 393, 458, 948
Bbv12I GWGCWC 5 cut(s) 473, 1763, 2042, 2264, 2477
BbvCI CCTCAGC 1 cut(s) 51
BccI CCATC 5 cut(s) 1567, 2323, 2385, 2595, 2602
BceAI ACGGC 1 cut(s) 2280
BciT130I CCWGG 4 cut(s) 938, 1587, 2544, 2879
BcnI CCSGG 2 cut(s) 95, 370
BcoDI GTCTC 5 cut(s) 175, 181, 685, 2723, 2937
BfaI CTAG 2 cut(s) 47, 734
BfmI CTRYAG 3 cut(s) 524, 1383, 2479
BfoI RGCGCY 2 cut(s) 1169, 1919
BfuAI ACCTGC 3 cut(s) 116, 1788, 2329
BlpI GCTNAGC 3 cut(s) 804, 1368, 2187
BmcAI AGTACT 1 cut(s) 216
Bme1390I CCNGG 6 cut(s) 95, 370, 938, 1587, 2544, 2879
BmeT110I CYCGRG 2 cut(s) 1001, 2197
BmrFI CCNGG 6 cut(s) 95, 370, 938, 1587, 2544, 2879
BmsI GCATC 2 cut(s) 1724, 1740
BpiI GAAGAC 3 cut(s) 393, 458, 948
BpmI CTGGAG 1 cut(s) 1202
Bpu10I CCTNAGC 2 cut(s) 51, 2912
Bpu1102I GCTNAGC 3 cut(s) 804, 1368, 2187
Bpu14I TTCGAA 1 cut(s) 626
BpuEI CTTGAG 4 cut(s) 845, 1169, 1940, 2992
BpuMI CCSGG 2 cut(s) 95, 370
BsaBI GATNNNNATC 1 cut(s) 2489
BsaI GGTCTC 4 cut(s) 175, 685, 2723, 2937
BsaJI CCNNGG 9 cut(s) 330, 517, 1453, 2218, 2543, 2617, 2755, 2877, 2878
BsaWI WCCGGW 1 cut(s) 2359
BsaXI ACNNNNNCTCC 2 cut(s) 478, 508
Bse118I RCCGGY 5 cut(s) 166, 1315, 1645, 2267, 2271
Bse1I ACTGG 2 cut(s) 1819, 2802
Bse3DI GCAATG 7 cut(s) 798, 1442, 1557, 1692, 2585, 2694, 2713
Bse8I GATNNNNATC 1 cut(s) 2489
BseBI CCWGG 4 cut(s) 938, 1587, 2544, 2879
BseDI CCNNGG 9 cut(s) 330, 517, 1453, 2218, 2543, 2617, 2755, 2877, 2878
BseGI GGATG 4 cut(s) 209, 256, 975, 2613
BseJI GATNNNNATC 1 cut(s) 2489
BseMI GCAATG 7 cut(s) 798, 1442, 1557, 1692, 2585, 2694, 2713
BseMII CTCAG 8 cut(s) 42, 795, 881, 1359, 1683, 2178, 2715, 2838
BseNI ACTGG 2 cut(s) 1819, 2802
BseRI GAGGAG 3 cut(s) 137, 1753, 2741
BseSI GKGCMC 2 cut(s) 473, 2264
BseX3I CGGCCG 2 cut(s) 2265, 2269
BsgI GTGCAG 2 cut(s) 422, 1766
Bsh1285I CGRYCG 2 cut(s) 2268, 2272
BshFI GGCC 5 cut(s) 146, 319, 1490, 2267, 2271
BsiEI CGRYCG 2 cut(s) 2268, 2272
BsiHKAI GWGCWC 5 cut(s) 473, 1763, 2042, 2264, 2477
BsiHKCI CYCGRG 2 cut(s) 1001, 2197
BsiSI CCGG 9 cut(s) 95, 167, 320, 369, 1316, 1646, 2268, 2272, 2360
BsmAI GTCTC 5 cut(s) 175, 181, 685, 2723, 2937
BsmI GAATGC 3 cut(s) 622, 1345, 2983
BsnI GGCC 5 cut(s) 146, 319, 1490, 2267, 2271
Bso31I GGTCTC 4 cut(s) 175, 685, 2723, 2937
BsoBI CYCGRG 2 cut(s) 1001, 2197
Bsp119I TTCGAA 1 cut(s) 626
Bsp1407I TGTACA 1 cut(s) 2774
Bsp143I GATC 2 cut(s) 651, 2932
Bsp1720I GCTNAGC 3 cut(s) 804, 1368, 2187
BspANI GGCC 5 cut(s) 146, 319, 1490, 2267, 2271
BspCNI CTCAG 8 cut(s) 43, 796, 882, 1360, 1682, 2179, 2716, 2839
BspHI TCATGA 7 cut(s) 981, 1290, 1620, 1755, 1899, 2034, 2469
BspMAI CTGCAG 2 cut(s) 528, 2483
BspMI ACCTGC 3 cut(s) 116, 1788, 2329
BspPI GGATC 1 cut(s) 2940
BspQI GCTCTTC 1 cut(s) 54
BspT104I TTCGAA 1 cut(s) 626
BspTNI GGTCTC 4 cut(s) 175, 685, 2723, 2937
BsrBI CCGCTC 1 cut(s) 2949
BsrDI GCAATG 7 cut(s) 798, 1442, 1557, 1692, 2585, 2694, 2713
BsrFI RCCGGY 5 cut(s) 166, 1315, 1645, 2267, 2271
BsrGI TGTACA 1 cut(s) 2774
BsrI ACTGG 2 cut(s) 1819, 2802
BssAI RCCGGY 5 cut(s) 166, 1315, 1645, 2267, 2271
BssECI CCNNGG 9 cut(s) 330, 517, 1453, 2218, 2543, 2617, 2755, 2877, 2878
BssMI GATC 2 cut(s) 651, 2932
BssSI CACGAG 1 cut(s) 1129
BssT1I CCWWGG 5 cut(s) 330, 517, 1453, 2218, 2755
Bst2BI CACGAG 1 cut(s) 1129
Bst2UI CCWGG 4 cut(s) 938, 1587, 2544, 2879
Bst6I CTCTTC 3 cut(s) 54, 263, 2364
BstAPI GCANNNNNTGC 1 cut(s) 619
BstAUI TGTACA 1 cut(s) 2774
BstBI TTCGAA 1 cut(s) 626
BstENI CCTNNNNNAGG 1 cut(s) 50
BstF5I GGATG 4 cut(s) 209, 256, 975, 2613
BstH2I RGCGCY 2 cut(s) 1169, 1919
BstHHI GCGC 4 cut(s) 287, 1168, 1545, 1918
BstKTI GATC 2 cut(s) 654, 2935
BstMAI GTCTC 5 cut(s) 175, 181, 685, 2723, 2937
BstMBI GATC 2 cut(s) 651, 2932
BstMCI CGRYCG 2 cut(s) 2268, 2272
BstNI CCWGG 4 cut(s) 938, 1587, 2544, 2879
BstNSI RCATGY 3 cut(s) 115, 757, 2907
BstSCI CCNGG 6 cut(s) 93, 368, 936, 1585, 2542, 2877
BstSFI CTRYAG 3 cut(s) 524, 1383, 2479
BstSLI GKGCMC 2 cut(s) 473, 2264
BstV2I GAAGAC 3 cut(s) 393, 458, 948
BstX2I RGATCY 1 cut(s) 2932
BstXI CCANNNNNNTGG 3 cut(s) 1415, 2180, 2840
BstYI RGATCY 1 cut(s) 2932
BstZI CGGCCG 2 cut(s) 2265, 2269
BsuRI GGCC 5 cut(s) 146, 319, 1490, 2267, 2271
BtsCI GGATG 4 cut(s) 209, 256, 975, 2613
BtsI GCAGTG 7 cut(s) 506, 726, 945, 1584, 1611, 1995, 2142
BveI ACCTGC 3 cut(s) 116, 1788, 2329
CaiI CAGNNNCTG 4 cut(s) 532, 904, 1048, 2101
CciI TCATGA 7 cut(s) 981, 1290, 1620, 1755, 1899, 2034, 2469
CfoI GCGC 4 cut(s) 287, 1168, 1545, 1918
Cfr10I RCCGGY 5 cut(s) 166, 1315, 1645, 2267, 2271
CseI GACGC 1 cut(s) 1672
CsiI ACCWGGT 1 cut(s) 1585
Csp6I GTAC 6 cut(s) 215, 556, 1495, 1656, 2775, 2920
CviQI GTAC 6 cut(s) 215, 556, 1495, 1656, 2775, 2920
DpnI GATC 2 cut(s) 653, 2934
DpnII GATC 2 cut(s) 651, 2932
DraI TTTAAA 1 cut(s) 2797
DraIII CACNNNGTG 1 cut(s) 479
EaeI YGGCCR 5 cut(s) 144, 317, 1488, 2265, 2269
EagI CGGCCG 2 cut(s) 2265, 2269
Eam1104I CTCTTC 3 cut(s) 54, 263, 2364
EarI CTCTTC 3 cut(s) 54, 263, 2364
EciI GGCGGA 2 cut(s) 1522, 2620
Ecl136II GAGCTC 3 cut(s) 1761, 2040, 2475
EclXI CGGCCG 2 cut(s) 2265, 2269
Eco130I CCWWGG 5 cut(s) 330, 517, 1453, 2218, 2755
Eco24I GRGCYC 8 cut(s) 818, 1382, 1433, 1712, 1763, 2042, 2477, 2506
Eco31I GGTCTC 4 cut(s) 175, 685, 2723, 2937
Eco52I CGGCCG 2 cut(s) 2265, 2269
Eco53kI GAGCTC 3 cut(s) 1761, 2040, 2475
Eco57I CTGAAG 2 cut(s) 405, 2829
Eco88I CYCGRG 2 cut(s) 1001, 2197
EcoICRI GAGCTC 3 cut(s) 1761, 2040, 2475
EcoNI CCTNNNNNAGG 1 cut(s) 50
EcoRII CCWGG 4 cut(s) 936, 1585, 2542, 2877
EcoT14I CCWWGG 5 cut(s) 330, 517, 1453, 2218, 2755
EcoT22I ATGCAT 1 cut(s) 2905
EcoT38I GRGCYC 8 cut(s) 818, 1382, 1433, 1712, 1763, 2042, 2477, 2506
ErhI CCWWGG 5 cut(s) 330, 517, 1453, 2218, 2755
FalI AAGNNNNNCTT 2 cut(s) 1507, 1539
FauI CCCGC 4 cut(s) 287, 1440, 2711, 2865
FauNDI CATATG 1 cut(s) 1469
FokI GGATG 4 cut(s) 216, 263, 962, 2620
FriOI GRGCYC 8 cut(s) 818, 1382, 1433, 1712, 1763, 2042, 2477, 2506
FseI GGCCGGCC 1 cut(s) 2271
FspBI CTAG 2 cut(s) 47, 734
FspI TGCGCA 1 cut(s) 286
GlaI GCGC 4 cut(s) 286, 1167, 1544, 1917
GsuI CTGGAG 1 cut(s) 1202
HaeII RGCGCY 2 cut(s) 1169, 1919
HaeIII GGCC 5 cut(s) 146, 319, 1490, 2267, 2271
HapII CCGG 9 cut(s) 95, 167, 320, 369, 1316, 1646, 2268, 2272, 2360
HgaI GACGC 1 cut(s) 1672
HhaI GCGC 4 cut(s) 287, 1168, 1545, 1918
Hin6I GCGC 4 cut(s) 285, 1166, 1543, 1916
HinP1I GCGC 4 cut(s) 285, 1166, 1543, 1916
HincII GTYRAC 1 cut(s) 1777
HindII GTYRAC 1 cut(s) 1777
HinfI GANTC 2 cut(s) 493, 1307
HpaII CCGG 9 cut(s) 95, 167, 320, 369, 1316, 1646, 2268, 2272, 2360
HphI GGTGA 7 cut(s) 20, 436, 460, 1151, 1601, 1635, 2310
Hpy166II GTNNAC 6 cut(s) 471, 1497, 1777, 2262, 2337, 2692
Hpy188I TCNGA 4 cut(s) 891, 1672, 2621, 2725
Hpy8I GTNNAC 6 cut(s) 471, 1497, 1777, 2262, 2337, 2692
HpyAV CCTTC 2 cut(s) 634, 2144
HpyCH4IV ACGT 1 cut(s) 605
HpySE526I ACGT 1 cut(s) 605
HspAI GCGC 4 cut(s) 285, 1166, 1543, 1916
KflI GGGWCCC 5 cut(s) 326, 512, 996, 1448, 2612
KroI GCCGGC 2 cut(s) 2267, 2271
KroNI GCCGGC 2 cut(s) 2269, 2273
Kzo9I GATC 2 cut(s) 651, 2932
LguI GCTCTTC 1 cut(s) 54
LweI GCATC 2 cut(s) 1724, 1740
MabI ACCWGGT 1 cut(s) 1585
MaeI CTAG 2 cut(s) 47, 734
MaeII ACGT 1 cut(s) 605
MaeIII GTNAC 9 cut(s) 298, 416, 440, 766, 911, 1826, 2108, 2683, 2993
MalI GATC 2 cut(s) 653, 2934
MbiI CCGCTC 1 cut(s) 2949
MboI GATC 2 cut(s) 651, 2932
MflI RGATCY 1 cut(s) 2932
MlsI TGGCCA 2 cut(s) 146, 1490
MluNI TGGCCA 2 cut(s) 146, 1490
MlyI GAGTC 2 cut(s) 487, 1301
MmeI TCCRAC 2 cut(s) 102, 2278
Mox20I TGGCCA 2 cut(s) 146, 1490
Mph1103I ATGCAT 1 cut(s) 2905
MroNI GCCGGC 2 cut(s) 2267, 2271
MscI TGGCCA 2 cut(s) 146, 1490
MseI TTAA 6 cut(s) 186, 411, 435, 459, 963, 2796
MslI CAYNNNNRTG 5 cut(s) 773, 980, 1289, 2033, 2244
Msp20I TGGCCA 2 cut(s) 146, 1490
MspA1I CMGCKG 4 cut(s) 904, 1048, 1195, 2101
MspI CCGG 9 cut(s) 95, 167, 320, 369, 1316, 1646, 2268, 2272, 2360
MspR9I CCNGG 6 cut(s) 95, 370, 938, 1587, 2544, 2879
Mva1269I GAATGC 3 cut(s) 622, 1345, 2983
MvaI CCWGG 4 cut(s) 938, 1587, 2544, 2879
NaeI GCCGGC 2 cut(s) 2269, 2273
NciI CCSGG 2 cut(s) 95, 370
NdeI CATATG 1 cut(s) 1469
NdeII GATC 2 cut(s) 651, 2932
NgoMIV GCCGGC 2 cut(s) 2267, 2271
NmeAIII GCCGAG 5 cut(s) 178, 258, 1723, 2437, 2966
NmuCI GTSAC 4 cut(s) 416, 440, 766, 1826
NsbI TGCGCA 1 cut(s) 286
NsiI ATGCAT 1 cut(s) 2905
NspI RCATGY 3 cut(s) 115, 757, 2907
NspV TTCGAA 1 cut(s) 626
OliI CACNNNNGTG 1 cut(s) 773
PaeI GCATGC 1 cut(s) 115
PaeR7I CTCGAG 1 cut(s) 1001
PagI TCATGA 7 cut(s) 981, 1290, 1620, 1755, 1899, 2034, 2469
PaqCI CACCTGC 1 cut(s) 2329
PasI CCCWGGG 1 cut(s) 2878
PciI ACATGT 1 cut(s) 753
PciSI GCTCTTC 1 cut(s) 54
PctI GAATGC 3 cut(s) 622, 1345, 2983
PdiI GCCGGC 2 cut(s) 2269, 2273
PleI GAGTC 2 cut(s) 487, 1301
PpsI GAGTC 2 cut(s) 487, 1301
PscI ACATGT 1 cut(s) 753
PsiI TTATAA 1 cut(s) 1014
Psp124BI GAGCTC 3 cut(s) 1763, 2042, 2477
Psp6I CCWGG 4 cut(s) 936, 1585, 2542, 2877
PspGI CCWGG 4 cut(s) 936, 1585, 2542, 2877
PspXI VCTCGAGB 1 cut(s) 1001
PstI CTGCAG 2 cut(s) 528, 2483
PstNI CAGNNNCTG 4 cut(s) 532, 904, 1048, 2101
PsuI RGATCY 1 cut(s) 2932
PvuII CAGCTG 4 cut(s) 904, 1048, 1195, 2101
RigI GGCCGGCC 1 cut(s) 2271
RsaI GTAC 6 cut(s) 216, 557, 1496, 1657, 2776, 2921
RsaNI GTAC 6 cut(s) 215, 556, 1495, 1656, 2775, 2920
RseI CAYNNNNRTG 5 cut(s) 773, 980, 1289, 2033, 2244
SacI GAGCTC 3 cut(s) 1763, 2042, 2477
SapI GCTCTTC 1 cut(s) 54
SaqAI TTAA 6 cut(s) 186, 411, 435, 459, 963, 2796
Sau3AI GATC 2 cut(s) 651, 2932
SbfI CCTGCAGG 1 cut(s) 2483
ScaI AGTACT 1 cut(s) 216
SchI GAGTC 2 cut(s) 487, 1301
ScrFI CCNGG 6 cut(s) 95, 370, 938, 1587, 2544, 2879
SdaI CCTGCAGG 1 cut(s) 2483
SexAI ACCWGGT 1 cut(s) 1585
SfaNI GCATC 2 cut(s) 1724, 1740
SfcI CTRYAG 3 cut(s) 524, 1383, 2479
Sfr274I CTCGAG 1 cut(s) 1001
SfuI TTCGAA 1 cut(s) 626
SlaI CTCGAG 1 cut(s) 1001
SmiMI CAYNNNNRTG 5 cut(s) 773, 980, 1289, 2033, 2244
SmlI CTYRAG 5 cut(s) 860, 1001, 1148, 1919, 2971
SmoI CTYRAG 5 cut(s) 860, 1001, 1148, 1919, 2971
SphI GCATGC 1 cut(s) 115
Sse8387I CCTGCAGG 1 cut(s) 2483
SspMI CTAG 2 cut(s) 47, 734
SstI GAGCTC 3 cut(s) 1763, 2042, 2477
StyD4I CCNGG 6 cut(s) 93, 368, 936, 1585, 2542, 2877
StyI CCWWGG 5 cut(s) 330, 517, 1453, 2218, 2755
TaiI ACGT 1 cut(s) 608
TaqI TCGA 6 cut(s) 102, 626, 1002, 1323, 1661, 2345
TatI WGTACW 3 cut(s) 214, 1494, 2774
TauI GCSGC 5 cut(s) 226, 376, 722, 1156, 2682
Tru1I TTAA 6 cut(s) 186, 411, 435, 459, 963, 2796
Tru9I TTAA 6 cut(s) 186, 411, 435, 459, 963, 2796
TseFI GTSAC 4 cut(s) 416, 440, 766, 1826
Tsp45I GTSAC 4 cut(s) 416, 440, 766, 1826
TspDTI ATGAA 6 cut(s) 12, 758, 1115, 1274, 1307, 1637
TspGWI ACGGA 2 cut(s) 134, 2510
VneI GTGCAC 2 cut(s) 469, 2260
XagI CCTNNNNNAGG 1 cut(s) 50
XapI RAATTY 5 cut(s) 884, 1802, 1946, 2081, 2924
XceI RCATGY 3 cut(s) 115, 757, 2907
XcmI CCANNNNNNNNNTGG 3 cut(s) 1264, 2120, 2809
XhoI CTCGAG 1 cut(s) 1001
XspI CTAG 2 cut(s) 47, 734
ZrmI AGTACT 1 cut(s) 216
Zsp2I ATGCAT 1 cut(s) 2905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.