GATA transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 FvH4_4g05580 |
| rosa_chinensis | RchiOBHm_Chr4g0396691 |
| rosa_laevigata | RLG00000009509 |
| rosa_multiflora | Rmu_sc0006586.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00341540 |
| rosa_rugosa | Rorug03G0347800 Rorug03G0347900 |
| rosa_samantha | Rh4AG071300 Rh4BG069300 Rh4CG077100 Rh4DG066500 |
| rosa_wichuraiana | Rw4G005700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1071 |
| AarI | CACCTGC | 1 cut(s) | 2383 |
| Acc16I | TGCGCA | 1 cut(s) | 319 |
| Acc36I | ACCTGC | 3 cut(s) | 158, 1842, 2383 |
| AccBSI | CCGCTC | 1 cut(s) | 3003 |
| AclWI | GGATC | 1 cut(s) | 2994 |
| AcoI | YGGCCR | 6 cut(s) | 30, 138, 350, 1542, 2319, 2323 |
| AcsI | RAATTY | 5 cut(s) | 941, 1856, 2000, 2135, 2978 |
| AcuI | CTGAAG | 3 cut(s) | 438, 2799, 2883 |
| AdeI | CACNNNGTG | 1 cut(s) | 536 |
| AfaI | GTAC | 5 cut(s) | 614, 1550, 1711, 2830, 2975 |
| AflIII | ACRYGT | 2 cut(s) | 129, 810 |
| AgsI | TTSAA | 8 cut(s) | 890, 1154, 1387, 1404, 1781, 2400, 2423, 2495 |
| AjiI | CACGTC | 1 cut(s) | 130 |
| AjnI | CCWGG | 4 cut(s) | 993, 1639, 2596, 2931 |
| Alw21I | GWGCWC | 6 cut(s) | 256, 530, 1817, 2096, 2318, 2531 |
| Alw26I | GTCTC | 4 cut(s) | 217, 223, 2777, 2991 |
| Alw44I | GTGCAC | 2 cut(s) | 526, 2314 |
| AlwI | GGATC | 1 cut(s) | 2994 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 589, 961, 1105, 2155 |
| Ama87I | CYCGRG | 3 cut(s) | 1058, 1849, 2251 |
| ApaI | GGGCCC | 1 cut(s) | 1972 |
| ApaLI | GTGCAC | 2 cut(s) | 526, 2314 |
| ApoI | RAATTY | 5 cut(s) | 941, 1856, 2000, 2135, 2978 |
| AspLEI | GCGC | 4 cut(s) | 320, 1078, 1225, 1599 |
| AsuC2I | CCSGG | 2 cut(s) | 50, 403 |
| AsuHPI | GGTGA | 6 cut(s) | 469, 493, 517, 757, 904, 2364 |
| AsuII | TTCGAA | 2 cut(s) | 683, 3041 |
| AvaI | CYCGRG | 3 cut(s) | 1058, 1849, 2251 |
| BaeGI | GKGCMC | 3 cut(s) | 530, 1972, 2318 |
| BalI | TGGCCA | 1 cut(s) | 1544 |
| BanII | GRGCYC | 9 cut(s) | 875, 1436, 1487, 1766, 1817, 1972, 2096, 2531, 2560 |
| BauI | CACGAG | 1 cut(s) | 1186 |
| BbsI | GAAGAC | 4 cut(s) | 426, 515, 1005, 1614 |
| Bbv12I | GWGCWC | 6 cut(s) | 256, 530, 1817, 2096, 2318, 2531 |
| BbvCI | CCTCAGC | 1 cut(s) | 93 |
| BccI | CCATC | 6 cut(s) | 149, 1621, 2063, 2377, 2439, 2656 |
| BceAI | ACGGC | 2 cut(s) | 48, 2334 |
| BciT130I | CCWGG | 4 cut(s) | 995, 1641, 2598, 2933 |
| BcnI | CCSGG | 2 cut(s) | 50, 403 |
| BcoDI | GTCTC | 4 cut(s) | 217, 223, 2777, 2991 |
| BfaI | CTAG | 2 cut(s) | 89, 791 |
| BfmI | CTRYAG | 2 cut(s) | 1437, 2533 |
| BfoI | RGCGCY | 2 cut(s) | 1079, 1226 |
| BfuAI | ACCTGC | 3 cut(s) | 158, 1842, 2383 |
| BlpI | GCTNAGC | 3 cut(s) | 861, 1422, 1752 |
| Bme1390I | CCNGG | 6 cut(s) | 50, 403, 995, 1641, 2598, 2933 |
| BmeT110I | CYCGRG | 3 cut(s) | 1058, 1849, 2251 |
| BmgBI | CACGTC | 1 cut(s) | 130 |
| BmrFI | CCNGG | 6 cut(s) | 50, 403, 995, 1641, 2598, 2933 |
| BmsI | GCATC | 3 cut(s) | 918, 1778, 1794 |
| BpiI | GAAGAC | 4 cut(s) | 426, 515, 1005, 1614 |
| BpmI | CTGGAG | 1 cut(s) | 1259 |
| Bpu10I | CCTNAGC | 2 cut(s) | 93, 2966 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 861, 1422, 1752 |
| Bpu14I | TTCGAA | 2 cut(s) | 683, 3041 |
| BpuEI | CTTGAG | 4 cut(s) | 902, 1226, 1994, 3046 |
| BpuMI | CCSGG | 2 cut(s) | 50, 403 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2543 |
| BsaI | GGTCTC | 3 cut(s) | 217, 2777, 2991 |
| BsaWI | WCCGGW | 2 cut(s) | 208, 2413 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 535, 565 |
| Bse118I | RCCGGY | 4 cut(s) | 32, 1369, 1699, 2321 |
| Bse1I | ACTGG | 4 cut(s) | 15, 1873, 2364, 2856 |
| Bse3DI | GCAATG | 7 cut(s) | 855, 1496, 1611, 1746, 2639, 2748, 2767 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2543 |
| BseBI | CCWGG | 4 cut(s) | 995, 1641, 2598, 2933 |
| BseGI | GGATG | 3 cut(s) | 289, 1032, 2667 |
| BseJI | GATNNNNATC | 1 cut(s) | 2543 |
| BseMI | GCAATG | 7 cut(s) | 855, 1496, 1611, 1746, 2639, 2748, 2767 |
| BseMII | CTCAG | 8 cut(s) | 84, 852, 938, 1023, 1413, 1737, 1743, 2892 |
| BseNI | ACTGG | 4 cut(s) | 15, 1873, 2364, 2856 |
| BseRI | GAGGAG | 3 cut(s) | 179, 258, 1807 |
| BseSI | GKGCMC | 3 cut(s) | 530, 1972, 2318 |
| BseX3I | CGGCCG | 1 cut(s) | 2319 |
| BseYI | CCCAGC | 1 cut(s) | 59 |
| BsgI | GTGCAG | 2 cut(s) | 455, 1820 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2322 |
| BsiEI | CGRYCG | 1 cut(s) | 2322 |
| BsiHKAI | GWGCWC | 6 cut(s) | 256, 530, 1817, 2096, 2318, 2531 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1058, 1849, 2251 |
| BsmAI | GTCTC | 4 cut(s) | 217, 223, 2777, 2991 |
| BsmI | GAATGC | 3 cut(s) | 679, 1399, 3037 |
| Bso31I | GGTCTC | 3 cut(s) | 217, 2777, 2991 |
| BsoBI | CYCGRG | 3 cut(s) | 1058, 1849, 2251 |
| Bsp119I | TTCGAA | 2 cut(s) | 683, 3041 |
| Bsp120I | GGGCCC | 1 cut(s) | 1968 |
| Bsp1407I | TGTACA | 1 cut(s) | 2828 |
| Bsp143I | GATC | 2 cut(s) | 708, 2986 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 861, 1422, 1752 |
| BspCNI | CTCAG | 8 cut(s) | 85, 853, 939, 1022, 1414, 1736, 1744, 2893 |
| BspHI | TCATGA | 7 cut(s) | 1038, 1344, 1674, 1809, 1953, 2088, 2523 |
| BspMAI | CTGCAG | 1 cut(s) | 2537 |
| BspMI | ACCTGC | 3 cut(s) | 158, 1842, 2383 |
| BspPI | GGATC | 1 cut(s) | 2994 |
| BspQI | GCTCTTC | 2 cut(s) | 96, 455 |
| BspT104I | TTCGAA | 2 cut(s) | 683, 3041 |
| BspTNI | GGTCTC | 3 cut(s) | 217, 2777, 2991 |
| BsrBI | CCGCTC | 1 cut(s) | 3003 |
| BsrDI | GCAATG | 7 cut(s) | 855, 1496, 1611, 1746, 2639, 2748, 2767 |
| BsrFI | RCCGGY | 4 cut(s) | 32, 1369, 1699, 2321 |
| BsrGI | TGTACA | 1 cut(s) | 2828 |
| BsrI | ACTGG | 4 cut(s) | 15, 1873, 2364, 2856 |
| BssAI | RCCGGY | 4 cut(s) | 32, 1369, 1699, 2321 |
| BssMI | GATC | 2 cut(s) | 708, 2986 |
| BssSI | CACGAG | 1 cut(s) | 1186 |
| BssT1I | CCWWGG | 5 cut(s) | 363, 574, 1507, 2272, 2809 |
| Bst2BI | CACGAG | 1 cut(s) | 1186 |
| Bst2UI | CCWGG | 4 cut(s) | 995, 1641, 2598, 2933 |
| Bst6I | CTCTTC | 5 cut(s) | 96, 296, 455, 2418, 2775 |
| BstAUI | TGTACA | 1 cut(s) | 2828 |
| BstBI | TTCGAA | 2 cut(s) | 683, 3041 |
| BstDSI | CCRYGG | 1 cut(s) | 2379 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 92 |
| BstF5I | GGATG | 3 cut(s) | 289, 1032, 2667 |
| BstH2I | RGCGCY | 2 cut(s) | 1079, 1226 |
| BstHHI | GCGC | 4 cut(s) | 320, 1078, 1225, 1599 |
| BstKTI | GATC | 2 cut(s) | 711, 2989 |
| BstMAI | GTCTC | 4 cut(s) | 217, 223, 2777, 2991 |
| BstMBI | GATC | 2 cut(s) | 708, 2986 |
| BstMCI | CGRYCG | 1 cut(s) | 2322 |
| BstNI | CCWGG | 4 cut(s) | 995, 1641, 2598, 2933 |
| BstNSI | RCATGY | 3 cut(s) | 157, 814, 2961 |
| BstSCI | CCNGG | 6 cut(s) | 48, 401, 993, 1639, 2596, 2931 |
| BstSFI | CTRYAG | 2 cut(s) | 1437, 2533 |
| BstSLI | GKGCMC | 3 cut(s) | 530, 1972, 2318 |
| BstV2I | GAAGAC | 4 cut(s) | 426, 515, 1005, 1614 |
| BstX2I | RGATCY | 1 cut(s) | 2986 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1469, 2234, 2894 |
| BstYI | RGATCY | 1 cut(s) | 2986 |
| BstZI | CGGCCG | 1 cut(s) | 2319 |
| BtgI | CCRYGG | 1 cut(s) | 2379 |
| BtrI | CACGTC | 1 cut(s) | 130 |
| BtsCI | GGATG | 3 cut(s) | 289, 1032, 2667 |
| BtsI | GCAGTG | 7 cut(s) | 254, 783, 1002, 1638, 1665, 2049, 2196 |
| BveI | ACCTGC | 3 cut(s) | 158, 1842, 2383 |
| CaiI | CAGNNNCTG | 4 cut(s) | 589, 961, 1105, 2155 |
| CciI | TCATGA | 7 cut(s) | 1038, 1344, 1674, 1809, 1953, 2088, 2523 |
| CfoI | GCGC | 4 cut(s) | 320, 1078, 1225, 1599 |
| Cfr10I | RCCGGY | 4 cut(s) | 32, 1369, 1699, 2321 |
| CseI | GACGC | 1 cut(s) | 1726 |
| Csp6I | GTAC | 5 cut(s) | 613, 1549, 1710, 2829, 2974 |
| CviQI | GTAC | 5 cut(s) | 613, 1549, 1710, 2829, 2974 |
| DpnI | GATC | 2 cut(s) | 710, 2988 |
| DpnII | GATC | 2 cut(s) | 708, 2986 |
| DraIII | CACNNNGTG | 1 cut(s) | 536 |
| EaeI | YGGCCR | 6 cut(s) | 30, 138, 350, 1542, 2319, 2323 |
| EagI | CGGCCG | 1 cut(s) | 2319 |
| Eam1104I | CTCTTC | 5 cut(s) | 96, 296, 455, 2418, 2775 |
| EarI | CTCTTC | 5 cut(s) | 96, 296, 455, 2418, 2775 |
| EciI | GGCGGA | 3 cut(s) | 1576, 1851, 2674 |
| Ecl136II | GAGCTC | 3 cut(s) | 1815, 2094, 2529 |
| EclXI | CGGCCG | 1 cut(s) | 2319 |
| Eco130I | CCWWGG | 5 cut(s) | 363, 574, 1507, 2272, 2809 |
| Eco24I | GRGCYC | 9 cut(s) | 875, 1436, 1487, 1766, 1817, 1972, 2096, 2531, 2560 |
| Eco31I | GGTCTC | 3 cut(s) | 217, 2777, 2991 |
| Eco52I | CGGCCG | 1 cut(s) | 2319 |
| Eco53kI | GAGCTC | 3 cut(s) | 1815, 2094, 2529 |
| Eco57I | CTGAAG | 3 cut(s) | 438, 2799, 2883 |
| Eco88I | CYCGRG | 3 cut(s) | 1058, 1849, 2251 |
| EcoICRI | GAGCTC | 3 cut(s) | 1815, 2094, 2529 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 92 |
| EcoRII | CCWGG | 4 cut(s) | 993, 1639, 2596, 2931 |
| EcoT14I | CCWWGG | 5 cut(s) | 363, 574, 1507, 2272, 2809 |
| EcoT22I | ATGCAT | 1 cut(s) | 2959 |
| EcoT38I | GRGCYC | 9 cut(s) | 875, 1436, 1487, 1766, 1817, 1972, 2096, 2531, 2560 |
| ErhI | CCWWGG | 5 cut(s) | 363, 574, 1507, 2272, 2809 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1561, 1593 |
| FauI | CCCGC | 4 cut(s) | 320, 1494, 2765, 2919 |
| FauNDI | CATATG | 1 cut(s) | 1523 |
| FokI | GGATG | 3 cut(s) | 296, 1019, 2674 |
| FriOI | GRGCYC | 9 cut(s) | 875, 1436, 1487, 1766, 1817, 1972, 2096, 2531, 2560 |
| FseI | GGCCGGCC | 2 cut(s) | 36, 2325 |
| FspBI | CTAG | 2 cut(s) | 89, 791 |
| FspI | TGCGCA | 1 cut(s) | 319 |
| GlaI | GCGC | 4 cut(s) | 319, 1077, 1224, 1598 |
| GsaI | CCCAGC | 1 cut(s) | 63 |
| GsuI | CTGGAG | 1 cut(s) | 1259 |
| HaeII | RGCGCY | 2 cut(s) | 1079, 1226 |
| HgaI | GACGC | 1 cut(s) | 1726 |
| HhaI | GCGC | 4 cut(s) | 320, 1078, 1225, 1599 |
| Hin6I | GCGC | 4 cut(s) | 318, 1076, 1223, 1597 |
| HinP1I | GCGC | 4 cut(s) | 318, 1076, 1223, 1597 |
| HincII | GTYRAC | 1 cut(s) | 1831 |
| HindII | GTYRAC | 1 cut(s) | 1831 |
| HinfI | GANTC | 3 cut(s) | 205, 550, 1361 |
| HphI | GGTGA | 6 cut(s) | 469, 493, 517, 757, 904, 2364 |
| Hpy166II | GTNNAC | 6 cut(s) | 528, 1551, 1831, 2316, 2391, 2746 |
| Hpy188I | TCNGA | 4 cut(s) | 948, 1726, 2675, 2779 |
| Hpy8I | GTNNAC | 6 cut(s) | 528, 1551, 1831, 2316, 2391, 2746 |
| HpyAV | CCTTC | 2 cut(s) | 691, 1351 |
| HpyCH4IV | ACGT | 2 cut(s) | 129, 662 |
| HpySE526I | ACGT | 2 cut(s) | 129, 662 |
| HspAI | GCGC | 4 cut(s) | 318, 1076, 1223, 1597 |
| KflI | GGGWCCC | 5 cut(s) | 359, 569, 1053, 1502, 2666 |
| KroI | GCCGGC | 2 cut(s) | 32, 2321 |
| KroNI | GCCGGC | 2 cut(s) | 34, 2323 |
| Kzo9I | GATC | 2 cut(s) | 708, 2986 |
| LguI | GCTCTTC | 2 cut(s) | 96, 455 |
| LmnI | GCTCC | 9 cut(s) | 166, 251, 835, 952, 1240, 1396, 1820, 1996, 2534 |
| LweI | GCATC | 3 cut(s) | 918, 1778, 1794 |
| MaeI | CTAG | 2 cut(s) | 89, 791 |
| MaeII | ACGT | 2 cut(s) | 129, 662 |
| MaeIII | GTNAC | 9 cut(s) | 6, 331, 449, 497, 968, 1880, 2162, 2737, 3047 |
| MalI | GATC | 2 cut(s) | 710, 2988 |
| MbiI | CCGCTC | 1 cut(s) | 3003 |
| MboI | GATC | 2 cut(s) | 708, 2986 |
| MfeI | CAATTG | 1 cut(s) | 2792 |
| MflI | RGATCY | 1 cut(s) | 2986 |
| MlsI | TGGCCA | 1 cut(s) | 1544 |
| MluNI | TGGCCA | 1 cut(s) | 1544 |
| MlyI | GAGTC | 2 cut(s) | 544, 1355 |
| MmeI | TCCRAC | 3 cut(s) | 144, 2332, 2596 |
| Mox20I | TGGCCA | 1 cut(s) | 1544 |
| Mph1103I | ATGCAT | 1 cut(s) | 2959 |
| MroNI | GCCGGC | 2 cut(s) | 32, 2321 |
| MscI | TGGCCA | 1 cut(s) | 1544 |
| MseI | TTAA | 7 cut(s) | 228, 444, 468, 492, 516, 1020, 2850 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1037, 1343, 2087, 2298 |
| Msp20I | TGGCCA | 1 cut(s) | 1544 |
| MspA1I | CMGCKG | 3 cut(s) | 961, 1105, 2155 |
| MspR9I | CCNGG | 6 cut(s) | 50, 403, 995, 1641, 2598, 2933 |
| MunI | CAATTG | 1 cut(s) | 2792 |
| Mva1269I | GAATGC | 3 cut(s) | 679, 1399, 3037 |
| MvaI | CCWGG | 4 cut(s) | 995, 1641, 2598, 2933 |
| NaeI | GCCGGC | 2 cut(s) | 34, 2323 |
| NciI | CCSGG | 2 cut(s) | 50, 403 |
| NdeI | CATATG | 1 cut(s) | 1523 |
| NdeII | GATC | 2 cut(s) | 708, 2986 |
| NgoMIV | GCCGGC | 2 cut(s) | 32, 2321 |
| NmeAIII | GCCGAG | 4 cut(s) | 220, 291, 2491, 3020 |
| NmuCI | GTSAC | 4 cut(s) | 6, 449, 497, 1880 |
| NsbI | TGCGCA | 1 cut(s) | 319 |
| NsiI | ATGCAT | 1 cut(s) | 2959 |
| NspI | RCATGY | 3 cut(s) | 157, 814, 2961 |
| NspV | TTCGAA | 2 cut(s) | 683, 3041 |
| PaeI | GCATGC | 1 cut(s) | 157 |
| PaeR7I | CTCGAG | 1 cut(s) | 1058 |
| PagI | TCATGA | 7 cut(s) | 1038, 1344, 1674, 1809, 1953, 2088, 2523 |
| PaqCI | CACCTGC | 1 cut(s) | 2383 |
| PasI | CCCWGGG | 1 cut(s) | 2932 |
| PciI | ACATGT | 1 cut(s) | 810 |
| PciSI | GCTCTTC | 2 cut(s) | 96, 455 |
| PctI | GAATGC | 3 cut(s) | 679, 1399, 3037 |
| PdiI | GCCGGC | 2 cut(s) | 34, 2323 |
| PfeI | GAWTC | 1 cut(s) | 205 |
| PleI | GAGTC | 2 cut(s) | 544, 1355 |
| PpsI | GAGTC | 2 cut(s) | 544, 1355 |
| PpuMI | RGGWCCY | 8 cut(s) | 359, 569, 1053, 1502, 1959, 2569, 2666, 2927 |
| PscI | ACATGT | 1 cut(s) | 810 |
| PsiI | TTATAA | 1 cut(s) | 1071 |
| Psp124BI | GAGCTC | 3 cut(s) | 1817, 2096, 2531 |
| Psp5II | RGGWCCY | 8 cut(s) | 359, 569, 1053, 1502, 1959, 2569, 2666, 2927 |
| Psp6I | CCWGG | 4 cut(s) | 993, 1639, 2596, 2931 |
| PspFI | CCCAGC | 1 cut(s) | 59 |
| PspGI | CCWGG | 4 cut(s) | 993, 1639, 2596, 2931 |
| PspOMI | GGGCCC | 1 cut(s) | 1968 |
| PspPPI | RGGWCCY | 8 cut(s) | 359, 569, 1053, 1502, 1959, 2569, 2666, 2927 |
| PspXI | VCTCGAGB | 1 cut(s) | 1058 |
| PstI | CTGCAG | 1 cut(s) | 2537 |
| PstNI | CAGNNNCTG | 4 cut(s) | 589, 961, 1105, 2155 |
| PsuI | RGATCY | 1 cut(s) | 2986 |
| PvuII | CAGCTG | 3 cut(s) | 961, 1105, 2155 |
| RigI | GGCCGGCC | 2 cut(s) | 36, 2325 |
| RsaI | GTAC | 5 cut(s) | 614, 1550, 1711, 2830, 2975 |
| RsaNI | GTAC | 5 cut(s) | 613, 1549, 1710, 2829, 2974 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1037, 1343, 2087, 2298 |
| SacI | GAGCTC | 3 cut(s) | 1817, 2096, 2531 |
| SapI | GCTCTTC | 2 cut(s) | 96, 455 |
| SaqAI | TTAA | 7 cut(s) | 228, 444, 468, 492, 516, 1020, 2850 |
| Sau3AI | GATC | 2 cut(s) | 708, 2986 |
| SbfI | CCTGCAGG | 1 cut(s) | 2537 |
| SchI | GAGTC | 2 cut(s) | 544, 1355 |
| ScrFI | CCNGG | 6 cut(s) | 50, 403, 995, 1641, 2598, 2933 |
| SdaI | CCTGCAGG | 1 cut(s) | 2537 |
| SfaNI | GCATC | 3 cut(s) | 918, 1778, 1794 |
| SfcI | CTRYAG | 2 cut(s) | 1437, 2533 |
| Sfr274I | CTCGAG | 1 cut(s) | 1058 |
| SfuI | TTCGAA | 2 cut(s) | 683, 3041 |
| SlaI | CTCGAG | 1 cut(s) | 1058 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1037, 1343, 2087, 2298 |
| SmlI | CTYRAG | 5 cut(s) | 917, 1058, 1205, 1973, 3025 |
| SmoI | CTYRAG | 5 cut(s) | 917, 1058, 1205, 1973, 3025 |
| SphI | GCATGC | 1 cut(s) | 157 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2537 |
| SspMI | CTAG | 2 cut(s) | 89, 791 |
| SstI | GAGCTC | 3 cut(s) | 1817, 2096, 2531 |
| StyD4I | CCNGG | 6 cut(s) | 48, 401, 993, 1639, 2596, 2931 |
| StyI | CCWWGG | 5 cut(s) | 363, 574, 1507, 2272, 2809 |
| TaiI | ACGT | 2 cut(s) | 132, 665 |
| TaqI | TCGA | 6 cut(s) | 144, 683, 1059, 1377, 1715, 3041 |
| TatI | WGTACW | 2 cut(s) | 1548, 2828 |
| TauI | GCSGC | 5 cut(s) | 409, 779, 1213, 1867, 2736 |
| TfiI | GAWTC | 1 cut(s) | 205 |
| Tru1I | TTAA | 7 cut(s) | 228, 444, 468, 492, 516, 1020, 2850 |
| Tru9I | TTAA | 7 cut(s) | 228, 444, 468, 492, 516, 1020, 2850 |
| TseFI | GTSAC | 4 cut(s) | 6, 449, 497, 1880 |
| Tsp45I | GTSAC | 4 cut(s) | 6, 449, 497, 1880 |
| TspDTI | ATGAA | 5 cut(s) | 815, 1172, 1316, 1361, 1691 |
| TspGWI | ACGGA | 2 cut(s) | 176, 2564 |
| VneI | GTGCAC | 2 cut(s) | 526, 2314 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 92 |
| XapI | RAATTY | 5 cut(s) | 941, 1856, 2000, 2135, 2978 |
| XceI | RCATGY | 3 cut(s) | 157, 814, 2961 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1306, 2174, 2863 |
| XhoI | CTCGAG | 1 cut(s) | 1058 |
| XspI | CTAG | 2 cut(s) | 89, 791 |
| Zsp2I | ATGCAT | 1 cut(s) | 2959 |